NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F044414

Metagenome / Metatranscriptome Family F044414

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F044414
Family Type Metagenome / Metatranscriptome
Number of Sequences 154
Average Sequence Length 56 residues
Representative Sequence MTFPKAAPSDETLPPGRVVRWVLLAGVILFSVGLYFRFGLHTPPMGTTPAGTATTSTP
Number of Associated Samples 119
Number of Associated Scaffolds 154

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.71 %
% of genes near scaffold ends (potentially truncated) 25.32 %
% of genes from short scaffolds (< 2000 bps) 70.78 %
Associated GOLD sequencing projects 105
AlphaFold2 3D model prediction Yes
3D model pTM-score0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (68.182 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(27.273 % of family members)
Environment Ontology (ENVO) Unclassified
(50.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(53.247 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 29.07%    β-sheet: 0.00%    Coil/Unstructured: 70.93%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.42
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 154 Family Scaffolds
PF00133tRNA-synt_1 33.12
PF07973tRNA_SAD 31.17
PF02824TGS 26.62
PF00108Thiolase_N 3.25
PF08264Anticodon_1 2.60
PF10458Val_tRNA-synt_C 1.30
PF02803Thiolase_C 0.65
PF12390Se-cys_synth_N 0.65
PF05343Peptidase_M42 0.65

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 154 Family Scaffolds
COG0060Isoleucyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 33.12
COG0143Methionyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 33.12
COG0495Leucyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 33.12
COG0525Valyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 33.12
COG0183Acetyl-CoA acetyltransferaseLipid transport and metabolism [I] 3.90
COG1362Aspartyl aminopeptidaseAmino acid transport and metabolism [E] 0.65
COG1363Putative aminopeptidase FrvXCarbohydrate transport and metabolism [G] 0.65
COG2195Di- or tripeptidaseAmino acid transport and metabolism [E] 0.65

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms68.18 %
UnclassifiedrootN/A31.82 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2032320005|FACEOR_FY84VJD01C4F5VAll Organisms → cellular organisms → Bacteria → Proteobacteria533Open in IMG/M
3300002558|JGI25385J37094_10001842All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca6913Open in IMG/M
3300002560|JGI25383J37093_10041663All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1510Open in IMG/M
3300002561|JGI25384J37096_10036418All Organisms → cellular organisms → Bacteria1915Open in IMG/M
3300002886|JGI25612J43240_1010658All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1349Open in IMG/M
3300002908|JGI25382J43887_10085804All Organisms → cellular organisms → Bacteria1684Open in IMG/M
3300002908|JGI25382J43887_10244885Not Available828Open in IMG/M
3300002916|JGI25389J43894_1018855All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1195Open in IMG/M
3300004153|Ga0063455_100377481All Organisms → cellular organisms → Bacteria823Open in IMG/M
3300005166|Ga0066674_10168251All Organisms → cellular organisms → Bacteria1039Open in IMG/M
3300005166|Ga0066674_10361060All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes681Open in IMG/M
3300005166|Ga0066674_10495514All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes551Open in IMG/M
3300005171|Ga0066677_10460253All Organisms → cellular organisms → Bacteria729Open in IMG/M
3300005172|Ga0066683_10047319All Organisms → cellular organisms → Bacteria2528Open in IMG/M
3300005172|Ga0066683_10685021All Organisms → cellular organisms → Bacteria610Open in IMG/M
3300005176|Ga0066679_10114133Not Available1657Open in IMG/M
3300005176|Ga0066679_10246593All Organisms → cellular organisms → Bacteria1150Open in IMG/M
3300005178|Ga0066688_10193924Not Available1288Open in IMG/M
3300005179|Ga0066684_10966586All Organisms → cellular organisms → Bacteria → Proteobacteria552Open in IMG/M
3300005180|Ga0066685_10607824All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes753Open in IMG/M
3300005180|Ga0066685_10844629All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes616Open in IMG/M
3300005180|Ga0066685_11058104Not Available533Open in IMG/M
3300005184|Ga0066671_10332043All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes961Open in IMG/M
3300005186|Ga0066676_10429377All Organisms → cellular organisms → Bacteria893Open in IMG/M
3300005406|Ga0070703_10526608All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria535Open in IMG/M
3300005444|Ga0070694_100025095All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes3854Open in IMG/M
3300005444|Ga0070694_100125621All Organisms → cellular organisms → Bacteria1846Open in IMG/M
3300005445|Ga0070708_100869775Not Available847Open in IMG/M
3300005451|Ga0066681_10327458All Organisms → cellular organisms → Bacteria940Open in IMG/M
3300005467|Ga0070706_101603613All Organisms → cellular organisms → Bacteria594Open in IMG/M
3300005468|Ga0070707_101331365Not Available684Open in IMG/M
3300005518|Ga0070699_100075413All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes2935Open in IMG/M
3300005518|Ga0070699_102188521All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes505Open in IMG/M
3300005536|Ga0070697_100921664Not Available775Open in IMG/M
3300005536|Ga0070697_100937436All Organisms → cellular organisms → Bacteria769Open in IMG/M
3300005566|Ga0066693_10245046Not Available708Open in IMG/M
3300005568|Ga0066703_10182586Not Available1269Open in IMG/M
3300005569|Ga0066705_10048887All Organisms → cellular organisms → Bacteria2368Open in IMG/M
3300005574|Ga0066694_10522843All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes553Open in IMG/M
3300006031|Ga0066651_10050823All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1940Open in IMG/M
3300006034|Ga0066656_10353570Not Available949Open in IMG/M
3300006034|Ga0066656_11040766All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes526Open in IMG/M
3300006046|Ga0066652_100075514All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes2643Open in IMG/M
3300006755|Ga0079222_10050265All Organisms → cellular organisms → Bacteria1932Open in IMG/M
3300006794|Ga0066658_10422418All Organisms → cellular organisms → Bacteria725Open in IMG/M
3300006796|Ga0066665_10038947All Organisms → cellular organisms → Bacteria3192Open in IMG/M
3300006852|Ga0075433_10217702All Organisms → cellular organisms → Bacteria1697Open in IMG/M
3300006852|Ga0075433_10252231All Organisms → cellular organisms → Bacteria1565Open in IMG/M
3300006854|Ga0075425_100861459All Organisms → cellular organisms → Bacteria1037Open in IMG/M
3300006854|Ga0075425_101790299All Organisms → cellular organisms → Bacteria690Open in IMG/M
3300006871|Ga0075434_101066453All Organisms → cellular organisms → Bacteria821Open in IMG/M
3300006903|Ga0075426_10115557All Organisms → cellular organisms → Bacteria1927Open in IMG/M
3300006903|Ga0075426_10866294All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes681Open in IMG/M
3300006914|Ga0075436_100187857All Organisms → cellular organisms → Bacteria1461Open in IMG/M
3300006914|Ga0075436_100296299All Organisms → cellular organisms → Bacteria1158Open in IMG/M
3300006914|Ga0075436_101251797All Organisms → cellular organisms → Bacteria561Open in IMG/M
3300007076|Ga0075435_100626902All Organisms → cellular organisms → Bacteria933Open in IMG/M
3300007076|Ga0075435_101405900Not Available611Open in IMG/M
3300007258|Ga0099793_10080784All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1483Open in IMG/M
3300009012|Ga0066710_100025566All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae6713Open in IMG/M
3300009090|Ga0099827_10477644Not Available1070Open in IMG/M
3300010320|Ga0134109_10006714All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis3146Open in IMG/M
3300010322|Ga0134084_10421959All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes525Open in IMG/M
3300010323|Ga0134086_10200770All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes745Open in IMG/M
3300010326|Ga0134065_10260045Not Available651Open in IMG/M
3300010333|Ga0134080_10469040All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes593Open in IMG/M
3300010333|Ga0134080_10568823Not Available547Open in IMG/M
3300010335|Ga0134063_10205722All Organisms → cellular organisms → Bacteria927Open in IMG/M
3300010400|Ga0134122_10255514All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1482Open in IMG/M
3300010401|Ga0134121_10837665Not Available887Open in IMG/M
3300012189|Ga0137388_10072241All Organisms → cellular organisms → Bacteria2879Open in IMG/M
3300012199|Ga0137383_10047084All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae3073Open in IMG/M
3300012202|Ga0137363_10353182All Organisms → cellular organisms → Bacteria1217Open in IMG/M
3300012203|Ga0137399_10876214Not Available756Open in IMG/M
3300012203|Ga0137399_10949655Not Available724Open in IMG/M
3300012204|Ga0137374_10348026All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Sumerlaeota → unclassified Candidatus Sumerlaeota → candidate division BRC1 bacterium ADurb.BinA2921196Open in IMG/M
3300012205|Ga0137362_10005092All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae9020Open in IMG/M
3300012208|Ga0137376_10587284Not Available964Open in IMG/M
3300012211|Ga0137377_10366978All Organisms → cellular organisms → Bacteria1377Open in IMG/M
3300012211|Ga0137377_10853376Not Available843Open in IMG/M
3300012349|Ga0137387_10308904Not Available1144Open in IMG/M
3300012357|Ga0137384_10376447All Organisms → cellular organisms → Bacteria1174Open in IMG/M
3300012360|Ga0137375_10114252All Organisms → cellular organisms → Bacteria2714Open in IMG/M
3300012361|Ga0137360_11217436Not Available651Open in IMG/M
3300012362|Ga0137361_10048367All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae3493Open in IMG/M
3300012388|Ga0134031_1030221Not Available575Open in IMG/M
3300012392|Ga0134043_1062631Not Available681Open in IMG/M
3300012407|Ga0134050_1359210Not Available653Open in IMG/M
3300012532|Ga0137373_11176321Not Available543Open in IMG/M
3300012685|Ga0137397_10447909Not Available962Open in IMG/M
3300012685|Ga0137397_10669683All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes771Open in IMG/M
3300012918|Ga0137396_10629723Not Available793Open in IMG/M
3300012918|Ga0137396_10932327Not Available634Open in IMG/M
3300012922|Ga0137394_10084670All Organisms → cellular organisms → Bacteria2656Open in IMG/M
3300012923|Ga0137359_10271932Not Available1510Open in IMG/M
3300014157|Ga0134078_10180364Not Available849Open in IMG/M
3300015242|Ga0137412_10214035All Organisms → cellular organisms → Bacteria1535Open in IMG/M
3300015264|Ga0137403_10054168All Organisms → cellular organisms → Bacteria4126Open in IMG/M
3300015358|Ga0134089_10143153Not Available940Open in IMG/M
3300017656|Ga0134112_10081311All Organisms → cellular organisms → Bacteria1203Open in IMG/M
3300017656|Ga0134112_10117773All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1007Open in IMG/M
3300018071|Ga0184618_10213960All Organisms → cellular organisms → Bacteria → Proteobacteria808Open in IMG/M
3300018433|Ga0066667_10401908Not Available1107Open in IMG/M
3300018468|Ga0066662_10015423All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae4123Open in IMG/M
3300018468|Ga0066662_12698432All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes526Open in IMG/M
3300019879|Ga0193723_1029753All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1648Open in IMG/M
3300019883|Ga0193725_1023421All Organisms → cellular organisms → Bacteria → Proteobacteria1676Open in IMG/M
3300019997|Ga0193711_1000502All Organisms → cellular organisms → Bacteria5328Open in IMG/M
3300020004|Ga0193755_1011042All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae2956Open in IMG/M
3300020004|Ga0193755_1015497All Organisms → cellular organisms → Bacteria2512Open in IMG/M
3300020170|Ga0179594_10017761All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae2112Open in IMG/M
3300021086|Ga0179596_10275172All Organisms → cellular organisms → Bacteria836Open in IMG/M
3300022195|Ga0222625_1760018All Organisms → cellular organisms → Bacteria1143Open in IMG/M
3300022534|Ga0224452_1000396All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae9439Open in IMG/M
3300025885|Ga0207653_10000082All Organisms → cellular organisms → Bacteria68982Open in IMG/M
3300025922|Ga0207646_10130427All Organisms → cellular organisms → Bacteria2262Open in IMG/M
3300026285|Ga0209438_1004027All Organisms → cellular organisms → Bacteria4987Open in IMG/M
3300026296|Ga0209235_1006550All Organisms → cellular organisms → Bacteria6516Open in IMG/M
3300026297|Ga0209237_1066877All Organisms → cellular organisms → Bacteria1710Open in IMG/M
3300026298|Ga0209236_1012288All Organisms → cellular organisms → Bacteria4990Open in IMG/M
3300026305|Ga0209688_1049204All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes794Open in IMG/M
3300026306|Ga0209468_1178979Not Available536Open in IMG/M
3300026307|Ga0209469_1017146All Organisms → cellular organisms → Bacteria → Thermodesulfobacteria → Thermodesulfobacteria → Thermodesulfobacteriales → Thermodesulfobacteriaceae2594Open in IMG/M
3300026310|Ga0209239_1116348All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1114Open in IMG/M
3300026314|Ga0209268_1188454All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes511Open in IMG/M
3300026319|Ga0209647_1254005Not Available588Open in IMG/M
3300026323|Ga0209472_1095041All Organisms → cellular organisms → Bacteria1195Open in IMG/M
3300026324|Ga0209470_1074796All Organisms → cellular organisms → Bacteria1566Open in IMG/M
3300026324|Ga0209470_1208178All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes820Open in IMG/M
3300026327|Ga0209266_1087246All Organisms → cellular organisms → Bacteria → Proteobacteria1399Open in IMG/M
3300026327|Ga0209266_1124367All Organisms → cellular organisms → Bacteria1090Open in IMG/M
3300026327|Ga0209266_1291666Not Available513Open in IMG/M
3300026524|Ga0209690_1086094All Organisms → cellular organisms → Bacteria1313Open in IMG/M
3300026528|Ga0209378_1053092All Organisms → cellular organisms → Bacteria → Proteobacteria1954Open in IMG/M
3300026530|Ga0209807_1030299All Organisms → cellular organisms → Bacteria2602Open in IMG/M
3300026536|Ga0209058_1019731All Organisms → cellular organisms → Bacteria4457Open in IMG/M
3300026536|Ga0209058_1023150All Organisms → cellular organisms → Bacteria4010Open in IMG/M
3300027873|Ga0209814_10361639Not Available636Open in IMG/M
3300031152|Ga0307501_10007811All Organisms → cellular organisms → Bacteria1674Open in IMG/M
3300031720|Ga0307469_10057525All Organisms → cellular organisms → Bacteria2489Open in IMG/M
3300031720|Ga0307469_12347670All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes520Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil27.27%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil22.08%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil12.34%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil9.74%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere8.44%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere8.44%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.55%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.30%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.30%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.30%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.65%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.65%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.65%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.65%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.65%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2032320005Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2-EnvironmentalOpen in IMG/M
3300002558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cmEnvironmentalOpen in IMG/M
3300002560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cmEnvironmentalOpen in IMG/M
3300002561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cmEnvironmentalOpen in IMG/M
3300002886Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cmEnvironmentalOpen in IMG/M
3300002908Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300002916Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cmEnvironmentalOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005184Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005406Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005566Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005574Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143EnvironmentalOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300006794Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300007788Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300010320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015EnvironmentalOpen in IMG/M
3300010322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015EnvironmentalOpen in IMG/M
3300010333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012388Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012392Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012407Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012532Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300015242Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015358Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300017656Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015EnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300019879Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2EnvironmentalOpen in IMG/M
3300019883Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2EnvironmentalOpen in IMG/M
3300019997Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3m2EnvironmentalOpen in IMG/M
3300020004Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2EnvironmentalOpen in IMG/M
3300020170Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021086Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300022195Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022534Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1EnvironmentalOpen in IMG/M
3300025885Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026285Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026296Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026297Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026298Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026305Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)EnvironmentalOpen in IMG/M
3300026306Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)EnvironmentalOpen in IMG/M
3300026307Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)EnvironmentalOpen in IMG/M
3300026310Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026314Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)EnvironmentalOpen in IMG/M
3300026319Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)EnvironmentalOpen in IMG/M
3300026320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)EnvironmentalOpen in IMG/M
3300026324Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)EnvironmentalOpen in IMG/M
3300026327Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)EnvironmentalOpen in IMG/M
3300026524Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)EnvironmentalOpen in IMG/M
3300026528Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)EnvironmentalOpen in IMG/M
3300026530Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)EnvironmentalOpen in IMG/M
3300026536Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)EnvironmentalOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300031152Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_SEnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
FACEORA_67042602032320005SoilMANPHSPLPTPSEETLPPGRVVRWIALAGVILFSVALYFRFGLQTPPLGTTPAATTTSTP
JGI25385J37094_1000184233300002558Grasslands SoilMTLPKSSSSDDALPAGRIVRWVLLAGVILLSVGLYFRFGLRTPPMGAAPAAGATTTATP*
JGI25383J37093_1004166323300002560Grasslands SoilMTSPSSLSDETLPPGRVVRWILLGGVILLSVGLYFRFGLHTPPMENAPAGSATTSTP*
JGI25384J37096_1003641823300002561Grasslands SoilMTFPKSAVQSSNETLPAGRVVRWVLLAGAILFSVGLYFRFGLKTPPMGTTPAGTATTSTP
JGI25612J43240_101065813300002886Grasslands SoilMTFPRSAPSDETLPSGRVVRWIVLAGVILFSVGLYFRFGVHTPPMGVTPAGTDTTSTP*
JGI25382J43887_1008580423300002908Grasslands SoilMTIPNSPSSDDTLPPGRVVRWVLLAGVILFSVGLYFRYGLRTPPMGAAPAAGVTTTATP*
JGI25382J43887_1024488513300002908Grasslands SoilDETLPPGRVVRWVLLAGVILFSVGLYFRFGSKTPPMGSTPAGTATTSTP*
JGI25389J43894_101885523300002916Grasslands SoilMTLPKSSSSDDALPAGRIVRWVLLAGVILLSVGLYFRFGLRTPPMGAAPA
Ga0063455_10037748123300004153SoilMTNPQAPSDETLPPGRVVRWIALAGVILFAVSLYFRFGLQTPPLGSTPAADTTSTP*
Ga0066674_1016825123300005166SoilMTLPQSQASDETVPPGRVVRWIFIAGIILFSVGLYFRYGLRTAPMGNAPAAGETTTATP*
Ga0066674_1036106013300005166SoilMTLPKSSATDDTLPPGRIVRWLFIAGVILFSVGLYFRFGLHTPPIESAPAADTTTATP*
Ga0066674_1049551413300005166SoilMTSSHPKPAASDETLPAGRVVRWIALAGVILFSVALYFEFGLHTPPFGSAPGATTSSSP*
Ga0066677_1046025323300005171SoilMTSPNLSPQSAADETLPPGRIVRWVLLAGVILFSVGLYFRFGLHTPPLGASPTGSAETSTP*
Ga0066683_1004731923300005172SoilMTSPTSEDTLPPGRVVRWLIFAGVILLSVGLYFRFGIHTPPMGAAPAGADTTSTP*
Ga0066683_1068502123300005172SoilMTSPSSPLPPQHPSASSEETLPPGRVVRWVLLAGMILFSVALYFRFALHTPPMENVPAGTATTSTP*
Ga0066679_1011413323300005176SoilMTSPNSAPPSPASSDETLPPGRVVRWVLLAGVILFSVGLYFRFGLHTPPMGASPTGSAETSTP*
Ga0066679_1024659323300005176SoilSSSSDDTLPPGRIVRWVMIAGVILLSVGLYFRFGLRTPPMGAAPAAGATTTATP*
Ga0066688_1019392413300005178SoilMTLPKSSSSDDALPAGRIFRWVLLAGVILLSVGLYFRFGLRTPPMGAAPAAGATTTATP*
Ga0066684_1096658623300005179SoilMTKAQAPSDETLPPGRVVRWVALAGVIMFAVSLYFRFGLQTPPLGTTPAATTTSTP*
Ga0066685_1060782413300005180SoilMTSPSSPLPPQHPSASSEETLPPGRVVRWVLLAGMILFSVGLYFRFALHTPPMENVPAGTATTSTP*
Ga0066685_1084462923300005180SoilMALPKSPASDETLPPGRIVRWIFIAGVILFSVGLYFRFGLHTPPFGTAPAAGETTPATP*
Ga0066685_1105810413300005180SoilLSDETLPPGRVVRWILLGGVILLSVGLYFRFGLHTPPMENAPAGSATTSTP*
Ga0066671_1033204323300005184SoilMTKPQAPSDETLPPGRVVRWVALAGVILFAVSLYFRFGLQTPPLGTTPAATTTS
Ga0066676_1042937723300005186SoilMTSPTSDDTLPPGRVVRWLIFAGVILLSVGLYFRFGIHTPPMGAAPAGTDTTSTP*
Ga0070703_1052660823300005406Corn, Switchgrass And Miscanthus RhizosphereMTFPRSAPSDETLPPGRVVRWVLLAGVILFAVGLYFRFGVHTPPMGITPAGTDTTSTP*
Ga0070705_10001001923300005440Corn, Switchgrass And Miscanthus RhizosphereVRWVVLAGMILFSVALYFRFGLHTPPMENVPAGTATSTP*
Ga0070694_10002509533300005444Corn, Switchgrass And Miscanthus RhizosphereMTDPKSSGSDEILPPGRIVRWLALGGVILLSVGLYFRFGLHTPPMGNAPAAGATTPATP*
Ga0070694_10012562123300005444Corn, Switchgrass And Miscanthus RhizosphereMTSPSSPPSQNPSASSEETLPPGRVVRWVVLAGMILFSVALYFRFGLHTPPMENVPAGTATSTP*
Ga0070708_10086977513300005445Corn, Switchgrass And Miscanthus RhizosphereMTLPTSSSSDDTLPPGRIVRWVMIAGVILLSVGFYFRFGLRTPPMGAAPAAGATTTATP*
Ga0066681_1032745823300005451SoilMTFPRSAPSDETLPSGRVVRWILLAGVILFSAGLYFRFGVHTPPMGVTPAGTDTTSTP*
Ga0070706_10160361323300005467Corn, Switchgrass And Miscanthus RhizosphereMTLPKSSSSDDTLPPGRIVRWVMIAGVILLSVGLYFRFGLRTPPMGAAPAAGATTTATP*
Ga0070707_10133136523300005468Corn, Switchgrass And Miscanthus RhizosphereMTLPKSSSSDETLPPGRIVRWVMIAGVILLSVGLYFRFGLRAPPMGAAPAAGATTTATP*
Ga0070699_10007541323300005518Corn, Switchgrass And Miscanthus RhizosphereMTLPKSSSSDETLPPGRIVRWVMIAGVILLSVGLYFRFGLRTPPMGAAPAAGATTTATP*
Ga0070699_10218852113300005518Corn, Switchgrass And Miscanthus RhizosphereMTSPNVAPQSSSDETLPPGRVVRWLLLGGVILLSVGLYFRFGLHTPPMENVPAGTATTSTP*
Ga0070697_10092166423300005536Corn, Switchgrass And Miscanthus RhizosphereMTDPKSSGSDEILPPGRIVRWLALGGVILLSVGLYFRFGLHTPPMGSAPAAGATTTATP*
Ga0070697_10093743623300005536Corn, Switchgrass And Miscanthus RhizosphereMTFPRSAPSDETLPPGRVVRWVLLAGVILFSVGLYFRFGVHTPPMGITPAGTDTTSTP*
Ga0066695_1013344023300005553SoilVRWLIFAGVILLSVGLYFRFGIHTPPMGAAPAGADTTSTP*
Ga0066693_1024504613300005566SoilMTNPQVPSDETLPPGRVVRWIALAGVILFAVTLYFRFGLQTPPLGTTPAADTTSTP*
Ga0066703_1018258623300005568SoilMTSPNSAPPSPASSDETLPPGRVVRWVLLAGVILFSVGLYFRFGLHTPPMGASPAGS
Ga0066705_1004888723300005569SoilMTHPKSSSSDDRLPPGRIVRWVMIAGVILLSVGLYFRFGLRTPPMGAAPAAGATTTATP*
Ga0066694_1052284313300005574SoilMTSPTSDDTLPPGRVVRWLIFAGVILLSVGLYFRFGIHTPPMGAAPAGADTTST
Ga0066651_1005082323300006031SoilMTLPQSQASDETVPPGRVVRWIFIAGVILFSVGLYFRYGLRTAPMGNAPAAGETTTATP*
Ga0066656_1035357013300006034SoilLSDETLPPGRVVRWILLGGVILLSVGLYFRFGLHTPPMGSTPAGTDTTSTP*
Ga0066656_1104076613300006034SoilMTNPKASGSDEILPPGRIVRWLALAGIILFSVGLYFRFGLHTPAMGSSPPAPPPTAGATTTDTP*
Ga0066652_10007551423300006046SoilMTSSHPKPAASDETLAAGRVVRWIALAGVILFSVALYFEFGLHTPPFGSAPGATTSSSP*
Ga0079222_1005026523300006755Agricultural SoilMTFPRSAPADETLPPGRIVRWLLLAGVILFSVGLYFRFGVHTPPMGATPAGTATTSTP*
Ga0066653_1021801723300006791SoilVRWLILAGVILLSVGLYFRFGIHTPPMGAAPAGADTTSTP*
Ga0066658_1042241823300006794SoilMTSPNSAPPSPSSSDETLPPGRVVRWVLLAGVILFSVGLYFRFGLHTPPMGASPTGSAETSTP*
Ga0066665_1003894723300006796SoilMTFPSSAPSDETLPPGRVVRWILLAAVILFSVGLYFRFGLHTPPMGSTPAGTDTTSTP*
Ga0075433_1021770223300006852Populus RhizosphereMTSPSSPPAQNPSASSEETLPPGRVVRWVVLAGMILFSVALYFRFGLHTPPMENVPAGTATTSTP*
Ga0075433_1025223123300006852Populus RhizosphereMTDPKSFGSDEILPPGRIVRWLALGGIILLSVGLYFRFGLHTPPMGNAPAAGATTTATP*
Ga0075425_10086145923300006854Populus RhizosphereMTDPKSFGSDETLPPGRIVRWLALGGIILLSVGLYFRFGLHTPPMGNAPAAGATTTATP*
Ga0075425_10179029923300006854Populus RhizosphereMTLPKSLSSDDTLPPGRIVRWVMIAGVILLSVGLYFRFGLRTPPMGAAPAAGATTTATP*
Ga0075434_10106645323300006871Populus RhizosphereMTDPKSFGSDETLPPGRIVRWLALGGIILFSVGLYFRFGLHTPPMGNAPAAGATTTATP*
Ga0075426_1011555723300006903Populus RhizosphereMTLPKSPSSDDRMPPGRIVRWVMIAGVILLSVGLYFRFGLRTPPMGAAPAAGATTTATP*
Ga0075426_1086629413300006903Populus RhizosphereMTFPRSAPSDETLPPGRVVRWVVLAGVILFAVGLYFRFGVHTPPMGATPAGTDTTSTP*
Ga0075436_10018785713300006914Populus RhizospherePPGRIVRWVMIAGVILLSVGLYFRFGLRTPPMGAAPAAGATTTATP*
Ga0075436_10029629923300006914Populus RhizosphereMTFPRPAPSDETLPPGRVVRWVLLAGVILFAVGLYFRFGVHTPPMGITPAGTDTTSTP*
Ga0075436_10125179723300006914Populus RhizosphereMTDPKSSGSDETLPPGRIVRWLALGGIILLSVGLYFRFGLHTPPMGNAPAAGATTTATP*
Ga0075435_10062690223300007076Populus RhizosphereMTDPKSFGSDEILPPGRIVRWLALGGVILLSVGLYFRFGLHTPPMGNAPAAGATTTATP*
Ga0075435_10140590013300007076Populus RhizospherePPGRVVRWVLLAGVILFAVGLYFRFGVHTPPMGITPAGTDTTSTP*
Ga0099793_1008078423300007258Vadose Zone SoilMTSPNAAPSPQPSSAETLPPGRVVRWVLLAGVILFSVGLYFRFGLHTPPMGASPTGSDTTATP*
Ga0099795_1050899313300007788Vadose Zone SoilGRVVRWVMLAGVILFSVGLYFRFGLHTPPMGSVPPGAAATSTP*
Ga0066710_10002556673300009012Grasslands SoilMTLPKSSSSDDALPAGRIVRWVLLAGVILLSVGLYFRFGLRTPPIGAAPAAGATTTATP
Ga0099827_1047764413300009090Vadose Zone SoilMTLPKSSASNDTLPPSRIVRWLFIAGVILFSVGLYFRFGLHTPPIESAPAADTTTAIP*
Ga0099792_1103468523300009143Vadose Zone SoilVRWLMLAGMILLSVGLYFRFGLHTPPMVNAPAGTATTSPP*
Ga0134109_1000671423300010320Grasslands SoilMTLPKSASSEETLPPGRVVRWILLAGVILFSVGLYFRFGLRTPPMGSTPTGGGTATTSTP
Ga0134084_1042195923300010322Grasslands SoilMTSPTSDDTLPPGRVVRWLIFAGVILLSVGLYFRFGIHTPPMGAAPAGADTTS
Ga0134086_1020077023300010323Grasslands SoilMTSPSSPLPPQHPSASSEETLPPGRVVRWVLLAGMILFSVALYFRFALHTPPMENVPAGTATT
Ga0134065_1026004513300010326Grasslands SoilMTSPTSDDTLPPGRVVRWLIFAGVILLSVGLYFRFGIHTPPMGAAPAGADTTSTP*
Ga0134111_1013104913300010329Grasslands SoilRWVLLAGMILFSVGLYFRFVLHTPPMENVPAGTATTSTP*
Ga0134080_1046904023300010333Grasslands SoilMTSPTSEDTLPPGRVVRWLIFAGVILLSVGLYFRFGIHTPPMGAAPAG
Ga0134080_1056882323300010333Grasslands SoilDTLPPGRVVRWLIFAGVILLSVGLYFRFGIHTPPMGAAPAGTDTTSTP*
Ga0134063_1020572223300010335Grasslands SoilMTLPKSSATDDTLSPGRIVRWLFIAGVILFSVGLYFRFGLHTPPIESAPAADTTTATP*
Ga0134122_1025551413300010400Terrestrial SoilMTSPSSPPSQNPSASSEEALPPGRVVRWVILAGMILFAVGLYFRFGLHTPPMENVPAGTATSTP*
Ga0134121_1083766523300010401Terrestrial SoilPRSAPSDETLPPGRVVRWVLLAGVILFAVGLYFRFGVHTPPMGITPAGTDTTSTP*
Ga0137388_1007224123300012189Vadose Zone SoilMTFPKAAPSDETLPPGRVVRWVLLAGVILFSVGLYFRFGLHTPPMGTTPAGTATTSTP*
Ga0137383_1004708423300012199Vadose Zone SoilMTFPRSAPSDETLPSGRVVRWIVLAGVILFSAGLYFRFGVHTPPMGVTPAGTDTTSTP*
Ga0137363_1035318223300012202Vadose Zone SoilMTAPSSPLPAQNPSATSEETLPPGRVVRWVLLAGMILFFVGLYFRFGLDTPPMENVPAGTATTSTP*
Ga0137399_1087621413300012203Vadose Zone SoilMTAPSSPLPAQNPSASSEETLPPGRVVRWVLLAGMILFFVGLYFRFGLDTPPMENVPAGTATTSTP*
Ga0137399_1094965523300012203Vadose Zone SoilRIVRWLLLAGVILFSVGLYFRFGLKVEPVGTAAPATTATP*
Ga0137374_1034802623300012204Vadose Zone SoilMPPGRVVRWILIAGAILFSVGLYFRFGLRTPPMGSTPAGTATTPIP*
Ga0137362_1000509263300012205Vadose Zone SoilMTAPSSPLPAQNPSATSEETLPPGRVVRWVLLAGMILLFVGLYFRFGLDTPPMENVPAGTATTSTP*
Ga0137376_1058728423300012208Vadose Zone SoilMTFPRSAPSDETLPSGRVVRWIVLAGVILFSAGLYFRFGVHTPPMGATPAGTDTTSTP*
Ga0137376_1075013413300012208Vadose Zone SoilPPGRVVRWVLLAGMILFSVGLYFRFALHTPPMENVPAGTATTSPP*
Ga0137377_1036697823300012211Vadose Zone SoilAPSDETLPSGRVVRWIVLAGVILFSAGLYFRFGVHTPPMGATPAGTDTTSTP*
Ga0137377_1085337623300012211Vadose Zone SoilPSSLSDETLPPGRVVRWILLGGVILLSVGLYFRFGLHTPPMENAPAGNATTSTP*
Ga0137387_1030890413300012349Vadose Zone SoilETLPPGRVVRWILLGGVILLSVGLYFRFGLHTPPMENAPAGSATTSTP*
Ga0137384_1037644723300012357Vadose Zone SoilMTSPSSPLPPQHPSASSEETLPPGRVVRWVLLAGMILFSVGLYFRFALHTPPMENVPAGTETTSTP*
Ga0137375_1011425223300012360Vadose Zone SoilMTFPKSTPSDETMPPGRVVRWILIAGAILFSVGLYFRFGLRTPPMGSTPAGTATTPIP*
Ga0137360_1121743623300012361Vadose Zone SoilMTFPSAPSDETLPSGRVVRWMLLAAVILFSVGLYFRFGLQTPPMGSAPAGTDTTSTP*
Ga0137360_1131262023300012361Vadose Zone SoilGRVVRWVLLAGAILFSVGLYFRFGLKTPPMGTTPAGTATTSTP*
Ga0137361_1004836723300012362Vadose Zone SoilMTFPSAPSDETLPSGRVVRWLLLAAVILFSVGLYFRFGLQTPPMGSAPAGTDTTSTP*
Ga0134031_103022113300012388Grasslands SoilQSQASDETVPPGRVVRWIFIAGIILFSVGLYFRYGLRTAPMGNAPAAGETTTATP*
Ga0134043_106263113300012392Grasslands SoilDTLPPGRVVRWLIFAGVILLSVGLYFRFGIHTPPMGAAPAGADTTSTP*
Ga0134050_135921013300012407Grasslands SoilSEDTLPPGRVVRWLIFAGVILLSVGLYFRFGIHTPPMGAAPAGADTTSTP*
Ga0137373_1117632113300012532Vadose Zone SoilFPRSAPSDETLPSGRVVRWIVLAGVILFSVGLYFRFGVHTPPMGVTPAGTDTTSTP*
Ga0137397_1007795313300012685Vadose Zone SoilRVVRWVLLAGVILFSVGLYFRFGLHTPPMGASPTGSATTSTP*
Ga0137397_1044790923300012685Vadose Zone SoilETLPPGRVVRWVLLAGVILFSVGLYFRFGLHTPPMGASPTDSATTSTP*
Ga0137397_1066968323300012685Vadose Zone SoilMTSPNAVPSPQPSSAETLPPGRVVRWVLLAGVILFSVGLYFRFGLHTPPMGASPT
Ga0137396_1062972323300012918Vadose Zone SoilMTSPNSPQSQPSSSDETLPPGRVVRWVLLAGIILFFVGLYFRFGLHTPPMGASPAGSADSSTP*
Ga0137396_1093232713300012918Vadose Zone SoilSDETLPPGRVVRWVLLAGVILFSVGLYFRFGLKTPPMGTTPAGTATTSTP*
Ga0137394_1008467023300012922Vadose Zone SoilMTSPNAPDVPRSSSSDETLPPGRVVRWLIFAGVILLSVGLYFRFGIHTPPMGVTPAGSDTTSTP*
Ga0137359_1027193213300012923Vadose Zone SoilMTAPSSPLPAQNPSATSEETLPPGRVVRWVLLAGMILLFVGLYFRFGLDTPPMENVTAGTATTSTP*
Ga0134078_1018036413300014157Grasslands SoilLLEYRPMTSPTSDDTLPPGRVVRWLIFAGVILLSVGLYFRFGIHTPPMGAAPAGADTTSTP*
Ga0137412_1021403523300015242Vadose Zone SoilMTSPNAPDVARSSSSDETLPPGRVVRWLIFAGVILLSVGLYFRFGIHTPPMGVAPAGSDTTSTP*
Ga0137403_1005416823300015264Vadose Zone SoilMTSSSSPPQTQGASDETLPPGRVVRWLIFAGVILLSVGLYFRFGIHTPPMVNAPAGSDTTSTP*
Ga0134089_1014315323300015358Grasslands SoilPPGRIVRWIFIAGVILFSVGLYFRFGLHTPPFGTAPAAGETTPATP*
Ga0134112_1008131123300017656Grasslands SoilMALPKSPASDETLPPGRIVRWIFIAGVILFSVGLYFRFGLHTPPFGTAPAAGETPPATP
Ga0134112_1011777323300017656Grasslands SoilMTSPSSPLPPQHPSASSEETLPPGRVVRWVLLAGMILFSVALYFRFALHTPPMENVPAGTAT
Ga0184618_1021396023300018071Groundwater SedimentMTSPNSPVLPASSDETLPPGRVVRWVLLAGVILFSVGLYFRFGLHTPPMGAAPTGSTETSTP
Ga0066667_1040190813300018433Grasslands SoilMTLPQSQASDETVPPGRVVRWIFIAGIILFSVGLYFRYGLRTAPMGNAPAAGETTTATP
Ga0066662_1001542323300018468Grasslands SoilMTLPKSSSSDDALPAGRIVRWVLLAGVILLSVGLYFRFGLRTPPMGAAPAAGATTTATP
Ga0066662_1269843213300018468Grasslands SoilYRPMTLPKSSATDDTLPPGRIVRWLFIAGVILFSVGLYFRFGLHTPPIESAPAADTTTAT
Ga0193723_102975323300019879SoilMTFPRSAPSEETLLPGRVVRWVMLAGMILFAVGLYFRFGVHTPPMGATPAGTDTTSTP
Ga0193725_102342123300019883SoilMTSPSSPPQTQGASDETLPPGRVVRWLMLAGVILLSVGLYFRFGLHTPPMVNAPAGTATTSPP
Ga0193711_100050263300019997SoilMTSTSPPRQTQGASDETLPPGRVVRWLMLAGVILLSVGLYFRFGLHTPPMVNAPAGTATTSPP
Ga0193755_101104213300020004SoilSPSSSSDETLPPGRVVRWVLLGGVILLSVGLYFRFGLHTPPMENAPAGSAATSTP
Ga0193755_101549723300020004SoilMTFPRSAPSEETLLPGRVVRWVMLAGMILFAVGLYFRFGVHTPPMGATTPAGTDTTSTP
Ga0193755_107509813300020004SoilVRWLMLAGVILLSVGLYFRFGLHTPPMVNAPAGTATTSPP
Ga0179594_1001776123300020170Vadose Zone SoilMTSPNSPDVPRSSSTDETLPPGRVVRWLMLAGMILLSVGLYFRFGLHTPPMVNAPAGTATTSPP
Ga0179596_1027517223300021086Vadose Zone SoilMTLPKSSSSADTLPPGRIVRWVMLAGVILLSVGLYFRFGLRTPPMGAAPAAGATTTATP
Ga0222625_176001813300022195Groundwater SedimentPNAPDVPQSSSSDETLPPGRVVRWLMLAGVILLSVGLYFRFGIHTPPMVNAPAGADTTST
Ga0224452_100039673300022534Groundwater SedimentMTSPNAPDVPQSSSSDETLPPGRVVRWLMLAGVILLSVGLYFRFGIHTPPMVNAPAGADTTSTP
Ga0207653_10000082573300025885Corn, Switchgrass And Miscanthus RhizosphereMTFPRSAPSDETLPPGRVVRWVLLAGVILFAVGLYFRFGVHTPPMGITPAGTDTTSTP
Ga0207646_1013042723300025922Corn, Switchgrass And Miscanthus RhizosphereMTLPKSSSSDETLPPGRIVRWVMIAGVILLSVGLYFRFGLRTPPMGAAPAAGATTTATP
Ga0209438_100402733300026285Grasslands SoilMTFPRSAPSDETLPSGRVVRWIVLAGVILFSVGLYFRFGVHTPPMGVTPAGTDTTSTP
Ga0209235_100655033300026296Grasslands SoilMTIPNSPSSDDTLPPGRVVRWVLLAGVILFSVGLYFRYGLRTPPMGAAPAAGVTTATP
Ga0209237_106687723300026297Grasslands SoilMTIPNSPSSDDTLPPGRVVRWVLLAGVILFSVGLYFRYGLRTPPMGAAPAAGVTTTATP
Ga0209236_101228823300026298Grasslands SoilMTFPKSAAQSSDETLPAGRVVRWVLLAGAILFSVGLYFRFGLKTPPMGTTPAGTATTSTP
Ga0209236_102908633300026298Grasslands SoilVRWVLLAGAILFSVGLYFRFGLKTPPMGTTPAGTATTSTP
Ga0209688_104920423300026305SoilMTNPQVPSDETLPPGRVVRWIALAGVILFAVTLYFRFGLQTPPLGTTPAADTTSTP
Ga0209468_117897913300026306SoilPMTSPTSDDTLPPGRVVRWLIFAGVILLSVGLYFRFGIHTPPMGAAPAGADTTSTP
Ga0209469_101714623300026307SoilMTSPTSDDTLPPGRVVRWLIFAGVILLSVGLYFRFGIHTPPMGAAPAGADTTSTP
Ga0209239_111634813300026310Grasslands SoilMTLPKSSSSDDALPAGRIVRWVLLAGVILLSVGLYFRFGLRTPPMGAAPAAG
Ga0209268_118845413300026314SoilMTSPTSEDTLPPGRVVRWLIFAGVILLSVGLYFRFGIHTPPMGAAPAGAD
Ga0209647_125400513300026319Grasslands SoilFPRSAPSDETLPSGRVVRWIVLAGVILFSVGLYFRFGVHTPPMGVTPAGTDTTSTP
Ga0209131_117384623300026320Grasslands SoilRVVRWVLLAGMILFFVGLYFRFGLDTPPMENVPAGTATTSTP
Ga0209472_109504123300026323SoilMTFPRSAPSDETLPSGRIVRWIVLAGVILFSAGLYFRFGVHTPPIGATPAGTDTTSTP
Ga0209470_107479623300026324SoilMTSPSSPLPPQHPSASSEETLPPGRVVRWVLLAGMILFSVGLYFRFALHTPPMENVPAGTATTSTP
Ga0209470_120817813300026324SoilMTLPQSQASDETVPPGRVVRWIFIAGIILFSVGLYFRYGLRTAPMGNAPAAGETTT
Ga0209266_108724623300026327SoilMTSPTSEDTLPPGRVVRWLIFAGVILLSVGLYFRFGIHTPPMGAAPAGADTTSTP
Ga0209266_112436723300026327SoilMTLPKSSATDDTLPPGRIVRWLFIAGVILFSVGLYFRFGLHTPPIESAPAADTTTATP
Ga0209266_129166613300026327SoilMTSPSSPLPPQHPSASSEETLPPGRVVRWVLLAGMILFSVALYFRFALHTPPMENVPAGTATTSTP
Ga0209690_108609413300026524SoilDDALPAGRIVRWVLLAGVILLSVGLYFRFGLRTPPMGAAPAAGATTTATP
Ga0209378_105309223300026528SoilMTFPSSAPSDETLPPGRVVRWILLAAVILFSVGLYFRFGLHTPPMGSTPAGTDTTSTP
Ga0209807_103029923300026530SoilMTHPKSSSSDDRLPPGRIVRWVMIAGVILLSVGLYFRFGLRTPPMGAAPAAGATTTATP
Ga0209058_101973153300026536SoilMTSPSSSSDETLPPGRVVRWVLLGGVILLSVGLYFRFGLHTPPMENAPAGSATTSPP
Ga0209058_102315043300026536SoilMALPKSPASDETLPPGRIVRWIFIAGVILFSVGLYFRFGLHTPPFGTAPAAGETTPATP
Ga0209814_1036163913300027873Populus RhizosphereMTDPKSFGSDEILPPGRIVRWLALGGVILLSVGLYFRFGLHTPPMGNAPAAGATTTATP
Ga0209488_1037959223300027903Vadose Zone SoilVRWLMLAGMILLSVGLYFRFGLHTPPMVNAPAGTATTSPP
Ga0307501_1000781123300031152SoilYRPMTFPRPAPSDETLPSGRVVRWIVLAGVILFSVGLYFRFGVHTPPMGVTPAGTDTTST
Ga0307469_1005752523300031720Hardwood Forest SoilMTLPKSSSSDDTLPPGRIVRWVMLAGVILLSVGLYFRFGLRTPPMGAAPAAGATTTATP
Ga0307469_1234767023300031720Hardwood Forest SoilMTDPKSSGSDEILPPGRIVRWLALGGVILLSVGLYFRFGLHTPPMGNAPAAGATTTATP

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.