Metagenome / Metatranscriptome Family F044605

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F044605
Family Type	Metagenome / Metatranscriptome
Number of Sequences	154
Average Sequence Length	48 residues
Representative Sequence	VDSASLHRRPRKIRRTGRHTTPSQVEKVAEKAGKAAPAVAIAGALVALP
Number of Associated Samples	133
Number of Associated Scaffolds	154

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	98.03 %
% of genes near scaffold ends (potentially truncated)	98.05 %
% of genes from short scaffolds (< 2000 bps)	92.86 %
Associated GOLD sequencing projects	124
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (51.299 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (14.935 % of family members)
Environment Ontology (ENVO)	Unclassified (16.883 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.052 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 37.66% β-sheet: 0.00% Coil/Unstructured: 62.34%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 154 Family Scaffolds
PF01575	MaoC_dehydratas	46.10
PF00300	His_Phos_1	3.90
PF03795	YCII	1.30
PF13193	AMP-binding_C	1.30
PF01522	Polysacc_deac_1	0.65
PF13091	PLDc_2	0.65
PF04248	NTP_transf_9	0.65
PF02861	Clp_N	0.65
PF13489	Methyltransf_23	0.65
PF13581	HATPase_c_2	0.65

COG ID	Name	Functional Category	% Frequency in 154 Family Scaffolds
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.30
COG0542	ATP-dependent Clp protease, ATP-binding subunit ClpA	Posttranslational modification, protein turnover, chaperones [O]	0.65
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	0.65
COG2343	Uncharacterized conserved protein, DUF427 family	Function unknown [S]	0.65

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	51.30 %
Unclassified	root	N/A	48.70 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	51.30 %
Unclassified	root	N/A	48.70 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	51.30 %
Unclassified	root	N/A	48.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.70 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	42.21 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.70 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	41.56 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.70 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	27.92 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.65 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.70 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	7.14 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	5.19 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.30 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	1.30 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.95 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	1.95 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.65 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.65 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.70 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	5.19 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	3.25 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	3.90 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	1.30 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.30 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	1.95 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.95 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	0.65 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.65 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.70 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	5.19 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	3.25 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	3.90 %
Blastococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus	1.30 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.30 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	1.95 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.95 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.65 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	0.65 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.70 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	5.19 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	3.25 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	3.90 %
unclassified Blastococcus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus	1.30 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.30 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	1.95 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.95 %
unclassified Solirubrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter	0.65 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.65 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.70 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	5.19 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	3.25 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	3.90 %
Blastococcus sp. URHD0036	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus → Blastococcus sp. URHD0036	1.30 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.30 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	1.95 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.95 %
Solirubrobacter sp. URHD0082	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	0.65 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.65 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.65 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573001\|GZR05M102JQVVI	Not Available	531	Open in IMG/M
3300001403\|JGI20205J14842_1025991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	610	Open in IMG/M
3300002245\|JGIcombinedJ26739_100752932	Not Available	853	Open in IMG/M
3300003505\|JGIcombinedJ51221_10270736	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300003505\|JGIcombinedJ51221_10296703	Not Available	657	Open in IMG/M
3300004091\|Ga0062387_100501383	Not Available	847	Open in IMG/M
3300004092\|Ga0062389_101681993	Not Available	816	Open in IMG/M
3300005434\|Ga0070709_11372435	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300005435\|Ga0070714_101959414	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300005436\|Ga0070713_100578420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1065	Open in IMG/M
3300005439\|Ga0070711_102049594	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	503	Open in IMG/M
3300005518\|Ga0070699_101734810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	572	Open in IMG/M
3300005524\|Ga0070737_10131498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1103	Open in IMG/M
3300005524\|Ga0070737_10262607	Not Available	692	Open in IMG/M
3300005537\|Ga0070730_10063903	All Organisms → cellular organisms → Bacteria	2615	Open in IMG/M
3300005548\|Ga0070665_100308317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1586	Open in IMG/M
3300005591\|Ga0070761_10037504	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2714	Open in IMG/M
3300005610\|Ga0070763_10967955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	508	Open in IMG/M
3300005614\|Ga0068856_101518422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	684	Open in IMG/M
3300005842\|Ga0068858_100161835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2107	Open in IMG/M
3300006028\|Ga0070717_10707425	Not Available	915	Open in IMG/M
3300006028\|Ga0070717_11165151	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300006059\|Ga0075017_101100631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	620	Open in IMG/M
3300006176\|Ga0070765_100517861	Not Available	1121	Open in IMG/M
3300006237\|Ga0097621_100508932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1091	Open in IMG/M
3300006804\|Ga0079221_11272120	Not Available	577	Open in IMG/M
3300006854\|Ga0075425_102118206	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300006904\|Ga0075424_102800847	Not Available	508	Open in IMG/M
3300009090\|Ga0099827_10692643	Not Available	880	Open in IMG/M
3300009098\|Ga0105245_11494116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	726	Open in IMG/M
3300009137\|Ga0066709_100620879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1543	Open in IMG/M
3300009520\|Ga0116214_1401033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	536	Open in IMG/M
3300009553\|Ga0105249_11053605	All Organisms → cellular organisms → Bacteria	883	Open in IMG/M
3300009683\|Ga0116224_10527644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus → Blastococcus sp. URHD0036	563	Open in IMG/M
3300009700\|Ga0116217_10306291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1020	Open in IMG/M
3300009700\|Ga0116217_10852587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	560	Open in IMG/M
3300010048\|Ga0126373_12203235	Not Available	612	Open in IMG/M
3300010343\|Ga0074044_10580699	Not Available	732	Open in IMG/M
3300010360\|Ga0126372_13122176	Not Available	514	Open in IMG/M
3300010362\|Ga0126377_12603322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus → Blastococcus sp. URHD0036	581	Open in IMG/M
3300010373\|Ga0134128_12259086	Not Available	599	Open in IMG/M
3300010379\|Ga0136449_102650106	Not Available	713	Open in IMG/M
3300012203\|Ga0137399_10663567	Not Available	878	Open in IMG/M
3300012206\|Ga0137380_10179729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1924	Open in IMG/M
3300012207\|Ga0137381_11583534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	546	Open in IMG/M
3300012357\|Ga0137384_10275538	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1401	Open in IMG/M
3300012925\|Ga0137419_11237503	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300014501\|Ga0182024_12730098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	527	Open in IMG/M
3300015373\|Ga0132257_102229773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	709	Open in IMG/M
3300016294\|Ga0182041_10429257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1131	Open in IMG/M
3300016341\|Ga0182035_10714905	Not Available	874	Open in IMG/M
3300016357\|Ga0182032_11490078	Not Available	587	Open in IMG/M
3300016422\|Ga0182039_11581795	Not Available	598	Open in IMG/M
3300016750\|Ga0181505_10506728	Not Available	613	Open in IMG/M
3300017821\|Ga0187812_1170128	Not Available	699	Open in IMG/M
3300017924\|Ga0187820_1015882	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1854	Open in IMG/M
3300017924\|Ga0187820_1230220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	588	Open in IMG/M
3300017932\|Ga0187814_10430119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	516	Open in IMG/M
3300017933\|Ga0187801_10024463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2079	Open in IMG/M
3300017937\|Ga0187809_10254503	Not Available	636	Open in IMG/M
3300017942\|Ga0187808_10037982	Not Available	2009	Open in IMG/M
3300017966\|Ga0187776_10756658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	693	Open in IMG/M
3300017970\|Ga0187783_10259133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1271	Open in IMG/M
3300017974\|Ga0187777_11123900	Not Available	572	Open in IMG/M
3300017974\|Ga0187777_11360219	Not Available	523	Open in IMG/M
3300017975\|Ga0187782_10459840	All Organisms → cellular organisms → Bacteria → Proteobacteria	971	Open in IMG/M
3300018001\|Ga0187815_10273056	Not Available	716	Open in IMG/M
3300018001\|Ga0187815_10290768	Not Available	692	Open in IMG/M
3300018006\|Ga0187804_10386781	Not Available	618	Open in IMG/M
3300018019\|Ga0187874_10167308	Not Available	924	Open in IMG/M
3300018043\|Ga0187887_10687985	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300018046\|Ga0187851_10197118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1198	Open in IMG/M
3300018060\|Ga0187765_10230182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1084	Open in IMG/M
3300018085\|Ga0187772_10790124	Not Available	685	Open in IMG/M
3300018088\|Ga0187771_11743436	Not Available	529	Open in IMG/M
3300019240\|Ga0181510_1097696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	542	Open in IMG/M
3300020581\|Ga0210399_10631277	Not Available	884	Open in IMG/M
3300021405\|Ga0210387_10458710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1132	Open in IMG/M
3300021407\|Ga0210383_10572621	Not Available	974	Open in IMG/M
3300021432\|Ga0210384_11642557	Not Available	548	Open in IMG/M
3300021560\|Ga0126371_10698137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1163	Open in IMG/M
3300021560\|Ga0126371_11585831	Not Available	781	Open in IMG/M
3300022557\|Ga0212123_10671531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	642	Open in IMG/M
3300024225\|Ga0224572_1039162	Not Available	895	Open in IMG/M
3300025634\|Ga0208589_1057246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	972	Open in IMG/M
3300025634\|Ga0208589_1160782	Not Available	508	Open in IMG/M
3300025906\|Ga0207699_10996954	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	619	Open in IMG/M
3300025929\|Ga0207664_10559575	Not Available	1026	Open in IMG/M
3300025929\|Ga0207664_10857578	Not Available	816	Open in IMG/M
3300026041\|Ga0207639_10351636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1316	Open in IMG/M
3300026557\|Ga0179587_10687745	Not Available	674	Open in IMG/M
3300027011\|Ga0207740_1035125	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300027070\|Ga0208365_1046446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	581	Open in IMG/M
3300027307\|Ga0209327_1024505	Not Available	820	Open in IMG/M
3300027307\|Ga0209327_1031263	Not Available	740	Open in IMG/M
3300027334\|Ga0209529_1096090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	502	Open in IMG/M
3300027725\|Ga0209178_1410952	Not Available	516	Open in IMG/M
3300027765\|Ga0209073_10042175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1467	Open in IMG/M
3300027787\|Ga0209074_10207822	Not Available	739	Open in IMG/M
3300027817\|Ga0209112_10144470	Not Available	795	Open in IMG/M
3300027842\|Ga0209580_10431774	All Organisms → cellular organisms → Bacteria → Terrabacteria group	657	Open in IMG/M
3300027889\|Ga0209380_10765517	Not Available	550	Open in IMG/M
3300027905\|Ga0209415_10772540	Not Available	674	Open in IMG/M
3300027908\|Ga0209006_11009854	Not Available	661	Open in IMG/M
3300027908\|Ga0209006_11216260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	588	Open in IMG/M
3300028773\|Ga0302234_10170566	Not Available	945	Open in IMG/M
3300028789\|Ga0302232_10107584	Not Available	1424	Open in IMG/M
3300028789\|Ga0302232_10484241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	608	Open in IMG/M
3300028906\|Ga0308309_11456906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	586	Open in IMG/M
3300029910\|Ga0311369_10417205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	1161	Open in IMG/M
3300029999\|Ga0311339_10408155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1413	Open in IMG/M
3300030007\|Ga0311338_10337455	Not Available	1646	Open in IMG/M
3300030007\|Ga0311338_10406429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1459	Open in IMG/M
3300030057\|Ga0302176_10344649	Not Available	600	Open in IMG/M
3300030618\|Ga0311354_10350787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1506	Open in IMG/M
3300030618\|Ga0311354_10667420	Not Available	999	Open in IMG/M
3300030618\|Ga0311354_11633557	Not Available	565	Open in IMG/M
3300031233\|Ga0302307_10515364	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300031234\|Ga0302325_11509901	Not Available	864	Open in IMG/M
3300031236\|Ga0302324_101902992	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300031545\|Ga0318541_10846796	Not Available	510	Open in IMG/M
3300031573\|Ga0310915_10049231	Not Available	2715	Open in IMG/M
3300031573\|Ga0310915_11231455	Not Available	517	Open in IMG/M
3300031640\|Ga0318555_10088861	Not Available	1617	Open in IMG/M
3300031668\|Ga0318542_10271343	Not Available	865	Open in IMG/M
3300031682\|Ga0318560_10800797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	509	Open in IMG/M
3300031708\|Ga0310686_113469210	Not Available	782	Open in IMG/M
3300031715\|Ga0307476_11182552	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	560	Open in IMG/M
3300031748\|Ga0318492_10211338	Not Available	995	Open in IMG/M
3300031768\|Ga0318509_10565248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	634	Open in IMG/M
3300031770\|Ga0318521_10792510	Not Available	577	Open in IMG/M
3300031770\|Ga0318521_11030088	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300031778\|Ga0318498_10297442	Not Available	724	Open in IMG/M
3300031778\|Ga0318498_10500645	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	535	Open in IMG/M
3300031781\|Ga0318547_11014251	Not Available	519	Open in IMG/M
3300031782\|Ga0318552_10091675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1491	Open in IMG/M
3300031788\|Ga0302319_10214672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	2403	Open in IMG/M
3300031798\|Ga0318523_10105404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1386	Open in IMG/M
3300031805\|Ga0318497_10827316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	519	Open in IMG/M
3300031819\|Ga0318568_10620176	Not Available	673	Open in IMG/M
3300031897\|Ga0318520_10624690	Not Available	671	Open in IMG/M
3300031938\|Ga0308175_100824720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1016	Open in IMG/M
3300031954\|Ga0306926_12774760	Not Available	530	Open in IMG/M
3300032065\|Ga0318513_10153246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1100	Open in IMG/M
3300032074\|Ga0308173_11985753	Not Available	549	Open in IMG/M
3300032180\|Ga0307471_103117921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	588	Open in IMG/M
3300032261\|Ga0306920_100046306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6304	Open in IMG/M
3300032261\|Ga0306920_102159957	Not Available	775	Open in IMG/M
3300032893\|Ga0335069_10046043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5771	Open in IMG/M
3300032896\|Ga0335075_10822575	Not Available	866	Open in IMG/M
3300032898\|Ga0335072_11690223	Not Available	529	Open in IMG/M
3300033829\|Ga0334854_031913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1266	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.86%
Host-Associated	Host-Associated	7.14%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.87%
Aquatic	Environmental → Aquatic	12.99%
Plants	Host-Associated → Plants	7.14%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	69.48%
Freshwater	Environmental → Aquatic → Freshwater	11.69%
Peat	Environmental → Terrestrial → Peat	10.39%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.90%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.60%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.65%
Sediment	Environmental → Aquatic → Sediment	0.65%
Roots	Host-Associated → Plants → Roots	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.51%
Loam	Environmental → Terrestrial → Soil → Loam	17.53%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	11.69%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	10.39%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.44%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.25%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.95%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.65%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.65%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.65%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	20.78%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.23%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.04%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	10.39%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.79%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	6.49%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.49%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.25%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.60%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.95%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.30%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.65%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.65%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.65%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.94%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	9.09%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.14%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	6.49%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.19%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.55%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.55%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.90%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.25%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.25%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.60%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.60%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.95%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.95%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.95%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.30%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.30%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.30%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.30%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.30%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.65%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.65%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.65%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.65%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.65%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.65%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.65%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.65%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.65%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573001	Grass soil microbial communities from Rothamsted Park, UK - FD2 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
3300001403	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-2 shallow-092012	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005524	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen10_05102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300019240	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300024225	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5	Host-Associated	Open in IMG/M
3300025634	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027011	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 29 (SPAdes)	Environmental	Open in IMG/M
3300027070	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes)	Environmental	Open in IMG/M
3300027307	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027334	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O2 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027817	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028773	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2	Environmental	Open in IMG/M
3300028789	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030057	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033829	Peat soil microbial communities from Stordalen Mire, Sweden - 715 P2 1-5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FD2_08715610	2189573001	Grass Soil	VDSSHLHRRPHKIRRTGRHATPSQVEKVAEKAGKAAPAVAIAGALVALPQSAHAE
JGI20205J14842_10259911	3300001403	Arctic Peat Soil	MNSADTHARPRKIRRTGRHTTPSQVQKVAEKAGKAAPAMAIAGVLV
JGIcombinedJ26739_1007529322	3300002245	Forest Soil	VDSVQLHRRPKKFRRTGRHTTPSQVEKVTEKATKAAPAVAIAGAL
JGIcombinedJ51221_102707361	3300003505	Forest Soil	VDSVQSHRRPRKLRRTGRHTQPSQVEKVAEVATKAAPAVAIAGALV
JGIcombinedJ51221_102967031	3300003505	Forest Soil	VNSSHRHRRPRKIRRTGRHARPSQVQNVAETAYKAAPAMAIAGVLIAAPQAHA
Ga0062387_1005013832	3300004091	Bog Forest Soil	VDSSPSHRRPRKIRRTGRHTQPSQVEKVAEVATKAAPAVAIAGVLVATAPQ
Ga0062389_1016819932	3300004092	Bog Forest Soil	VDTAHLHRRPRKIRRSGRHTTPSQAAVVAGKATKAAPAVAIAGSLVAM
Ga0070709_113724352	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VEAAHLHRRPHKIRRTGRHTTPSQVEKVAETAVKVAPAVAITGA
Ga0070714_1019594141	3300005435	Agricultural Soil	LGSSVDSALHRRPHKIRRTGRHTTPSQVEKVAETAVKVAPAVAITGAL
Ga0070713_1005784201	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VDSSHLHRRPRKIRRTGRHATPSQVEKVAEKAGKAAPAVAIAGALVALPQSAHAEVKTP
Ga0070711_1020495942	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	LGSSVDSALHRRPHKIRRTGRHTTPSQVEKVAETAVKVAPAVA
Ga0070699_1017348102	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VHRRPRKIRRTGRHTTPSQVEKVAEKAGKAAPAVAIAGVLVAAAP
Ga0070737_101314983	3300005524	Surface Soil	VESAHSHRRPRKIRRTGRHTTPSQAEKVAEKAGKAAPAMAIAGA
Ga0070737_102626072	3300005524	Surface Soil	METTLKSFVGSESKHARKMKVRRTGRHTTPSQVEKATEMAGKAAPA
Ga0070730_100639031	3300005537	Surface Soil	VSSSHKHRRPRKVLRTGRHARPSQIQNVTETAYKAAP
Ga0070665_1003083174	3300005548	Switchgrass Rhizosphere	VDSSHLHRRPHKIRRTGRHATPSQVEKVAGTAAKAAPAVAIAGALVAL
Ga0070761_100375045	3300005591	Soil	VEKPALHRRPRKIRRTGRHTTPSQVDKVAEMAGKAAPAMAIAGVLV
Ga0070763_109679551	3300005610	Soil	VDSVQSHRRPRKIRRTGRHTQPSQVEKVAEVATKAAPAVAIA
Ga0068856_1015184221	3300005614	Corn Rhizosphere	VNSSPRHRRPQHYRRSGRHAAPSQVQNVAEKAGKAVPAMAVAGVLVAAPHAT
Ga0068858_1001618351	3300005842	Switchgrass Rhizosphere	VDSSNLHRRPHKIRRTGRHATPSQVEKVAGTAVKAAPAVAIAGALVALPQSAH
Ga0070717_107074251	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VNSSHSHRRPRNPRKVRRTGRHTKPSQVQNVAGTACKAAPAVAIAGTLFAAP
Ga0070717_111651511	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VDSTHLHRRPRKIRRTGRHATPSQVEKVAEKAGKAAPAVAIAGALVALPQSAHAEVKTPA
Ga0075017_1011006312	3300006059	Watersheds	VDSAHEHRRPRKIRRTGRHTAPSQVEKVAEKAGKAAPAMAIAGVLVAAA
Ga0070765_1005178612	3300006176	Soil	VNSSHRHRRPRKVRRTGRHTRPSQVQNVAETAYKAAPAMAIAG
Ga0097621_1005089322	3300006237	Miscanthus Rhizosphere	VNSSPRHRRPQHYRRSGRHAAPSQVQNVAEKASKAVPAMAVAGVLVAA
Ga0079221_112721201	3300006804	Agricultural Soil	VRRAGNKRGSAVNSSHSHRRPRNPRKVRRTGRHTKPSQVQNVAGKACKAAPAVAIAGTLFAAP
Ga0075425_1021182061	3300006854	Populus Rhizosphere	LGSSVDSALHRRPHKIRRTGRHTTPSQVEKVAETAVKVAPAVAITGALVALPTAANASVRTP
Ga0075424_1028008471	3300006904	Populus Rhizosphere	VSSSHSHRRPQNPRKIRRTGRHTKPSQVQNVAGTACKAAPAVAIAG
Ga0099827_106926431	3300009090	Vadose Zone Soil	VDSTHLHRRPRKIRRTGRHTTPSQVEKVTEKAVKAAPAVAITGALVAMPAAANAS
Ga0105245_114941161	3300009098	Miscanthus Rhizosphere	VNSSPRHRRPQHYRRSGRHAAPSQVQNVAEKASKAVPAMAVAGVLVAAP
Ga0066709_1006208791	3300009137	Grasslands Soil	VDSTHLHRRPRKIRRTGRHATPSQVEKVAEKAGKAAPAVAIAGALVALPQSAH
Ga0116214_14010332	3300009520	Peatlands Soil	VDSAHSHRRQKKIRRTGRHTQPSQVEKVAEVATKAAPAVAIAGALVATAP
Ga0105249_110536053	3300009553	Switchgrass Rhizosphere	VDSSNLHRRPHKIRRTGRHATPSQVEKVAGTAVKAAPAVAIAGALVALPQSAHAEVKTPA
Ga0116224_105276442	3300009683	Peatlands Soil	VDSAHVHRRPRKIRRTGRHTAPSQVEKVAEKAGKAA
Ga0116217_103062911	3300009700	Peatlands Soil	VDSAHSHRRQKKIRRTGRHTQPSQVEKVAEVATKAAPAVAIAGALVATA
Ga0116217_108525871	3300009700	Peatlands Soil	VDSAHVHRRPRKIRRTGRHTAPSQVEKVAEKAGKAAPAMAIAG
Ga0126373_122032351	3300010048	Tropical Forest Soil	VDSASLHRRPRKIRRTGRHTTPSQVEKVAEKAGKAAPAVAIAGALVALP
Ga0074044_105806992	3300010343	Bog Forest Soil	VESVNVVRRARKIRRTGRHATPSQVEKVAEKAGKAAPAMAIAGVLVAAPQ
Ga0126372_131221761	3300010360	Tropical Forest Soil	VEAAHLHRRPHKIRRTGRHTTPSQVEKVAETAVKVAPAVAITGNVWPG
Ga0126377_126033221	3300010362	Tropical Forest Soil	VDSSHLHRRPRKLRRTGRHATPSQVEKVAEKAGKAAPAVAIA
Ga0134128_122590861	3300010373	Terrestrial Soil	VEAAHLHRRPHKIRRTGRHTTPSQVEKVAETAVKVAPAVAITGALVALPTAANASVR
Ga0136449_1026501062	3300010379	Peatlands Soil	VDSAHSHRRQKKIRRTGRHTQPSQVEKVAEVATKAAPAVAIAGALVATAPQAQ
Ga0137399_106635672	3300012203	Vadose Zone Soil	VDSTHLHRRPRKIRRTGRHATPSQVEKVAEKAGKAAPAVAIAGALVA
Ga0137380_101797294	3300012206	Vadose Zone Soil	VDSSHLHRRPHKIRRTGRHATPSQVEKVAGTAAKAAPAVAIAGALVALPQS
Ga0137381_115835342	3300012207	Vadose Zone Soil	VDSSHLHRRPHKIRRTGRHATPSQVEKVAEKAGKAAPAVAIAGALVALPQSAHAEVK
Ga0137384_102755384	3300012357	Vadose Zone Soil	VDSTHLHRRPRKIRRTGRHATPSQVEKAAEKAGKAAPAVAIAGALVALPQSAHAEVKT
Ga0137419_112375031	3300012925	Vadose Zone Soil	VDSSHLHRRPHKLRRTGRHTTPSQVEKVAGTAVKAAPAVAIAGALVALPQSAHASVRT
Ga0182024_127300982	3300014501	Permafrost	MHRRPTKIRRTGRHTTPSQVEKVAATATKAAPAVAI
Ga0132257_1022297731	3300015373	Arabidopsis Rhizosphere	VDSSHLHRRPRKLRRTGRHATPSQVEKVAEKAGKAAPAVAIAGALVA
Ga0182041_104292571	3300016294	Soil	VDPASKHRRPRKIRRTGRHTTPSQVEKVAEKAGKAAPAMAIAGVLVAVPQAHAAVKSPAK
Ga0182035_107149051	3300016341	Soil	VDSASKHRRPRKIRRTGRHTTPSQVEKVAEKAGKAAPAMAIAGVLVAVP
Ga0182032_114900781	3300016357	Soil	VDSVHRHRRPRKIRHTGRHTAPSHVEKVVEKAGKAAPAMAIAG
Ga0182039_115817951	3300016422	Soil	MESVHTHRRPRKIRRTGRHTTPSHVEKVAEKAGKAAPAMAIAGALVAAA
Ga0181505_105067283	3300016750	Peatland	MGSFVGSAHRHGRKMKLMRSGRHTTPSQVEKVAEKAGKAAPAMAVTAGALMAVP
Ga0187812_11701282	3300017821	Freshwater Sediment	VDSVHSHRRPRKIRRTGRHTQPSQVEKVAEVATKAAPAVAIA
Ga0187820_10158821	3300017924	Freshwater Sediment	MNSSHRHRRPRKIRRTGRHTRPSQVQNVAETAGKAAPAMAMAGVLIAAPQAHAAVK
Ga0187820_12302202	3300017924	Freshwater Sediment	MDSPSKHRRPRKIRRTGRHTTPSQVEKVAEVAGKAAPAMAIAGVLVTSSPAH
Ga0187814_104301191	3300017932	Freshwater Sediment	VDSAHSHRRPRKIRRTGRHTQPSQVEKVAGVATKAAPAVAIAGALVATAPQ
Ga0187801_100244634	3300017933	Freshwater Sediment	MDSPSKHRRPRKIRRTGRHTTPSQVEKVAEAAGKAAPAMAIAGVLVASS
Ga0187809_102545032	3300017937	Freshwater Sediment	VESAHTHRRPRKIRRTGRHTTPSHVEKVAEKAGKAAPAVAIAGALVA
Ga0187808_100379823	3300017942	Freshwater Sediment	VNSAPKHRRPAKVRRTGRHAAPNQLEKAAEKAGKAAPAAAIAGILVAGPA
Ga0187776_107566581	3300017966	Tropical Peatland	VESAHTHRRPRKIRRTGRHTTPSQVEKAAEKAGKAAPVVAIAGVL
Ga0187783_102591333	3300017970	Tropical Peatland	VDSSHSHRRPKKVRRTGRHTQPSQVEKVAEVATKAAPAVAIAGALVATAPQ
Ga0187777_111239001	3300017974	Tropical Peatland	MHTHRRSRKIRRTGRHTTPSQVEKVAEKAGRAAPAMAIAGALVA
Ga0187777_113602192	3300017974	Tropical Peatland	VDSAHTHRRPRKIRRTGRHTTPSQVEKVAEKAGKAAPAMA
Ga0187782_104598402	3300017975	Tropical Peatland	MDSRSKHRRPHKFRRTGRHTTPSQVEKVAGAAGKAAPAMAIAGVL
Ga0187815_102730562	3300018001	Freshwater Sediment	VDSVHSHRRPRKIRRTGRHTQPSQVEKVAEVATKAAPAVAIAGALVATAPQ
Ga0187815_102907682	3300018001	Freshwater Sediment	VDSAHSHRRQKKIRRTGRHTQPSQVEKVAEVATKAAPAVAIAG
Ga0187804_103867811	3300018006	Freshwater Sediment	MDSPSKHRRPRKIRRTGRHTTPSQVEKVAEVAGKAAPAVAIAGVLVASSPAH
Ga0187874_101673082	3300018019	Peatland	MGSFVGSAHRHGRKMKLVRSGRHTTPSQVEKVAEKAGKAAPAMAVTAGAMMAV
Ga0187875_105147002	3300018035	Peatland	VNSAQTHHRPRKIRRTGRHTAPSQVQKVGAKAAPVCGAMGAVAVAGVLAAAP
Ga0187887_106879851	3300018043	Peatland	MHLHRRPHKIRRTGRHTTPSQVEKVAETAVKVAPAVAITG
Ga0187851_101971184	3300018046	Peatland	VDATNLDRRGRKIRRTGRHTTPSPVEKVAEKAGKAAPAVAIA
Ga0187765_102301823	3300018060	Tropical Peatland	VDSSHLHRRPRKIRRTGRHATPSQVEKVAERAGKAAPAVAIAGALVALPQSAHAEVK
Ga0187772_107901241	3300018085	Tropical Peatland	VDSAHSHRRPRKIRRTGRHTQPSQAEKVAEVATKAAPAVAIAGALVATAPQ
Ga0187771_117434361	3300018088	Tropical Peatland	VETSHRHRRPRKVRRTGRHAKPSQVHNVAETAGKAAPALAIA
Ga0181510_10976961	3300019240	Peatland	MHRRPRKIRRTGRHTTPSQVEKVAEMAGKAAPAVAIA
Ga0210399_106312771	3300020581	Soil	VDSANSHRRPRKIRRTGRHTQPSQVEKVAEVATKAAPAVAIAGALVATAPQA
Ga0210387_104587101	3300021405	Soil	VDSTHLHRRPRKIRRTGRHATPSQVEKVAEKAGKAAPAVAIAGALVALPQSAHAEV
Ga0210383_105726212	3300021407	Soil	VNSSSRHRRPHKIRRNGRHAAPSQIQNVADKATKATPAMALAG
Ga0210384_116425571	3300021432	Soil	VDSVHSHRRPRKIRRTGRHIEPSQVAKVAEVATKAAPAVAIAGALVATA
Ga0126371_106981373	3300021560	Tropical Forest Soil	VDSSHLHRRPRKLRRTGRHATPSQVEKVAEKAGKAAPAVAIAGALVALPQSAHAEV
Ga0126371_115858311	3300021560	Tropical Forest Soil	VEAAHLHRRPHKIRRTGRHTTPSQVEKVAETAVKVAPAVAITGALVALPT
Ga0212123_106715312	3300022557	Iron-Sulfur Acid Spring	VDSAHTHRRPRKIRRTGRHTTPSQVEKVAGAAGKAAPAVAIAGALVA
Ga0224572_10391621	3300024225	Rhizosphere	MGSSVSTTNTHRRPRKIRRTGRHTTPSQVEKVAEKATKAAPAMA
Ga0208589_10572461	3300025634	Arctic Peat Soil	VESLDVDRRTRKIRRTGRHTTPSQVEKVAEKAGKAAPMVAIAG
Ga0208589_11607822	3300025634	Arctic Peat Soil	VDSLYADRPARKIRRTGRHTAPSQVEKVAEKAGKAAPMVAIAGVLVAAP
Ga0207699_109969541	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	VNSSPRHRRPQHYRRSGRHAAPSQVQNVAEKASKAVPAMAVAGVLV
Ga0207664_105595752	3300025929	Agricultural Soil	VDSTHLHRRPRKIRRTGRHATPSQVEKVAEKAGKAAPAVAIAGALVALPQS
Ga0207664_108575782	3300025929	Agricultural Soil	VNSSHSHRRPRNPRKVRRTGRHTKPSPVQNVAGTACKAAPAVAIAGTLFAAPAAHA
Ga0207639_103516361	3300026041	Corn Rhizosphere	VNSSPRHRRPQHYRRSGRHAAPSQVQNVAEKASKAVPAMAVAGVLVAAPHAT
Ga0179587_106877452	3300026557	Vadose Zone Soil	VGSAHRHGRKMKLRRSGRHATPSQVEKVAEKAGKAAPVMAI
Ga0207740_10351251	3300027011	Tropical Forest Soil	LGSSVDPASKHRRPKKIRRTGRHTTPSQVEKVAEKAGKAAPAMAIAGVLVA
Ga0208365_10464461	3300027070	Forest Soil	VDSVHSHRRPRKVRRTGRHTEPSQVAKVADVATKAAPAVA
Ga0209327_10148272	3300027307	Forest Soil	METFVGSAHRHGRKVKIMRSGRHTQPSQVEKVAEKAGKAAPVMAISAGALVAVPHGHAVT
Ga0209327_10245051	3300027307	Forest Soil	MENFVGAAHRHSRKVKIMRSGRHTQPSQVEKVAEKAGKAAPVMAISAGALVA
Ga0209327_10312632	3300027307	Forest Soil	MENFVGAAHRHSRKVKILRSGRHTQPSQVEKVAATAGKAAPVMAISAGALVAVPHGH
Ga0209529_10960901	3300027334	Forest Soil	VDAANVDRRGRKIRRTGRHTTPSPVEKVAEKAGKAAPVMAIS
Ga0209178_14109522	3300027725	Agricultural Soil	VEAAHLHRRPHKIRRTGRHTTPSQVEKVAETAVKVAPAVAITGALVALPTAANA
Ga0209073_100421753	3300027765	Agricultural Soil	VEAAHLHRRPHKIRRTGRHTTPSQVEKVAETAVKVAPAVAITGALVALP
Ga0209074_102078222	3300027787	Agricultural Soil	VEAAHLHRRPHKIRRTGRHTTPSQVEKVAETAVKVAPAVAITGALVA
Ga0209112_101444702	3300027817	Forest Soil	VDSAQDHRPRKIRRTGRHSAPSQVEKVAERAGKAAPAVAIAGVLVAMPQAHAA
Ga0209580_104317741	3300027842	Surface Soil	VNSSHRHRRPRKIRRTGRHTRPSQVQNVAETACKAAPAMAIAGALIAAPPA
Ga0209380_107655171	3300027889	Soil	MERVGSAVNPAPRHRRPRKIMRTGRHTTPSQVQKVADK
Ga0209415_107725401	3300027905	Peatlands Soil	VDSVHSHRRPRKIRRSGKHTQPSQVEKVAEVATKA
Ga0209006_110098542	3300027908	Forest Soil	VNSSHRHRRPRKVRRTGRHARPSQVQNVAETACKAAPAMAIAGALIAAPQVHAVA
Ga0209006_112162601	3300027908	Forest Soil	VDAANVDRRGRKIRRTGRHTTPSPVEKVAEKAGKAAPAVAIAGVLVGSVGTASAAH
Ga0302234_101705661	3300028773	Palsa	VNSAQTHYRPRKIRRTGRHTTPSQVHKAAEKAAKAAPVFGSMAMAGVLAAAPQAH
Ga0302232_101075843	3300028789	Palsa	VDATNVDRRGRKIRRTGRHTTPSPVEKVAEKAGKAAPAVAIAGVLVAA
Ga0302232_104842411	3300028789	Palsa	VSEHGHNFGSPVDSLHTDRPARKIRRTGRHTAPSQVEKVAEKAGKAAPMVAIAGVLVAAPQAHASVKASAN
Ga0308309_114569061	3300028906	Soil	VDAANVDRRGRKIRRTGRHTTPSPVEKVAEKAGKAAPAVAIAGVLVGSVG
Ga0311369_104172051	3300029910	Palsa	VNPAHTQRQPRKIRRTGRHTTPSQVQKVAEKAGKAAPAMAIAGVLVAAPHAH
Ga0311339_104081553	3300029999	Palsa	VSEHGHNFGSPVDSLHTDRPARKIRRTGRHTAPSQVEKVAEKAGKAAPMVAIAGVLVAAPQAHASVKAS
Ga0311338_103374552	3300030007	Palsa	VDATNADRRSRKIRRTGRHTTPSPVEKVAEKAGKAAPAVAIAGVLVAA
Ga0311338_104064291	3300030007	Palsa	VDAANVDRRGRKIRRTGRHTTPSPVEKVAEKAGKAAP
Ga0302176_103446492	3300030057	Palsa	VDAANVDRRGRKIRRTGRHTTPSPVEKVAEKAGKAAPAVAIA
Ga0311354_103507873	3300030618	Palsa	VDATNVDRRGRKIRRTGRHTTPSPVEKVAEKAGKAAPAVAIAGVLVAAAPQAS
Ga0311354_106674203	3300030618	Palsa	VDATNVDRRGRKIRRTGRHTTPSPVEKVAEKAGKAAPAVAIAGVLVAAAPQANA
Ga0311354_116335571	3300030618	Palsa	VDATNVDRRSRKIRRTGRHTTPSPVEKVAEKAGKAAPAVAIAGVLVAAAPQA
Ga0302307_105153642	3300031233	Palsa	VDATNVDRRGRKIRRTGRHTTPSPVEKVAEKAGKAAPAVAIAGVLV
Ga0302325_115099012	3300031234	Palsa	VDATNVDRRSRKIRRTGRHTTPSPVEKVAEKAGKAAPAVAIAGVLVAA
Ga0302324_1019029921	3300031236	Palsa	VDAANVDRRGRKIRRTGRHTTPSPVEKVAEKAGKAA
Ga0318541_108467961	3300031545	Soil	VNSSHKHRRPRKIRRAGRHTRPSQVQNVAEKAGKAAPAIAIAG
Ga0310915_100492316	3300031573	Soil	MESVHTHRRPRKIRRTGRHTTPSHVEKVAEKAGKAAPA
Ga0310915_112314551	3300031573	Soil	VDSVHRHRRPRKIRHTGRHTAPSHVEKVVEKAGKAAPAMAIAGALVAAAPQAHGAVRTP
Ga0318555_100888614	3300031640	Soil	MESVHTHRRPRKIRRTGRHTTPSHVEKVAEKAGKAAPAM
Ga0318542_102713431	3300031668	Soil	MHTHRRSRKIRRTGRHTTPSQVEIVAEKAGRAAPAVAI
Ga0318560_108007971	3300031682	Soil	VDSASKHRRPRKIRRTGRHTTPSQVEKVAEKAGKAAPAMAIAGVLVAIPQA
Ga0310686_1134692101	3300031708	Soil	VDSVQSHRRPRKIRRTGRHTQPSQVEKVAEVATKAAPAVAI
Ga0307476_111825521	3300031715	Hardwood Forest Soil	VESAHLHRRPRKIRRTGRHTAPSQVEKVAEVAGKAAPAMAIAGVLVAA
Ga0318492_102113381	3300031748	Soil	MHTHRRSRKIRRTGRHTTPSQVEKVAEKAGRAAPAVAIAG
Ga0318509_105652482	3300031768	Soil	MSAGRSGRRPVRLRRRGRHTPPSQVEKVAEKAGKAAPAVAIAGALVAAQAQ
Ga0318521_107925101	3300031770	Soil	MHTHRRSRKVRRTGRHTTPSQVEKVAEKAGRAAPAMAIAGALVATAPQAHA
Ga0318521_110300882	3300031770	Soil	VDSSHLHRRPRKLRRTGRHATPSQVEKVAEKAGKAAPAV
Ga0318498_102974421	3300031778	Soil	MHTHRRSRKIRRTGRHTTPSQVEKVAEKAGRAAPAVA
Ga0318498_105006451	3300031778	Soil	VDSAYEHGHRRPRKIRRTGRHTAPSQVEKVAEKAGKAAPAVAIAGVLVAA
Ga0318547_110142511	3300031781	Soil	MDSVHTHRRPRKIRRTGRHTTPSHVEKVAEKTGKAAPAMAIAGALVAVAPQAHA
Ga0318552_100916754	3300031782	Soil	VDSASKHRRPRKIRRTGRHTTPSQVEKVAEKAGKAAPAMAIAGVLV
Ga0302319_102146721	3300031788	Bog	MGSFVGSAHRHGRKMKLVRSGRHTTPSQVEKVAEKAGKAAPAMAVTAGALM
Ga0318523_101054041	3300031798	Soil	VDSASKHRRPRKIRRTGRHTTPSQVEKVAEKAGKAAPAMAI
Ga0318497_108273161	3300031805	Soil	VDSAYGHGHRRPRKIRRTGRHTAPSQVEKVAEKAGKAAPAVAIAGVLVAAAPQ
Ga0318568_106201761	3300031819	Soil	MHTHRRSRKIRRTGRHTTPSQVEIVAEKAGRAAPAVAIAGALVATAPQ
Ga0318520_106246902	3300031897	Soil	VDSVHRHRRPRKIRHTGRHTAPSHVEKVVEKAGKAAPAMAIAGALVAAAPQAHG
Ga0308175_1008247203	3300031938	Soil	VEAAHLHRRPRKIRRTGRHTTPSQVEKVAETAVKVAPAVAITGALVALPTAAN
Ga0306926_127747601	3300031954	Soil	VNSSHKHRRPRKIRRAGRHTRPSQVQNVAEKAGKAAPAI
Ga0318513_101532463	3300032065	Soil	VDPASKHRRPRKIRRTGRHTTPSQVEKVAVKAGKAAPAMAIAGVL
Ga0308173_119857531	3300032074	Soil	VNSSHSHRRPPKVRRAGRHAKPSPTQNVVGTAYKAAPAMAIAGALIAAP
Ga0307471_1031179212	3300032180	Hardwood Forest Soil	VDSVQSHRRPRKIRRTGRHTQPSQVEKVADVATKAAPA
Ga0306920_1000463065	3300032261	Soil	MHTHRRSRKVRRTGRHTTPSQVEKVAEKAGRAAPAMAIAGAL
Ga0306920_1021599571	3300032261	Soil	VNSSHKHRRPRKIRRAGRHTRPSQVQNVAEKAGKAAPAIAIAGALIAS
Ga0335069_100460431	3300032893	Soil	VDSSHLHRRPRKLRRTGRHATPSQAEKVAEKAGKAAPAVAIAGALVA
Ga0335075_108225752	3300032896	Soil	VDSAHTHRRARKIRRTGRHTTPSQVEKVAEKAGKAAPAMAIAGAIVAGPQAAH
Ga0335072_116902231	3300032898	Soil	MHRRSRKIRRTGRHTTPSSVEKVAEKAGKAAPAVAIAGVLVAAPVANAA
Ga0334854_031913_3_155	3300033829	Soil	MDATNVDRRGRKIRRTGRHTTPSPVEKVAEKAGKAAPAVAIAGVLVAAAPQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F044605

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences