Metagenome / Metatranscriptome Family F044707

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F044707
Family Type	Metagenome / Metatranscriptome
Number of Sequences	154
Average Sequence Length	63 residues
Representative Sequence	MIYFLALLPATALTIAGYFVLFLSARSEGALRTFGKYLGFWAFTLAGLLILGAIFAAAHG
Number of Associated Samples	136
Number of Associated Scaffolds	154

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	81.51 %
% of genes near scaffold ends (potentially truncated)	90.91 %
% of genes from short scaffolds (< 2000 bps)	81.82 %
Associated GOLD sequencing projects	133
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.75

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (87.013 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (37.662 % of family members)
Environment Ontology (ENVO)	Unclassified (35.065 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.857 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 61.36% β-sheet: 0.00% Coil/Unstructured: 38.64%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.75
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.75
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
f.63.1.1: Claudin	d3jbre_	3jbr	0.8685
f.63.1.1: Claudin	d3x29a_	3x29	0.86016
f.25.1.1: Cytochrome c oxidase subunit III-like	d7cohc_	7coh	0.85291
f.24.1.1: Cytochrome c oxidase subunit I-like	d7coha_	7coh	0.84546
a.25.1.1: Ferritin	d1moja_	1moj	0.84513

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 154 Family Scaffolds
PF00563	EAL	16.23
PF08448	PAS_4	5.84
PF04357	TamB	3.25
PF00990	GGDEF	3.25
PF01431	Peptidase_M13	1.95
PF11769	DUF3313	1.95
PF13450	NAD_binding_8	1.30
PF02738	MoCoBD_1	1.30
PF04371	PAD_porph	1.30
PF00196	GerE	1.30
PF13649	Methyltransf_25	0.65
PF11999	Ice_binding	0.65
PF05649	Peptidase_M13_N	0.65
PF13404	HTH_AsnC-type	0.65
PF07690	MFS_1	0.65
PF04028	DUF374	0.65
PF01244	Peptidase_M19	0.65
PF13442	Cytochrome_CBB3	0.65
PF01182	Glucosamine_iso	0.65
PF10604	Polyketide_cyc2	0.65
PF00326	Peptidase_S9	0.65
PF01425	Amidase	0.65
PF13419	HAD_2	0.65
PF10282	Lactonase	0.65
PF00144	Beta-lactamase	0.65
PF09830	ATP_transf	0.65
PF04191	PEMT	0.65
PF00486	Trans_reg_C	0.65
PF02036	SCP2	0.65
PF13602	ADH_zinc_N_2	0.65
PF05721	PhyH	0.65
PF04430	DUF498	0.65
PF00199	Catalase	0.65
PF13426	PAS_9	0.65
PF01037	AsnC_trans_reg	0.65
PF00120	Gln-synt_C	0.65
PF00072	Response_reg	0.65

COG ID	Name	Functional Category	% Frequency in 154 Family Scaffolds
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	16.23
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	16.23
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	16.23
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	16.23
COG2911	Phospholipid transport to the outer membrane protein TamB	Cell wall/membrane/envelope biogenesis [M]	3.25
COG3590	Predicted metalloendopeptidase	Posttranslational modification, protein turnover, chaperones [O]	2.60
COG2957	Agmatine/peptidylarginine deiminase	Amino acid transport and metabolism [E]	1.30
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.65
COG5285	Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.65
COG3737	Uncharacterized protein, contains Mth938-like domain	Function unknown [S]	0.65
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.65
COG2355	Zn-dependent dipeptidase, microsomal dipeptidase homolog	Posttranslational modification, protein turnover, chaperones [O]	0.65
COG2121	Uncharacterized conserved protein, lysophospholipid acyltransferase (LPLAT) superfamily	Function unknown [S]	0.65
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.65
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.65
COG1504	Uncharacterized conserved protein, DUF498 domain	Function unknown [S]	0.65
COG0753	Catalase	Inorganic ion transport and metabolism [P]	0.65
COG0363	6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase	Carbohydrate transport and metabolism [G]	0.65

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	87.01 %
Unclassified	root	N/A	12.99 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	87.01 %
Unclassified	root	N/A	12.99 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	87.01 %
Unclassified	root	N/A	12.99 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	50.00 %
Unclassified	root	N/A	12.99 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	1.30 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.30 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.65 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	14.94 %
Unclassified	root	N/A	12.99 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5.19 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.25 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1.30 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.30 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.99 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	7.14 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	1.30 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	1.30 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.30 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	1.95 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.65 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.65 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.65 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.99 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	7.14 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.30 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.30 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.30 %
unclassified Xanthomonadales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales	0.65 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.65 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.65 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.65 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.99 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	7.14 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.30 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.30 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.30 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	0.65 %
Phenylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	0.65 %
Acidisphaera	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera	0.65 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.65 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.99 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	7.14 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.30 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.30 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.30 %
unclassified Acidisphaera	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera	0.65 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	0.65 %
Phenylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	0.65 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.65 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.99 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	7.14 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.30 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.30 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.30 %
Acidisphaera sp. S103	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera → Acidisphaera sp. S103	0.65 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	0.65 %
Phenylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	0.65 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.65 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.65 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2065487018\|GPINP_F5MS3JC02HQEQF	All Organisms → cellular organisms → Bacteria → Proteobacteria	517	Open in IMG/M
3300001593\|JGI12635J15846_10449616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera → Acidisphaera sp. S103	768	Open in IMG/M
3300001867\|JGI12627J18819_10210261	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300002915\|JGI25387J43893_1043377	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300004152\|Ga0062386_101695858	All Organisms → cellular organisms → Bacteria → Proteobacteria	527	Open in IMG/M
3300004635\|Ga0062388_100684864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	954	Open in IMG/M
3300005439\|Ga0070711_101415302	All Organisms → cellular organisms → Bacteria → Proteobacteria	605	Open in IMG/M
3300005454\|Ga0066687_10073332	All Organisms → cellular organisms → Bacteria	1663	Open in IMG/M
3300005552\|Ga0066701_10884912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	530	Open in IMG/M
3300005553\|Ga0066695_10040022	All Organisms → cellular organisms → Bacteria → Proteobacteria	2753	Open in IMG/M
3300005944\|Ga0066788_10027577	All Organisms → cellular organisms → Bacteria → Proteobacteria	1283	Open in IMG/M
3300006032\|Ga0066696_10822282	Not Available	592	Open in IMG/M
3300006052\|Ga0075029_100042948	All Organisms → cellular organisms → Bacteria → Proteobacteria	2600	Open in IMG/M
3300006102\|Ga0075015_100703318	Not Available	600	Open in IMG/M
3300006162\|Ga0075030_101555933	All Organisms → cellular organisms → Bacteria → Proteobacteria	517	Open in IMG/M
3300006172\|Ga0075018_10121318	Not Available	1181	Open in IMG/M
3300006172\|Ga0075018_10229306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	891	Open in IMG/M
3300009089\|Ga0099828_11239569	All Organisms → cellular organisms → Bacteria → Proteobacteria	661	Open in IMG/M
3300009522\|Ga0116218_1235962	Not Available	822	Open in IMG/M
3300009665\|Ga0116135_1174725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	811	Open in IMG/M
3300009700\|Ga0116217_10570552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	706	Open in IMG/M
3300009792\|Ga0126374_10733328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	747	Open in IMG/M
3300010341\|Ga0074045_10483965	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	796	Open in IMG/M
3300010341\|Ga0074045_10956556	All Organisms → cellular organisms → Bacteria → Proteobacteria	540	Open in IMG/M
3300010343\|Ga0074044_11125819	All Organisms → cellular organisms → Bacteria → Proteobacteria	513	Open in IMG/M
3300010376\|Ga0126381_103201125	All Organisms → cellular organisms → Bacteria → Proteobacteria	647	Open in IMG/M
3300010398\|Ga0126383_12345216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	619	Open in IMG/M
3300011271\|Ga0137393_10068546	All Organisms → cellular organisms → Bacteria	2823	Open in IMG/M
3300012198\|Ga0137364_11290021	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300012205\|Ga0137362_10611360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	939	Open in IMG/M
3300012362\|Ga0137361_10324383	All Organisms → cellular organisms → Bacteria → Proteobacteria	1411	Open in IMG/M
3300012917\|Ga0137395_10857642	All Organisms → cellular organisms → Bacteria → Proteobacteria	658	Open in IMG/M
3300012923\|Ga0137359_10512608	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1057	Open in IMG/M
3300012948\|Ga0126375_11401983	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300012986\|Ga0164304_11100504	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	636	Open in IMG/M
3300014150\|Ga0134081_10051135	All Organisms → cellular organisms → Bacteria	1235	Open in IMG/M
3300014159\|Ga0181530_10457248	All Organisms → cellular organisms → Bacteria → Proteobacteria	642	Open in IMG/M
3300014166\|Ga0134079_10649479	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300014201\|Ga0181537_10967841	All Organisms → cellular organisms → Bacteria → Proteobacteria	576	Open in IMG/M
3300014489\|Ga0182018_10395082	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300014657\|Ga0181522_10616237	All Organisms → cellular organisms → Bacteria → Proteobacteria	659	Open in IMG/M
3300015241\|Ga0137418_10015251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	7100	Open in IMG/M
3300016319\|Ga0182033_10319725	All Organisms → cellular organisms → Bacteria	1287	Open in IMG/M
3300016319\|Ga0182033_11580930	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300016404\|Ga0182037_11987410	All Organisms → cellular organisms → Bacteria → Proteobacteria	522	Open in IMG/M
3300016702\|Ga0181511_1444752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	712	Open in IMG/M
3300017927\|Ga0187824_10175920	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300017943\|Ga0187819_10115588	All Organisms → cellular organisms → Bacteria → Proteobacteria	1602	Open in IMG/M
3300017973\|Ga0187780_11033020	Not Available	599	Open in IMG/M
3300018088\|Ga0187771_11653317	All Organisms → cellular organisms → Bacteria → Proteobacteria	544	Open in IMG/M
3300021088\|Ga0210404_10410108	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300021170\|Ga0210400_11177414	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300021178\|Ga0210408_10046150	All Organisms → cellular organisms → Bacteria	3411	Open in IMG/M
3300021178\|Ga0210408_11465639	All Organisms → cellular organisms → Bacteria → Proteobacteria	512	Open in IMG/M
3300021433\|Ga0210391_10633921	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300021474\|Ga0210390_11504444	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300021477\|Ga0210398_10033356	All Organisms → cellular organisms → Bacteria → Proteobacteria	4302	Open in IMG/M
3300021479\|Ga0210410_10704612	All Organisms → cellular organisms → Bacteria → Proteobacteria	891	Open in IMG/M
3300021479\|Ga0210410_11363631	All Organisms → cellular organisms → Bacteria → Proteobacteria	602	Open in IMG/M
3300021560\|Ga0126371_11069837	All Organisms → cellular organisms → Bacteria	947	Open in IMG/M
3300021861\|Ga0213853_11290912	All Organisms → cellular organisms → Bacteria → Proteobacteria	1395	Open in IMG/M
3300023255\|Ga0224547_1012736	Not Available	1065	Open in IMG/M
3300025929\|Ga0207664_10097258	All Organisms → cellular organisms → Bacteria → Proteobacteria	2425	Open in IMG/M
3300025942\|Ga0207689_10758402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	819	Open in IMG/M
3300026291\|Ga0209890_10238580	All Organisms → cellular organisms → Bacteria → Proteobacteria	569	Open in IMG/M
3300026333\|Ga0209158_1288119	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300026343\|Ga0209159_1187567	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300026540\|Ga0209376_1376429	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300026551\|Ga0209648_10141175	All Organisms → cellular organisms → Bacteria	1915	Open in IMG/M
3300026555\|Ga0179593_1242936	All Organisms → cellular organisms → Bacteria	3076	Open in IMG/M
3300027330\|Ga0207777_1089705	All Organisms → cellular organisms → Bacteria → Proteobacteria	532	Open in IMG/M
3300027432\|Ga0209421_1060730	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300027667\|Ga0209009_1056768	All Organisms → cellular organisms → Bacteria	980	Open in IMG/M
3300027703\|Ga0207862_1130764	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	753	Open in IMG/M
3300027727\|Ga0209328_10241818	All Organisms → cellular organisms → Bacteria → Proteobacteria	540	Open in IMG/M
3300027879\|Ga0209169_10362880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	762	Open in IMG/M
3300027889\|Ga0209380_10021780	Not Available	3626	Open in IMG/M
3300027889\|Ga0209380_10691541	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300027894\|Ga0209068_10203200	Not Available	1090	Open in IMG/M
3300027894\|Ga0209068_10833177	Not Available	544	Open in IMG/M
3300027895\|Ga0209624_10307837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	1055	Open in IMG/M
3300027895\|Ga0209624_10312594	Not Available	1046	Open in IMG/M
3300028047\|Ga0209526_10125031	All Organisms → cellular organisms → Bacteria → Proteobacteria	1806	Open in IMG/M
3300028806\|Ga0302221_10542623	All Organisms → cellular organisms → Bacteria → Proteobacteria	507	Open in IMG/M
3300030053\|Ga0302177_10067716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	2121	Open in IMG/M
3300030053\|Ga0302177_10507730	All Organisms → cellular organisms → Bacteria → Proteobacteria	623	Open in IMG/M
3300030490\|Ga0302184_10190854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	866	Open in IMG/M
3300030503\|Ga0311370_10641096	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1262	Open in IMG/M
3300030509\|Ga0302183_10006595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5131	Open in IMG/M
3300030617\|Ga0311356_10588865	All Organisms → cellular organisms → Bacteria	1077	Open in IMG/M
3300030707\|Ga0310038_10318215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	697	Open in IMG/M
3300031027\|Ga0302308_10622511	All Organisms → cellular organisms → Bacteria → Proteobacteria	620	Open in IMG/M
3300031027\|Ga0302308_10642664	All Organisms → cellular organisms → Bacteria → Proteobacteria	608	Open in IMG/M
3300031234\|Ga0302325_11494109	Not Available	871	Open in IMG/M
3300031446\|Ga0170820_10665387	All Organisms → cellular organisms → Bacteria → Proteobacteria	553	Open in IMG/M
3300031543\|Ga0318516_10049345	All Organisms → cellular organisms → Bacteria	2285	Open in IMG/M
3300031545\|Ga0318541_10845433	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300031546\|Ga0318538_10778443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	519	Open in IMG/M
3300031564\|Ga0318573_10226468	All Organisms → cellular organisms → Bacteria	994	Open in IMG/M
3300031640\|Ga0318555_10327490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	829	Open in IMG/M
3300031668\|Ga0318542_10188355	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1038	Open in IMG/M
3300031680\|Ga0318574_10044465	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2313	Open in IMG/M
3300031682\|Ga0318560_10008491	All Organisms → cellular organisms → Bacteria → Proteobacteria	4329	Open in IMG/M
3300031708\|Ga0310686_118137354	All Organisms → cellular organisms → Bacteria → Proteobacteria	606	Open in IMG/M
3300031713\|Ga0318496_10787236	All Organisms → cellular organisms → Bacteria → Proteobacteria	524	Open in IMG/M
3300031719\|Ga0306917_10869164	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300031736\|Ga0318501_10562893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	624	Open in IMG/M
3300031744\|Ga0306918_10023878	All Organisms → cellular organisms → Bacteria	3757	Open in IMG/M
3300031747\|Ga0318502_10308166	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	932	Open in IMG/M
3300031763\|Ga0318537_10096051	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1097	Open in IMG/M
3300031770\|Ga0318521_10244196	All Organisms → cellular organisms → Bacteria	1046	Open in IMG/M
3300031771\|Ga0318546_10551551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	810	Open in IMG/M
3300031778\|Ga0318498_10227070	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	844	Open in IMG/M
3300031780\|Ga0318508_1016141	All Organisms → cellular organisms → Bacteria	1763	Open in IMG/M
3300031796\|Ga0318576_10138090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1133	Open in IMG/M
3300031797\|Ga0318550_10593505	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300031798\|Ga0318523_10449916	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300031805\|Ga0318497_10019741	All Organisms → cellular organisms → Bacteria	3256	Open in IMG/M
3300031805\|Ga0318497_10112529	All Organisms → cellular organisms → Bacteria	1468	Open in IMG/M
3300031805\|Ga0318497_10396909	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	771	Open in IMG/M
3300031831\|Ga0318564_10315109	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300031832\|Ga0318499_10008937	All Organisms → cellular organisms → Bacteria	3187	Open in IMG/M
3300031835\|Ga0318517_10212131	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300031859\|Ga0318527_10354301	All Organisms → cellular organisms → Bacteria → Proteobacteria	625	Open in IMG/M
3300031859\|Ga0318527_10471938	All Organisms → cellular organisms → Bacteria → Proteobacteria	535	Open in IMG/M
3300031860\|Ga0318495_10482206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	542	Open in IMG/M
3300031890\|Ga0306925_10213902	All Organisms → cellular organisms → Bacteria	2079	Open in IMG/M
3300031893\|Ga0318536_10566141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	569	Open in IMG/M
3300031897\|Ga0318520_10864816	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	568	Open in IMG/M
3300031902\|Ga0302322_103415821	Not Available	544	Open in IMG/M
3300031912\|Ga0306921_10147972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2747	Open in IMG/M
3300031945\|Ga0310913_10137737	All Organisms → cellular organisms → Bacteria	1679	Open in IMG/M
3300031959\|Ga0318530_10454636	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300032009\|Ga0318563_10370352	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300032010\|Ga0318569_10074017	All Organisms → cellular organisms → Bacteria	1510	Open in IMG/M
3300032042\|Ga0318545_10307241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	570	Open in IMG/M
3300032042\|Ga0318545_10376903	All Organisms → cellular organisms → Bacteria → Proteobacteria	511	Open in IMG/M
3300032043\|Ga0318556_10247580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	930	Open in IMG/M
3300032059\|Ga0318533_10515225	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300032067\|Ga0318524_10797526	All Organisms → cellular organisms → Bacteria → Proteobacteria	500	Open in IMG/M
3300032068\|Ga0318553_10418932	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300032205\|Ga0307472_100040045	All Organisms → cellular organisms → Bacteria	2821	Open in IMG/M
3300032828\|Ga0335080_11253330	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300032892\|Ga0335081_12371866	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300033289\|Ga0310914_10691752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	915	Open in IMG/M
3300033289\|Ga0310914_10913369	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.35%
Host-Associated	Host-Associated	0.65%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.66%
Aquatic	Environmental → Aquatic	11.69%
Plants	Host-Associated → Plants	0.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.87%
Peat	Environmental → Terrestrial → Peat	7.79%
Freshwater	Environmental → Aquatic → Freshwater	6.49%
Sediment	Environmental → Aquatic → Sediment	5.19%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	63.64%
Loam	Environmental → Terrestrial → Soil → Loam	9.74%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	7.79%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.49%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.84%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.19%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.65%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.65%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	43.51%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.64%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.44%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	7.79%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.49%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.19%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.55%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.90%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.95%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.30%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.30%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.65%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	37.66%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	6.49%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.84%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	5.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.19%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.55%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.25%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.95%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.95%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.95%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.95%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.30%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.30%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.30%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.30%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.30%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.30%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.30%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.30%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.30%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.65%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.65%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.65%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.65%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.65%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.65%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.65%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.65%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.65%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2065487018	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002915	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005944	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016702	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023255	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P2 10-14	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027330	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 35 (SPAdes)	Environmental	Open in IMG/M
3300027432	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028806	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1	Environmental	Open in IMG/M
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental	Open in IMG/M
3300030490	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_3	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030509	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_2	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300031027	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_3	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPINP_03303370	2065487018	Soil	VIFLLVLLPATGLTIAGYFVLYLSSRTDGTLRTFGRYLGFWAFTLAGLLILAALFAAAHFGHHGMAHGSYCP
JGI12635J15846_104496162	3300001593	Forest Soil	MIYFIALIPATALTIAGYFVLYLSNRSEGTFQKFGKYLGFWAFTLTGLVVLGAIFAAAHG
JGI12627J18819_102102611	3300001867	Forest Soil	VIYLLALIPATVLTIAGYVVLVLSTRAEGGLRSFGRYLGFWAFTLAGLVI
JGI25387J43893_10433771	3300002915	Grasslands Soil	MIYFLALLPATALTIAGYFALYLSARSEGALRTFGRYLGFWAFTLAGLVILGSLFAAAHGGRHCPFFAMH
Ga0062386_1016958581	3300004152	Bog Forest Soil	MIYFLALIPATALTIAGYFALYLSNRSEGAFQTFGKYLGFWAFTLAGLVILGAIFAAAHGGRHWHR
Ga0062388_1006848641	3300004635	Bog Forest Soil	MIYLLVLFPATALTIAGYVVLFLSARAEGGMRSFGKYLGFWAFMLAALLILGAIFAAAHGRHRCPFFGMH
Ga0070711_1014153021	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MFYFLALIPATMLTIAGYFVLFLARRSEGALRSFGRYLGFWAFTLAALIVLGAIVAAARGDRMHGMDMHCMPG
Ga0066687_100733321	3300005454	Soil	MIYFLALLPATALTIAGYFVLYLSARSAGSLRTFGRYLGFWAFTLAGLVILGSIFAAAHGHCHCPFFAM
Ga0066701_108849122	3300005552	Soil	MIYFLALLPATALTIAGYFVLYLSARSEGALRTFGRYLGFWAFTLAGLVILGSIFAAAHGHRHC
Ga0066695_100400223	3300005553	Soil	MIYFLALLPATALTIAGYFVLYLSARSEGALRTFGRYLGFWAFTLAGLVILGTLFAAA
Ga0066788_100275771	3300005944	Soil	MIYFLALVPATILTIAGYAVLFLAHRSEGALKSFGRYLGFWAFTLAALVVLGAILAAARGEPMHGMPMPG
Ga0066696_108222821	3300006032	Soil	MIYLLALLPATALAVAGYFVLFLSARSEGALRTFGKYLGFWAFTLAGLVILGAIFAAAHGRHHC
Ga0075028_1005436621	3300006050	Watersheds	MIFLLALLPATMLTVVGYIVLYISGRSEGSFRAFGKYLGFWAFTLAGLVILGALFATHHHHNIGD
Ga0075029_1000429484	3300006052	Watersheds	MIYFLALIPATALTIAGYFVLYLSHRSEGAFKALGKYLGFWAFTLAALVILGAIFAAAHGAHHDGMM
Ga0075015_1007033182	3300006102	Watersheds	MIFFLALIPATMLTMAGYAVIFLANRSEGGLRNFGKYLGFWAFTLAGLLVLGSLLHAAHGGRWHGMMMHGYAGGWE
Ga0075030_1015559331	3300006162	Watersheds	MIYFLALIPATALTIAGYFVLYLSHRSEGAFKALGKYLGFWAFTLAALVILGAIFAAAHGAHHDGMMYGRMHRHW
Ga0075018_101213181	3300006172	Watersheds	MIFLLALLPATMLTVAGYFVQYLANRFEGSFRSFGKYLSFWAFTLAALASV*
Ga0075018_102293061	3300006172	Watersheds	MIFLLALLPATMLTVVGYIVLYISGRSVGSFRAFGKYLGFWAFTLAGLVIL
Ga0099828_112395692	3300009089	Vadose Zone Soil	MIYFLALLPATALTIAGYFVLFLSARSEGALRTFGKYLGFWAFTLAGLLILGAIFAAAHG
Ga0116218_12359621	3300009522	Peatlands Soil	MIYFLALLPATALTIAGYFVLFLSNRSEGALRAFGKYLGFWAFTLAGLVILGAIFAAAH
Ga0116135_11747251	3300009665	Peatland	MLYFLALIPATALTIAGYFALYLSNRSEGTFRSFGKYLGFWAFTLAGLVILGAIFAAAHG
Ga0116217_105705521	3300009700	Peatlands Soil	MIYFLALIPATMLTVAGYFLLFLSNRSEGAFRSFGKYLGFWAFTLAALVILGAIFAAAHGGRH
Ga0126374_107333282	3300009792	Tropical Forest Soil	VIFLLVLLPATGLTIAGYFVLYLSSRTEGALRTFGRYLGFWAFTLAGLLILAALF
Ga0074045_104839652	3300010341	Bog Forest Soil	MIYFLALIPATMLTVAGYFVLYLSNRSEGAFRSFGKYLGFWAFALAALVILGAIFAAAHGGRHH*
Ga0074045_109565561	3300010341	Bog Forest Soil	MIYFLALIPATALTIAGYFALYLSNRSEGAFQTFGKYLGFWAFTLAGLVILGAIFAAAHGGRHWHRDHEGPR
Ga0074044_111258191	3300010343	Bog Forest Soil	MIYFLALIPATMLTVAGYFLLFLSNRSEGAFRSFGKYLGFWAFTLAALVILGAIFAAAHGGRHHCHPMGEQGM
Ga0126381_1032011251	3300010376	Tropical Forest Soil	MIYFVALLPATGLVVGGYVVLFLAGRSEGAFRAFGRYLGFWAFTLAGLVILGA
Ga0126383_123452162	3300010398	Tropical Forest Soil	MPYLLALFPATALTIAGYFVLYLSARSEGSLRTFGKYLGYWAFTLAGLVILGAILAAA
Ga0137393_100685463	3300011271	Vadose Zone Soil	MIYFLALIQATALTIAGYFVLFLSNRSEGAFRTFGKYLGFWAFALAALVVLGAIFAAAHGGHHC
Ga0137364_112900211	3300012198	Vadose Zone Soil	MIYFLALLPATALTIAGYFALYLSARSEGALRTFGRYLGFWAFTLAGLVILGS
Ga0137362_106113602	3300012205	Vadose Zone Soil	MIYFLALLPATVLTIAGYFVLYLSNRSEGAFRTFGKYLGFWAFTLAALVILGAIFAAAHGGHHCPMMGE
Ga0137361_103243833	3300012362	Vadose Zone Soil	MIYFLALLPATVLTIAGYFVLYLSDRSEGAFRTFGKYLGFWAFTLAALVILGAIFAAAHGGHHCPMIGERGMYG
Ga0137395_108576421	3300012917	Vadose Zone Soil	MIYFLALLPATALTIAGYFILYLSNRSEGTFRTFGKYLGFWAFTLAALVILG
Ga0137359_105126082	3300012923	Vadose Zone Soil	VIYFLALIPATVLTIAGYVVLFLSARSEGTLRTFGKYLRFWAFTLAGFVVLGAIFAAAYGHHRCPFVGIHGM*
Ga0126375_114019831	3300012948	Tropical Forest Soil	MVYFLALLPATALTIAGYFVLYLSARSEGSLRSFGRYLGYWAFTLAGLVILGAIF
Ga0164304_111005042	3300012986	Soil	MIFLLVLLPATGLTIAGYFVLYLSSRTDGTLRAFGRYLGFWAFTLAGLLILAALFAAAHYGHH
Ga0134081_100511353	3300014150	Grasslands Soil	MIYFLALLPATALTIAGYFVLYLSARSECALRAFGRYLGFWPFTLAGLVILGSIF
Ga0181530_104572481	3300014159	Bog	MIYFLALIPATALTIAGYFALYLSNRSEGAFRTFGKYLGFWAFTLAGLVVLGAIFAAAH
Ga0134079_106494792	3300014166	Grasslands Soil	MIYFLALLPATALTIAGYFALYLSARSEGALRTFGRYLGFWAFTLAGLVILGSLFAAAHGGRHCPFFAM
Ga0181537_109678412	3300014201	Bog	MIYLIALLPATALTIAGYFVIYLSHRSEGTFQRFGKYLGFWAFTLAGLVI
Ga0182018_103950822	3300014489	Palsa	MIYFLALIPATALTVAGYFVLYLAHRSEGAFRTLGKYLGFWAFTLAGLVILGAILAAA
Ga0181522_106162371	3300014657	Bog	MIYLLALLPATVLTVAGYFALYFSHRSEGSFRAFGKYLGFWAFTLAGLVM
Ga0137418_100152518	3300015241	Vadose Zone Soil	MGVAMIYFLALLPATALTIAGYFVLYLAARSEGALRTFGRYLGFWAFTLAGLLILGSIFA
Ga0182033_103197252	3300016319	Soil	MVYFLALLPATGLTIAGYFVLYLSARSEGSLRTFGRYLGYWAFTLAGLVVLGAIFAAAHHGHRGYCPWHDDRD
Ga0182033_115809302	3300016319	Soil	VLYLVPLLPATLLTVAGYFVLYLSGRSEGSLRTFGRYLGYWAFTLAGLVILGAIIA
Ga0182037_119874102	3300016404	Soil	MIYFLSLLPATGLTVAGYFVLYLSNRSEGSMRTFGRYLGFWAFTLAALVILGAIFAAAHGGRRHMGWHGGFRGE
Ga0181511_14447521	3300016702	Peatland	MHLKVRNDLPLSLLPATALTIAGYFVLFLSNRSEGALRAFGKYLGFWAFTLAGLVI
Ga0187824_101759202	3300017927	Freshwater Sediment	MLYFLALIPATALTLAGYVVLVLSARTEGALRSFGRYLGFWAFTLAALVILGAILAAARGGH
Ga0187819_101155881	3300017943	Freshwater Sediment	MIYFLALIPATMLTIAGYFVHYLSNRSEGAFRTFGKYLGFWAFTLAALVILGAIFAAAHGGHHGMRF
Ga0187780_110330201	3300017973	Tropical Peatland	MIYLLALLPATMLTVAGYFVLVLSTRAEGPLRAFGRYLGFWAFTLAGLVILGAIFA
Ga0187771_116533171	3300018088	Tropical Peatland	MIYFIALVPATMLTVAGYFVLYLSNRSEGTFQKFGKYLGFWAFTLAGLVILGAIFAAARCGRYG
Ga0210404_104101081	3300021088	Soil	MIYFLALLPATALTIAGYFVLYLSGRSEGALRTFGKYLGFWAFTLAGLLVLGAVFAAAHGRHHCPVFG
Ga0210400_111774141	3300021170	Soil	MIYFLALLPATALTIAGYFVLFLSNRSEGSFRTFGKYLGFWAFTLAALIVLGAIFAAAHGHRHHCPMRGAPG
Ga0210405_100712161	3300021171	Soil	MIFLLALIPATALTVAGYVALFLSHRSEGALRTFGRYLGIWAFILAGLVALG
Ga0210408_100461503	3300021178	Soil	MPYLLALLPATGLTIAGYFVLYLSARSEGSLRTFGKYLGYWAFTLAGLVILAAIF
Ga0210408_114656392	3300021178	Soil	MIYLLVLLPATALSVGGYVALFLAGRSEGRMRTFGKYLGYWVFTLAALLVLAAIF
Ga0210396_101399471	3300021180	Soil	MIFLLALIPATALTVAGYVALFLSHRSDGALRTFGRYLGIWAFVLAALVALGG
Ga0210391_106339212	3300021433	Soil	MIYLLALLPATALTIAGYLALFLSARSAGGMQTFGKLLGFWAFTLAALVILGALFAAAHHRHHGMRGGM
Ga0210390_115044441	3300021474	Soil	VIYFLSLLPATALTIGGYFAWFLAERSQGGMKTFGRFLGFWAFALAALVILGALFAAAHGGHRGFMRM
Ga0210398_100333561	3300021477	Soil	MIYFLALLPATALTIAGYFVLYLASRSEGGLRTFGRYLAFWAFTLAGLVVLGAIFAAAHGHGRWRGMHEH
Ga0210410_107046121	3300021479	Soil	MIYLVALLPATALTIAGYFVLFLSNRSEGGFRTFGKYLGFWAFTLAGLIILAAIFAAAHGRHHCPMMERAN
Ga0210410_113636311	3300021479	Soil	MIYFLALIPATVLTIAGYVVLFLSARSEGTLRTFGKYLGFWAFTLAGLVVLGAIFAAAYGHHRCSIVGIHGM
Ga0126371_110698371	3300021560	Tropical Forest Soil	MIYFLALIPATGLTLAGYVVLVLSARTEGGLRTFGRYLGFWAFMLAALVILGAVFAAARGGHPGF
Ga0213853_112909121	3300021861	Watersheds	MIFFLALIPATMLTMAGYAVIFLANRSEGGLRNFGKYLGFWAFTLAGLLVLGSLLHAAHGGRWHGMMMH
Ga0224547_10127363	3300023255	Soil	MIYFIALIPATALTVAGYFVLFLSHRSEGAFRTFGKYLGFWAFTLAGLVILGAIFAAAHGGRHGGMM
Ga0207664_100972583	3300025929	Agricultural Soil	MLYFLALIPATALTLAGYVVLVLSARTEGALRSFGRYLGFWAFTLAALVILGAILAAARGGHHGFGPHGMHCPW
Ga0207689_107584021	3300025942	Miscanthus Rhizosphere	MIYFLALVPATILTIAGYGVLFLAQRSEGSLKSFGRYLGFWAFTLAGLVVLGAIFAAARGPRMHT
Ga0209890_102385801	3300026291	Soil	MIYFLALLPATALTIAGYFVLVLANRSDGVLRTFGKYLGFWAFTLAALVVLGAIFAAAHG
Ga0209158_12881191	3300026333	Soil	MIYFLALLPATALTIAGYFVLYLSARSEGALRTFGRYLGFWAFTLAGLVILGALFAAAHGPHHCPVFGMH
Ga0209159_11875671	3300026343	Soil	MIYFLALLPATALTIAGYFVLYLSARSEGALRTFGRYLGFWAFTLAGLVILG
Ga0209376_13764291	3300026540	Soil	MIYFLALLPATGLTIAGYFALYLSARSEGALRTFGRYLGFWAFTLAGLVILGSMFAAA
Ga0209648_101411751	3300026551	Grasslands Soil	MIYFLALLPATALTIGGYFVLFLSARSEGALRTFGKYLGFWAFTLAGLLMLGAIFAAAHG
Ga0179593_12429361	3300026555	Vadose Zone Soil	MIYFLALLPATVLTIAGYFVLYLSNRSEGTFRTFGKYLGFGAFTLAALVILGAIFAAGSRPPSLPHDR
Ga0207777_10897052	3300027330	Tropical Forest Soil	MIYFLALLPATGLTVAGYFVLYLSNRSEGSMRTFGRYLSFWAFTLAALVILGAIFAAAHGGRRHMGWHGGFR
Ga0209421_10607301	3300027432	Forest Soil	MIYFLALIPATGLTVAGYFVLFLANRSEGAFRSFGKYLGFWAFSLAGLVILGAIFAAA
Ga0209009_10567681	3300027667	Forest Soil	MIYFIALIPATALTIAGYFVLYLSNRSEGTFQKFGKYLGFWAFTLAALIVL
Ga0207862_11307642	3300027703	Tropical Forest Soil	MPYLLALLPATALTIAGYFVLYLSERSQGSLRTFGRYLGYWAFTLAGLVILGAIFAAATHAGHRHG
Ga0209328_102418181	3300027727	Forest Soil	MIYFLALLPATVLSIAGYFVLYLSNRSEGAFRTFGKYLGFWAFTLAALVILGVVYGG
Ga0209169_103628801	3300027879	Soil	MIYFLALIPATALSVAGYFALYLSQRSEGGFRAFGKYLGFWAFTLAGLVILGAIFAAAHG
Ga0209380_100217801	3300027889	Soil	MIYLLALIPATALTIAGYFALFLSTRMEGGLRTFGKYLGVWAFTLAALVVLGALFAAAHGGRHR
Ga0209380_106915411	3300027889	Soil	MIYFLALLPATALTIAGYLVLFLSNRSEGSFRTFGKYLGFWAFTLAALVVLGAIFAAAHGRRH
Ga0209068_102032001	3300027894	Watersheds	MIFLLALLPATMLTVAGYVVHYLSNRSEGTFRSFGKYLSFWVFTLAALVI
Ga0209068_108331771	3300027894	Watersheds	MIFFLALIPATMLTMAGYAVIFLANRSEGGLRNFGKYLGFWAFTLAGLLVLGSLLHAAHGGRWHGMMMHGYAGGW
Ga0209624_103078372	3300027895	Forest Soil	MIYFLALIPATALSVAGYFALYLSQRSEGGFRSFGKYLGFWAFTLAGLVILGAIFAAAHGERYRAMMRAHA
Ga0209624_103125942	3300027895	Forest Soil	MIYFAALIPATALAIAGYFVLFLSNRSEGAFRTVGRYLGFWAFTLAGLIVLGAIFAAAHGRHHGVFC
Ga0209526_101250313	3300028047	Forest Soil	MIYFLALIPATALTIAGYVVLFLSARSEGTLRTFGKYLGFWAFTLAGLVVLGAIFAAAYGHHRCPFVGIHGM
Ga0302221_105426232	3300028806	Palsa	MIYFLALLPATALTIAGYFVWYLSNRSEGSFRTFGRYLGFWAFTLAALVILGAIFAAAHGHRYGDMM
Ga0302177_100677161	3300030053	Palsa	MIYFLALLPATALTIAGYFVWYLSNRSEGSFRTFGRYLGFWAFTLAALVILGAIFAAA
Ga0302177_105077301	3300030053	Palsa	MGDSMIYFIALIPATALTIAGYFVLYLSHRSEGALRTLGRYLGFWAFTLAGLVILGAIFAAAHGGRHRGMIGGRG
Ga0302184_101908542	3300030490	Palsa	MIYFLALIPATGLTVMGYFVFYLASRSDGSFQRFGKYLGFWAFTLAGLVILGAIFAAANGHHQMHGRMHGPW
Ga0311370_106410962	3300030503	Palsa	MIYFIALIPATALTIAGYFVLYLSNRSEGTFQKFGRYLGFWAFTLAGLVVLGAIFAAAHGGHHG
Ga0302183_100065951	3300030509	Palsa	MIYFLALIPATGLTVMGYFVFYLASRSDGSFQRFGKYLGFWAFTLAGLVILGAIFAAANGHHQMHGRMHGPWH
Ga0311356_105888652	3300030617	Palsa	MGDSMIYFIALIPATALTIAGYFVLYLSHRSEGALRTLGRYLGFWAFTLAGLVILGAIFAAAHGGRHRGMI
Ga0310038_103182151	3300030707	Peatlands Soil	MIYFLALIPATMLTVAGYFLLFLSNRSEGAFRSFGKYLGFWAFTLAALVILGAIFAAAHG
Ga0302308_106225111	3300031027	Palsa	MIYFLALIPATALTVAGYFVLYLAHRSEGAFRTLGKYLGFWAFTLAGLIILGAIFAAA
Ga0302308_106426642	3300031027	Palsa	MIYFLALLPATALTIAGYFVWYLSNRSEGSFRTFGRYLGFWAFTLAALVILGAI
Ga0302325_114941091	3300031234	Palsa	MIYLLALIPATGLTVAGYFVLYLSQRSEGNLRAFGKYLGFWAFTLAALVILAAIFAAAH
Ga0170820_106653872	3300031446	Forest Soil	MIYLLVLFPATALTVGGYVALFLAGRSEGRMRSFGKYLGYWAFTLAALLVL
Ga0318516_100493452	3300031543	Soil	MLYLLALLPATAITIAGYFALYLSARSEGSMRTFGRYLGYWAFTLAGLVILGAIFAAAHHCHGH
Ga0318541_108454331	3300031545	Soil	MVYFLALLPATALTIAGYFVLYLSARSEGSLRTFGRYLGYWAFTLAGLVILGAIFAAAHGGHHGSCPWHH
Ga0318538_107784431	3300031546	Soil	MPYLLALLPATALTVAGYFVLYLSARSEGSLRTFGKYLGYWVFTLAGLVILGAILAAAHGGHHGHG
Ga0318573_102264682	3300031564	Soil	VIFLLVLLPATGLTIAGYFVLYLSSRTEGTLRTFGRYLGFWAFTLAGLLILAALFAAAHFGHHGM
Ga0318555_103274902	3300031640	Soil	MIYFLALLPATGLTVAGYFVLYLSNRSEGSMRTFGRYLGFWAFTLAALVILGAIFAAAHGGRRHMGWHG
Ga0318542_101883552	3300031668	Soil	VIFLLVLLPATGLTIAGYFVLYLSSRTEGTLRTFGRYLGFWAFTLAGLLILAALFAAAHF
Ga0318574_100444652	3300031680	Soil	VIFLLVLIPATVLTIAGYFVLYLSSRADGALRTFGRYLGFWAFTLAGLLILAALFAAA
Ga0318560_100084914	3300031682	Soil	VIFLLVLLPATGLTIAGYFVLYLSSRTEGTLRTFGRYLGFWAFTLAGLLILAALFAAAHFGHHGMFAAHGG
Ga0310686_1181373541	3300031708	Soil	MIFILALIPATALTVAGYCVLYVSQRSEGSFRSFGKYLGFWAFTLAGLVLLGAIFAAAHAGRYGPMMHAR
Ga0318496_107872361	3300031713	Soil	MIYILALLPATMLTIAGYVVLFLAARSEGGLKSFGKYLGFWAFTLAALVMLGAIFAAASHHGHRG
Ga0306917_108691642	3300031719	Soil	MPYLLALLPATALTVAGYFVLYLSARSEGSLRTFGKYLGYWAFTLAGLVILGAILAA
Ga0318501_105628931	3300031736	Soil	VIFLLVLLPATGLTIAGYFVLYLSSRTDGALRTFGRYLGFWAFTLAGLLILAALFAAAHFGHH
Ga0306918_100238781	3300031744	Soil	VIFLLVLLPATGLTIAGYFVLYLSSRTEGTLRTFGRYLGFWAFTLAGLLILAAL
Ga0318502_103081662	3300031747	Soil	MPYLLALLPATALTVAGYFVLYLSARSEGSLRTFGKYLGYWAFTLAGLVILGAILAAAHG
Ga0318502_108452452	3300031747	Soil	VIFLLVLLPATGLTIAGYFVLYLSSRTEGTLRTFGRYLGFWAFTLAGLLILAALFAAAHFGHHGMFAAHGGYC
Ga0318537_100960512	3300031763	Soil	VIFLLVLLPATGLTIAGYFVLYLSSRTEGTLRTFGRYLGFWAFTLAGLLILAALFAAAHFGHHGMFATH
Ga0318526_102786652	3300031769	Soil	VIFLLVLIPATVLTIAGYFVLYLSSRADGALRTFGRYLGFWAFTLAGLLILAALFAAAHFGHHGMFAEHG
Ga0318521_102441961	3300031770	Soil	MPYLLALLPATALTVAGYFVLYLSARSEGSLRTFGKYLGYWAFTLAGLVILGAILAAAHGGHHHHGDFCPWHDERG
Ga0318546_105515512	3300031771	Soil	MIYFLALLPATGLTVAGYFVLYLSNRSEGSMRTFGRYLGFWAFTLAALVILG
Ga0318498_102270702	3300031778	Soil	MIYFLALLPATGLTVAGYFVLYLSNRSEGSMRTFGRYLGFWAFTLAALVILGAIFAAAHGGRRHMGWHGGFR
Ga0318508_10161411	3300031780	Soil	VIFLLVLLPATGLTIAGYFVLYLSSRTEGTLRTFGRYLGFWAFTLAGLLILAALF
Ga0318576_101380901	3300031796	Soil	VIFLLVLLPATGLTIAGYFVLYLSSRTDGALRTFGRYLGFWAFTLAGLLILAALF
Ga0318550_105935051	3300031797	Soil	MVYFLALLPATALTIAGYFVLYLSARSEGSLRTFGRYLGYWAFTLAGLVILGAIFAAAHGGHHGSCPWHHDRDAHY
Ga0318523_104499162	3300031798	Soil	VLYLVALLPATLLTVAGYFVLYLSGRSEGSLRTFGRYLGYWAFTLAGLVILGAIIAAAHGGHHGLMAAHG
Ga0318497_100197412	3300031805	Soil	MLYLLALLPATAITIAGYFALYLSARSEGSMRTFGRYLGYWAFTLAGLVILGAIF
Ga0318497_101125292	3300031805	Soil	MPYLLALLPATALTVAGYFVLYLSARSEGSLRTFGKYLGYWAFTLAGLVIL
Ga0318497_103969092	3300031805	Soil	MIYFLALLPATGLTVAGYFVLYLSNRSEGSMRTFGRYLGFWAFTLAALVILGAIFAAAHGGRRHMGWHGGGP
Ga0318564_103151092	3300031831	Soil	MPYLLALLPATALTVAGYFVLYLSARSEGSLRTFGKYLGYWAFTLAGLVILGAILAAAHGGHHHHGDFCPWHDERGER
Ga0318499_100089371	3300031832	Soil	MLYLLALLPATAITIAGYFALYLSARSEGSMRTFGRYLGYWAFTLAGLVILGAIFAAAHHCHGHCPWHH
Ga0318517_102121312	3300031835	Soil	MPYLLALLPATALTVAGYFVLYLSARSEGSLRTFGKYLGYWAFTLAGLVILGAILAAAHGGHH
Ga0318517_102461701	3300031835	Soil	VIFLLVLIPATVLTIAGYFVLYLSSRADGALRTFGRYLGFWAFTLAGLLILAALFAAAHFGHHGMFAEHGGY
Ga0318527_103543012	3300031859	Soil	MIYFLALLPATGLTVAGYFVLYLSNRSEGSMRTFGRYLGFWAFTLAALVILGAIFA
Ga0318527_104719382	3300031859	Soil	MLYFLALLPATALTVAGYFVLYLSARSEGSLRTFGKYLGYWAFTLAGLVILGAILAAAHGRHHGHGMYCPWHDERGE
Ga0318495_104822061	3300031860	Soil	MIYFLALLPATGLTVAGYFVLYLSNRSEGSMRTFGRYLGFWAFTLAALVILGAIFAAAHGGRRHMGW
Ga0306925_102139021	3300031890	Soil	MLYLLALLPATALTIAGYFALYLSARSEGSMRTFGRYLGYWAFTLAGLVILGAIFAAA
Ga0318536_100323621	3300031893	Soil	VIFLLVLLPATGLTIAGYFVLYLSSRTDGALRTFGRYLGFWAFTLAGLLILAALFAAAHFGHHGMGHGGYC
Ga0318536_105661411	3300031893	Soil	MPYLLALLPATALTVAGYFVLYLSARSEGSLRTFGKYLGYWAFTLAGLVILGA
Ga0318520_108648162	3300031897	Soil	MIYFLALLPATGLTVAGYFVLYLSNRSEGSMRTFGRYLGFWAFTLAALVILGAIFAAAHGGRRHMGWHGGFRGEM
Ga0302322_1034158212	3300031902	Fen	MIFFVALVPATMLTVAGYVVLYISSRSEGGLKSFGRYLGFWAFTLAALVVLGSFLVAARGGGM
Ga0306921_101479722	3300031912	Soil	VIFLLVLIPATVLTIAGYFVLYLSSRADGALRTFGRYLGFWAFTLAGLLILAALFAAAHFGHHGMFAE
Ga0310913_101377372	3300031945	Soil	VIFLLVLIPATVLTIAGYFVLYLSSRADGALRTFGRYLGFWAFTLAGLLILAAL
Ga0318530_104546362	3300031959	Soil	MLYLLALLPATAITIAGYFALYLSARSEGSMRTFGRYLGYWAFTLAGLVILGA
Ga0318563_103703522	3300032009	Soil	MLYFLALLPATALTVAGYFVLYLSARSEGSLRTFGKYLGYWAFTLAGLVILG
Ga0318569_100740171	3300032010	Soil	MLYLLALLPATAITIAGYFALYLSARSEGSMRTFGRYLGYWAFTLAGLVILGAIFAAAHHCHGHCPWHHD
Ga0318545_103072411	3300032042	Soil	VIFLLVLLPATGLTIAGYFVLYLSSRTDGALRTFGRYLGFWAFTLAGLLILAALFAAAHFGHHGMG
Ga0318545_103769032	3300032042	Soil	MLYFLALLPATALTVAGYFVLYLSARSEGSLRTFGKYLGYWAFTLAGLVILGAILAAAHGRHHGHGMYCP
Ga0318556_102475802	3300032043	Soil	MIYFLALLPATGLTVAGYFVLYLSNRSEGSMRTFGRYLGFWAFTLAALVIL
Ga0318533_105152252	3300032059	Soil	MPYLLALLPATALTVAGYFVLYLSARSEGSLRTFGKYLGYWAFTLAGLVILGAILAAAHGGHHHH
Ga0318524_107975262	3300032067	Soil	VIFLLVLLPATGLTIAGYFVLYLSSRTEGTLRTFGRYLGFWAFTLAGLLILAA
Ga0318553_104189322	3300032068	Soil	MPYLLALFPATALTIAGYFVLYLSARSEGSLRTFGKYLGYWAFTLAGLVIL
Ga0318525_104854212	3300032089	Soil	VIFLLVLLPATGLTIAGYFVLYLSSRTEGTLRTFGRYLGFWAFTLAGLLILAALFAAAHFGHHGMFAAHGRY
Ga0307472_1000400451	3300032205	Hardwood Forest Soil	MIYFLALLPATALTIGGYLVLVLSARTEGALRTFGKYLGFWAFTLAGLIILGAIFAAAHGAR
Ga0335080_112533301	3300032828	Soil	MIYFLALIPATALTIAGYFVLYLSNRSEGAFRTFGKYLGFWAFTLAGLVILGAIFAAAHHGG
Ga0335081_123718662	3300032892	Soil	VIYLLALLPATGLTVAGYFVLVLSTRAEGALRTFGKYLGFWAFTLAGLVILGAIFAAAHGGHRGA
Ga0310914_106917522	3300033289	Soil	VIFLLVLLPATGLTIAGYFVLYLSSRTDGALRTFGRYLGFWAFTLAGLLILAALFAAAHF
Ga0310914_109133692	3300033289	Soil	MLYLLALLPATAITIAGYFALYLSARSEGSMRTFGRYLGYWAFTLAGLVI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F044707

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences