Metagenome / Metatranscriptome Family F044637

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F044637
Family Type	Metagenome / Metatranscriptome
Number of Sequences	154
Average Sequence Length	51 residues
Representative Sequence	MGDFEEVERLQAGIRTWLLRTARSGRHELRGISAPAVLPLLCAAAF
Number of Associated Samples	126
Number of Associated Scaffolds	154

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	80.92 %
% of genes near scaffold ends (potentially truncated)	96.10 %
% of genes from short scaffolds (< 2000 bps)	89.61 %
Associated GOLD sequencing projects	117
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (56.494 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (23.377 % of family members)
Environment Ontology (ENVO)	Unclassified (18.831 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.104 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.70% β-sheet: 0.00% Coil/Unstructured: 47.30%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 154 Family Scaffolds
PF08445	FR47	12.34
PF11716	MDMPI_N	4.55
PF00756	Esterase	3.90
PF00296	Bac_luciferase	3.90
PF07885	Ion_trans_2	1.95
PF00355	Rieske	1.95
PF00701	DHDPS	1.30
PF06941	NT5C	0.65
PF00005	ABC_tran	0.65
PF13673	Acetyltransf_10	0.65
PF03703	bPH_2	0.65
PF12833	HTH_18	0.65
PF02515	CoA_transf_3	0.65
PF13649	Methyltransf_25	0.65
PF12679	ABC2_membrane_2	0.65

COG ID	Name	Functional Category	% Frequency in 154 Family Scaffolds
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	3.90
COG0329	4-hydroxy-tetrahydrodipicolinate synthase/N-acetylneuraminate lyase	Cell wall/membrane/envelope biogenesis [M]	2.60
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	0.65
COG3402	Uncharacterized membrane protein YdbS, contains bPH2 (bacterial pleckstrin homology) domain	Function unknown [S]	0.65
COG3428	Uncharacterized membrane protein YdbT, contains bPH2 (bacterial pleckstrin homology) domain	Function unknown [S]	0.65
COG4502	5'(3')-deoxyribonucleotidase	Nucleotide transport and metabolism [F]	0.65

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	56.49 %
Unclassified	root	N/A	43.51 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	56.49 %
Unclassified	root	N/A	43.51 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	56.49 %
Unclassified	root	N/A	43.51 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	48.70 %
Unclassified	root	N/A	43.51 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	48.05 %
Unclassified	root	N/A	43.51 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	44.16 %
Unclassified	root	N/A	43.51 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.51 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	19.48 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	5.84 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	5.19 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.30 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.95 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.95 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.65 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.65 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.51 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	19.48 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.84 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	5.19 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.30 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.95 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.95 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.65 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.65 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.51 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	19.48 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.84 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	2.60 %
Mycolicibacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium	2.60 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.30 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.95 %
unclassified Acidimicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae	0.65 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.65 %
Blastococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus	0.65 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.51 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	19.48 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.84 %
Mycolicibacterium confluentis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium confluentis	2.60 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	2.60 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.30 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.95 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	0.65 %
unclassified Blastococcus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus	0.65 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.65 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.51 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	19.48 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.84 %
Mycolicibacterium confluentis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium confluentis	2.60 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	2.60 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.30 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.95 %
Blastococcus sp. CT_GayMR16	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus → Blastococcus sp. CT_GayMR16	0.65 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	0.65 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.65 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.65 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001471\|JGI12712J15308_10171979	Not Available	564	Open in IMG/M
3300001593\|JGI12635J15846_10170330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1471	Open in IMG/M
3300004092\|Ga0062389_102468478	Not Available	689	Open in IMG/M
3300004092\|Ga0062389_103299191	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300004633\|Ga0066395_10986869	Not Available	513	Open in IMG/M
3300005333\|Ga0070677_10726086	Not Available	561	Open in IMG/M
3300005336\|Ga0070680_100888781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	768	Open in IMG/M
3300005354\|Ga0070675_100640426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	966	Open in IMG/M
3300005364\|Ga0070673_100089839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2508	Open in IMG/M
3300005434\|Ga0070709_10468927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	951	Open in IMG/M
3300005436\|Ga0070713_100420937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1250	Open in IMG/M
3300005436\|Ga0070713_100599456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1046	Open in IMG/M
3300005437\|Ga0070710_10108622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1663	Open in IMG/M
3300005437\|Ga0070710_10151552	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1430	Open in IMG/M
3300005457\|Ga0070662_100033652	All Organisms → cellular organisms → Bacteria	3611	Open in IMG/M
3300005467\|Ga0070706_100540589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1084	Open in IMG/M
3300005546\|Ga0070696_100698827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	826	Open in IMG/M
3300005549\|Ga0070704_100677630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	912	Open in IMG/M
3300005558\|Ga0066698_10791792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	615	Open in IMG/M
3300005563\|Ga0068855_101355338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	735	Open in IMG/M
3300005591\|Ga0070761_10554070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	713	Open in IMG/M
3300005602\|Ga0070762_10378599	Not Available	908	Open in IMG/M
3300005610\|Ga0070763_10848357	Not Available	542	Open in IMG/M
3300005610\|Ga0070763_10858779	Not Available	538	Open in IMG/M
3300005764\|Ga0066903_104017886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	788	Open in IMG/M
3300006102\|Ga0075015_100076538	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1640	Open in IMG/M
3300006175\|Ga0070712_100462240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus → Blastococcus sp. CT_GayMR16	1058	Open in IMG/M
3300006176\|Ga0070765_101399617	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300006176\|Ga0070765_101415711	Not Available	655	Open in IMG/M
3300006176\|Ga0070765_101457298	Not Available	645	Open in IMG/M
3300006804\|Ga0079221_10063035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium confluentis	1705	Open in IMG/M
3300009101\|Ga0105247_11852793	Not Available	503	Open in IMG/M
3300009176\|Ga0105242_10282335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1508	Open in IMG/M
3300009177\|Ga0105248_12928475	Not Available	544	Open in IMG/M
3300009520\|Ga0116214_1021887	All Organisms → cellular organisms → Bacteria	2284	Open in IMG/M
3300009521\|Ga0116222_1399464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	598	Open in IMG/M
3300009524\|Ga0116225_1306305	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300009839\|Ga0116223_10050998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2702	Open in IMG/M
3300010376\|Ga0126381_104251342	Not Available	555	Open in IMG/M
3300010400\|Ga0134122_10100175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2293	Open in IMG/M
3300010401\|Ga0134121_10656773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	989	Open in IMG/M
3300010876\|Ga0126361_10199705	Not Available	803	Open in IMG/M
3300010880\|Ga0126350_10221580	Not Available	1028	Open in IMG/M
3300010880\|Ga0126350_10723900	Not Available	561	Open in IMG/M
3300012198\|Ga0137364_10324543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1146	Open in IMG/M
3300012210\|Ga0137378_10804912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	852	Open in IMG/M
3300012349\|Ga0137387_10448967	Not Available	935	Open in IMG/M
3300012509\|Ga0157334_1042114	Not Available	600	Open in IMG/M
3300012924\|Ga0137413_10273546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1169	Open in IMG/M
3300012971\|Ga0126369_11831656	Not Available	695	Open in IMG/M
3300012986\|Ga0164304_11288582	Not Available	594	Open in IMG/M
3300013105\|Ga0157369_12377616	Not Available	537	Open in IMG/M
3300016387\|Ga0182040_10391274	All Organisms → cellular organisms → Bacteria	1088	Open in IMG/M
3300016422\|Ga0182039_12238767	Not Available	504	Open in IMG/M
3300017822\|Ga0187802_10340168	Not Available	588	Open in IMG/M
3300017926\|Ga0187807_1248784	Not Available	582	Open in IMG/M
3300017943\|Ga0187819_10193163	Not Available	1203	Open in IMG/M
3300017943\|Ga0187819_10613786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	616	Open in IMG/M
3300017959\|Ga0187779_10143726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1467	Open in IMG/M
3300017959\|Ga0187779_10438109	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300017970\|Ga0187783_10055231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	2927	Open in IMG/M
3300017973\|Ga0187780_11436348	Not Available	509	Open in IMG/M
3300017975\|Ga0187782_10693307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	785	Open in IMG/M
3300017975\|Ga0187782_10894167	Not Available	689	Open in IMG/M
3300017975\|Ga0187782_11606264	Not Available	514	Open in IMG/M
3300017993\|Ga0187823_10230728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	619	Open in IMG/M
3300017995\|Ga0187816_10226870	Not Available	814	Open in IMG/M
3300018007\|Ga0187805_10120819	Not Available	1188	Open in IMG/M
3300018007\|Ga0187805_10202199	Not Available	907	Open in IMG/M
3300018037\|Ga0187883_10494450	Not Available	630	Open in IMG/M
3300018086\|Ga0187769_10278606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1248	Open in IMG/M
3300018086\|Ga0187769_11311325	Not Available	548	Open in IMG/M
3300018433\|Ga0066667_10348587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1176	Open in IMG/M
3300018468\|Ga0066662_10537312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium confluentis	1076	Open in IMG/M
3300019890\|Ga0193728_1239752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	734	Open in IMG/M
3300021171\|Ga0210405_10084753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2498	Open in IMG/M
3300021171\|Ga0210405_10586537	Not Available	869	Open in IMG/M
3300021401\|Ga0210393_10907853	Not Available	715	Open in IMG/M
3300021406\|Ga0210386_10254779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1497	Open in IMG/M
3300021406\|Ga0210386_11083684	Not Available	681	Open in IMG/M
3300021406\|Ga0210386_11296207	Not Available	613	Open in IMG/M
3300021407\|Ga0210383_10592802	Not Available	955	Open in IMG/M
3300021433\|Ga0210391_11528498	Not Available	511	Open in IMG/M
3300021474\|Ga0210390_10548277	Not Available	972	Open in IMG/M
3300021478\|Ga0210402_10097273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2638	Open in IMG/M
3300021478\|Ga0210402_10363754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1343	Open in IMG/M
3300024331\|Ga0247668_1045244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	897	Open in IMG/M
3300025898\|Ga0207692_10296148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	983	Open in IMG/M
3300025900\|Ga0207710_10327401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	778	Open in IMG/M
3300025906\|Ga0207699_10933694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	641	Open in IMG/M
3300025910\|Ga0207684_11322597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	593	Open in IMG/M
3300025916\|Ga0207663_10269710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium confluentis	1260	Open in IMG/M
3300025916\|Ga0207663_10717871	Not Available	792	Open in IMG/M
3300025916\|Ga0207663_10734675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	783	Open in IMG/M
3300025920\|Ga0207649_10408691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1017	Open in IMG/M
3300025929\|Ga0207664_10981579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	757	Open in IMG/M
3300025934\|Ga0207686_10091289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2011	Open in IMG/M
3300025937\|Ga0207669_11161827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	653	Open in IMG/M
3300025938\|Ga0207704_11000359	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	707	Open in IMG/M
3300026041\|Ga0207639_11654331	Not Available	600	Open in IMG/M
3300026118\|Ga0207675_101093192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	817	Open in IMG/M
3300027029\|Ga0208731_1032765	Not Available	569	Open in IMG/M
3300027765\|Ga0209073_10063332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1241	Open in IMG/M
3300027787\|Ga0209074_10295766	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium confluentis	645	Open in IMG/M
3300027855\|Ga0209693_10540963	Not Available	554	Open in IMG/M
3300027889\|Ga0209380_10433037	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300027905\|Ga0209415_10083683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3649	Open in IMG/M
3300027911\|Ga0209698_11321937	Not Available	527	Open in IMG/M
3300028072\|Ga0247675_1033707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	749	Open in IMG/M
3300028828\|Ga0307312_10119681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1649	Open in IMG/M
3300028906\|Ga0308309_10133866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1972	Open in IMG/M
3300030730\|Ga0307482_1021346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1351	Open in IMG/M
3300030743\|Ga0265461_10366235	All Organisms → cellular organisms → Bacteria	1073	Open in IMG/M
3300030763\|Ga0265763_1046124	Not Available	538	Open in IMG/M
3300030906\|Ga0302314_10606375	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1143	Open in IMG/M
3300031170\|Ga0307498_10129171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	815	Open in IMG/M
3300031199\|Ga0307495_10043844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	887	Open in IMG/M
3300031564\|Ga0318573_10091456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1550	Open in IMG/M
3300031708\|Ga0310686_104507348	Not Available	905	Open in IMG/M
3300031708\|Ga0310686_105067278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	938	Open in IMG/M
3300031708\|Ga0310686_111637586	Not Available	554	Open in IMG/M
3300031708\|Ga0310686_113343872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4786	Open in IMG/M
3300031708\|Ga0310686_117631452	Not Available	703	Open in IMG/M
3300031748\|Ga0318492_10164421	Not Available	1124	Open in IMG/M
3300031765\|Ga0318554_10398273	Not Available	781	Open in IMG/M
3300031778\|Ga0318498_10201636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	902	Open in IMG/M
3300031782\|Ga0318552_10044375	All Organisms → cellular organisms → Bacteria	2089	Open in IMG/M
3300031797\|Ga0318550_10196271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	976	Open in IMG/M
3300031805\|Ga0318497_10285988	Not Available	917	Open in IMG/M
3300031805\|Ga0318497_10852523	Not Available	511	Open in IMG/M
3300031821\|Ga0318567_10252142	Not Available	991	Open in IMG/M
3300031835\|Ga0318517_10365837	Not Available	652	Open in IMG/M
3300031845\|Ga0318511_10554340	Not Available	534	Open in IMG/M
3300031846\|Ga0318512_10541238	Not Available	592	Open in IMG/M
3300031860\|Ga0318495_10153311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1039	Open in IMG/M
3300031910\|Ga0306923_12205517	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300032008\|Ga0318562_10094193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1693	Open in IMG/M
3300032009\|Ga0318563_10160949	Not Available	1206	Open in IMG/M
3300032009\|Ga0318563_10370213	All Organisms → cellular organisms → Bacteria → Terrabacteria group	775	Open in IMG/M
3300032010\|Ga0318569_10180708	Not Available	976	Open in IMG/M
3300032044\|Ga0318558_10543421	Not Available	580	Open in IMG/M
3300032074\|Ga0308173_11133442	Not Available	730	Open in IMG/M
3300032076\|Ga0306924_10589095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1259	Open in IMG/M
3300032090\|Ga0318518_10681083	Not Available	523	Open in IMG/M
3300032160\|Ga0311301_10574911	Not Available	1636	Open in IMG/M
3300032160\|Ga0311301_11078083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	1049	Open in IMG/M
3300032174\|Ga0307470_11661402	Not Available	536	Open in IMG/M
3300032805\|Ga0335078_10906751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1058	Open in IMG/M
3300032829\|Ga0335070_11870756	Not Available	542	Open in IMG/M
3300032896\|Ga0335075_10256550	All Organisms → cellular organisms → Bacteria	2008	Open in IMG/M
3300033004\|Ga0335084_10075947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3482	Open in IMG/M
3300033290\|Ga0318519_10594388	Not Available	672	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.61%
Host-Associated	Host-Associated	10.39%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.17%
Plants	Host-Associated → Plants	10.39%
Aquatic	Environmental → Aquatic	8.44%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.52%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.79%
Freshwater	Environmental → Aquatic → Freshwater	7.14%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.60%
Sediment	Environmental → Aquatic → Sediment	1.30%
Peat	Environmental → Terrestrial → Peat	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.30%
Loam	Environmental → Terrestrial → Soil → Loam	20.78%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.44%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.90%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.90%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.60%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.30%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	27.27%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.48%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.04%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.74%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.44%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.60%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.95%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.95%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.95%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.30%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.65%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.38%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.79%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	6.49%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.84%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	5.19%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.55%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.60%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.60%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.95%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.95%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.95%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.95%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.30%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.30%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.30%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.30%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.30%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.30%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.30%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.30%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.30%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.30%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.65%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.65%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.65%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012509	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_6	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300024331	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027029	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF045 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028072	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK16	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300030763	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030906	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12712J15308_101719792	3300001471	Forest Soil	LGDFEEVVRLQAGIREWLLRTARNGRHDLRGIPAPAVLPLLCAAA
JGI12635J15846_101703303	3300001593	Forest Soil	LGDFEEVERLQAGIRDWLLRSARNGRHELRGIPATGMLP
Ga0062389_1024684782	3300004092	Bog Forest Soil	LGDFEEVVRLQAGIREWLLRSARNGRHELRGIPASAVLPLLCAA
Ga0062389_1032991911	3300004092	Bog Forest Soil	LGDFEEVLRLQAGIRDWLLRTARHGRHDLRGLPAAAVLPLLCTAAFGPALTEAAELGGARAVAR
Ga0066395_109868692	3300004633	Tropical Forest Soil	VGDFKEVERLQAGIRGWLLRTARSGRHELRGIDVLPMLCAAAFG
Ga0070677_107260861	3300005333	Miscanthus Rhizosphere	MGDFEEVERLQAGIRTWLLRTARSGRHELRGISAPAVLPMLCAAAF
Ga0070680_1008887812	3300005336	Corn Rhizosphere	MGDFEEVERLQAGIRTWLLRTARNGRHELRGISAPAVLPMLCA
Ga0070675_1006404261	3300005354	Miscanthus Rhizosphere	MGDFEEVERLQAGIRTWLLRTVRSGRHELRGISAPAVLPMLCAAAFG
Ga0070673_1000898394	3300005364	Switchgrass Rhizosphere	MGNFEEVERLQAGIRTWLLRTARSGRHELRGISAPAVLPMLCAAAFGPALADADGPAPGL
Ga0070709_104689271	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MGAFEEVERLQAGIRAWLLRTARSGRHDLRGIDGPAVLPLLCAA
Ga0070713_1004209373	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MGDFEEVERLQAGIRAWLLRTARSGRHDLRGIDGPAVLPLLCA
Ga0070713_1005994561	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MGDFEEVERLQAGIRTWLLRTARSGRHELRGISAPAVLPMLC
Ga0070710_101086223	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MGAFEEVERLQAGIRAWLLRTARSGRHDLRGIDGPAVLPLLCAAAFGPAL
Ga0070710_101515521	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MGDFEEVERLQAGIRAWLLRTARSGRHDLRGIDGPAVLPLLCAAAFGPAL
Ga0070662_1000336521	3300005457	Corn Rhizosphere	MGDFEEVERLQAGIRTWLLRTARSGRHELRGISAPAVLPMLCAAAFGPALA
Ga0070706_1005405891	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MGDFEEVERLQAGIRTWLLRAARSGRHELRGISAPAVLPLL
Ga0070696_1006988271	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MGDFEEVERLQAGIRTWLLRTTRSGRHELRGISAPAVLPMLCAAAFGPALPDADGPA
Ga0070704_1006776303	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MGNFEEVERLQAGIRTWLLRTARSGRHELRGISAPAVLPMLCAAAFGPALA
Ga0066698_107917921	3300005558	Soil	MGDFEEVERLQAGIRTWLSRTARNGRHELRGISAP
Ga0068855_1013553381	3300005563	Corn Rhizosphere	MGDFEEVERLQAGIRTWLLRTARNGRHELRGISAPAVLPMLCAAAFGPALAD
Ga0070761_105540702	3300005591	Soil	LGDFEEVERLQAGIREWLLRSARNGRHELRGIPAAGLLPLLCAAAFGPVLADASDLASAA
Ga0070762_103785991	3300005602	Soil	VGVAGLGGFEEVVRLQAGIREWLLRTARNDRHELRGIPAPAVLPLLCAA
Ga0070763_108483572	3300005610	Soil	VGDFEEVERLQAGIRTWLLRTARSDRHELRDIGAPAVLPLLCAAAFGPALADSMAQ
Ga0070763_108587792	3300005610	Soil	VGVAGLGDVEEVVRLQAGIRQWLLRTARNGRHELRGIPAPAVLPL
Ga0066903_1040178861	3300005764	Tropical Forest Soil	VGDFEEVERLQAAIRGWLLRMARSGRHDLRGISAPAVLPWLCAAAFGPAMADADGPASA
Ga0075015_1000765383	3300006102	Watersheds	VGDFEEVERLQAGIRTWLLRTARSGRHELRDLGAPAVLPLLCAAAF
Ga0070712_1004622401	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MGDFEEVERLQAGIRAWLLRTARSGRHDLRGIDGPAV
Ga0070765_1013996172	3300006176	Soil	VRVGVEGLGDFEEVLRLQAGIREWLLRAARHGRRELRGLPAPAVLPLLCAAALGPALADAAGLDGAT
Ga0070765_1014157111	3300006176	Soil	VGDFEEVERLQAGIRTWLLGTARSDRHELRDIGAPAVLPLLCAAAFGPALADSMAQAGVARLE
Ga0070765_1014572982	3300006176	Soil	LGCYGHVGVAGLGDFEEVVRLQAGIREWLLRTARNGRHELRGIPAPAVLPLLCAAAFGPALTEAADLGG
Ga0079221_100630351	3300006804	Agricultural Soil	VGDFEEVERLQAGIRSWLLRSVRSDRQELRHGGGAAMLRLLCAAAFAPA
Ga0105247_118527931	3300009101	Switchgrass Rhizosphere	MGDFEEVERLQAGIRTWLLQTARSGRHELHGISARAVLPMLCAAA
Ga0105242_102823353	3300009176	Miscanthus Rhizosphere	MGNFEEVERLQAGIRTWLLRTARSGRHELRGISAPAVLPMLCAAAFGPALADAGGPAPRVRRPPG*
Ga0105248_129284752	3300009177	Switchgrass Rhizosphere	MGDFEEVERLQAGIRTWLLRTARSGRHELRGISAPAVLPMLCAAAFG
Ga0116214_10218874	3300009520	Peatlands Soil	VGDFDEVERLQAGIRTWLLRTARSGRHELRDVGAATVLPLLCAAAFGPALADGSAPAADG
Ga0116222_13994641	3300009521	Peatlands Soil	VGDFDEVERLQAGIRTWLLRTARSGRHELRDMGAPAVLPLLCAAAFGPALADGSTARGAGLA
Ga0116225_13063052	3300009524	Peatlands Soil	VGDFDEVERLQAGIRTWLLRTARSGRHELRDMGAPAVLPLLCAAAFGPALADGSTA
Ga0116223_100509981	3300009839	Peatlands Soil	VGDFEEVERLQAGIRTWLLRTARSGRHELRDMGAPAVLPLLCAAAFGPALA
Ga0126381_1042513421	3300010376	Tropical Forest Soil	VKGLGDFEGVVQLQAGIREWLLRAARNGRHELRGMPAPAVLPLLCAAAFGSAITEAVAEL
Ga0134122_101001751	3300010400	Terrestrial Soil	MGDFEEVERLQAGIRTWLLRTERSGRHELRGISAPAVL
Ga0134121_106567733	3300010401	Terrestrial Soil	MGDFEEVERLQAGIRAWLLRTARSGRHDLRGIDGPAVLPLLCAAAFGPVLADADG
Ga0126361_101997051	3300010876	Boreal Forest Soil	VGDFDEVERLQAGIRTWLLRTARNGRHELRDIGAPAVLPLLCAAAFGPALADGPGSAADGLGSAADGL
Ga0126350_102215803	3300010880	Boreal Forest Soil	VAGLGDFEEVVRLQAGVREWLLRTARNGRDELRGIPAPAVLPLLCAAAFGPALTED
Ga0126350_107239001	3300010880	Boreal Forest Soil	VGDFDEVERLQAGIRTWLLRTARNGRHELRDIGAPAVLPLLCAAAFGPALADGPGSAADGLGSAAGAAG
Ga0137364_103245431	3300012198	Vadose Zone Soil	LVGDFEEVERLRAGIRTWLLRTARSGRHELRGIDGPAVLPLLCAAAFGPALADADGP
Ga0137378_108049121	3300012210	Vadose Zone Soil	LVGDFEEVERLRAGIRTWLLRTARSGRHELRGISAPAMLP
Ga0137387_104489671	3300012349	Vadose Zone Soil	VGDFEEVERLQAGIRAWLLRTARTGRRELRGIGAPAVLPLLCAAAFGPG
Ga0157334_10421142	3300012509	Soil	MGDFEEVERLQAGIRTWLLRTARSGRHELRGISAPAVLPMLCAAAFGPALADADG
Ga0137413_102735461	3300012924	Vadose Zone Soil	MGDFEEVDRLQAGIRTWLLRTARSGRHELRGISAPAVLPLLCGAAFGPALADADGPAPGLAR
Ga0126369_118316561	3300012971	Tropical Forest Soil	VGDFEEVERLQAAIRAWLLQMARSGRHDLRGISAPAVLPWLCAAAF
Ga0164304_112885822	3300012986	Soil	MGDFEEVERLQAGIRTWLLQTARSGRHELHGISARAVLPMLCAAAFGPALADA
Ga0157369_123776162	3300013105	Corn Rhizosphere	MGDFEEVERLQAGIRTWLLRTARSGRHELRGISAPA
Ga0182040_103912741	3300016387	Soil	LEQVVQLQAGIREWLLRAARNGRHELRGIPAPAVPPL
Ga0182039_122387671	3300016422	Soil	LGDLEEVARLQAGIREWLLRAARNGCHELRGLPAPAVLPLLCAAAFGPTLTEA
Ga0187802_103401681	3300017822	Freshwater Sediment	VKGLGDFEEVVRLQAGIREWLLRAARNGRHELRGVPAPAVLPLLCAAAFGPTLA
Ga0187807_12487842	3300017926	Freshwater Sediment	MGDFEEVERLQAGIREWLLRTSRNGRHELRDIQAPAVPPLLCAAAFSPALATS
Ga0187819_101931631	3300017943	Freshwater Sediment	LGDFEEVVRLQAGIREWLLRAARNGRHELRGVPAPAV
Ga0187819_106137861	3300017943	Freshwater Sediment	VEGLGDFEEVVRLQAGIREWLLRAARNGRHELRGVPASAVLPLLCAAAFGPTLAGVADLRGAAA
Ga0187779_101437263	3300017959	Tropical Peatland	VGDFEEVERLRAGIRTWLLRSARSGRHDVLDGDAGMLPLLCAAAFGPALAAR
Ga0187779_104381092	3300017959	Tropical Peatland	LGDLEEVERVQAGIGEWLRRMARSGRHELRGIPASAVLPLLCAAAFGPALADACD
Ga0187783_100552311	3300017970	Tropical Peatland	MGDFEEVERLQAGIREWLLRTSRNGRHELRDVQAPAVLPLLCAAAFSPALATSGDLASSPAVARI
Ga0187780_114363481	3300017973	Tropical Peatland	LGDFEGVVRLQAGIREWLLRAARNGRHELRGVPAPAVLPLLCAAAFGPVLAEAADLGGAAAVARAG
Ga0187782_106933072	3300017975	Tropical Peatland	MGDLEEVERLQAGIREWLLRTAQNGRHELRGIPASHRMAVKM
Ga0187782_108941672	3300017975	Tropical Peatland	MGDFEEVERLQAGIREWLLRTTRNGRHELRGIQAQAVLPSLCAAAFG
Ga0187782_116062642	3300017975	Tropical Peatland	MGDFEEVERLQAGIREWLLRTSRNGRHELRDIQAPA
Ga0187823_102307282	3300017993	Freshwater Sediment	MGDFEEVERLQAGIRAWLLRTARSGRHDLRGIDGPAVLPLLCAAAFG
Ga0187816_102268701	3300017995	Freshwater Sediment	LGDFEEVVRLQAGIREWLLRAARNGRHELRGVPAPA
Ga0187805_101208191	3300018007	Freshwater Sediment	VGDFDEVERLQAGIRTWLLRTARSGRHELRDMGAPAVLPLLCAAAFGPALTDG
Ga0187805_102021993	3300018007	Freshwater Sediment	LGDFEEVVRLQAGIREWLLRAARNGRHELRGVPAPAVLPLLCAAAFGPTL
Ga0187883_104944502	3300018037	Peatland	VGDFDEVERLRAGIRGWLLRSVRSDRQELRHGGGSALLRLLCAAAFGPALAGSGSHGTGA
Ga0187769_102786061	3300018086	Tropical Peatland	LGDLEEVEQVQAGIREWLHRTASGGRHELRGIPASAVLPLLCAAAFGPALADASDLTSAAAVAGIG
Ga0187769_113113252	3300018086	Tropical Peatland	LGDLGVEQVQAAIREWLHRTASGGRHELRGIPASAVLPLLCAAAFGPALADASDLTSAAAVAGIG
Ga0066667_103485871	3300018433	Grasslands Soil	MGAFEEVERLQAGIRAWLLRTARSGRHDLRGIDGPAVLPLLCAAAF
Ga0066662_105373121	3300018468	Grasslands Soil	MCRGILVGDFEEVEHLRAGIRSWLLRSARSGRQDLRGGGGSAMLPVL
Ga0193728_12397521	3300019890	Soil	MGDFEEVERLQAGIRTWLLRTARSGRHELRGISAPAVLPLLCAAAF
Ga0210405_100847532	3300021171	Soil	MGDFEEVERLQASIRTWLMRTTRSGRHELRGISAAAVLPLL
Ga0210405_105865372	3300021171	Soil	VGEFDEVERLQAGIRTWLLRTARSGRHELRDAGAADVLPLLCAAAF
Ga0210393_109078532	3300021401	Soil	VGVAGLGDFEEVVRLQAGIREWLLRTARNGRHELRGIPAPAVLPLLCAAAFGPALTEAADLGGTAALARVGV
Ga0210386_102547793	3300021406	Soil	VGVAGLGDFEEVVRLQAGIREWLLRTARNGRHELRGIPAPAVLPLLCAAAFGPALTEAAD
Ga0210386_110836842	3300021406	Soil	MGNFEEVERLQAGIREWLLRTARNGRHELRSIPALAVLPLLCAAAFGPELA
Ga0210386_112962071	3300021406	Soil	VGVAGLGDFEEVVRLQAGIRQWLLRTARNGRHELRGIPAPAVLPLLCAAAFGPALTEAA
Ga0210383_105928022	3300021407	Soil	LGDFEEVVRLQAGIRQWLLRTGRNGRHELRGIPAPAVLPLLCAAAFGPALTEAADLSGA
Ga0210383_110619872	3300021407	Soil	VGVEGLGDLEEVVRLQAGIREWLLRAARNGRHELRDIPAPAVLPLLCAAAFGPTLTEAADLDVAVAVARVMVLS
Ga0210391_115284982	3300021433	Soil	LGDFEEVERLQAGIRDWLLRSARNGRHELRGIPATGMLPLLCAAAF
Ga0210390_105482771	3300021474	Soil	VCRGSLVGDFEEVERLQAGIRTWLLGTARSGRHELRDIGAPAVLP
Ga0210402_100972731	3300021478	Soil	MGDFEEVERLQASIRTWLMRTARSGRHELRGISAPAMLPLLCGAAFGPVLADA
Ga0210402_103637543	3300021478	Soil	VGVAGLGDFEEVVRLQAGIRQWLLRTARNGRHELRGIPAPAVLPLLCAAAFGPALTEAADLGGAAA
Ga0247668_10452443	3300024331	Soil	MGDFEEVERLQAGIRTWLLRTARNGRHELRGISAPAVLPMLCAAAFGPAL
Ga0207692_102961482	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MGDFEEVERLQAGIRAWLLRTARSGRHDLRGIDGPAVLPLLCAAAFGPVL
Ga0207710_103274011	3300025900	Switchgrass Rhizosphere	MGNFEEVERLQAGIRTWLLRTARSGRHELRGISAPAVLPMLCAAAFGPALADA
Ga0207699_109336941	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MGDFEEVERLQAGIRTWLLRTARSGRHEPRGISAPAVLPMLCAA
Ga0207684_113225971	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MGDFEEVERLQAGIRTWLLRTTRSGRHELRGISAPAVLPM
Ga0207663_102697101	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VGDFEEVERLQAGIRSWLLRSVRSDRQELRHGGGAAMLRL
Ga0207663_107178711	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MGDFEEVERLQAGIRAWLLRTARSGRHDLRGIDGPAVLPLLCAAAFGPVLA
Ga0207663_107346752	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VCGESLMGDFEEVERLQAGIRAWLLRTARSGRHDLRGIDGPAVLPLLCAAAFG
Ga0207649_104086911	3300025920	Corn Rhizosphere	MGDFEEVERLQAGIRTWLLRTTRSGRHELRGISAPAVL
Ga0207664_109815792	3300025929	Agricultural Soil	MGDLEEVERLQAGIRTWLLQTARSGRHELHGISARAVL
Ga0207686_100912891	3300025934	Miscanthus Rhizosphere	MGNFEEVERLQAGIRTWLLRTARSGRHELRGISAPAVLPMLCAAAFGPALADAGGPAP
Ga0207669_111618271	3300025937	Miscanthus Rhizosphere	MGNFEEVERLQAGIRTWLLRTARSGRHELRGISAPAVLPMLCAAA
Ga0207704_110003592	3300025938	Miscanthus Rhizosphere	MGDFEEVERLQAGIRTWLLRTARSGRHELRGISAPAVL
Ga0207639_116543312	3300026041	Corn Rhizosphere	MGDFEEVERLQAGIRTWLLRTARSGRHELRGISAPAVLPMLCAAAFGPA
Ga0207675_1010931922	3300026118	Switchgrass Rhizosphere	MGDFEEVERLQAGIRTWLLRTVRSGRHELRGISAPAVLPMLCAAAFGP
Ga0208731_10327652	3300027029	Forest Soil	MGDFEEVERLQAGIREWLLRTARNDRHELRGIPAPAVLPLLCAAAFGS
Ga0209073_100633323	3300027765	Agricultural Soil	MGDFEEVERLQAGIRTWLLRTARSGRHELRGISAPAVLPLLCAAAFGPALADAE
Ga0209074_102957661	3300027787	Agricultural Soil	VGDFEEVERLQAGIRSWLLRSVRSDRQELRHGGGAAMLRLLCAAAFA
Ga0209693_105409631	3300027855	Soil	MCRGSLVGDFEEVERLQAGIRTWLLRTARSGRHELRDIDAPAVLPLLCAAAFGPALADGLAPAADVAGLG
Ga0209380_104330371	3300027889	Soil	LGDFEEVERLQAGIRDWLLRSARNGRHELRGIPATGMLPLLCAAAFGPVLADASDLASAAAVRRIGVL
Ga0209415_100836831	3300027905	Peatlands Soil	VGDFDEVERLQAGIRTWLLRTARSGRHELRDMGAPAVLPLLCAAAFGPALAGGS
Ga0209698_113219372	3300027911	Watersheds	LGDLEEVVRLQAGIREWLLRAARNGRHELRDIPAPAVLPLL
Ga0247675_10337071	3300028072	Soil	MGNFEEVERLQAGIRTWLLRTARSGRHELRGISAPAVLPMLCAAAFGPALADADGPE
Ga0307312_101196814	3300028828	Soil	MGDFEEVERLQAGIRTWLLRTARSGRHELHGISAPAVLPLL
Ga0308309_101338663	3300028906	Soil	LGDFEEVERLQAGIRDWLLRSARNGRHELRGIPATGMLPLLCAAAFGPVLADASDLASAAAVRRI
Ga0307482_10213463	3300030730	Hardwood Forest Soil	VGVAGLGDFEEVARLQAGIREWLLRTARNGRHELRGIPAPAVLPLLCAA
Ga0265461_103662352	3300030743	Soil	LGDFEEVLRLQAGIRDWLLRSARHGRHELRCLPAAAVPPL
Ga0265763_10461241	3300030763	Soil	VCRGSLVGEFEEVERLQAGIRTWLLRTARSGRHELRDIDAAAVLPLLCAV
Ga0302314_106063753	3300030906	Palsa	MGDFDDAARLRAGIREWVLRTARSGRHELGDMPPVTVVSLLCAAAFGPVIG
Ga0307498_101291713	3300031170	Soil	MGDFEEVERLQAGIRTWLLRTARSGRHELRGISAQAVLPLLCAAAFGPALADA
Ga0307495_100438441	3300031199	Soil	MGDFEEVERLQAGIRTWLLRTARSGRHELRGISAQAELPLLCAAAFGP
Ga0318573_100914563	3300031564	Soil	VGDFEEVERLRAGIRGWLLRTARSGRHDLRDISAPAILPLLCAAAFGPALGDAAPGGSA
Ga0310686_1045073481	3300031708	Soil	MGDFEEVERLQAGIREWLLRTSRNGRHELRDIRAPAVLPLLCAAAFGSALATSG
Ga0310686_1050672781	3300031708	Soil	MVGDFEEVERLQADIREWVLRTVRSGRHELRDVPARAVLPLLCAAAFGAAL
Ga0310686_1116375862	3300031708	Soil	MGDFEEVERLQAGIREWLLRTSRNGRRELRDIQAPAVLPLLCAAAFGSALATSGD
Ga0310686_1133438727	3300031708	Soil	MCRGSLVGDFEEVERLQAGIRTWLLRTAWSGRHELRDIDAPAVLPLLCAAAFGPALA
Ga0310686_1176314521	3300031708	Soil	VLWHVGVAGLGDFEEVVQLQAGIREWLLRTARNGRHELRDIPAPAVLPLLCAAAFGPALTEAAD
Ga0318492_101644211	3300031748	Soil	MGTWGWQELGDFEEVVRLQAGIREWLLRAARNGRHELRGMPAPAAFGLLPLLCAAAFGSAFTK
Ga0318554_103982732	3300031765	Soil	MGTWGWQELGDFEEVVRLQAGIREWLLRAARNGRHELRGMPAPAAFGLLPLLC
Ga0318498_102016363	3300031778	Soil	VGVEGLGDFEEVEGLRAGIREWLRRTARSNGHELSGMPASAVLPLLCAA
Ga0318552_100443753	3300031782	Soil	MGTWGWQELGDFEEVVRLQAGIREWLLRAARNGRHELRGIPAPAVLPLLCAAAFGPAFTEAA
Ga0318550_101962713	3300031797	Soil	VGDFEEVERLQAGIRGWLLRTARNGRHELRGIGAPAVLPLLCAAAFGPAL
Ga0318497_102859882	3300031805	Soil	LGDFEEVVRLQAGIREWLLRTARHGRHELRGIPAPAVLPLL
Ga0318497_108525231	3300031805	Soil	VGDFEEVERLQAGIRAWLLRSARSGRHDLRTGGAGLLPLLCASAFGPALADRPDNSA
Ga0318567_102521421	3300031821	Soil	LGDFEEVVRLQAGIREWLLRAARNGRHELRGIPAPAVPPLLCAAAFGPMLCEAAGLGGVDLG
Ga0318517_103658372	3300031835	Soil	MGTWGWQELGDFEEVVRLQAGIREWLLRAARNGRHELRGMPAPAAFGLLPL
Ga0318511_105543401	3300031845	Soil	VQLQAGIRESLLRAARNGRHELRGMPAPAVLPLLCAAAFGPAFTEAANELGGA
Ga0318512_105412382	3300031846	Soil	MGDFEEVVQLQAGIREWPLRAARNGRHELRGIQAPAVLPLLCAAAFGPMLCEAAGLG
Ga0318495_101533111	3300031860	Soil	VGDFEEVERLQAAIRTWLLRMARNGRHDLRGISAPAVLPLLCGAAFGPAMADADGP
Ga0306923_122055172	3300031910	Soil	MWHVGVEGLGDFDEVVQLQAGIREWLRRAARNGRHDLRGMPAPAASGLLPLLCAAAFGPTLTAAAA
Ga0318562_100941933	3300032008	Soil	VGDFEEVERLQAGIRGWLLRTARNGRHELRGIGAPAVLPLLCAAAFGPALADSPAPGPAR
Ga0318563_101609491	3300032009	Soil	LGDLEEVARLQAGIREWLLRAGRNGRHELRDIPAPAVLPLLC
Ga0318563_103702132	3300032009	Soil	VGDFEEVERLQAGIRRWLQRSARSGRHELHDRGASAVLPLLCAAAFGPVLADVD
Ga0318563_104125971	3300032009	Soil	LGDFDEVVQLQAGIREWLRRAARNGRHDLRGMPAP
Ga0318569_101807081	3300032010	Soil	LGDFEEVVRLQAGIREWLLRAARNGRHELRGMPAPAAFG
Ga0318558_105434212	3300032044	Soil	VGDFEEVERLQAGIRGWLLRTARNGRHELRGIGAPAVLPLLCAAAF
Ga0308173_111334423	3300032074	Soil	VGDFEEVERLQAGIRSWLLRSVRSDRQELRHGGGAAMLRLLCAAAFAP
Ga0306924_105890953	3300032076	Soil	VGVEGLGDFEEVEGLRAGIREWLRRTARSNGHELSGIPASAVLPLLCAAAFGPELADAAN
Ga0318518_106810832	3300032090	Soil	VGDFEEVERLQAGIRAWLLRSARSGRHDLRTGGAGLLPL
Ga0311301_105749114	3300032160	Peatlands Soil	VCRGSLVGDFEEVERLQAGIRTWLLRTARSGRHEL
Ga0311301_110780833	3300032160	Peatlands Soil	MGNFEEVERLQAGIREWLLRTARNGRHELRSIPAPAVLPLLC
Ga0307470_116614022	3300032174	Hardwood Forest Soil	MGDFEEVERLQAGIRTWLLRTARSGRHELRGISAPAVLP
Ga0335078_109067513	3300032805	Soil	VGDFEEVERLQAGIRAWLLRMARSGHHDLRGISGQAVLPLLCAAAFGPALADADGPGPGLARM
Ga0335070_118707562	3300032829	Soil	MCRGSLVGDFEEVERLQAGIRGWLLRSVRSDRQELRHGGAAMLRLLCA
Ga0335075_102565501	3300032896	Soil	VKGLGDSEEVVRLQEGIREWLLRSARNGRHELREIPAPAVPPLLCAAAFGPVLADAAGLD
Ga0335084_100759475	3300033004	Soil	MGDFEEVERLQTGIRTWLLRTARSGRHELRGISAPAVLPLLCAAAF
Ga0318519_105943881	3300033290	Soil	LGDLEEVARLQAGIREWLLRAGRNGRHELRDIPAPAVLPLLCAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F044637

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences