Metagenome / Metatranscriptome Family F044353

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F044353
Family Type	Metagenome / Metatranscriptome
Number of Sequences	154
Average Sequence Length	53 residues
Representative Sequence	LAQICARVDYVNGLQENLKGQDAASEEVRAEFKALVEQCRTALRNRAEESD
Number of Associated Samples	108
Number of Associated Scaffolds	154

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.65 %
% of genes near scaffold ends (potentially truncated)	90.26 %
% of genes from short scaffolds (< 2000 bps)	92.86 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.66

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (91.558 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (22.727 % of family members)
Environment Ontology (ENVO)	Unclassified (36.364 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (64.286 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.16% β-sheet: 0.00% Coil/Unstructured: 46.84%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.66
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.66
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 154 Family Scaffolds
PF00378	ECH_1	18.83
PF03401	TctC	5.84
PF05721	PhyH	5.19
PF08818	DUF1801	3.90
PF00211	Guanylate_cyc	1.95
PF11159	DUF2939	1.95
PF02586	SRAP	1.30
PF00589	Phage_integrase	1.30
PF01381	HTH_3	1.30
PF01266	DAO	1.30
PF12844	HTH_19	0.65
PF13505	OMP_b-brl	0.65
PF02738	MoCoBD_1	0.65
PF14357	DUF4404	0.65
PF13384	HTH_23	0.65
PF00313	CSD	0.65
PF01315	Ald_Xan_dh_C	0.65
PF04392	ABC_sub_bind	0.65
PF01124	MAPEG	0.65
PF13191	AAA_16	0.65

COG ID	Name	Functional Category	% Frequency in 154 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	5.84
COG5285	Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family	Secondary metabolites biosynthesis, transport and catabolism [Q]	5.19
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	3.90
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	3.90
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	3.90
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	1.95
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	1.30
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.65

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.56 %
Unclassified	root	N/A	8.44 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.56 %
Unclassified	root	N/A	8.44 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.56 %
Unclassified	root	N/A	8.44 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	70.78 %
Unclassified	root	N/A	8.44 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	4.55 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	64.29 %
Unclassified	root	N/A	8.44 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	4.55 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	43.51 %
Unclassified	root	N/A	8.44 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.55 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	43.51 %
Unclassified	root	N/A	8.44 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.55 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.95 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.95 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	43.51 %
Unclassified	root	N/A	8.44 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.55 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	1.30 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.95 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	0.65 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	43.51 %
Unclassified	root	N/A	8.44 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.55 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	1.30 %
Bradyrhizobium uaiense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium uaiense	0.65 %
unclassified Hyphomicrobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium	0.65 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.65 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	43.51 %
Unclassified	root	N/A	8.44 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.55 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1.30 %
Hyphomicrobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp.	0.65 %
Bradyrhizobium sp. BRP22	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. BRP22	0.65 %
Bradyrhizobium uaiense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium uaiense	0.65 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000579\|AP72_2010_repI_A01DRAFT_1011259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1425	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1018417	All Organisms → cellular organisms → Bacteria → Proteobacteria	1115	Open in IMG/M
3300000956\|JGI10216J12902_100029917	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	970	Open in IMG/M
3300000956\|JGI10216J12902_100527281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	544	Open in IMG/M
3300002245\|JGIcombinedJ26739_100013099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6859	Open in IMG/M
3300002906\|JGI25614J43888_10097374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	782	Open in IMG/M
3300002910\|JGI25615J43890_1044040	Not Available	729	Open in IMG/M
3300004268\|Ga0066398_10149581	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300004629\|Ga0008092_11218771	All Organisms → cellular organisms → Bacteria → Proteobacteria	529	Open in IMG/M
3300004633\|Ga0066395_10038503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2046	Open in IMG/M
3300004633\|Ga0066395_10039210	All Organisms → cellular organisms → Bacteria → Proteobacteria	2031	Open in IMG/M
3300005172\|Ga0066683_10232643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1141	Open in IMG/M
3300005187\|Ga0066675_10552382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	864	Open in IMG/M
3300005332\|Ga0066388_101988433	All Organisms → cellular organisms → Bacteria	1041	Open in IMG/M
3300005332\|Ga0066388_103430849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	809	Open in IMG/M
3300005332\|Ga0066388_108231798	Not Available	520	Open in IMG/M
3300005332\|Ga0066388_108633638	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	507	Open in IMG/M
3300005363\|Ga0008090_10011778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	519	Open in IMG/M
3300005445\|Ga0070708_100763777	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp.	909	Open in IMG/M
3300005445\|Ga0070708_101227345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	701	Open in IMG/M
3300005454\|Ga0066687_10681175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	611	Open in IMG/M
3300005467\|Ga0070706_100220698	All Organisms → cellular organisms → Bacteria → Proteobacteria	1769	Open in IMG/M
3300005471\|Ga0070698_101108388	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	740	Open in IMG/M
3300005536\|Ga0070697_100341210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1293	Open in IMG/M
3300005546\|Ga0070696_101357858	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	605	Open in IMG/M
3300005555\|Ga0066692_10478250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	794	Open in IMG/M
3300005557\|Ga0066704_10681113	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	650	Open in IMG/M
3300005568\|Ga0066703_10611635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	634	Open in IMG/M
3300005576\|Ga0066708_10506537	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	778	Open in IMG/M
3300005713\|Ga0066905_100779647	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300005713\|Ga0066905_100952295	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300005713\|Ga0066905_101595998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	597	Open in IMG/M
3300005764\|Ga0066903_100820685	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1667	Open in IMG/M
3300005764\|Ga0066903_101097767	All Organisms → cellular organisms → Bacteria → Proteobacteria	1466	Open in IMG/M
3300005764\|Ga0066903_101835143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. BRP22	1159	Open in IMG/M
3300005764\|Ga0066903_104560152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	738	Open in IMG/M
3300005764\|Ga0066903_105024779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	701	Open in IMG/M
3300005764\|Ga0066903_105657851	All Organisms → cellular organisms → Bacteria → Proteobacteria	657	Open in IMG/M
3300005764\|Ga0066903_106631021	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	602	Open in IMG/M
3300005764\|Ga0066903_107581381	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	559	Open in IMG/M
3300005764\|Ga0066903_107676236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	555	Open in IMG/M
3300006050\|Ga0075028_100674095	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	620	Open in IMG/M
3300006806\|Ga0079220_11417403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	590	Open in IMG/M
3300009038\|Ga0099829_11505152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	556	Open in IMG/M
3300009137\|Ga0066709_101908314	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	826	Open in IMG/M
3300009147\|Ga0114129_13267698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	525	Open in IMG/M
3300010043\|Ga0126380_10654758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	837	Open in IMG/M
3300010046\|Ga0126384_10368279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1203	Open in IMG/M
3300010046\|Ga0126384_10518263	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1031	Open in IMG/M
3300010046\|Ga0126384_11225847	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300010046\|Ga0126384_11670836	Not Available	601	Open in IMG/M
3300010048\|Ga0126373_10343264	All Organisms → cellular organisms → Bacteria	1503	Open in IMG/M
3300010358\|Ga0126370_10876690	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300010360\|Ga0126372_11097782	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300010360\|Ga0126372_12329253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	586	Open in IMG/M
3300010361\|Ga0126378_11198682	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300010366\|Ga0126379_11483904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	784	Open in IMG/M
3300010366\|Ga0126379_11809821	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	715	Open in IMG/M
3300010366\|Ga0126379_13709648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	512	Open in IMG/M
3300010376\|Ga0126381_100857397	All Organisms → cellular organisms → Bacteria	1306	Open in IMG/M
3300010397\|Ga0134124_11844187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	639	Open in IMG/M
3300010398\|Ga0126383_10172808	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2043	Open in IMG/M
3300010398\|Ga0126383_10934720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	954	Open in IMG/M
3300010398\|Ga0126383_11575788	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300010398\|Ga0126383_12128957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	648	Open in IMG/M
3300010398\|Ga0126383_12420657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	610	Open in IMG/M
3300010398\|Ga0126383_12706104	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	579	Open in IMG/M
3300010398\|Ga0126383_12728956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	576	Open in IMG/M
3300010398\|Ga0126383_12873208	Not Available	563	Open in IMG/M
3300010398\|Ga0126383_13102475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	543	Open in IMG/M
3300012200\|Ga0137382_10141893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1622	Open in IMG/M
3300012201\|Ga0137365_11343935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	505	Open in IMG/M
3300012202\|Ga0137363_11727390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	518	Open in IMG/M
3300012205\|Ga0137362_10113755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2289	Open in IMG/M
3300012206\|Ga0137380_10847359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	787	Open in IMG/M
3300012355\|Ga0137369_10849077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	618	Open in IMG/M
3300012917\|Ga0137395_10906436	Not Available	637	Open in IMG/M
3300012923\|Ga0137359_10632497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	937	Open in IMG/M
3300012930\|Ga0137407_11541812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	632	Open in IMG/M
3300012971\|Ga0126369_11674679	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300012971\|Ga0126369_13488058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	515	Open in IMG/M
3300015373\|Ga0132257_104226722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	522	Open in IMG/M
3300016270\|Ga0182036_10527278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	939	Open in IMG/M
3300016270\|Ga0182036_10744040	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	796	Open in IMG/M
3300016294\|Ga0182041_10136614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1868	Open in IMG/M
3300016294\|Ga0182041_10320752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1292	Open in IMG/M
3300016294\|Ga0182041_10447109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1110	Open in IMG/M
3300016294\|Ga0182041_11978512	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300016319\|Ga0182033_11022417	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300016341\|Ga0182035_10726422	Not Available	867	Open in IMG/M
3300016387\|Ga0182040_10366537	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1121	Open in IMG/M
3300016422\|Ga0182039_11202642	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	685	Open in IMG/M
3300016445\|Ga0182038_10109211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2029	Open in IMG/M
3300018431\|Ga0066655_10277094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1084	Open in IMG/M
3300018468\|Ga0066662_10937555	Not Available	853	Open in IMG/M
3300021168\|Ga0210406_11256091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	536	Open in IMG/M
3300021560\|Ga0126371_11243070	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
3300021560\|Ga0126371_12935045	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	578	Open in IMG/M
3300025885\|Ga0207653_10319804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	603	Open in IMG/M
3300025910\|Ga0207684_10209495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1682	Open in IMG/M
3300025928\|Ga0207700_10868893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	807	Open in IMG/M
3300026327\|Ga0209266_1301512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	504	Open in IMG/M
3300026351\|Ga0257170_1037673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	661	Open in IMG/M
3300026524\|Ga0209690_1125639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1001	Open in IMG/M
3300026552\|Ga0209577_10377730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1032	Open in IMG/M
3300027603\|Ga0209331_1062835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium uaiense	930	Open in IMG/M
3300027654\|Ga0209799_1026678	Not Available	1276	Open in IMG/M
3300027846\|Ga0209180_10595483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	611	Open in IMG/M
3300028878\|Ga0307278_10143677	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1070	Open in IMG/M
3300028878\|Ga0307278_10331513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	671	Open in IMG/M
3300028885\|Ga0307304_10280646	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	732	Open in IMG/M
3300031544\|Ga0318534_10473512	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300031545\|Ga0318541_10264145	All Organisms → cellular organisms → Bacteria → Proteobacteria	957	Open in IMG/M
3300031564\|Ga0318573_10229531	All Organisms → cellular organisms → Bacteria → Proteobacteria	988	Open in IMG/M
3300031573\|Ga0310915_10577215	Not Available	797	Open in IMG/M
3300031668\|Ga0318542_10710803	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300031681\|Ga0318572_10619972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	644	Open in IMG/M
3300031719\|Ga0306917_10362320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1128	Open in IMG/M
3300031747\|Ga0318502_10316624	All Organisms → cellular organisms → Bacteria	919	Open in IMG/M
3300031747\|Ga0318502_10547273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	695	Open in IMG/M
3300031764\|Ga0318535_10210286	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	870	Open in IMG/M
3300031768\|Ga0318509_10139796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1331	Open in IMG/M
3300031768\|Ga0318509_10266940	All Organisms → cellular organisms → Bacteria	956	Open in IMG/M
3300031777\|Ga0318543_10495360	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300031779\|Ga0318566_10051501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1956	Open in IMG/M
3300031798\|Ga0318523_10086009	All Organisms → cellular organisms → Bacteria → Proteobacteria	1528	Open in IMG/M
3300031805\|Ga0318497_10051975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2114	Open in IMG/M
3300031833\|Ga0310917_10500534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	826	Open in IMG/M
3300031879\|Ga0306919_10502688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	934	Open in IMG/M
3300031890\|Ga0306925_10522818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1261	Open in IMG/M
3300031890\|Ga0306925_10645888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1113	Open in IMG/M
3300031893\|Ga0318536_10515435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	601	Open in IMG/M
3300031894\|Ga0318522_10424181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	504	Open in IMG/M
3300031896\|Ga0318551_10846495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	533	Open in IMG/M
3300031896\|Ga0318551_10882604	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300031897\|Ga0318520_11033599	All Organisms → cellular organisms → Bacteria → Proteobacteria	519	Open in IMG/M
3300031945\|Ga0310913_10720323	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	705	Open in IMG/M
3300032010\|Ga0318569_10159637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1040	Open in IMG/M
3300032042\|Ga0318545_10244886	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300032052\|Ga0318506_10557369	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300032060\|Ga0318505_10298553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	760	Open in IMG/M
3300032060\|Ga0318505_10322463	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	729	Open in IMG/M
3300032065\|Ga0318513_10391115	Not Available	678	Open in IMG/M
3300032066\|Ga0318514_10133329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1280	Open in IMG/M
3300032066\|Ga0318514_10623361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	574	Open in IMG/M
3300032076\|Ga0306924_11927869	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	611	Open in IMG/M
3300032089\|Ga0318525_10682947	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300032094\|Ga0318540_10371828	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300032261\|Ga0306920_100190284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3062	Open in IMG/M
3300032261\|Ga0306920_103306447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	601	Open in IMG/M
3300032261\|Ga0306920_103554683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	575	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.70%
Host-Associated	Host-Associated	1.30%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.05%
Plants	Host-Associated → Plants	1.30%
Aquatic	Environmental → Aquatic	0.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.05%
Sediment	Environmental → Aquatic → Sediment	0.65%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	76.62%
Loam	Environmental → Terrestrial → Soil → Loam	21.43%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	36.36%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.27%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.58%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.04%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.84%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.30%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.65%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.73%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	17.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.34%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	12.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.79%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.14%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.84%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.25%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.95%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.30%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	1.30%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.65%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.65%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.65%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.65%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000579	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A01	Environmental	Open in IMG/M
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300002910	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004629	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome P72I A01 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026351	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-05-B	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027603	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AP72_2010_repI_A01DRAFT_10112593	3300000579	Forest Soil	MSPLLAQSGPSASSPLAQICARVDCVNGLQENLKGQEAASEEVRAEFKALVEQCRTALRNLADETD*
AF_2010_repII_A01DRAFT_10184171	3300000580	Forest Soil	NRLAQICARVDYVNSLQENLKGPDAASEQVESELKALVEQCRTALRDSAEEND*
JGI10216J12902_1000299171	3300000956	Soil	LAQICARVDYVNGLQENLKGGQDAASDEVGVELKALVEQCRTALRNRAEEND*
JGI10216J12902_1005272811	3300000956	Soil	LAQICARVDYVNGLQENLKGQDAASEEVRAEFKALVEQCRTALRNRAEESD*
JGIcombinedJ26739_1000130996	3300002245	Forest Soil	RLQENLEGQAAASEEVRAEFKALVEQCRAALRDRAEEND*
JGI25614J43888_100973741	3300002906	Grasslands Soil	TPLAQICARVDYVNSLQENLKGQDAASEDMRGELKRLVEQCRTALRDRAEESD*
JGI25615J43890_10440402	3300002910	Grasslands Soil	FLAGWWSSARDTNLLAQICARVDYVNGLQENLKGGQDAASDEVGXELKALVEQCRTALRNRAEEND*
Ga0066398_101495811	3300004268	Tropical Forest Soil	LAQICARVDYVNGLQENLKGQDPATEEVSVGLKALVEQCRAALRDRAEEND*
Ga0008092_112187712	3300004629	Tropical Rainforest Soil	HARDTGRLAQICARVDYVNSLQENLKGPDAASEQVGSELKALVEQCRTALRDSAEEND*
Ga0066395_100385034	3300004633	Tropical Forest Soil	VDGLQETLKDSASEEMRIEIKALVEQCGTALRNRADEND*
Ga0066395_100392103	3300004633	Tropical Forest Soil	QICARVDYVNGLQENLKGQDPASEEVNVGLKALVEQCRAALRDRAEEND*
Ga0066683_102326431	3300005172	Soil	PLAQICARVDYVNGLQENLKGGQDAASDEVGVELKALVEQCRTALRNRAEEND*
Ga0066675_105523822	3300005187	Soil	VDYVSSLQEHLKDDASEEMRTELNTLVEQCRTALRDRAEEND*
Ga0066388_1019884332	3300005332	Tropical Forest Soil	AQICARVDYVNSLQENLKGPDAASEDVRGELKRLVEQCRTALRDRAEEND*
Ga0066388_1034308491	3300005332	Tropical Forest Soil	GYLLAGLWSSARDTSPLAQICARVDYVDGLQETLKDSASVEVQTEIKALVEQCRTALRDRADEND*
Ga0066388_1082317981	3300005332	Tropical Forest Soil	WWSSARDTNLLAQICARVDYVNGLQENLKGGQDAASDEVGVELKALVEQCRTALRNRAEEND*
Ga0066388_1086336381	3300005332	Tropical Forest Soil	VDYVNGLQENLKGQEAASEEVRAEFKALVEQCRTALRNRADEND*
Ga0008090_100117781	3300005363	Tropical Rainforest Soil	VDSMNGLQESLKGPDAVSDEVGVELKALVEQCRTALRNRAEEND*
Ga0070708_1007637771	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	AQICARVDYVNGLQENLKGQEAASEEVRAEFKALVEQCRTALRDSG*
Ga0070708_1012273452	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	LAQICARVDYVNSLHENLKGQDTASEDVRGELKRLVEQCRTALRDRAEEND*
Ga0066687_106811751	3300005454	Soil	ICARVDYVNSLQENLKGQDAASEDVRLELKRLVEQCRTALRDRAEESD*
Ga0070706_1002206982	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MLGICARVDYVNSLQENLKGAVSEEVQSELKTLVEQCRTALRDRADEND*
Ga0070698_1011083881	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	GYFLAGLWSSARNTSPLAQICARVDYVNGLQENLKGQEAASEEVRAEFKALVEQCRTALRDSG*
Ga0070697_1003412102	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MNPLASICDRVDYVNSLQENLKGQDAAGEEVRAEFKMLVERCSTALRDRADTSGER*
Ga0070696_1013578582	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	GLWSNGRDTSPLAQICARVDYVSSLQENLKNDASEEMRTELNTLVEQCRTALRDRAEEND
Ga0066692_104782501	3300005555	Soil	LAVWWSSARDTNLLAQICARVDYVNGLQENLKGGQDAASDEVGVELKALVEQCRTALRNRAEEND*
Ga0066704_106811133	3300005557	Soil	YVSSLQDNLKGQDAASEDVRLELKRLVEQCRTALRDRAEESD*
Ga0066703_106116352	3300005568	Soil	LLAGWWSRSRDTTPLAQICARIDYVSSLQDNLKGQDAASEDVRLELKRLVEQCRTALRDRAEESD*
Ga0066708_105065371	3300005576	Soil	VDYVSSLQDNLKGQDAASEDVRLELKRLVEQCRTALRDRAEESD*
Ga0066905_1007796471	3300005713	Tropical Forest Soil	NLKGQDPASEEVSVGLKALVEQCRAALRDRAEEND*
Ga0066905_1009522951	3300005713	Tropical Forest Soil	SLWSSARDTSPLAQICARVDYVNGLQENLKGQDPASEEVNVGLKALVEQCRAALRDRAEEND*
Ga0066905_1015959982	3300005713	Tropical Forest Soil	DYVSSLQDNLKDAASEEMRSELNTLVEQCRTALRDRAEEND*
Ga0066903_1008206851	3300005764	Tropical Forest Soil	ICARVDYVNGLQETLKDSASVEVQTEIKELVEQCRAALRNCADEND*
Ga0066903_1010977672	3300005764	Tropical Forest Soil	SWWHARDTGRLAQICARVDYVNSLQENLKGPDAASEQVGSELKALVEQCRTALRDSAEEND*
Ga0066903_1018351431	3300005764	Tropical Forest Soil	TSPLAQICARVDYVDGLQETLKDSASEEMRIEIKALVEQCRTALRNRADEND*
Ga0066903_1045601522	3300005764	Tropical Forest Soil	VDGLQKTLKNSASVEVQTEIKALVEQCRTALRNRADEND*
Ga0066903_1050247792	3300005764	Tropical Forest Soil	YLLAGLWSSARDTSPLAQICARVDYVDGLQETLKDSASEEMRIEIKALVEQCRTALRDRAEEKD*
Ga0066903_1056578511	3300005764	Tropical Forest Soil	GSWWHARDTGRLAQICARVDYVNSLQENLKGPDAASEQVESELKALVEQCRTALRDSAEEND*
Ga0066903_1066310212	3300005764	Tropical Forest Soil	WSSARDTSPLAQICARVDYVNGLQENLKGQDPASEEVSVGLKALVEQCRAALRDRAEEND
Ga0066903_1075813811	3300005764	Tropical Forest Soil	LLADWWPKPPDPRALAQICARVDYINSLQENLRGQEAASEDVRTEFKALVEQCRAAL*
Ga0066903_1076762362	3300005764	Tropical Forest Soil	CARVDYINSLQENLRGQEAASEDVRTEFKALVEQCRAALRDRAEEND*
Ga0075028_1006740951	3300006050	Watersheds	ARVDYVNSLQENLHGQLAGDEVGAELKALVEQCRTALRNRADEND*
Ga0079220_114174031	3300006806	Agricultural Soil	LAGLWSSARDTSPLAQICARVDYVNGLQENLKGQEAASEEVRAEFNALVEQCRTALRNRADEND*
Ga0099829_115051522	3300009038	Vadose Zone Soil	ARDTSPLAQICARVDYVNSLQENLHGQLAGDEVGAELKALVEQCRTALRNRADEND*
Ga0066709_1019083143	3300009137	Grasslands Soil	ARVDYVSSLQDNLKGQDAASEDVRLELKRLVEQCRTALRDRAEESD*
Ga0114129_132676982	3300009147	Populus Rhizosphere	VDYLNGLQENLKGGQDAASDEVGVELKALVEQCRTALRNRADEND*
Ga0126380_106547581	3300010043	Tropical Forest Soil	VNGLQENLKGQEAASEEVRAEFKALVEQCRTALRNLADETD
Ga0126384_103682793	3300010046	Tropical Forest Soil	GLWSSARDTSPLAQICARVDSMNGLQESLKGPDAVSDEVGVKLKALVEQCRTALRNRADEND*
Ga0126384_105182631	3300010046	Tropical Forest Soil	LGSWWHARDTGRLAQICARVDYVNSLQENLKGPDAASEQVESELKALVEQCRTALRDSAEEND*
Ga0126384_112258471	3300010046	Tropical Forest Soil	VVASLWSSARDTSPLAQICARVDYVNGLQENLKGQDPASEEVNVGLKALVEQCRAALRDRAEEND*
Ga0126384_116708361	3300010046	Tropical Forest Soil	DYINSMQENLRGQAAASEEVQSEFKALVEQCRTALRDRAEEND*
Ga0126373_103432643	3300010048	Tropical Forest Soil	LWSSARDTSPLAQICARVDYVNGLQENLKGQDPATEEVSVGLKALVEQCRAALRDRAEEND*
Ga0126370_108766902	3300010358	Tropical Forest Soil	GYVVASLWSSARDTSPLAQICARVDYVNGLQENLKGQDPASEEVNVGLKALVEQCRAALRDRAEEND*
Ga0126372_110977821	3300010360	Tropical Forest Soil	VASLWSSARDTSPLAQICARVDYVNGLQENLKGQDPATEEVSVGLKALVEQCRAALRDRAEEND*
Ga0126372_123292532	3300010360	Tropical Forest Soil	VDYVNGLQESPPGQAAASEEVRTEFKALVEQCRTALRNRAEEND*
Ga0126378_111986821	3300010361	Tropical Forest Soil	LKGQDPATEEVSVGLKALVEQCRAALRDRAEEND*
Ga0126379_114839041	3300010366	Tropical Forest Soil	MSPLLAQSGPSASPLAQICARVDCVNGLQENLKGQEAASEEVRAEFKALVEQCRTALRNLADETD*
Ga0126379_118098212	3300010366	Tropical Forest Soil	GLQETLKDSASVEVQTEIKELVEQCRAALRNRADEND*
Ga0126379_137096481	3300010366	Tropical Forest Soil	RDTSPLAQICARVDYVNGLQENLKGQEAASEEVRAEFKALVEQCRTALRDRAEEND*
Ga0126381_1008573972	3300010376	Tropical Forest Soil	DTSPLAQICARVDYVNGLQENLKGQDPASEEVSVGLKALVEQCRAALRDRAEEND*
Ga0134124_118441872	3300010397	Terrestrial Soil	VDYVSSLQENLKNDASEEMRTELNTLVEQCRTALRDRAEEND*
Ga0126383_101728083	3300010398	Tropical Forest Soil	ASLWSSARDTSPLAQICARVDYVNGLQENLKGQDPASEEVNVGLKALVEQCRAALRDRAEEND*
Ga0126383_109347202	3300010398	Tropical Forest Soil	TSPLAQICARVDYVNGLQENLKGQDPATEEVSVGLKGLVEQCRTALRNLAEEND*
Ga0126383_115757881	3300010398	Tropical Forest Soil	RDTSPLAQICARVDSMNGLQESLKGPDAVSDEVGIELKALVEQCRTALRNRAEEND*
Ga0126383_121289571	3300010398	Tropical Forest Soil	LGSWWHARDSNRLAQICARVDYVNSLQENFKGPDAASEQVESELKALVEQCRTALRDSAEEND*
Ga0126383_124206571	3300010398	Tropical Forest Soil	LAQICARVDYVDGLQETLKDSASEEMRIEIKALVEQCRTALRDRAEEKD*
Ga0126383_127061041	3300010398	Tropical Forest Soil	VNGLQETLKDSASVEVQTEIKELVEQCRAALRNRTDEND*
Ga0126383_127289561	3300010398	Tropical Forest Soil	TSPLAQICARVDSMNGLQESLKGPDAVSDEVGVELKALVEQCRTALRNRAEEND*
Ga0126383_128732082	3300010398	Tropical Forest Soil	DYVDGLQETLKDSASEEMRIEIKALVEQCGTALRNRADEND*
Ga0126383_131024751	3300010398	Tropical Forest Soil	QICARVDYVNGLQENLKGQDPASEEVSVGLKALVEQCRAALRDRAEEND*
Ga0137382_101418931	3300012200	Vadose Zone Soil	GLFWSSTRDTLTQICARVDYVKHLKEQASEEVQAEFKALVEQCRTALRGSR*
Ga0137365_113439351	3300012201	Vadose Zone Soil	AQICARVDYVSSLQDNLKGQDAASEDVRLELKRLVEQCRTALRDRAEESD*
Ga0137363_117273901	3300012202	Vadose Zone Soil	SARDTNLLAQICARVDYVNGLQENLKGGQDAASDEVGVELKALVEQCRTALRNRAEEND*
Ga0137362_101137553	3300012205	Vadose Zone Soil	VNGLQENLKGQDAPSEEVRAEFKALVEQCRTALRNRAEEND*
Ga0137380_108473592	3300012206	Vadose Zone Soil	WSRARDTTPLAQICARVDYVNSLQENLKGQDAASEDVRVELKRLVEQCRTALRDRAEESD
Ga0137369_108490771	3300012355	Vadose Zone Soil	VFLQLAQICARVDYVNSLQENLKGQDAATEKVRAEFEALVEPCRTALRDRAEEND*
Ga0137395_109064361	3300012917	Vadose Zone Soil	DYVNGLQENLKGGQDAASDEVGAELKALVEQCRTALRNRAEEND*
Ga0137359_106324971	3300012923	Vadose Zone Soil	LGGLAQICARVDYVNSLQEHLKDAASEEVHAELKALVEQCRTALRDHADEND*
Ga0137407_115418121	3300012930	Vadose Zone Soil	SPLAQICARVDYVNGLQENLKGGQDAASDEVGVELKALVEQCRTALRNRAEEND*
Ga0126369_116746792	3300012971	Tropical Forest Soil	DTSPLAQICARVDYVNGLQENLKGQDPASEEVNVGLKALVEQCRAALRDRAEEND*
Ga0126369_134880582	3300012971	Tropical Forest Soil	GYFLGSWWHARDTGRLAQICARVDYVNSLQENLKGPDAASEQVESELKALVEQCRTALRDSAEEND*
Ga0132257_1042267221	3300015373	Arabidopsis Rhizosphere	LAQICARVDYVNGLQESLKGQDPASEEVGVGLKALVEQCRTALRDRAEEND*
Ga0182036_105272781	3300016270	Soil	DTSPLAQICARVDYVDGLQETLKDSASEEARTEIKALVEQCRAALRNRAEEND
Ga0182036_107440401	3300016270	Soil	RDTSPLAQICARVDYVDGLQETLKDSASEEMRIEIKALVEQCRTALRDCAEEKD
Ga0182041_101366142	3300016294	Soil	LGSWWHARDTGRLAQICARVDYVNSLQENLKEPDAASEQVGSELRALVEQCRTALRDSAEEND
Ga0182041_103207523	3300016294	Soil	FLAGWWSSARDTNLLAQICARVDYVNGLQENLKGGQDAASDEVGGELKALVEQCRTALRNRAEEND
Ga0182041_104471095	3300016294	Soil	RDTSPLAQICARVDYVDGLQETLKDSASVEVQTEIKALVEQCRTALRNRADEND
Ga0182041_119785122	3300016294	Soil	AGLWSSARDTSPLAQICARVDYVNGLQENLKGQDPATEEVSVGLKALVEQCRAALRDRAEEND
Ga0182033_110224171	3300016319	Soil	RDTSPLAQICARVDYVNGLQENLKGQDPATEEVSVGLKALVEQCRAALRDRAEEND
Ga0182035_107264223	3300016341	Soil	WWSSARDTNLLAQICARVDYVNGLQENLKGGQDAAGDEVGVELKALVEQCRTALRNRAEEND
Ga0182040_103665374	3300016387	Soil	ARVDHVDSLQENLTGQEAASEEARAEFKTLVEKCRAALEEPD
Ga0182039_112026421	3300016422	Soil	DGLQETLKDSASVEVQTEIKALVEQCRTALRNRADEND
Ga0182038_101092111	3300016445	Soil	NLLAQICARVDYVNGLQENLKGGQDAASDEVGTELKALVEQCRTALRNRAEEND
Ga0066655_102770943	3300018431	Grasslands Soil	AQICARVDYVSSLQEHPKDDASEEMRTELNTLVEQCRTALRDRAEEND
Ga0066662_109375551	3300018468	Grasslands Soil	GLQESLKGQDPASEEVGVGLKALVEQCRTALRDRAEEND
Ga0210406_112560912	3300021168	Soil	WLVCGRAHAIQVPLAQICARVDYVNGLQENLKGQEAASEEVRAEFNALVEQCRTALRNRADEND
Ga0210408_110891451	3300021178	Soil	LQENLEGQQAASEEVRSEFKALVEQCRVALEDRTKEYG
Ga0126371_112430701	3300021560	Tropical Forest Soil	AQICARVDYVNGLQENLKGQDPASEEVSVGLKALVEQCRAALRDRAEEND
Ga0126371_129350451	3300021560	Tropical Forest Soil	QETLKDSASVEVQTEIKELVEQCRAALRNRADEND
Ga0207653_103198041	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	WWSSARDTNLLAQICARVDYVNGLQENLKGGQDAASDEVGVELKALVEQCRTALRNRAEEND
Ga0207684_102094951	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MLGICARVDYVNSLQENLKGAVSEEVQSELKTLVEQCRTALRDRADEND
Ga0207700_108688932	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	AQICARVDYVNGLQENLKGGQDAASDEVGVELKALVEQCRTALRNRAEEND
Ga0209266_13015122	3300026327	Soil	DYVNGLQENLKGGQDAASDEVGVELKALVEQCRTALRNRAEEND
Ga0257170_10376732	3300026351	Soil	SLQENLKGQDAASEDMRGELKRLVEQCRTALRDRAEESD
Ga0209690_11256391	3300026524	Soil	LAQICARVDYVNGLQENLKGGQDAASDEVGVELKALVEQCRTALRNRAEEND
Ga0209577_103777302	3300026552	Soil	ICARVDYVNGLQENLKGGQDAASDEVGVELKALVEQCRTALRNRAEEND
Ga0209331_10311982	3300027603	Forest Soil	VQRRGRYVNSLQENLEGQQAASEEVRSEFKALVEQCRVALEDRTKEYGD
Ga0209331_10628352	3300027603	Forest Soil	APKTRDRSPIAQICARVDYVNSLQENLQGQEAASEEVRAEFKALLEQCRIALKERGEEND
Ga0209799_10266781	3300027654	Tropical Forest Soil	DCVNGLQENLKGQEAASEEVRAEFKALVEQCRTALRNLADETD
Ga0209180_105954831	3300027846	Vadose Zone Soil	ARDTSPLAQICARVDYVNSLQENLHGQLAGDEVGAELKALVEQCRTALRNRADEND
Ga0209526_100619196	3300028047	Forest Soil	VNSLQENLEGQQAASEEVRSEFKALVEQCRAALQDQTKEYGD
Ga0307278_101436771	3300028878	Soil	AGLWASSRDTSPLAQICARVDYVNSLQENLKGQDAASDEVRGEFKTLVEQCRTALRNRAEEND
Ga0307278_103315131	3300028878	Soil	LAGLWSSARDTSPLAQICARVDYVNGLHENLKGQEAASEEVRDEFKALVEQCCTALRNRADENDLANGN
Ga0307304_102806461	3300028885	Soil	AGLWSNGRDTSPLAQICARVDYVSSLQENLKDDASEEMRTELNTLVEQCRTALRDRAEEN
Ga0318534_104735121	3300031544	Soil	SSARDTSPLAQICARVDYVNGLQENLKGQDPATEEVSVGLKALVEQCRAALRDRAEEND
Ga0318541_102641451	3300031545	Soil	LAQICARVDYVNSLQENLKEPDAASEQVGSELRALVEQCRTALRDSAEEND
Ga0318573_102295311	3300031564	Soil	ENLKEPDAASEQVGSELRALVEQCRTALRDSAEEND
Ga0310915_105772151	3300031573	Soil	NGLQENLKGQEAASEEVRAEFNALVEQCRTALRDRAEEND
Ga0318542_107108031	3300031668	Soil	YVNGLQENLKGQDPATEEVSVGLKALVEQCRAALRDRAEENE
Ga0318572_106199721	3300031681	Soil	CARVDYVDGLQETLKDSASEEMRIEIKALVEQCRTALRDRAEEKD
Ga0306917_103623203	3300031719	Soil	SLQENLHGQLAGDEVGAELKALVEQCRTALRNRADEND
Ga0318502_103166241	3300031747	Soil	NLKGQDPATEEVSVGLKALVEQCRAALRDRAEEND
Ga0318502_105472732	3300031747	Soil	FLAGLWSSARDTSPFAQICARVDYVNSLQENLHGQLAGDEVGAELKALVEQCRTALRNRADEND
Ga0318535_102102861	3300031764	Soil	LLAGLWSSARDTSPLAQICARVDYVDGLQETLKDSASVEAQTEIKALVEQCRTALRNRADEND
Ga0318509_101397965	3300031768	Soil	SARDTSPLAQICARVDYVDGLQETLKDSASVEVQTEIKALVEQCRTALRNRADEND
Ga0318509_102669401	3300031768	Soil	SARDTSPLAQICARVDYVNGLQENLKGQDPATEEVSVGLKALVEQCRAALRDRAEEND
Ga0318543_104953601	3300031777	Soil	GLQENLKGQDPATEEVSVGLKALVEQCRAALRDRAEEND
Ga0318566_100515011	3300031779	Soil	AQICARVDYVNGLQENLKGQDPATEEVSVGLKALVEQCRAALRDRAEEND
Ga0318523_100860091	3300031798	Soil	TSPLAQICARVDYVDGLQETLKDSASVEAQTEIKALVEQCRTALRNRADEND
Ga0318497_100519751	3300031805	Soil	TSPLAQICARVDYVNGLQENLKGQDPATEEVSVGLKALVEQCRAALRDRAEEND
Ga0310917_105005342	3300031833	Soil	LLAGLWSSARDTSPLAQICARVDYVDGLQETLKDSASEEMRIEIKALVEQCRTALRDRAEEKD
Ga0306919_105026882	3300031879	Soil	LLAQICARVDYVNGLKENLKGGQDAASDEVGGELKALVEQCRTALRNRAEEND
Ga0306925_105228181	3300031890	Soil	GLWSSTRDTSPLAQICARVDYVDGLQETLKDSASVEVQTEIKALVEQCRTALRNRADEND
Ga0306925_106458882	3300031890	Soil	DPRALAQICARVDYINSLQENLRGQEAASEDVRTEFKALVEQCRAALRDRAEEND
Ga0318536_105154352	3300031893	Soil	DYVNSLQENLHGQLAGDEVGAELKALVEQCRTALRNRADEND
Ga0318522_104241812	3300031894	Soil	ICARVDYVNGLQENLKGGQDAASDEVGGELKALVEQCRTALRNRAEEND
Ga0318551_108464951	3300031896	Soil	AGYLLAGLWSSARDTSPLAQICARVDYVNGLQETLKDSASEEVRTEIKALVEECRTALRDSADEND
Ga0318551_108826042	3300031896	Soil	SSARDTSPLAQICARVDYVNGLQENLKGQDPATEEVSVGLKSLVEQCRAALRDRAEEND
Ga0318520_110335992	3300031897	Soil	WWHARDTGRLAQICARVDYVNSLQENLKEPDAASEQVGSELRALVEQCRTALRDSAEEND
Ga0310913_107203232	3300031945	Soil	ALLPDISWPVCGSSARDTSPLAQICARVDYVDGLQETLKDSASEEARTEIKALVEQCRAALRNRAEEND
Ga0318569_101596373	3300032010	Soil	ARDTSPLAQICARVDYVNSLQQNLHGQLAGDEVGAELKALVEQCRTALRNRADEND
Ga0318545_102448862	3300032042	Soil	DYVNGLQENLKGQDPATEEVSVGLKALVEQCRAALRDRAEEND
Ga0318506_105573692	3300032052	Soil	ICARVDYVNGLQENLKGQDPATEEVSVGLKALVEQCRAALRDRAEEND
Ga0318505_102985533	3300032060	Soil	GYLLAGWWWSSARDTSPLAQICARVDYVNGLQETLKDSASVEVQTEIKELVEQCRAALRNRADEND
Ga0318505_103224631	3300032060	Soil	AGLWSSARDTSPLAQICARVDYVDGLQETLKDSASVEAQTEIKALVEQCRTALRNRADEN
Ga0318513_103911151	3300032065	Soil	QETLKDSASEEMRIEIKALVEQCRTALRDRAEEKD
Ga0318514_101333294	3300032066	Soil	LAGLWSSARDTSPLAQICARVDYVDGLQETLKDSASVEAQTEIKALVEQCRTALRNRADEND
Ga0318514_106233611	3300032066	Soil	PLAQICARVDYVNGLQETLEDSASEEVRTEIKALVEECRTALRDSADEND
Ga0306924_119278691	3300032076	Soil	YLLAGLWSSARDTSPLAQICARVDYVNGLQETLEDSASEEVRTEIKALVEECRTALRDSADEND
Ga0318525_106829471	3300032089	Soil	SLWSSARDTSPLAQICARVDYVNGLQENLKGQDPATEEVSVGLKALVEQCRAALRDRAEEND
Ga0318540_103718281	3300032094	Soil	LAQICARVDYVNGLQENLKGQDPATEEVSVGLKALVEQCRAALRDRAEEND
Ga0306920_1001902841	3300032261	Soil	AGWWSSARDTNLLAQICARVDYVNGLQENLKGGQDAASDEVGGELKALVEQCRTALRNRAEEND
Ga0306920_1033064471	3300032261	Soil	LLAQICARVDYVNGLQENLKGGQDAAGDEVGVELKALVEQCRTALRNRAEEND
Ga0306920_1035546832	3300032261	Soil	PLAQICARVDYINGLQEQIPDQQAMGEAIRDEFKALVEQCREALRVRAEETD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F044353

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences