NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F044594

Metagenome / Metatranscriptome Family F044594

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F044594
Family Type Metagenome / Metatranscriptome
Number of Sequences 154
Average Sequence Length 73 residues
Representative Sequence MSILAHTSDFADRRALRAVRQPGLVRRFLQWRQRQAEQAIAIHLGLTGGHITDEIERRMTERLTSGGGFRG
Number of Associated Samples 122
Number of Associated Scaffolds 154

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 78.57 %
% of genes near scaffold ends (potentially truncated) 30.52 %
% of genes from short scaffolds (< 2000 bps) 88.96 %
Associated GOLD sequencing projects 111
AlphaFold2 3D model prediction Yes
3D model pTM-score0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (93.506 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(13.636 % of family members)
Environment Ontology (ENVO) Unclassified
(46.753 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(57.792 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 52.53%    β-sheet: 0.00%    Coil/Unstructured: 47.47%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.31
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 154 Family Scaffolds
PF00126HTH_1 24.03
PF03466LysR_substrate 21.43
PF07690MFS_1 18.83
PF03401TctC 4.55
PF16694Cytochrome_P460 3.25
PF04392ABC_sub_bind 0.65
PF13437HlyD_3 0.65
PF01678DAP_epimerase 0.65
PF13343SBP_bac_6 0.65
PF13278Obsolete Pfam Family 0.65

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 154 Family Scaffolds
COG3181Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctCEnergy production and conversion [C] 4.55
COG0253Diaminopimelate epimeraseAmino acid transport and metabolism [E] 0.65
COG2984ABC-type uncharacterized transport system, periplasmic componentGeneral function prediction only [R] 0.65

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms93.51 %
UnclassifiedrootN/A6.49 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459020|G1P06HT02GSISHAll Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales519Open in IMG/M
3300000956|JGI10216J12902_103808808All Organisms → cellular organisms → Bacteria → Proteobacteria2402Open in IMG/M
3300000956|JGI10216J12902_108038897All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria610Open in IMG/M
3300000956|JGI10216J12902_114121232All Organisms → cellular organisms → Bacteria → Proteobacteria1204Open in IMG/M
3300000956|JGI10216J12902_118558287Not Available511Open in IMG/M
3300002568|C688J35102_118983589All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales622Open in IMG/M
3300003215|JGI25153J46596_10002660All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria10206Open in IMG/M
3300004114|Ga0062593_100072084All Organisms → cellular organisms → Bacteria → Proteobacteria2291Open in IMG/M
3300004114|Ga0062593_101543566All Organisms → cellular organisms → Bacteria → Proteobacteria718Open in IMG/M
3300004153|Ga0063455_101360473All Organisms → cellular organisms → Bacteria → Proteobacteria545Open in IMG/M
3300004156|Ga0062589_100481333All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1039Open in IMG/M
3300004156|Ga0062589_100700258All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales899Open in IMG/M
3300004156|Ga0062589_101033731All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales771Open in IMG/M
3300004157|Ga0062590_100285352All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1272Open in IMG/M
3300004157|Ga0062590_100990055All Organisms → cellular organisms → Bacteria798Open in IMG/M
3300004480|Ga0062592_101311024All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas → Stenotrophomonas maltophilia group → Stenotrophomonas maltophilia684Open in IMG/M
3300004643|Ga0062591_100840315All Organisms → cellular organisms → Bacteria → Proteobacteria853Open in IMG/M
3300004643|Ga0062591_101148246All Organisms → cellular organisms → Bacteria → Proteobacteria752Open in IMG/M
3300005093|Ga0062594_101447367All Organisms → cellular organisms → Bacteria → Proteobacteria701Open in IMG/M
3300005332|Ga0066388_103406980All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales812Open in IMG/M
3300005334|Ga0068869_101803172All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales547Open in IMG/M
3300005337|Ga0070682_100727798All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales798Open in IMG/M
3300005343|Ga0070687_100199313All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1212Open in IMG/M
3300005347|Ga0070668_101160481All Organisms → cellular organisms → Bacteria699Open in IMG/M
3300005353|Ga0070669_101815076All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales532Open in IMG/M
3300005354|Ga0070675_100696453All Organisms → cellular organisms → Bacteria → Proteobacteria925Open in IMG/M
3300005356|Ga0070674_101584330All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales590Open in IMG/M
3300005356|Ga0070674_102214273Not Available502Open in IMG/M
3300005364|Ga0070673_101304831All Organisms → cellular organisms → Bacteria → Proteobacteria682Open in IMG/M
3300005365|Ga0070688_100904610All Organisms → cellular organisms → Bacteria → Proteobacteria696Open in IMG/M
3300005367|Ga0070667_101265160All Organisms → cellular organisms → Bacteria → Proteobacteria691Open in IMG/M
3300005441|Ga0070700_100813183All Organisms → cellular organisms → Bacteria → Proteobacteria754Open in IMG/M
3300005441|Ga0070700_101839094Not Available522Open in IMG/M
3300005455|Ga0070663_100615624All Organisms → cellular organisms → Bacteria → Proteobacteria915Open in IMG/M
3300005456|Ga0070678_100736586All Organisms → cellular organisms → Bacteria891Open in IMG/M
3300005511|Ga0077121_10344695All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1072Open in IMG/M
3300005515|Ga0077122_10638477All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales655Open in IMG/M
3300005543|Ga0070672_100814435All Organisms → cellular organisms → Bacteria → Proteobacteria822Open in IMG/M
3300005548|Ga0070665_101589718All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas → Stenotrophomonas maltophilia group → Stenotrophomonas maltophilia662Open in IMG/M
3300005718|Ga0068866_10527196All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria786Open in IMG/M
3300005718|Ga0068866_11431801All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas → Stenotrophomonas maltophilia group → Stenotrophomonas maltophilia506Open in IMG/M
3300005719|Ga0068861_102272729All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales544Open in IMG/M
3300005764|Ga0066903_103503914All Organisms → cellular organisms → Bacteria → Proteobacteria846Open in IMG/M
3300005764|Ga0066903_104054224All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria785Open in IMG/M
3300005842|Ga0068858_100992317All Organisms → cellular organisms → Bacteria → Proteobacteria823Open in IMG/M
3300005983|Ga0081540_1016601All Organisms → cellular organisms → Bacteria → Proteobacteria4597Open in IMG/M
3300005985|Ga0081539_10026130All Organisms → cellular organisms → Bacteria → Proteobacteria3737Open in IMG/M
3300005985|Ga0081539_10380097All Organisms → cellular organisms → Bacteria → Proteobacteria589Open in IMG/M
3300006178|Ga0075367_10507615All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria765Open in IMG/M
3300006195|Ga0075366_10018660All Organisms → cellular organisms → Bacteria → Proteobacteria4007Open in IMG/M
3300006578|Ga0074059_11947307Not Available528Open in IMG/M
3300006581|Ga0074048_12838382All Organisms → cellular organisms → Bacteria → Proteobacteria832Open in IMG/M
3300006844|Ga0075428_100076452All Organisms → cellular organisms → Bacteria → Proteobacteria3655Open in IMG/M
3300006903|Ga0075426_11288616All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae554Open in IMG/M
3300006904|Ga0075424_100110037All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2909Open in IMG/M
3300006953|Ga0074063_10022098All Organisms → cellular organisms → Bacteria → Proteobacteria2206Open in IMG/M
3300006953|Ga0074063_13542335All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales712Open in IMG/M
3300006954|Ga0079219_11365313Not Available630Open in IMG/M
3300009094|Ga0111539_12980071Not Available547Open in IMG/M
3300009101|Ga0105247_10090133All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1945Open in IMG/M
3300009143|Ga0099792_10213632All Organisms → cellular organisms → Bacteria → Proteobacteria1104Open in IMG/M
3300009148|Ga0105243_10196377All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1766Open in IMG/M
3300009148|Ga0105243_12300135All Organisms → cellular organisms → Bacteria → Proteobacteria576Open in IMG/M
3300009177|Ga0105248_10668369Not Available1172Open in IMG/M
3300009551|Ga0105238_10431927All Organisms → cellular organisms → Bacteria → Proteobacteria1313Open in IMG/M
3300009551|Ga0105238_11790435All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas → Stenotrophomonas maltophilia group → Stenotrophomonas maltophilia646Open in IMG/M
3300009553|Ga0105249_12144028All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales632Open in IMG/M
3300010036|Ga0126305_10108825All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1676Open in IMG/M
3300010400|Ga0134122_11496250All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales694Open in IMG/M
3300010403|Ga0134123_12632452Not Available570Open in IMG/M
3300011119|Ga0105246_11980864All Organisms → cellular organisms → Bacteria → Proteobacteria561Open in IMG/M
3300012200|Ga0137382_10596457All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales789Open in IMG/M
3300012212|Ga0150985_107808104All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales905Open in IMG/M
3300012362|Ga0137361_10595947All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1013Open in IMG/M
3300012469|Ga0150984_104938905All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales634Open in IMG/M
3300012582|Ga0137358_10410962All Organisms → cellular organisms → Bacteria → Proteobacteria915Open in IMG/M
3300012892|Ga0157294_10085799All Organisms → cellular organisms → Bacteria → Proteobacteria784Open in IMG/M
3300012905|Ga0157296_10021107All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1277Open in IMG/M
3300012905|Ga0157296_10359795All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales531Open in IMG/M
3300012923|Ga0137359_10096560All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2607Open in IMG/M
3300012924|Ga0137413_10186894All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1383Open in IMG/M
3300012927|Ga0137416_11817720All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas → Stenotrophomonas maltophilia group → Stenotrophomonas maltophilia557Open in IMG/M
3300012929|Ga0137404_10146524All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1959Open in IMG/M
3300012930|Ga0137407_11388290All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales668Open in IMG/M
3300012944|Ga0137410_11969571All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales519Open in IMG/M
3300012960|Ga0164301_10951129All Organisms → cellular organisms → Bacteria → Proteobacteria671Open in IMG/M
3300012984|Ga0164309_10419401All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1003Open in IMG/M
3300012987|Ga0164307_10092949All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes1866Open in IMG/M
3300012987|Ga0164307_10276901All Organisms → cellular organisms → Bacteria → Proteobacteria1185Open in IMG/M
3300012989|Ga0164305_10339825All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1126Open in IMG/M
3300013297|Ga0157378_11856093All Organisms → cellular organisms → Bacteria → Proteobacteria651Open in IMG/M
3300013308|Ga0157375_11009223All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales972Open in IMG/M
3300013308|Ga0157375_11694449All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales748Open in IMG/M
3300013308|Ga0157375_11885837All Organisms → cellular organisms → Bacteria → Proteobacteria709Open in IMG/M
3300014326|Ga0157380_13538593All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales501Open in IMG/M
3300014968|Ga0157379_10184941All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes1882Open in IMG/M
3300014968|Ga0157379_12097580Not Available560Open in IMG/M
3300014969|Ga0157376_11660912All Organisms → cellular organisms → Bacteria → Proteobacteria674Open in IMG/M
3300015051|Ga0137414_1180443All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1621Open in IMG/M
3300015372|Ga0132256_100666111All Organisms → cellular organisms → Bacteria → Proteobacteria1156Open in IMG/M
3300015374|Ga0132255_101161815All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1162Open in IMG/M
3300017792|Ga0163161_10332215All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1204Open in IMG/M
3300017792|Ga0163161_11582523All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales577Open in IMG/M
3300017965|Ga0190266_10824114All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales599Open in IMG/M
3300018055|Ga0184616_10049452All Organisms → cellular organisms → Bacteria → Proteobacteria1402Open in IMG/M
3300018067|Ga0184611_1124828All Organisms → cellular organisms → Bacteria904Open in IMG/M
3300018067|Ga0184611_1192107All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales726Open in IMG/M
3300018083|Ga0184628_10435845All Organisms → cellular organisms → Bacteria683Open in IMG/M
3300018465|Ga0190269_11422938All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales564Open in IMG/M
3300018466|Ga0190268_10257603All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS1911009Open in IMG/M
3300018476|Ga0190274_10043516All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC68603189Open in IMG/M
3300018476|Ga0190274_10442208All Organisms → cellular organisms → Bacteria → Proteobacteria1278Open in IMG/M
3300018476|Ga0190274_10808098All Organisms → cellular organisms → Bacteria → Proteobacteria996Open in IMG/M
3300021082|Ga0210380_10025093All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2535Open in IMG/M
3300021082|Ga0210380_10050437All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1796Open in IMG/M
3300021082|Ga0210380_10297709All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales734Open in IMG/M
3300021082|Ga0210380_10452403All Organisms → cellular organisms → Bacteria → Proteobacteria588Open in IMG/M
3300022756|Ga0222622_10698389All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales737Open in IMG/M
3300023066|Ga0247793_1053827All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales648Open in IMG/M
3300023102|Ga0247754_1113616All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales660Open in IMG/M
3300023263|Ga0247800_1101352All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales584Open in IMG/M
3300025297|Ga0209758_1000400All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales74944Open in IMG/M
3300025297|Ga0209758_1044257All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1629Open in IMG/M
3300025893|Ga0207682_10030891All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2148Open in IMG/M
3300025918|Ga0207662_11247452All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales528Open in IMG/M
3300025923|Ga0207681_10781613All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales797Open in IMG/M
3300025931|Ga0207644_10696173All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales847Open in IMG/M
3300025936|Ga0207670_11845156Not Available514Open in IMG/M
3300025937|Ga0207669_10864380All Organisms → cellular organisms → Bacteria → Proteobacteria753Open in IMG/M
3300025940|Ga0207691_10180574All Organisms → cellular organisms → Bacteria → Proteobacteria1844Open in IMG/M
3300025945|Ga0207679_10248223All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1512Open in IMG/M
3300026035|Ga0207703_11104204All Organisms → cellular organisms → Bacteria → Proteobacteria762Open in IMG/M
3300026089|Ga0207648_10171566All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1917Open in IMG/M
3300026116|Ga0207674_11923750All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria557Open in IMG/M
3300026118|Ga0207675_101414659All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales716Open in IMG/M
3300027903|Ga0209488_10385824All Organisms → cellular organisms → Bacteria → Proteobacteria1038Open in IMG/M
3300027907|Ga0207428_10685286All Organisms → cellular organisms → Bacteria → Proteobacteria734Open in IMG/M
3300028379|Ga0268266_11633208All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium620Open in IMG/M
3300028824|Ga0307310_10106533All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1253Open in IMG/M
3300031152|Ga0307501_10053088All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales913Open in IMG/M
3300031170|Ga0307498_10004656All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2381Open in IMG/M
3300031716|Ga0310813_10303816All Organisms → cellular organisms → Bacteria → Proteobacteria1347Open in IMG/M
3300031716|Ga0310813_10735496All Organisms → cellular organisms → Bacteria → Proteobacteria883Open in IMG/M
3300031847|Ga0310907_10108272All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1213Open in IMG/M
3300031854|Ga0310904_10019285All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC68602966Open in IMG/M
3300031854|Ga0310904_10463431All Organisms → cellular organisms → Bacteria → Proteobacteria843Open in IMG/M
3300031854|Ga0310904_11161042All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales555Open in IMG/M
3300031858|Ga0310892_10257035All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1081Open in IMG/M
3300032012|Ga0310902_10442341All Organisms → cellular organisms → Bacteria → Proteobacteria836Open in IMG/M
3300032013|Ga0310906_10383036All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales924Open in IMG/M
3300032017|Ga0310899_10270374All Organisms → cellular organisms → Bacteria → Proteobacteria779Open in IMG/M
3300032421|Ga0310812_10143669All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1010Open in IMG/M
3300033412|Ga0310810_10044439All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales5423Open in IMG/M
3300034820|Ga0373959_0137738All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales609Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil13.64%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil7.79%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil7.14%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil5.19%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere5.19%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere4.55%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.25%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.25%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment2.60%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.60%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.60%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.60%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere2.60%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.60%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.60%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere2.60%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.95%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.95%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere1.95%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.95%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.95%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.95%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.30%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.30%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.30%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.30%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere1.30%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.30%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.30%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.65%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.65%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.65%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.65%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.65%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.65%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.65%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.65%
Arabidopsis RootHost-Associated → Plants → Roots → Endophytes → Unclassified → Arabidopsis Root0.65%
Rhizosphere SoilHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil0.65%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.65%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.65%
Switchgrass, Maize And Mischanthus LitterEngineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter0.65%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459020Litter degradation NP2EngineeredOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300003215Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMFHost-AssociatedOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005511Combined assembly of arab plate scrape MF_Col (Combined Assembly)Host-AssociatedOpen in IMG/M
3300005515Combined assembly of arab plate scrape MF_Cvi (Combined Assembly)Host-AssociatedOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005983Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1Host-AssociatedOpen in IMG/M
3300005985Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2Host-AssociatedOpen in IMG/M
3300006178Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2Host-AssociatedOpen in IMG/M
3300006195Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1Host-AssociatedOpen in IMG/M
3300006578Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006581Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006953Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012892Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1EnvironmentalOpen in IMG/M
3300012905Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2EnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015051Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300017965Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 TEnvironmentalOpen in IMG/M
3300018055Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_coexEnvironmentalOpen in IMG/M
3300018067Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coexEnvironmentalOpen in IMG/M
3300018083Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1EnvironmentalOpen in IMG/M
3300018465Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 ISEnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300021082Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redoEnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300023066Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S223-509R-6EnvironmentalOpen in IMG/M
3300023102Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S184-509B-5EnvironmentalOpen in IMG/M
3300023263Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S092-311B-6EnvironmentalOpen in IMG/M
3300025297Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes)Host-AssociatedOpen in IMG/M
3300025893Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300031152Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_SEnvironmentalOpen in IMG/M
3300031170Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_SEnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031847Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4EnvironmentalOpen in IMG/M
3300031854Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1EnvironmentalOpen in IMG/M
3300031858Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2EnvironmentalOpen in IMG/M
3300032012Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3EnvironmentalOpen in IMG/M
3300032013Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3EnvironmentalOpen in IMG/M
3300032017Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4EnvironmentalOpen in IMG/M
3300032421Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M
3300034820Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
2NP_009991002170459020Switchgrass, Maize And Mischanthus LitterFAVRRALRAPQPGPLRRLLAHFVQWRQHRAEQEIAIRLGLTSGRLTDEIERRMNERLFNGGGFRG
JGI10216J12902_10380880813300000956SoilMSVLAHTHHFAYRQAPRPIRQPGAFRRLIGRFLEWRQRRVEQDIAIHLGLTGGHITDEIERRMNERLFSNSSFRS*
JGI10216J12902_10803889723300000956SoilMSVLVHTPDFAVRRALRASQPGLLRRLLARFLQWRQRRAEQEIAIRLGLTSGRLTDEIERQISERLLNGGGFRG*
JGI10216J12902_11412123213300000956SoilMSVLAHTPGFSYRQAPRATHKPGRFRRLLGRFLQWRQQRVEQDIAIRLGLTSGRLTDEIERRMNERLMSGGGFRG*
JGI10216J12902_11855828713300000956SoilMSVLAHATDFAYRRAPSVIRQPGLFRRLLDRFLKWRQRQVEQDIAIRLGLTSGRLTDEIERRMNERLLGGGGFRG*
C688J35102_11898358923300002568SoilAHAHHAAYGQAPRPIRQPGAFRRLLGRFLQWRQRRVEEDIAIHLGLSGGHITDEIERRMNERLFSNGSFRS*
JGI25153J46596_1000266093300003215Arabidopsis RhizosphereMSVLTHTSHIAYSAAPRAARQPGQFRRLLDRFLEWRQRRVEEDIAIHLGVTGGHITDEIERRIFERLMSRGGFRG*
Ga0062593_10007208423300004114SoilMSVLAHTPDFAYRSAPRTLSRPGRFRRLVRSFLEWRQRRAEQEIAIHLGLTGGHITDEIERRMNERLFGNGGFRA*
Ga0062593_10154356613300004114SoilMSVLAHTHHFAYRQAPRPIRQPGAFRRLIGRFLEWRQRRVEQDIAIHLGLTGGHITDEIERRMNERLFSNNSFRS*
Ga0063455_10136047323300004153SoilMSILAHAADFADRRALRAVRQPGLVRRFLQWRQRQAEQAIAIHLGLTGGHITDEIERRMTERLTSGGGFRG*
Ga0062589_10048133323300004156SoilMSVLTQSADFAPRALRTPRPGPFGRLLTRFMQWRQRRAEQEIAIRLGLTSGRLTDEIERRMNERLFGNGSLRG*
Ga0062589_10070025813300004156SoilMSVLAHTHHFAYGQAPRPIRQPGAFRRLIGRFLEWRQRRVEQDIAIHLGLTGGHITDEIERRMNERLFSNSSFRS*
Ga0062589_10103373123300004156SoilMSVLAHTSDFTDRRALRASPRPGLLRRFLQWRQHQAEQAIAFHLGLTGGRLTDEIERRMTERLMGGGGFRG*
Ga0062590_10028535213300004157SoilDRRALRASPRPGLLRRFLQWRQHQAEQAIAFHLGLTGGRLTDEIERRMTERLMGGGGFRG
Ga0062590_10099005523300004157SoilMSVFAHTPDFAYDRALRTIPQPGPFCRSLRRFLQWRQRRVEQDIAIRLGLTGGHITDEIERRMAERLISSGGFRN*
Ga0062592_10131102423300004480SoilMSVLAHTPDFVYRRAPSVTRQPGLFRRLLDRFLKWRQRQVEQDIAIRLGLTSGRLTDEIERRMNERLLGGGGFRG*
Ga0062591_10084031523300004643SoilMSVLAHTHHFAYGQAPRPIRQPGAFRRLIGRFLEWRQRRVEQDIAIHLGLTGGHITDEIERRMNERLFSNNSFRS*
Ga0062591_10114824623300004643SoilMSVLAPARDFAYPRATHAIRRPGVFRRLVNSFLQWRQRRAEQDIAIHLGLTGGHITDEIERRMSERLIGRGGFRG*
Ga0062594_10144736723300005093SoilMSVLAHSQDFASRRALHSVSEPGPVRRLLRRYLQWRQLRVEQDIAARLGLTGGRLTDDIERRMTERLIHSAGFRG*
Ga0066388_10340698023300005332Tropical Forest SoilFAHRFAPRSLSEPGRFRRLLRSFLEWRQRRVEQEIAIHLGLSGGHITDEIERRMNERLFNNGGFRS*
Ga0068869_10180317223300005334Miscanthus RhizosphereMSVLAHTSDFAHRRALRAAPRPGLLRRFLQWRQQQAEQAIALHLGLTGGRLTDEIERRMTERLTSGGGFRS*
Ga0070682_10072779823300005337Corn RhizosphereSNMSVLAHTSDFTDRRALRASPRPSLLRRFLQWRQHQAEQAIAFHLGLTGGRLTDEIERRMTERLMGGGGFRG*
Ga0070687_10019931323300005343Switchgrass RhizosphereMSVLAHTSDFADRRALRATPRSGLLRRFLQWRQLQAEQAIAFHLGLTGGRLTDEIERRMTERLMGGGGFRG*
Ga0070668_10116048123300005347Switchgrass RhizosphereSSMSVFAHTPDFAYDRALRTIPQPGPFCRSLRRFLQWRQRRVEQDIAIRLGLTGGHITDEIERRMAERLISSGGFRN*
Ga0070669_10181507623300005353Switchgrass RhizosphereMSVLAHTHHFAYGQAPRPIRQPGAFRRLIGRFLEWRQRRVEQDIAIHLGLTGGHITDEIERRMNERLFSNGGFRG*
Ga0070675_10069645323300005354Miscanthus RhizosphereMSVLVQSTDFALRRALRTPQPGPLSRLLARFVQRRQRRAEQEIAIRLGLTSGHLTDEIERRMNERLFSNGSFRG*
Ga0070674_10158433013300005356Miscanthus RhizosphereMSVLAHTPGFGYPQAVRASPQSGPFRRLLRRFLQWRQRRAEQEIAIHLGLTSGHITDEIERRMNERLFSNGGFRG*
Ga0070674_10221427313300005356Miscanthus RhizosphereMSVFAHTPDFAYDRALRTIPQPGPFRRSLRRFLQWRQRRVEQDIAIRLGLTGGHITDEIERRMAERLISGGGFRN*
Ga0070673_10130483113300005364Switchgrass RhizosphereMSVFAHTPDFAYDRALRTIPQPGPFCRSLRRFLQWRQRRVEQDIAIRLGLTGGHITDEIERRMAERLIGGGGFRN*
Ga0070688_10090461013300005365Switchgrass RhizosphereMSVFAHTPDFAYDRALRTIPQPGPFCRSLRRFLQWRQRRVEQDIAIRLGLTGGHITDEIERRMAERLISGGGFRN*
Ga0070667_10126516013300005367Switchgrass RhizosphereMSVLAHTSDFADRRALRATPRSGLLRRFLQWRQLQAEQAIAFHLGLTGGRLTDEIERRMTERLTSGGGFRS*
Ga0070700_10081318323300005441Corn, Switchgrass And Miscanthus RhizosphereMSVLAHSQDFASRRALHSVSEPGPVRRLLRRYLQWRQLRVEQDIAARLGLTGGRLTDDIERRMTERLI
Ga0070700_10183909413300005441Corn, Switchgrass And Miscanthus RhizosphereMSVLVQSTDFALRRALRTPQPGPLSRLLARFVQRRQRRAEQEIAIRLGLTSGHLTDEIERRMNERLFGNRGFRG*
Ga0070663_10061562413300005455Corn RhizosphereMSVLAHASGFADPRALRANRQPGRLRQLFRRFLQWRQRQAEHAIAIRLGLTGGRITDEIE
Ga0070678_10073658613300005456Miscanthus RhizosphereMSVFAHTPDFAYDRALRTIPQPGPFCRSLRRFLQWRQRRVEQDVAIRLGLTGGHITDEIERRMAERLISSGGFRN*
Ga0077121_1034469523300005511Arabidopsis RhizosphereMSVLAHTSHIAYRTAPRAARQPGQFRRLLDRFLEWRQRRVEQDIAIHLGITGGYITDEIERRIFERLMTRGGFRG*
Ga0077122_1063847713300005515Arabidopsis RootMSVLAHTSAIAYRLAPRAARQPGQLRQLLDRFLQWRQHRAEQDIAIHLGLTGGHITDEIERRISEHLMSRGGFRG*
Ga0070672_10081443523300005543Miscanthus RhizosphereMSVFAHTPDFAYDRALRTIPQPGPFRRSLRRFLQWRQRRVEQDIAIRLGLTGGHITDEIERRMAERLISSGGFRN*
Ga0070665_10158971823300005548Switchgrass RhizosphereMSILAHPSDFADRRVLRAIPRPGLFRRLLQWRQRRAEHAIAIHLGLTGGRITDEIERRMTERLTSGSGFRS*
Ga0068866_1052719623300005718Miscanthus RhizosphereMSILAHPSDFADRRVLRAMPRPGLFRRLLQWRQRRAEHAIAIHLGLTGGRITDEIERRMTERLTSGGGFRG*
Ga0068866_1143180113300005718Miscanthus RhizosphereMSVLTQSTDFAPLRALRTPQPGPLGRLLARFMQRRQQRAEQEIAIRLGLTSGRLTDEIERRMNERLFSNGSFRG*
Ga0068861_10227272923300005719Switchgrass RhizosphereALRASPQSGPFRRLLRRFLQWRQRRAEQEIAIHLGLTSGHITDEIERRMNERLFSNGGFRG*
Ga0066903_10350391423300005764Tropical Forest SoilMSVVTHTPDFAYRRARRATPQPGPFRRLLRRFLQWRQHRVEQDIAIRLGLTGGHITDEIERRMSERLIRGGGFRG*
Ga0066903_10405422423300005764Tropical Forest SoilMSFLAHTPDFAYRSAPRTLSRPSRFRQLVRSFLEWRQRRAEQEIAIHLGLTGGHITDEIERRMNERLFGNGGFRA*
Ga0068858_10099231713300005842Switchgrass RhizosphereMSILAHAAGFADRRALRAVRQPGLVRRFLQWRQRQAEQAIAIHLGLTGGHITDEIERRMTERL
Ga0081540_101660123300005983Tabebuia Heterophylla RhizosphereMSILARTPDFAYWQVPHTLRLAGPFRRLLRSFLQWRQRRAELDIAIHLGLTGGHITDEIERRMSERLFSGGGFRA*
Ga0081539_1002613033300005985Tabebuia Heterophylla RhizosphereMSVLAHTPDFAYRRAQRATPRQPGTLRRLLDRYLQWRQRRVEQDIAIRLGLTSGHITDEIERRMNEHFFSNGSFRV*
Ga0081539_1038009723300005985Tabebuia Heterophylla RhizosphereMSVFAHAANFADRRTITIHQPGSLRRLLRRYLQWRQRRVEQDIAIRLGLTGGRLTDEIERRMTERLISGGGFRG*
Ga0075367_1050761523300006178Populus EndosphereRAPSVTRQPGLFRRLLDRFLTWRQRQVEQDIAIRLGLTSGRLTDEIERRMNERLLGGGGFRG*
Ga0075366_1001866033300006195Populus EndosphereMSVLAHATDFAYRRAPSVTRQPGLFRRLLDRFLTWRQRQVEQDIAIRLGLTSGRLTDEIERRMNERLLGGGGFRG*
Ga0074059_1194730713300006578SoilMSVFAHTPDFAYDRALRTTTQPGPFRRSLRRFLQWRQRRVEQDIAIRLGLTGGHITDEIERRMAERLISGGGFRN*
Ga0074048_1283838223300006581SoilMSVLAHTSDFADRRALRVTPQPGLLRRFLQWRQQQAEQAIAFHLGLTGGRLTDEIERRMTERLTSGGGFRS*
Ga0075428_10007645233300006844Populus RhizosphereMSVLAHTPDFALRRALRAPQPGPLRRLLAHFVQWRQHRAEQEIAIRLGLTSGRLTDEIERRMNERLFNGGGFRG*
Ga0075426_1128861623300006903Populus RhizosphereMSVLAHTADFALRRALRAPQPGPLRRLLAHFVQWRQHRAEQEIAIRLGLTSGRLTDEIERRMNERLFNGGGFRG*
Ga0075424_10011003733300006904Populus RhizosphereMSVLAHTPDFAVRRALRAPQPGPLRRLLAHFVQWRQHRAEQEIAIRLGLTSGRLTDEIERRMNERLFNGGGFRG*
Ga0074063_1002209823300006953SoilMSVLAHTSDFAHRRALRAAPRPGLLRRFLQWRQQQAEQAIAFHLGLTGGRLTDEIERRMTERLTSGGGFRS*
Ga0074063_1354233513300006953SoilIPDFAYDQALRTIPQPGPFRRSLRRFLQWRQRRVEQDIAIRLGLTGGHITDEIERRMAERLISGGGFRN*
Ga0079219_1136531323300006954Agricultural SoilMSILAHTSDFADRRALRAVPQPGLVRRFLQWRQRQAEQAIAFRLGLTGGRLTDEIERRMTERLTRGGGFRA*
Ga0111539_1298007123300009094Populus RhizosphereFAYRRAPSVIRQPGLFRRLLDRFLKWRQRQVEQDIAIRLGLTSGRLTDEIERRMNERLLGGGGFRG*
Ga0105247_1009013323300009101Switchgrass RhizosphereMSILAHAAGFADRRALRAVRQPGLVRRFLQWRQRQAEQAIAIHLGLTGGHITDEIERRMTERLTSGGGFRA*
Ga0099792_1021363213300009143Vadose Zone SoilMSVLAHTSDFADPRALRATPRSGLLRRFLQWRQHQAEQAIAFHLGLTGGRLTDEIERRMTERLTSGGGFRS*
Ga0105243_1019637723300009148Miscanthus RhizosphereMSVLAHTSDFTDRRALGASPRPGLLRRFLQWRQHQAEQAIAFHLGLTGGRLTDEIERRMTERLMGGGGFRG*
Ga0105243_1230013513300009148Miscanthus RhizosphereMSILAHAAGFADRRALRAVRQPGLVRRFLQWRQRQAEQAIAIHLGLTGGHITDEIERRMTERLTSGGGFRG*
Ga0105248_1066836913300009177Switchgrass RhizosphereMSVFAHTPDFAYDRALRTITQPGPFRRSLRRFLQWRQRRVEQDIAIRLGLTGGHITDEIERRMAERLISGGGFRN*
Ga0105238_1043192723300009551Corn RhizosphereMSVLAHTSDFTDRRALRASPRPGLLRRFLQWRQHQAEQAIAFHLGLTGGRLTDEIERRMTERLTSG
Ga0105238_1179043523300009551Corn RhizosphereMSILAHPSDFADRRTLRDIRRPGLIRRFLQWRQRQAEQAIAVHLGLTGGRITDEIERRMMDRLTRGSGFGS*
Ga0105249_1214402823300009553Switchgrass RhizosphereMCYQISGENYSPIDEDRRSNMSVLAHTPGFGYPQALRASPQSGPFRRLLRRFLQWRQRRAEQEIAIHLGLTSGHITDEIERRMNERLFSNGGFRG*
Ga0126305_1010882523300010036Serpentine SoilMCYQISGENYSPIDEDRRSNMSVLAHTPGFGYPQALRASPQSGPFRRLLRRFLQWRQRRAEQEIAIHLGLTSGHITDEIERRMNERLFSNSGFRG*
Ga0134122_1149625023300010400Terrestrial SoilMSVLTQSTDFAPRRALRASQPGPLGRLLTRFMQWRQRRAEQEIAIRLGLTSGRLTDEIERRMNERLFGNGSLRG*
Ga0134123_1263245213300010403Terrestrial SoilMSVLAPTRDFAYPRATHAIRRPGVFRRLVNSFLQWRQRRIEQDIAIHLGLTGGHITDEIERRMSERLIGRGGFRG*
Ga0105246_1198086423300011119Miscanthus RhizosphereMSILAHPSDFADRRALRAIPRPGLLRRLLQWRQRRAEHAIAIHLGLTGGRITDEIERRMTERLTSG
Ga0137382_1059645723300012200Vadose Zone SoilMSILAHNSDFADRRALRATPRSGLLRRFLQWRQHQAEQAIAFHLGLTGGRLTDEIERRMTERLTSGGGFRS*
Ga0150985_10780810423300012212Avena Fatua RhizosphereENYSSINRRSNMSILAHAADFADRRALRAVRQPGLVRRFMQWRQRQAEQAIAIHLGLTGGHITDEIERRMTERLTSGGGFRG*
Ga0137361_1059594723300012362Vadose Zone SoilMSVLAHISDFADRRALRATPRSGLLRRFLQWRQHQAEQAIAFHLGLTGGRLTDEIERRMTERLTSGGGFRS*
Ga0150984_10493890523300012469Avena Fatua RhizosphereENYSSKNRRSNMSILAHAADFADRRALRAVRQPGLVRRFMQWRQRQAEQAIAIHLGLTGGHITDEIERRMTERLTSGGGFRG*
Ga0137358_1041096213300012582Vadose Zone SoilMSIFAHNSNFADRRALRATPRPGLLRRFLQWRQHQAEQAVAFHLGLTGGRLTDEIERRMTERLTSGGGFRS*
Ga0157294_1008579923300012892SoilMSVLAHTHHFAYGQAPRPIRQPGAFRRLLGRFLQWRQRRVEEDIAIHLGLSGGHITDEIERRMNER
Ga0157296_1002110723300012905SoilMSYQISGENYSPIDEDRRSNMSVLVHTPGFGYPQALRASPQSGPFRRLLRRFLQWRQRRAEQEIAIHLGLTSGHITDEIERRMNERLFSNSGFRG*
Ga0157296_1035979513300012905SoilEKQEPNMSVLAHTHHFAYRQAPRPIRQPGAFRRLIGRFLEWRQRRVEQDIAIHLGLTGGHITDEIERRMNERLFSNNSFRS*
Ga0137359_1009656023300012923Vadose Zone SoilMSVLAHISDFADRRALRATPRSALLRRFLQWRQHQAEQAIAFHLGLTGGRLTDEIERRMTERLTSGGGFRS*
Ga0137413_1018689423300012924Vadose Zone SoilMSVLAHTSDFADRRALRATPRPGLLRRFLQWRQHQAEQAIAFHLGLTGGRLTDEIERRMTERLTSGGGFRS*
Ga0137416_1181772023300012927Vadose Zone SoilMSVLAHTSDFADPRALRATPRSGLLRRFLQWRQHQAEQAIAFHLGLTGGRLTDEIERRMTERLTSGSGVRS*
Ga0137404_1014652423300012929Vadose Zone SoilMSVLAHTSDFADPRALRATPRSGLLRRFLQWRQHQAEQAVAFHLGLTGGRLTDEIERRMTERLTSGGGFRS*
Ga0137407_1138829023300012930Vadose Zone SoilALRRALRTPQPGPRGRLLARFAERRQRRAEQEIAIRLGLTSGRLTDEIERRMNERLFSNGGFRG*
Ga0137410_1196957113300012944Vadose Zone SoilRSNMSVLAHNSDFADRRALRATPRPGLLRRFLQWRQRQAEQAIAFHLGLTGGRLTDEIERRMTERLTSGGGFRS*
Ga0164301_1095112923300012960SoilMSILAHTSDFADRRALRAVRQPGLVRRFLQWRQRQAEQAIAIHLGLTGGHITDEIERRMTERLTSGGGFRG*
Ga0164309_1041940123300012984SoilMSILAHAAGFADRRALRAVRQPGLVRRFLQWRQRQAEQAIAIHLGLTGGHITDEIERRMTERLTRGGGFRA*
Ga0164307_1009294913300012987SoilMSILAHTSDFADRRALRAVPQPGLVRRFLQWRQRQAEQAIAIHLGLTGGHITDEIERRMTERLTRGGGFRA*
Ga0164307_1027690123300012987SoilMSILAHTSDFADRRALRAVRQPGLVRRFLQWRQRQAEQAIAFHLGLTGGHITDEIERRMTERLTRGGGFRA*
Ga0164305_1033982523300012989SoilFIHKQETNMSILAHTSDFTDRRARRAIPQPSLLRRFLQWRQRQAEQAIAIHLGLTGGHITDEIERRMTERLTSGGGFRG*
Ga0157378_1185609323300013297Miscanthus RhizosphereMSILAHAADFADRRALRAVRQPGLVRRFLQWRQRQAEQAIAIHLGLTGGHITDEIERRMTERLTSG
Ga0157375_1100922313300013308Miscanthus RhizosphereIMSVLTQSADFAPRALRTPRPGPFGRLLTRFMQWRQRRAEQEIAIRLGLTSGHLTDEIERRMTERLFSNRSFRG*
Ga0157375_1169444913300013308Miscanthus RhizosphereDRRSNMSVLAHTPGFGYPQAVRASPQSGPFRRLLRRFLQWRQRRAEQEIAIHLGLTSGHITDEIERRMNERLFSNGGFRG*
Ga0157375_1188583723300013308Miscanthus RhizosphereMSVFAHTPDFAYDRALRTIPQPGPFCRSLRRFLQWRQRRVEQDVAIRLGLTGGHITDEIERRMPERLISSGGFRN*
Ga0157380_1353859323300014326Switchgrass RhizosphereQVRRTIMSVLTQSADFAPRALRTPRPGPFGRLLTRFMQWRQRRAEQEIAIRLGLTSGRLTDEIERRMNERLFGNGSLRG*
Ga0157379_1018494113300014968Switchgrass RhizosphereMSILAHTSDFTDRRVLPAIRQPGLVRRFLQWRQRQAEQAIAIHLGLTGGHITDEIERRMTERLTSGGGFRG*
Ga0157379_1209758023300014968Switchgrass RhizosphereMSILAHTSDFADRRALRAVPQPGLVRRFLQWRQRQAEQAIAFHLGLTGGHITDEIERRMTERLMGGGGFRG*
Ga0157376_1166091223300014969Miscanthus RhizosphereMSILAHAAGFADRRALRAVRQPGLVRRFLQWRQRQAEQAIAIHLGLTGGHITDEIERRMTERLTSGRGFRS*
Ga0137414_118044333300015051Vadose Zone SoilMSIFAHNSNFADRRALACHPPAACLLRRFLQWRQRQAELAIAFHLRPHRRDASPTKSERRMTERLTSGGGFRS*
Ga0132256_10066611123300015372Arabidopsis RhizosphereMSVLAHTPDFAYRSAPRTLSRPSRFRRLVRSFLEWRQRRAEQEIAIHLGLTGGHITDEIERRMNERLFGNGGFRA*
Ga0132255_10116181513300015374Arabidopsis RhizosphereMSFLAHTPDFAYRSAPRTLSRPGRFRRLVRSFLEWRQRRAEQEIAIHLGLTGGHITDEIERRMNERLFGNGGFRA*
Ga0163161_1033221523300017792Switchgrass RhizosphereMSVFAHTPDFACDRALRTIPQPGPFCRSLRRFLQWRQRRVEQDIAIRLGLTGGHITDEIERRMAERLISSGGFRN
Ga0163161_1158252323300017792Switchgrass RhizosphereLAHAAGFADRRALRAVRQPGLVRRFLQWRQRQAEQAIAIHLGLTGGHITDEIERRMTERLTSGGGFRG
Ga0190266_1082411423300017965SoilKTKKYNNHANKPILDLFTYREKQEPNMSVLAHTHHFAYGQAPRPIRQPGAFRRLIGRFLQWRQRRVEQEIAIHLGLTGGHITDEIERRMNERLFSNNSFRS
Ga0184616_1004945223300018055Groundwater SedimentMSVLAHTPGFGYPQALRARPQSGPFRRLLRRFLQWRQRRAEQEIAIHLGLTSGHITDEIERRMNERLFSNGGFRG
Ga0184611_112482823300018067Groundwater SedimentMSVFAHTPDFAYDRALRTIPQPGPFCRSLRRFLQWRQRRVEQDVAIRLGLTGGHITDEIERRMAERLISSGGFRN
Ga0184611_119210723300018067Groundwater SedimentMSVFAHASDFADRRALRATPQPGLLRRFLQWRQHQAEQAIAFHLGLTGGRLTDEIERRMTERLTSGGGFRS
Ga0184628_1043584513300018083Groundwater SedimentMSVFAHTPDFAYDRALRTIPQPGPFCRSLRRFLQWRQRRVEQDIAIRLGLTGGHITDEIERRMAERLIGGGGFRN
Ga0190269_1142293813300018465SoilMSVLTQSTDFAPRRALRTPQPGPLSRLLARFVQRRQRRAEQEIAIRLGLTSGRLTDEIERRMNERLFSNGSFRG
Ga0190268_1025760323300018466SoilMSVLAHISDFAARRTLRAVSQPGAFRRWFRSFQQARQRRAEQDIAVRLGLTGGRITDEIERRMFERLASGGGFRG
Ga0190274_1004351633300018476SoilMSVLAHTPGFGYPQGLRASPQSGPFRRLLRRFLQWRQRRAEQEIAIHLGLTSGHITDEIERRMNERLFSNGGFRG
Ga0190274_1044220823300018476SoilMSVLAHTHHFAYGQAPRPIRQPGAFRRLIGRFLEWRQRRVEQDIAIHLGLTGGHITDEIERRMNE
Ga0190274_1080809813300018476SoilHANFADRRARRAIPQPSLIRTLFRRLLQWRQRRVEQDIAIRLGLTGGRLTDEIERRITERLIAGGGFRN
Ga0210380_1002509323300021082Groundwater SedimentMSVLAHTPGFGYPQALRASPQSGPFRRLLRRFLQWRQRRAEQEIAIHLGLTSGHITDEIERRMNERLFSNGGFRG
Ga0210380_1005043723300021082Groundwater SedimentMSVFAHTPDFAYDRALRTIPQPGPFCRSLRRFLQWRQRRVEQDIAIRLGLTGGHITDEIERRMAERLISSGGFRN
Ga0210380_1029770923300021082Groundwater SedimentMSVFAHASDFADRRALRATPRPGLLRRFLQWRQHQAEQAIAFHLGLTGGRLTDEIERRMTERLTSGGGFRS
Ga0210380_1045240313300021082Groundwater SedimentMSIVAHANFADRRARRAIPQPSLIRTLFRRLLQWRQRRVEQDIAIRLGLTGGRLTDEIERRITERLIAGGGFRN
Ga0222622_1069838913300022756Groundwater SedimentMSVLAHTSDFADRHALRATPRPGLLRRFLQWPQHQAEQAIAFHLGLTGGRLTDEIERRMTERLTSGGGFRS
Ga0247793_105382713300023066SoilFAYGQAPRPIRQPGAFRRLIGRFLEWRQRRVEQDIAIHLGLTGGHITDEIERRMNERLFSNNSFRS
Ga0247754_111361613300023102SoilMSVLAHTPGFGYPQAVRASPQSGPFRRLLRRFLQWRQRRAEQEIAIHLGLTSGHITDEIERRMNERLFSNGGFRG
Ga0247800_110135223300023263SoilVLAHTPGFGYPQALRASPQSGPFRRLLRRFLQWRQRRAEQEIAIHLGLTSGHITDEIERRMNERLFSNGGFRG
Ga0209758_1000400313300025297Arabidopsis RhizosphereMSVLTHTSHIAYSAAPRAARQPGQFRRLLDRFLEWRQRRVEEDIAIHLGVTGGHITDEIERRIFERLMSRGGFRG
Ga0209758_104425723300025297Arabidopsis RhizosphereMSVLAHTSHIAYRTAPRAARQPGQFRRLLDRFLEWRQRRVEQDIAIHLGITGGYITDEIERRIFERLMTRGGFRG
Ga0207682_1003089133300025893Miscanthus RhizosphereMSVLAHTSDFTDRRALRASPRPGLLRRFLQWRQHQAEQAIAFHLGLTGGRLTDEIERRMTERLMGGGGFRG
Ga0207662_1124745223300025918Switchgrass RhizosphereMSVLVQSTDFALRRALRTPQPGPLSRLLARFVQRRQRRAEQEIAIRLGLTSGHLTDEIERRMNERLFSNGSFRG
Ga0207681_1078161323300025923Switchgrass RhizosphereMSVLTQSADFAPRALRTPRPGPFGRLLTRFMQWRQRRAEQEIAIRLGLTSGRLTDEIERRMNERLFGNGSLRG
Ga0207644_1069617323300025931Switchgrass RhizosphereVSDSENYSSIDRRSNTSVLAHTSDFTDRRALRASPRPGLLRRFLQWRQHQAEQAIAFHLGLTGGRLTDEIERRMTERLMGGGGFRG
Ga0207670_1184515623300025936Switchgrass RhizosphereMSVLAHTHHFAYGQAPRPIRQPGAFRRLIGRFLEWRQRRVEQDIAIHLGLTGGHITDEIERRMNERLFSNNSFRS
Ga0207669_1086438023300025937Miscanthus RhizosphereMSVFAHTPDFAYDRALRTIPQPGPFRRSLRRFLQWRQRRVEQDIAIRLGLTGGHITYEIERR
Ga0207691_1018057423300025940Miscanthus RhizosphereMSVFAHTPDFAYDRALRTIPQPGPFRRSLRRFLQWRQRRVEQDIAIRLGLTGGHITDEIERRMAERLISSGGFRN
Ga0207679_1024822323300025945Corn RhizosphereMSVLAHTSDFADRRALRATPRSGLLRRFLQWRQLQAEQAIAFHLGLTGGRLTDEIERRMTERLMGGGGFRG
Ga0207703_1110420423300026035Switchgrass RhizosphereMSILAHAAGFADRRALRAVRQPGLVRRFLQWRQRQAEQAIAIHLGLTGGPITDEIERRMTERLPSGGGFR
Ga0207648_1017156613300026089Miscanthus RhizosphereMSVLTQSTDFAPRRALRTPQPGPLGRLLARFMQWRQRRAEQEIAIRLGLTSGRLTDEIERRMNEHLFGNGSFR
Ga0207674_1192375023300026116Corn RhizosphereMSVLVQSTDFALRRALRTPQPGPLSRLLARFVQRRQRRAEQEIAIRLGLTSGHLTDEIERRMTERLFSNRSF
Ga0207675_10141465923300026118Switchgrass RhizosphereMSVLAHTPGFGYPQALRASPQSGPFRRLLRRFLQWRQRRAEQEIAIHLGLTSGHITDEIERRMNERLFSNGSFRG
Ga0209488_1038582413300027903Vadose Zone SoilMSVLAHTSDFADPRALRATPRSGLLRRFLQWRQHQAEQAIAFHLGLTGGRLTDEIERRM
Ga0207428_1068528623300027907Populus RhizosphereMSVLAHTPDFALRRALRAPQPGPLRRLLAHFVQWRQHRAEQEIAIRLGLTSGRLTDEIERRMNERLFNGGGFRG
Ga0268266_1163320823300028379Switchgrass RhizosphereMSVFAHTPDFAYDRALRTIPQPGPFRRSLRRFLQWRQRRVEQDIAIRLGLTGGHITDEIERRMAERLISGGGFRN
Ga0307310_1010653323300028824SoilMSVLAHTSDFADRRALRATPRPGLLRRFLQWRQHQAEQAIAFHLGLTGGRLTDEIERRMTERLTSGGGFRS
Ga0307501_1005308823300031152SoilSNMSVLAHTSDFADRHALRATPRPGLLRRFLQWRQHQAEQAIAFHLGLTGGRLTDEIERRMTERLTSGGGFRS
Ga0307498_1000465633300031170SoilMSVLAHTSGFGYPQALRASPQSGPFRRLLRRFLQWRQRRAEQEIAIHLGLTSGHITDEIERRMNERLFSNGGFRG
Ga0310813_1030381623300031716SoilMSILAHAADFADRRALRAVRQPGLVRRFLQWRQRQAEQAIAIHLGLTGGHITDEIERRITERLTSGGGFRG
Ga0310813_1073549623300031716SoilMSVLAHTPDFAYRSAPRTLSRPGRFRRLVRSFLEWRQRRAEQEIAIHLGLTGGHITDEIERR
Ga0310907_1010827213300031847SoilGQAPRPIRQPGAFRRLIGRFLEWRQRRVEQDIAIHLGLTGGHITDEIERRMNERLFSNNSFRS
Ga0310904_1001928513300031854SoilMSVLAHTSDFAHRRALRAAPRPGMLRRFLQWRQQQAEQAIAFHLGLTGGRLTDEIERRMTERLTSGGGFRS
Ga0310904_1046343123300031854SoilMSVLAHTSDFTDRRALRASPRPGLLRRFLQWRQHQAEQAIAFHLGLTGGRLTDEIERRMTERLTSGGG
Ga0310904_1116104213300031854SoilNTMSVLTQSADFAPRRALRTPQPGPFGRLLTRFMQWRQRRAEQEIAIRLGLTSGRLTDEIERRMNERLFGNGSFRD
Ga0310892_1025703523300031858SoilMSVLTQSADFAPRRALRTPQPGPFGRLLTRFMQWRQRRAEQEIAIRLGLTSGRLTDEIERRMNERLFGNGSFRD
Ga0310902_1044234123300032012SoilMSVLTQSADFAPRRALRTPQPGPFGRLLTRFMQWRQRRAEQEIAIRLGLTSGRLTDEIERRMNERLFGNGSFR
Ga0310906_1038303623300032013SoilMSVLAHTSDFTDRRALRASPRPGLLRRFLQWRQHQAEQANAFHLGHTGGRLTDEIERRMTERLMGGGGFRG
Ga0310899_1027037423300032017SoilMSVLAHTSDFTDRRALRASPRPGLLRRFLQWRQHQAEQAIAFHLGLTGGRLTDEIERR
Ga0310812_1014366913300032421SoilMSILAHAAGFADRRALRAVRQPGLVRRFLQWRQRQAEQAIAIHLGLTGGHITAEIERRMTERLTSGGGFRG
Ga0310810_1004443953300033412SoilMSVLAHTPDFAYRSAPRTLSRPGRFRRLVRSFLEWRQRRAEQEIAIHLGLTGGHITDEIERRMNERLFGNGGFRA
Ga0373959_0137738_430_6093300034820Rhizosphere SoilRRALRAVRQPGLVRRFLQWRQRQAEQAIAIHLGLTGGHITDEIERRMTERLTSGGGFRG

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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