NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F044696

Metagenome / Metatranscriptome Family F044696

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F044696
Family Type Metagenome / Metatranscriptome
Number of Sequences 154
Average Sequence Length 60 residues
Representative Sequence GAADLVRDNGFNAGIDYKPVGYLDLEFDYSRSVPLQLNSYSFGIGVDLSWLLRPRVH
Number of Associated Samples 111
Number of Associated Scaffolds 154

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 3.25 %
% of genes near scaffold ends (potentially truncated) 92.86 %
% of genes from short scaffolds (< 2000 bps) 89.61 %
Associated GOLD sequencing projects 101
AlphaFold2 3D model prediction Yes
3D model pTM-score0.17

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (91.558 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(46.104 % of family members)
Environment Ontology (ENVO) Unclassified
(44.156 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(46.753 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84
1JGI25381J37097_10170361
2JGI25390J43892_100148341
3JGI25617J43924_100852521
4Ga0066674_102050401
5Ga0066677_102384262
6Ga0066680_102964092
7Ga0066684_105746112
8Ga0066388_1055622312
9Ga0070698_1001905564
10Ga0066699_109171001
11Ga0066691_104527191
12Ga0075018_108534212
13Ga0079221_103462892
14Ga0079221_111050521
15Ga0079220_103059261
16Ga0099791_100055164
17Ga0099794_100551131
18Ga0066710_1025839072
19Ga0099829_110088152
20Ga0099829_114497261
21Ga0099829_114657331
22Ga0099829_116862543
23Ga0099830_101672721
24Ga0099830_102274684
25Ga0099830_102295323
26Ga0099830_112148281
27Ga0099828_114820332
28Ga0099827_105171312
29Ga0099827_116532821
30Ga0099792_101981341
31Ga0134067_100730952
32Ga0134086_100015686
33Ga0134111_105069022
34Ga0126370_104110082
35Ga0126378_106780181
36Ga0126379_110363631
37Ga0126381_1015408532
38Ga0126383_103569831
39Ga0126383_120281851
40Ga0137392_106808613
41Ga0137393_104904531
42Ga0137393_111629861
43Ga0137393_117183833
44Ga0137389_104826181
45Ga0137389_114355452
46Ga0137388_119700802
47Ga0137364_100119495
48Ga0137363_101202741
49Ga0137399_115194862
50Ga0137380_116754261
51Ga0137381_117263911
52Ga0137376_113356792
53Ga0137379_100418194
54Ga0137379_109382162
55Ga0137378_104953712
56Ga0137378_114737242
57Ga0137377_101014743
58Ga0137377_115345711
59Ga0137377_115903442
60Ga0137386_106357201
61Ga0137386_110144102
62Ga0137384_101214671
63Ga0137384_112521171
64Ga0137385_107267311
65Ga0137385_109081182
66Ga0137361_108986281
67Ga0137361_112669222
68Ga0137390_106611481
69Ga0134035_11299122
70Ga0137398_107377892
71Ga0137395_112504172
72Ga0137396_104356771
73Ga0137396_111969551
74Ga0137396_112147802
75Ga0137394_100777411
76Ga0137394_101811043
77Ga0137413_106815112
78Ga0137413_110523782
79Ga0137416_103281611
80Ga0137407_120576621
81Ga0137410_111878671
82Ga0126375_115642512
83Ga0134075_103177762
84Ga0134075_104660482
85Ga0137405_13626211
86Ga0137405_13661952
87Ga0137420_10714672
88Ga0137420_12697332
89Ga0137420_13020581
90Ga0137420_13852512
91Ga0182036_110407651
92Ga0182033_121113571
93Ga0182032_106321412
94Ga0182034_117908791
95Ga0182037_101679263
96Ga0066662_122404841
97Ga0066669_100538603
98Ga0137408_14247303
99Ga0179594_102872081
100Ga0210407_100449992
101Ga0210407_105364551
102Ga0210407_110484571
103Ga0210403_108351301
104Ga0210403_111729381
105Ga0210401_110559782
106Ga0179596_101182551
107Ga0210406_107423942
108Ga0210408_104404761
109Ga0210408_108686672
110Ga0210393_103982113
111Ga0210393_112661531
112Ga0210397_103873402
113Ga0210410_109701091
114Ga0126371_117087353
115Ga0126371_118066171
116Ga0209350_10775551
117Ga0209234_10657741
118Ga0209239_13453381
119Ga0209647_12529831
120Ga0209131_12529691
121Ga0209801_10560893
122Ga0209266_12072051
123Ga0209802_12939611
124Ga0209473_12004412
125Ga0209806_10192436
126Ga0209577_103199242
127Ga0209220_10101671
128Ga0209220_10373913
129Ga0208988_10771692
130Ga0209076_10011296
131Ga0209515_100296953
132Ga0209580_100175921
133Ga0209701_100374061
134Ga0209701_100864951
135Ga0209701_107020861
136Ga0209465_101316742
137Ga0209283_108486481
138Ga0209590_101033722
139Ga0209590_102684962
140Ga0073994_119888521
141Ga0306917_115070381
142Ga0307475_103916322
143Ga0307475_105586331
144Ga0318557_101652471
145Ga0318557_104829203
146Ga0318567_108433161
147Ga0306923_109482482
148Ga0306921_115228561
149Ga0306926_126299931
150Ga0307479_112878331
151Ga0307479_118729271
152Ga0306920_1007140472
153Ga0306920_1033151111
154Ga0310914_101933351
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 0.00%    Coil/Unstructured: 100.00%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

510152025303540455055GAADLVRDNGFNAGIDYKPVGYLDLEFDYSRSVPLQLNSYSFGIGVDLSWLLRPRVHSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.17
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
91.6%8.4%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Groundwater
Watersheds
Vadose Zone Soil
Tropical Forest Soil
Grasslands Soil
Surface Soil
Agricultural Soil
Soil
Grasslands Soil
Soil
Soil
Hardwood Forest Soil
Soil
Tropical Forest Soil
Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
46.1%5.8%3.9%7.1%7.1%11.7%7.1%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI25381J37097_101703613300002557Grasslands SoilVRDNGFNAAIDYKPVGYLDLQFDSSRSVPLQLNSYAFGIGVDLSWL
JGI25390J43892_1001483413300002911Grasslands SoilRHGYTSSSVTSGGAALVRDNGYNAGIDYKPVGYLDFEFDFSRSVPLQLNSYSFGIGVDLTRLVRPRAH*
JGI25617J43924_1008525213300002914Grasslands SoilTTASVSTGGADLTRDNGFNAGVDYKPVGYLDLEFGISRSVPLHLNSYSFGIGVDLSSLLRPHVH*
Ga0066674_1020504013300005166SoilRISHNRHGFASSSVTKGGSDLVRDNGYEAGIDFRPVHYLDFEFAYSRSVPLHLNNYSFGMGVNLSSLVRQRAH*
Ga0066677_1023842623300005171SoilSVTSGGAALVRDNGYNAGIDYKPVGYLDFEFDFSRSVPLQLNSYSFGIGVDLTRLVRPRAH*
Ga0066680_1029640923300005174SoilADLVRDNGYNAGIDYKPVGYLDFEFDYSRSVPLQLNSYSFGIGVDLSWLLRPRVH*
Ga0066684_1057461123300005179SoilEAGIDFKPVYYLDFEFDYGRSVPLHLNNYSFGIGINLSSLVRPHAH*
Ga0066388_10556223123300005332Tropical Forest SoilGYTLAAIQAGSADLVRDNGFNAGIDFKPVSRLDLEFDYSRSVPLQLNSFSFGIGVDLSWLLRPDTHRR*
Ga0070698_10019055643300005471Corn, Switchgrass And Miscanthus RhizosphereMQNSGRNECQRRLGVSTGAADLVRDNGFNAGVDYKPVGYLDLEFDFSCSVPLQLNSYSLGMGVDLSWLLRPHVH*
Ga0066699_1091710013300005561SoilHDNGYGAGIDFKPAYYLDFEFDYRRSAPLHLNSYSFGIGINRSSLVRPRAH*
Ga0066691_1045271913300005586SoilRNGFTSSSVTTGSAALVRDNGYEAGIDFKPVYYLDFEFDYSRSVPLRLNNYSFGIGLDLSSLVRSRAH*
Ga0075018_1085342123300006172WatershedsDLVRDNGYNAGIDYKPVGYIDLEFDFSRSVPLQLNSYSFGIGVDLSWLLRPHAH*
Ga0079221_1034628923300006804Agricultural SoilDLVRDNGYEAGFDFKPAYYLDFEFDYSRSVPLRLNNYSFGIGVNLSSLVRPHAH*
Ga0079221_1110505213300006804Agricultural SoilGFDFKPAYYLDFEFDYSRSVPLHLNNYSFGIGVNLSSLVRPRAH*
Ga0079220_1030592613300006806Agricultural SoilTNRKGFTSSSVTTGGSGLTRDNGYEAGIDFKPVYYLDFEFDYSRSVPLQLNNYSFGIGINLSSLVRPKAH*
Ga0099791_1000551643300007255Vadose Zone SoilGGSTNRKGYTSSSVTSGSADLTRDNGYNSGIDYNPVGYLDLEFDFSRSIPLQLNSYSFGIGVDLSWLLRPHAH*
Ga0099794_1005511313300007265Vadose Zone SoilSVSTGAADLVRDNGFDAGVDYKPVDYLDLEFDFSRSVPLRLNSYSFGIGVDLSWLLRPRAH*
Ga0066710_10258390723300009012Grasslands SoilSASVSTGAADLVRDNGFNAAIDYKPVGYLDLQFDSSRSVPLQLNSYAFGIGVDLSWLLRPHAH
Ga0099829_1100881523300009038Vadose Zone SoilGSAGSTNRKGFTSSSVTSGPADLTRDNGYNAGIDYKPVGYLDFEFDYSRSVPLQLNSYSFGIGVDLSWLLRPRVH*
Ga0099829_1144972613300009038Vadose Zone SoilAGAADLVRDNGFNGGIDYKPVGYVDLEFDFSRSVPLQLNSYSFGIGVDLSWLLRPHAH*
Ga0099829_1146573313300009038Vadose Zone SoilNAGIDYKPVDYLDFEFDFSRSVPLQLNSYSFGIGVDLSWLLRPHVR*
Ga0099829_1168625433300009038Vadose Zone SoilRKSFTTSSVSTGGADLVRDNGFNGGIDYKPVGYVDLEFDFSRSVPLQLNSYSFGIGVDLSWLLRPHAH*
Ga0099830_1016727213300009088Vadose Zone SoilSTNRNGFTSSSVTSGSADLTRDNGYNAGIDYKPVDYLDLEFDFSRSVPLQLNSYSFGIGVDLSWLLRPRAH*
Ga0099830_1022746843300009088Vadose Zone SoilLVRDNGYNAGIDYKPVGYLDLEFDFSRSIPLHLNSYSFGIGVDLSWLIRPHAH*
Ga0099830_1022953233300009088Vadose Zone SoilRDNGFNAGVDYKPAGYLDFEFDFSRSVPLQLNSYSFGIGVDLSRLLRPRVH*
Ga0099830_1121482813300009088Vadose Zone SoilLVRDNGYNAGIDYKPVGYLDLEFDFSRSIPLHLNSYSFGIGVDLSWLIRPHVH*
Ga0099828_1148203323300009089Vadose Zone SoilVRDNGFNGGIDYKPVGYVDLEFDFSRSVPLQLNSYSFGIGVDLSWLLRPHAH*
Ga0099827_1051713123300009090Vadose Zone SoilISASVSTGAADLVRDNGYNAGIDYKPVGYLDLEFDFSRSVPLQLNSYSFGIGVDLSRLLRPRAR*
Ga0099827_1165328213300009090Vadose Zone SoilPTKNRKRFTTASVSAGAADLVRDNGYNAGIDYKPVGYLDLEFDFSRSVPLQLNSYSFGIGVDLSWLLRPRPH*
Ga0099792_1019813413300009143Vadose Zone SoilVSTGAADLVRDNGFNAGVDFKPVGYLDLEFDFSRSVPLRLNSYSFGIGVDLSWLLRPRAR
Ga0134067_1007309523300010321Grasslands SoilFASSSVTKGGSDLVRDNGYEAGIDFRPVHYLDFEFAYSRSVPLHLNNYSFGMGVNLSSLVRQRAH*
Ga0134086_1000156863300010323Grasslands SoilVRDNGYNAGIDYKPVGYLDFEFDFSRSVPLQLNSYSFGIGVDLTRLVRPRAH*
Ga0134111_1050690223300010329Grasslands SoilSASCSATRRISHNRHGFASSSVTKGGSDLVRDNGYEAGIDFRPVHYLDFEFAYSRSVPLHLNNYSFGMGVNLSSLVRQRAH*
Ga0126370_1041100823300010358Tropical Forest SoilGSGTSTNRGGFNSSSVTTGGASLTRDNGYEAGFDFKPAYYLDLEFDYSRSVLLHLNNYSFGIGVNLSSLVRPRAH*
Ga0126378_1067801813300010361Tropical Forest SoilYKSASVTAGAADLTRDNGFNAGIDVKPVKYLDLEADFGRSVPLQLNSFSFGISFDLHMLYTQARH*
Ga0126379_1103636313300010366Tropical Forest SoilGGQSSNRKGFASSSVTAGGADLVRDNGYEVGIDYKPISYLDFEFDYSRSVPLSLNNYSFGIGINLSSLVRPRAH*
Ga0126381_10154085323300010376Tropical Forest SoilYEAGIDFKPVYYLDFEFDYSRSVPLQLNNYSFGIGINLSSLVRPHAH*
Ga0126383_1035698313300010398Tropical Forest SoilASVTAGAADLTRDNGFNAGIDVKPVKYLDLEADFGRSVPLQLNSFSFGISFDLHMLYTQARH*
Ga0126383_1202818513300010398Tropical Forest SoilGGAALVRDNGYEAGIDFKPVYYLDFEFDYSRSVPLQLNNYSFGIGINLSSLVRPRRH*
Ga0137392_1068086133300011269Vadose Zone SoilSSVSTGGADLVRDNGYNAGIDYKPVGYLDLEFDFSRSIPLHLNSYSFGIGVDLSWLIRPHVH*
Ga0137393_1049045313300011271Vadose Zone SoilGFNGGIDYKPVGYLDLEFDFSRSVPLQLNSYSFGIGVDLSWLLRPHVH*
Ga0137393_1116298613300011271Vadose Zone SoilKGFTTSNVTTGGAALTRDNGYEAGIDFKPVYYLDFEFDYSRSVPLQLNNYSFGIGINLSSLVRPRAH*
Ga0137393_1171838333300011271Vadose Zone SoilSSGGADLVRDNGFDAGIDYKPLGYLDLEFDFSRSIPLHLNSYSFGIGVDLSWLIRPHVH*
Ga0137389_1048261813300012096Vadose Zone SoilAGAKTTNRKSFTTSSVSTGGADLVRDNGFNAGVDYKPVGYLDFEFDFSRSVPLQLNSYSFGIGVDLSRLLRPRVR*
Ga0137389_1143554523300012096Vadose Zone SoilFNAGVDYKPAGYLDFEFDFSRSVPLQLNSYSFGIGVDLSRLLRPRVH*
Ga0137388_1197008023300012189Vadose Zone SoilNAGIDYKPAGYLDLEFDFSRSIPLHLNSYSFGIGVDLSWLLRTRVH*
Ga0137364_1001194953300012198Vadose Zone SoilVRDNGFNAAIDYKPVGYLDLQFDSSRSVPLQLNSYAFGIGVDLSWLLRPHAH*
Ga0137363_1012027413300012202Vadose Zone SoilVRDNGFNAGIDYKPVGYLDLEFDYSRSVPLQLNSYSFGIGVDLSWLLRPHAR*
Ga0137399_1151948623300012203Vadose Zone SoilADLVRDNGFNGGIDYRPAGYLDLEFDFSRSVPLQLNSYSFGIGVDLSRLLLPRAH*
Ga0137380_1167542613300012206Vadose Zone SoilTGTTTNRKGFTSSSVTSGGADLVRDDGYNAGIDYKPVGYLDLEFDFSRSVPLHLNSYSLGIGVDLSWLLRPHVR*
Ga0137381_1172639113300012207Vadose Zone SoilDNGYNAGIDYKPVGYLDLEFDVSRSVPLQLNSYSFGIGVDLSWLLRPHAH*
Ga0137376_1133567923300012208Vadose Zone SoilGKTTNRQNFTSASVSTGAADLVRDNGFNAGIDYKPVGYLDLEFDFSRSVPLQLNSYSCGIGVDLSWLLRPHAH*
Ga0137379_1004181943300012209Vadose Zone SoilKPVYYLDFEFDYSRSVPLHLNNYSFGIGVNLSSLVRPRAH*
Ga0137379_1093821623300012209Vadose Zone SoilTSSNRKGFTSSSVTSGGADLVRDNGYNAGIDYKPVGYLDLEFDFSRSVPLHLNSYSLGIGVDLSWLLRPHVR*
Ga0137378_1049537123300012210Vadose Zone SoilDNGYEAGFDFKPVYYLDFEFDYSRSVPLHLNNYSFGIGVNLSSLVRPRAH*
Ga0137378_1147372423300012210Vadose Zone SoilGSGTSSNRKGFTSSSVTSGGADLVRDNGYNAGIDYKPVGYLDLEFDFSRSVPLHLNSYSLGIGVDLSWLLRPHVR*
Ga0137377_1010147433300012211Vadose Zone SoilFTTSSVSTGGADLVRDNGYNAGIDYKPVGYLDLEFDFSRSVPLQLNSYSFGIGVDLSWLLRPRPH*
Ga0137377_1153457113300012211Vadose Zone SoilAGFDFKPVYYLDFEFDYSRSVPLHLNNYSFGIGVNLSSLVRPRAH*
Ga0137377_1159034423300012211Vadose Zone SoilGNGTSSNRKGFTSSSVTSGGADLVRDNGYNAGIDYKPVGYLDLEFDFSRSVPLHLNSYSLGIGVDLSWLLRPRVR*
Ga0137386_1063572013300012351Vadose Zone SoilDLVRDNGYEAGIDFRPVHYLDFEFNYSRSVPLHLNNYSFGMGINLSSLVRPRAH*
Ga0137386_1101441023300012351Vadose Zone SoilSGGATKNRKTFTTSSVSTGGADLVRDNGYNAGIDYKPVGYLDLEFDFSRSIPLQLNSYSFGIGVDLSWLLRPRPH*
Ga0137384_1012146713300012357Vadose Zone SoilKTFTTSSVSTGGADLVRDNGYNAGIDYKPVGYLDLEFDFSRSIPLQLNSYSFGIGVDLSWLLRPRPH*
Ga0137384_1125211713300012357Vadose Zone SoilGGSGTSSNRTGFTSSSVTSGGAALVRDDGYNAGIDYKPVGYLDLEFSFSRSVPLHLNSYSLGIGVDLSWLLRPRVR*
Ga0137385_1072673113300012359Vadose Zone SoilTSSSVTSGGAALVRDDGYNAGIDYKPVGYLDLEFDFSRSVPLHLNSYSLGIGVDLSWLLRPHVR*
Ga0137385_1090811823300012359Vadose Zone SoilDNGYNAGIDYKPVRYLDLEFDYSRSVPLQLNSYSFAVGVDLSWLLRPHVR*
Ga0137361_1089862813300012362Vadose Zone SoilRDDGYNAGIDYKPVGYLDLEFDFSRSVPLHLNSYSLGIGVDLSWLLRPRVR*
Ga0137361_1126692223300012362Vadose Zone SoilGRSSNRHGFTSSSVTTGGADLVRDNGYNAGIDYKPVGYLDFEFDYSRSVPLQLNSYSFGVGMDLSWLLRPRAH*
Ga0137390_1066114813300012363Vadose Zone SoilKGFTSSSITSGGADLVRDNGYNAGIDYKPVGYLDFEFDFSRSVPLRLNSYSFGIGVDLSWLLRPRVH*
Ga0134035_112991223300012391Grasslands SoilASSSVTKGGSDLVRDNGYEAGIDFRPVHYLDFEFAYSRSVPLHLNNYSFGMGVNLSSLVRQRAH*
Ga0137398_1073778923300012683Vadose Zone SoilASVSAGAADLVRDNGFNGGVDYRPAGYLDLEFDFSRSVPLQLNSYSFGIGVDLSRLLRPRAR*
Ga0137395_1125041723300012917Vadose Zone SoilGPTKNRKGFTSSSVSTGAADLVRDNGYNASIDYKPAGYIDLEFDYSRSVPLRLNSYSFGIGVDLSWLMRPRAH*
Ga0137396_1043567713300012918Vadose Zone SoilTKNRKSFTTASVSTGAADLVRDNGFNASIDYKPVGYLDLEFDFSRSIPLQLNSYSFGIGVDLSWLLRPHVH*
Ga0137396_1119695513300012918Vadose Zone SoilMESLPALLRTNASAGIDYKPVGYLDLEFDFSRSIPLQLNSYSFGIGVDLSWLLRPHAR*
Ga0137396_1121478023300012918Vadose Zone SoilNAGVDYKPAGYLDFEFDFSRSVPLQLNSYSFGIGVDLSRLLRPRVR*
Ga0137394_1007774113300012922Vadose Zone SoilLVRDNGFNGGVDFKPVGYLDLEFDFSRSVPLRLNSYSFGIGVDLSWLLRPRAH*
Ga0137394_1018110433300012922Vadose Zone SoilRKSFTSSSVSTGGADLVRDNGFNAGVDFKPVGYLDLEFDFSRSVPLRLNSYSFGIGVDLSWLLRPRAH*
Ga0137413_1068151123300012924Vadose Zone SoilGNGSSSNRHGFTSSSVTTGGADLVRDNGYNAGIDYKPVGYLDFEFDFSRSIPLQLNSYSFGIGVDLSWLIRPRAH*
Ga0137413_1105237823300012924Vadose Zone SoilAADLVRDNGYDASIDYKPAGYIDLEFDYSRSVPLQLNSYSFGIGVDLSWLMRPRAH*
Ga0137416_1032816113300012927Vadose Zone SoilTSSVSTGAADLVRDNGFNAGVDYKPAGYLDFEFDFSRSVPLQLNSYSFGIGVDLSRLLRPRVH*
Ga0137407_1205766213300012930Vadose Zone SoilGSGGNTNRKGYTSSSVTSGSADLTRDNGYNAGIDYKPVGYIDFEFDFSRSIPLQLNSYSFGIGVDLSWLLRPHAH*
Ga0137410_1118786713300012944Vadose Zone SoilTSDRKSFTSSSVSTGAADLVRDNGFNAGVDFKPVGYLDLEFDFSRSVPLRLNSYSFGIGVDLSWLLRPRAR*
Ga0126375_1156425123300012948Tropical Forest SoilDLVRDNGYTAGINFRPAYYLDFAFAYSRSIPLRLNNYSFGVGLDLSSLLRPHAR*
Ga0134075_1031777623300014154Grasslands SoilTSSNVTTGGADLTRDNGYNAGIDYKPVGYLDLEFDFSRSVPLQLNSYSFGIGVDLSWLLRPHAH*
Ga0134075_1046604823300014154Grasslands SoilTKGGSDLVRDNGYEAGIDFRPVHYLDFEFAYSRSVPLHLNNYSFGMGVNLSSLVRQRAH*
Ga0137405_136262113300015053Vadose Zone SoilVRDNGFNAGVDFKPVDYLDLEFDFSRSVPLRLNSYSFGIGVDLSWLLRPRAR*
Ga0137405_136619523300015053Vadose Zone SoilVRDNGLNAGIDYKPVGYIDLEFDFSRSVPLQLNSYSFGVGVDLSWILHAGAH*
Ga0137420_107146723300015054Vadose Zone SoilGATKNRKSFTTASVSAGAADLVRDNGFNGGIDYRPAGYLDLEFDFSRSVPLQLNSYSFGIGVDLSKLLRPRTH*
Ga0137420_126973323300015054Vadose Zone SoilGAADLVRDNGFNGGVDYRPAGYLDLEFDFSRSVPLQLNSYSFGIGVDLSKLLRPRTH*
Ga0137420_130205813300015054Vadose Zone SoilLVRDNGFNGGVDYRPAGYLDLEFDFSRSVPLQLNSYSFGIGVDLSKLLRPRTH*
Ga0137420_138525123300015054Vadose Zone SoilTNRKGYTSSSVTSGSADLARDNGYNAGIDYKPVGYIDLEFDFSRSIPLQLNSYSFGIGVDLSWLLRPHAH*
Ga0182036_1104076513300016270SoilNGYEAGIDFKPVSYLDFEFDYSRSVPLSLNNYSFGIGINLSSLVRPRAH
Ga0182033_1211135713300016319SoilGGQSSNRKGFASSSVTAGGADLVRDNGYEVGIDFKPISYLDFEFDYSRSVPLSLNNYSFGIGINLSSLVRPRAH
Ga0182032_1063214123300016357SoilGFAVKPVYHPDVEFGYSRSVLLHLNNYSFGIGVNLSSLVRPHAH
Ga0182034_1179087913300016371SoilSAGIDYKPIGYLDLEFDYSRSVPLHLNIYSFGIGVDLSWALHPHIYR
Ga0182037_1016792633300016404SoilDLVRDNGYEAGIDFKPVSYLDFEFDYSRSVPLSLNNYSFGIGINLSSLVRPRAH
Ga0066662_1224048413300018468Grasslands SoilDNGYNASIDYKPVGYLDLEFDFSRSVPLRLNSYSFGIGMDLSWLIRPRAH
Ga0066669_1005386033300018482Grasslands SoilVRDNGFNAAIDYKPVGYLDLQFDSSRSVPLQLNSYAFGIGVDLSWLLRPHAH
Ga0137408_142473033300019789Vadose Zone SoilSSVSTGGADLVRDNGFNGGVDYKPVGYLDLEFDFSRSVPLRLNSYSFGIGMDLSWLLRPRAH
Ga0179594_1028720813300020170Vadose Zone SoilTSDRKSFTSSSVSTGGADLVRDNGFNAGVDFKPVGYLDLEFDFSRSVPLRLNSYSFGIGVDLSWLLRPRAH
Ga0210407_1004499923300020579SoilVRDNGYNAGIDYKPVAYLDLEFDYSRSVPLQLNSYSFGIGVDLSRLLRPRAR
Ga0210407_1053645513300020579SoilISTGGADLVRDNGFNGGIDYKPVGYLDLEFDFSRSVPLQLNSYSFGIGVDLSWLLRPHVR
Ga0210407_1104845713300020579SoilSVSTGAADLVRDNGFDAGIDYKPVGYLDLEFDFSRSVPLQLNSYSLGIGVDLSWLLRPYV
Ga0210403_1083513013300020580SoilNAGIDYKPVGYLDFEFDYSRSVPLQLDSYSFGIGVDLSWLLRPRSIDRH
Ga0210403_1117293813300020580SoilAGIDYKPVGYLDLEFDYSRSVPLQLNSYSFGIGVDLSWLLRPRAH
Ga0210401_1105597823300020583SoilFTSSSVSTGGADLVRDNGFNGGIDYKPVGYLDLEFDFSRSVPLQLNSYSFGIGVDLSWLLRPHVR
Ga0179596_1011825513300021086Vadose Zone SoilASISAGAADLVRDNGFNGGIDYKPVGYVDLEFDFSRSVPLQLNSYSFGIGVDLSWLLRPHAH
Ga0210406_1074239423300021168SoilNFTTASVSTGAADLVRDNGYNAGIDYKPVGYLDLEFDYSRSVPLQLNSYSFGIGVDLSWLLRPHVH
Ga0210408_1044047613300021178SoilRDNGFNAGIDYKPVGYIDLEFDFSRSVPLQLNSYSFGIGMDLSWALRPRAH
Ga0210408_1086866723300021178SoilSVSTGAADLVRDNGFNGGVDYKPVSYLDLEFDFSRSVPLQLNSYSFGIGIDLSWLLRPHV
Ga0210393_1039821133300021401SoilRDNGYNAGIDYKPVGYLDLEFDYSRSVPLQLNSYSFGIGVDLSWFLRPHVH
Ga0210393_1126615313300021401SoilNGYSAGIDYKPVGYLDLEFDYSRSVPLQLNNYSFGIGVDLSWLLRPHVR
Ga0210397_1038734023300021403SoilGPTKNRRSFTTASVSSGSADLVRDNGYNAGIDYKPVGYLDLEFDFSRSVPLQLNSYSFGIGVDLSWLLRPRVR
Ga0210410_1097010913300021479SoilRKSFTSSSVSTGGADLVRDNGFNGGIDYKPVGYLDLEFDFSRSVPLQLNSYSFGIGVDLSWLLRPHVR
Ga0126371_1170873533300021560Tropical Forest SoilGWNAGIDYKPSPRVDLEFDLSRSVPLHLNSYSFGIGVDLSQVLHPNIYK
Ga0126371_1180661713300021560Tropical Forest SoilTRDNGYEAGFDFKPAYYLDLEFDYSRSVPLHLNNYSFGIGVNLSSLVRPRAH
Ga0209350_107755513300026277Grasslands SoilRHGYTSSSVTSGGAALVRDNGYNAGIDYKPVGYLDFEFDFSRSVPLQLNSYSFGIGVDLTRLVRPRAH
Ga0209234_106577413300026295Grasslands SoilRSSNRHGYTSSSVTSGGAALVRDNGYNAGIDYKPVGYLDFEFDFSRSVPLQLNSYSFGIGVDLTRLVRPRAH
Ga0209239_134533813300026310Grasslands SoilVSAGAADLVRDNGYNAGIDYKPVGYLDLEFDYSRSVPLQLNSYSFAVGADLSWLLRPHVR
Ga0209647_125298313300026319Grasslands SoilTGAADLVRDNGLNAGIDYKPVGYIDLEFDFSRSVPLQLNSYSFGVGVDLSWILHAGAH
Ga0209131_125296913300026320Grasslands SoilGNTNRKGYTSSSVTSGSADLTRDNGYNAGIDYKPVGYIDFEFDFSRSIPLQLNSYSFGIGVDLSWLLQPHAH
Ga0209801_105608933300026326SoilNGRSSYRHGYTSSSVTSGGAALVRDNGYNAGIDYKPVGYLDFEFDFSRSVPLQLNSYSFGIGVDLTRLVRPRAH
Ga0209266_120720513300026327SoilNGYNAGIDYKPVGYLDLEFDFSRSVPLHLNSYSLGIGVDLSWLLRPHVR
Ga0209802_129396113300026328SoilVSSGAADLVRDNGYNAGIDYKPVGYLDFEFDYSRSVPLQLNSYSFGIGVDLSWLLRPRVH
Ga0209473_120044123300026330SoilEAGIDFKPVYYLDFEFDYGRSVPLHLNNYSFGIGINLSSLVRPHAH
Ga0209806_101924363300026529SoilGGAALVRDNGYNAGIDYKPVGYLDFEFDFSRSVPLQLNSYSFGIGVDLTRLVRPRAH
Ga0209577_1031992423300026552SoilRHGFASSSVTKGGSDLVRDNGYEAGIDFRPVHYLDFEFAYSRSVPLHLNNYSFGMGVNLSSLVRQRAH
Ga0209220_101016713300027587Forest SoilGFNAGIDYKPLGYLDLEFDFSRSVPLQLNSYSFGIGVDLSWLLRPHVR
Ga0209220_103739133300027587Forest SoilTTASISAGAADLVRDNGFNAGIDYKPLGYLDLEFDFSRSVPLQLNSYSFGLGVDLSWLMRPRAH
Ga0208988_107716923300027633Forest SoilNGFNGGVDYRPAGYLDLEFDFSRSVPLQLNSYSFGIGVDLSRLLRPRTH
Ga0209076_100112963300027643Vadose Zone SoilGFNGGIDYRPAGYLDLEFDFSRSVPLQLNSYSFGIGVDLSRLLRPRTH
Ga0209515_1002969533300027835GroundwaterMEFKPVSYLDFEFDYSRSIPLQLNNFSFGVSVDLGWLIRRRSRRH
Ga0209580_1001759213300027842Surface SoilDFKPVYYLDFEFDYSRSVPLQLNNYSFGIGINLSSLVRPRAH
Ga0209701_1003740613300027862Vadose Zone SoilADLVRDNGFNAGVDYKPVGYVDLEFDFSRSVPLQLNSYSFGIGVDLSWLLRPHAR
Ga0209701_1008649513300027862Vadose Zone SoilSSSVTSGSADLTRDNGYNAGIDYKPVDYLDLEFDFSRSVPLQLNSYSFGIGVDLSWLLRPRAH
Ga0209701_1070208613300027862Vadose Zone SoilFTTASVSTGAADLVRDNGFNAGIDYKPVGYLDLEFDFSRSVPLQLNSYSFGIGVDLSWLLRPHAH
Ga0209465_1013167423300027874Tropical Forest SoilGLVRDNGYEAGFDFKPAYYLDLEFDYSRSVPLQLNNYSFGIGINLSALVRPRSH
Ga0209283_1084864813300027875Vadose Zone SoilSSGGADLVRDNGFDAGIDYKPVGYLDLEFDFSRSIPLHLNSYSFGIGVDLSWLLRPHVH
Ga0209590_1010337223300027882Vadose Zone SoilDLVRDNGYNAGIDYKPVGYLDLEFDFSRSVPLHLNSYSLGIGVDLSWLLRPHVR
Ga0209590_1026849623300027882Vadose Zone SoilRCRASIDYKPVGYLDFEFDYSRSVPLQLNSYSFGIGVDLSWLLRPRVH
Ga0073994_1198885213300030991SoilFNAAIDYKPVSYLDLEFDFSRSVPLQLNSYSLGIGVDLSWLVRPPVH
Ga0306917_1150703813300031719SoilAKCGSSGPSQNRTGFTSSNVTSGGAGLVRDNGYEAGFDFKPVYYLDFEFDYSRSVPLHLNNYSFGIGVNLSSLVRPHAH
Ga0307475_1039163223300031754Hardwood Forest SoilYGYNAGIDYKPVGYLDLEFDFSRSVPLQLNSYSFGIGVDLSWLLRPRAH
Ga0307475_1055863313300031754Hardwood Forest SoilADLVRDNGFNAGIDYKPVGYLDLEFDYSRSVPLQLNSYSFGIGVDLSWLVRPRVH
Ga0318557_1016524713300031795SoilSSVTTGAADLVRDNGFNASADFKPVRHLDLEFDYSRSIPLHLNVFSFGVAVDLSRLLQKSHD
Ga0318557_1048292033300031795SoilGSADLVRDNGYEAGIDFKPVSYLDFEFDYSRSVPLSLNNYSFGIGINLSSLVRPRAH
Ga0318567_1084331613300031821SoilSVHCSATGPSNDRKGYLTSSVTTGAADLVRDNGFNASADFKPVRHLDLEFDYSRSIPLHLNVFSFGVAVDLSRLLQKSHD
Ga0306923_1094824823300031910SoilKFNDRKSYTTNSVTSGSADLVRDNGYSAGIDYKPIGYLDLEFDYSRSVPLHLNSYSFGIGVDLSWALHPHIYR
Ga0306921_1152285613300031912SoilADLVRDNGFNAGIDFKPTPHLDLEFDYSRSIPLQLNIFSFAVGVDLSWLLHPSAR
Ga0306926_1262999313300031954SoilKGYTANSVTSGSADLVRDNGYSSGIDYKPVGYLDLEFDYSRSVPLHLNSYSFGIGVDLSWALHPHIYR
Ga0307479_1128783313300031962Hardwood Forest SoilAADLVRDNGFNGGVDYKPVSYLDLEFDFSRSVPLQLNSYSFGIGIDLSWLLRPHVR
Ga0307479_1187292713300031962Hardwood Forest SoilGAADLVRDNGFNAGIDYKPVGYLDLEFDYSRSVPLQLNSYSFGIGVDLSWLLRPRVH
Ga0306920_10071404723300032261SoilLTSSVTTGAADLVRDNGFNASADFKPVRHLDLEFDYSRSIPLHLNVFSFGVAVDLSRLLQKSHD
Ga0306920_10331511113300032261SoilYEAGFDFKPVYYLDFEFDYSRSVPLHLNNYSFGIGVNLSSLVRPHAH
Ga0310914_1019333513300033289SoilVRDNGFNAGIDFKPTSHLDLEFDYSRSLPLQLNILSFGVGVDLSWLLHPSTR


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.