Metagenome / Metatranscriptome Family F044348

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F044348
Family Type	Metagenome / Metatranscriptome
Number of Sequences	154
Average Sequence Length	61 residues
Representative Sequence	WLIAASYSEFALLEPERVTIVYPASYEIRDRDYRLVAHPTFPRDGLRAAQQEMSRFYR
Number of Associated Samples	119
Number of Associated Scaffolds	154

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.67 %
% of genes near scaffold ends (potentially truncated)	96.10 %
% of genes from short scaffolds (< 2000 bps)	87.66 %
Associated GOLD sequencing projects	109
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.73

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (92.857 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (29.221 % of family members)
Environment Ontology (ENVO)	Unclassified (37.662 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (48.701 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 17.44% β-sheet: 24.42% Coil/Unstructured: 58.14%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.73
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.73
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
d.223.1.2: Polo-box duplicated region	d3rq7a2	3rq7	0.6936
d.223.1.0: automated matches	d5lhxa_	5lhx	0.67441
c.76.1.2: Arylsulfatase	d1fsua_	1fsu	0.67262
d.223.1.2: Polo-box duplicated region	d3rq7a1	3rq7	0.6705
c.76.1.2: Arylsulfatase	d1auka_	1auk	0.64861

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 154 Family Scaffolds
PF11893	DUF3413	16.88
PF00733	Asn_synthase	6.49
PF13537	GATase_7	5.19
PF02096	60KD_IMP	4.55
PF00535	Glycos_transf_2	2.60
PF07715	Plug	2.60
PF14849	YidC_periplas	2.60
PF01925	TauE	1.95
PF13522	GATase_6	1.30
PF00144	Beta-lactamase	1.30
PF00211	Guanylate_cyc	1.30
PF07978	NIPSNAP	1.30
PF00496	SBP_bac_5	0.65
PF07578	LAB_N	0.65
PF13489	Methyltransf_23	0.65
PF05050	Methyltransf_21	0.65
PF09335	SNARE_assoc	0.65
PF16916	ZT_dimer	0.65
PF07883	Cupin_2	0.65
PF07690	MFS_1	0.65

COG ID	Name	Functional Category	% Frequency in 154 Family Scaffolds
COG0706	Membrane protein insertase Oxa1/YidC/SpoIIIJ	Cell wall/membrane/envelope biogenesis [M]	4.55
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	1.95
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	1.30
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	1.30
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	1.30
COG2367	Beta-lactamase class A	Defense mechanisms [V]	1.30
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	0.65
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	0.65
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	0.65
COG3952	Uncharacterized N-terminal domain of lipid-A-disaccharide synthase	General function prediction only [R]	0.65

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.86 %
Unclassified	root	N/A	7.14 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.86 %
Unclassified	root	N/A	7.14 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.86 %
Unclassified	root	N/A	7.14 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	19.48 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.79 %
Unclassified	root	N/A	7.14 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.30 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.65 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	19.48 %
Unclassified	root	N/A	7.14 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.90 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.30 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.65 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.65 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.65 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	19.48 %
Unclassified	root	N/A	7.14 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.65 %
Oceanospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales	0.65 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.65 %
Gammaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis	0.65 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.65 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	14.94 %
Unclassified	root	N/A	7.14 %
Gallaecimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Gallaecimonas	0.65 %
Isosphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales	0.65 %
Oceanospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oceanospirillaceae	0.65 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.65 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.65 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	14.94 %
Unclassified	root	N/A	7.14 %
Oceanospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oceanospirillaceae → Oceanospirillum	0.65 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.65 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.65 %
Isosphaeraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	0.65 %
Gallaecimonas xiamenensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Gallaecimonas → Gallaecimonas xiamenensis	0.65 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.65 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002121\|C687J26615_10184220	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300003994\|Ga0055435_10071233	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300004009\|Ga0055437_10197691	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	643	Open in IMG/M
3300004009\|Ga0055437_10296268	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300004009\|Ga0055437_10335901	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	507	Open in IMG/M
3300004114\|Ga0062593_102391270	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	596	Open in IMG/M
3300004268\|Ga0066398_10013290	All Organisms → cellular organisms → Bacteria	1260	Open in IMG/M
3300004281\|Ga0066397_10062772	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	701	Open in IMG/M
3300004633\|Ga0066395_10800571	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300005172\|Ga0066683_10266363	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1063	Open in IMG/M
3300005183\|Ga0068993_10047279	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1239	Open in IMG/M
3300005205\|Ga0068999_10006059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oceanospirillaceae → Oceanospirillum	1453	Open in IMG/M
3300005332\|Ga0066388_104977987	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300005332\|Ga0066388_106282423	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	599	Open in IMG/M
3300005434\|Ga0070709_10184630	All Organisms → cellular organisms → Bacteria	1467	Open in IMG/M
3300005445\|Ga0070708_100351285	All Organisms → cellular organisms → Bacteria	1390	Open in IMG/M
3300005445\|Ga0070708_102159611	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300005468\|Ga0070707_100387434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1357	Open in IMG/M
3300005468\|Ga0070707_100993658	All Organisms → cellular organisms → Bacteria → Proteobacteria	804	Open in IMG/M
3300005518\|Ga0070699_101329651	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	659	Open in IMG/M
3300005542\|Ga0070732_10901871	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300005546\|Ga0070696_100232017	All Organisms → cellular organisms → Bacteria	1389	Open in IMG/M
3300005561\|Ga0066699_11275448	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	503	Open in IMG/M
3300005764\|Ga0066903_101460417	All Organisms → cellular organisms → Bacteria	1288	Open in IMG/M
3300005764\|Ga0066903_101468344	All Organisms → cellular organisms → Bacteria	1285	Open in IMG/M
3300005764\|Ga0066903_101591658	All Organisms → cellular organisms → Bacteria	1238	Open in IMG/M
3300005764\|Ga0066903_104908068	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300005764\|Ga0066903_106068266	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	632	Open in IMG/M
3300005829\|Ga0074479_11025288	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1015	Open in IMG/M
3300005841\|Ga0068863_100064258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3471	Open in IMG/M
3300005842\|Ga0068858_100138761	All Organisms → cellular organisms → Bacteria → Proteobacteria	2282	Open in IMG/M
3300006845\|Ga0075421_100986569	All Organisms → cellular organisms → Bacteria	955	Open in IMG/M
3300006852\|Ga0075433_10590789	All Organisms → cellular organisms → Bacteria	975	Open in IMG/M
3300006852\|Ga0075433_10738274	Not Available	861	Open in IMG/M
3300006871\|Ga0075434_101567346	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300006914\|Ga0075436_100200250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1414	Open in IMG/M
3300006914\|Ga0075436_101270241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Gallaecimonas → Gallaecimonas xiamenensis	557	Open in IMG/M
3300007255\|Ga0099791_10445240	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300009012\|Ga0066710_100814235	All Organisms → cellular organisms → Bacteria	1432	Open in IMG/M
3300009088\|Ga0099830_10241814	All Organisms → cellular organisms → Bacteria	1426	Open in IMG/M
3300009089\|Ga0099828_10915614	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300009089\|Ga0099828_11006860	All Organisms → cellular organisms → Bacteria	742	Open in IMG/M
3300009094\|Ga0111539_13066024	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300009143\|Ga0099792_10632196	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300009147\|Ga0114129_11324750	Not Available	891	Open in IMG/M
3300009147\|Ga0114129_11540355	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300009147\|Ga0114129_12433726	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300009147\|Ga0114129_13235639	Not Available	529	Open in IMG/M
3300009176\|Ga0105242_10469160	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1190	Open in IMG/M
3300009177\|Ga0105248_10317105	All Organisms → cellular organisms → Bacteria	1756	Open in IMG/M
3300009792\|Ga0126374_11862790	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300009804\|Ga0105063_1077809	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300009813\|Ga0105057_1096553	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	542	Open in IMG/M
3300010043\|Ga0126380_10036979	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2528	Open in IMG/M
3300010047\|Ga0126382_10025968	All Organisms → cellular organisms → Bacteria	3136	Open in IMG/M
3300010047\|Ga0126382_10071703	Not Available	2126	Open in IMG/M
3300010047\|Ga0126382_11505048	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300010358\|Ga0126370_11264518	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	690	Open in IMG/M
3300010361\|Ga0126378_12233744	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300010362\|Ga0126377_10884352	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	955	Open in IMG/M
3300010376\|Ga0126381_103171679	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	650	Open in IMG/M
3300010391\|Ga0136847_10677371	All Organisms → cellular organisms → Bacteria	2085	Open in IMG/M
3300010391\|Ga0136847_12133368	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300010398\|Ga0126383_10694084	All Organisms → cellular organisms → Bacteria	1096	Open in IMG/M
3300010400\|Ga0134122_11122163	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300011120\|Ga0150983_13085432	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300011269\|Ga0137392_10261643	All Organisms → cellular organisms → Bacteria	1425	Open in IMG/M
3300011269\|Ga0137392_11477401	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300011269\|Ga0137392_11570648	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	516	Open in IMG/M
3300011270\|Ga0137391_10081049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2798	Open in IMG/M
3300011271\|Ga0137393_10707185	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300012096\|Ga0137389_10823214	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	797	Open in IMG/M
3300012189\|Ga0137388_11147304	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300012201\|Ga0137365_10650374	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300012202\|Ga0137363_10465472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1059	Open in IMG/M
3300012203\|Ga0137399_11361790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	595	Open in IMG/M
3300012205\|Ga0137362_11665614	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300012205\|Ga0137362_11768741	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300012209\|Ga0137379_10572231	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1037	Open in IMG/M
3300012211\|Ga0137377_11378492	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300012349\|Ga0137387_10746027	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300012350\|Ga0137372_10459581	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	953	Open in IMG/M
3300012353\|Ga0137367_10376936	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300012358\|Ga0137368_10226521	All Organisms → cellular organisms → Bacteria	1309	Open in IMG/M
3300012362\|Ga0137361_10016484	All Organisms → cellular organisms → Bacteria	5492	Open in IMG/M
3300012918\|Ga0137396_10756180	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	716	Open in IMG/M
3300012922\|Ga0137394_10446551	All Organisms → cellular organisms → Bacteria	1101	Open in IMG/M
3300012922\|Ga0137394_10704612	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300012922\|Ga0137394_11058321	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300012925\|Ga0137419_10541445	All Organisms → cellular organisms → Bacteria	929	Open in IMG/M
3300012925\|Ga0137419_10690938	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	827	Open in IMG/M
3300012927\|Ga0137416_10611673	All Organisms → cellular organisms → Bacteria	950	Open in IMG/M
3300012929\|Ga0137404_10966778	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300012948\|Ga0126375_10567620	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300012948\|Ga0126375_11077750	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300012971\|Ga0126369_10268109	All Organisms → cellular organisms → Bacteria	1690	Open in IMG/M
3300012971\|Ga0126369_11938192	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	677	Open in IMG/M
3300012975\|Ga0134110_10498628	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300012976\|Ga0134076_10641449	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300014269\|Ga0075302_1068961	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	746	Open in IMG/M
3300014326\|Ga0157380_11289092	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300015053\|Ga0137405_1344064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4241	Open in IMG/M
3300015077\|Ga0173483_10984219	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300015245\|Ga0137409_10069238	All Organisms → cellular organisms → Bacteria	3308	Open in IMG/M
3300015245\|Ga0137409_10646767	All Organisms → cellular organisms → Bacteria	889	Open in IMG/M
3300015259\|Ga0180085_1206071	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300015262\|Ga0182007_10214735	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300015264\|Ga0137403_11463391	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300015264\|Ga0137403_11511824	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300017993\|Ga0187823_10290617	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300018058\|Ga0187766_10852595	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300018084\|Ga0184629_10231674	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300019881\|Ga0193707_1066347	All Organisms → cellular organisms → Bacteria	1127	Open in IMG/M
3300019886\|Ga0193727_1032076	All Organisms → cellular organisms → Bacteria	1794	Open in IMG/M
3300021333\|Ga0210324_1234615	Not Available	629	Open in IMG/M
3300021560\|Ga0126371_12204794	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	665	Open in IMG/M
3300021560\|Ga0126371_13037746	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300022694\|Ga0222623_10060277	All Organisms → cellular organisms → Bacteria	1464	Open in IMG/M
3300025538\|Ga0210132_1056681	Not Available	581	Open in IMG/M
3300025551\|Ga0210131_1026198	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300025906\|Ga0207699_10150141	All Organisms → cellular organisms → Bacteria	1541	Open in IMG/M
3300025910\|Ga0207684_10032970	All Organisms → cellular organisms → Bacteria	4405	Open in IMG/M
3300025911\|Ga0207654_10465763	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300025934\|Ga0207686_10703336	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	803	Open in IMG/M
3300026035\|Ga0207703_10117508	All Organisms → cellular organisms → Bacteria → Proteobacteria	2278	Open in IMG/M
3300026047\|Ga0208658_1013435	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300026320\|Ga0209131_1061388	All Organisms → cellular organisms → Bacteria → Proteobacteria	2083	Open in IMG/M
3300026331\|Ga0209267_1220180	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300026355\|Ga0257149_1054118	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300026358\|Ga0257166_1038023	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300026360\|Ga0257173_1055983	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300026499\|Ga0257181_1031395	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300026537\|Ga0209157_1392333	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	501	Open in IMG/M
3300027846\|Ga0209180_10429963	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300027862\|Ga0209701_10306697	All Organisms → cellular organisms → Bacteria	910	Open in IMG/M
3300027874\|Ga0209465_10045670	Not Available	2089	Open in IMG/M
3300027874\|Ga0209465_10490776	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	613	Open in IMG/M
3300027875\|Ga0209283_10494881	All Organisms → cellular organisms → Bacteria	787	Open in IMG/M
3300027875\|Ga0209283_10533170	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300027875\|Ga0209283_10616108	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300028536\|Ga0137415_10699356	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300028711\|Ga0307293_10060787	All Organisms → cellular organisms → Bacteria	1181	Open in IMG/M
3300028719\|Ga0307301_10202277	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300028784\|Ga0307282_10376409	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300028884\|Ga0307308_10321754	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300031771\|Ga0318546_10257579	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1202	Open in IMG/M
3300031779\|Ga0318566_10017734	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3106	Open in IMG/M
3300032174\|Ga0307470_10685817	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300032174\|Ga0307470_10869532	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	705	Open in IMG/M
3300032256\|Ga0315271_10404197	All Organisms → cellular organisms → Bacteria	1145	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.01%
Host-Associated	Host-Associated	12.99%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.97%
Plants	Host-Associated → Plants	12.99%
Aquatic	Environmental → Aquatic	11.04%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.97%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.04%
Marine	Environmental → Aquatic → Marine	5.84%
Freshwater	Environmental → Aquatic → Freshwater	2.60%
Sediment	Environmental → Aquatic → Sediment	2.60%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.14%
Loam	Environmental → Terrestrial → Soil → Loam	15.58%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.04%
Wetlands	Environmental → Aquatic → Marine → Wetlands	5.19%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.60%
Lake	Environmental → Aquatic → Freshwater → Lake	1.95%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.95%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.95%
Sand	Environmental → Terrestrial → Soil → Sand	1.30%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.65%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	46.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.04%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.44%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.49%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.84%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	5.19%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.60%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.95%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.95%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.30%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.65%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.65%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.65%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	29.22%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.39%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.79%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.14%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.49%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	5.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.95%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	1.30%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.30%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.30%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.30%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.30%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.30%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.30%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.65%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.65%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.65%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.65%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.65%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.65%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.65%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.65%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.65%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.65%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.65%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002121	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1	Environmental	Open in IMG/M
3300003994	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2	Environmental	Open in IMG/M
3300004009	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005183	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1	Environmental	Open in IMG/M
3300005205	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D2	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005829	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBC	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009804	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_30_40	Environmental	Open in IMG/M
3300009813	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_10_20	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014269	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015259	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_10D	Environmental	Open in IMG/M
3300015262	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG	Host-Associated	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021333	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S.191 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300025538	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025551	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026047	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D1_rd (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026355	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-A	Environmental	Open in IMG/M
3300026358	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-14-B	Environmental	Open in IMG/M
3300026360	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-B	Environmental	Open in IMG/M
3300026499	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-B	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C687J26615_101842202	3300002121	Soil	SHLDFALIEPERVTIVRPNGYEIRDRNYRLVPNPQLPDAGLRAALAEMRRFYR*
Ga0055435_100712331	3300003994	Natural And Restored Wetlands	DYASGRDLFSEGQWDWLIAASYSDFALIEPERVTIVYPASYEIRDRDYRLVAHPTPPRDSLRVAQREMSRFFR*
Ga0055437_101976912	3300004009	Natural And Restored Wetlands	DLYTDAQWDWLIATDYTDYALIEPDRVTVVLQDAYEVHDRNYRLVPHPTLSRDGLRAALDDMSRFYR*
Ga0055437_102962682	3300004009	Natural And Restored Wetlands	SSGKSLFSDGEWSSLIAASYSDFAVVEPDRVTLVLSAGYEMRDGKYRLIQNPTLPRDALRDAMREMSRFYR*
Ga0055437_103359011	3300004009	Natural And Restored Wetlands	DLYTDAQWDWLIATDYTDYALVEPDRVTVVLHDAYEVRDGNYRLLPHPTFPRHGLRAALDDMSRFYR*
Ga0062593_1023912702	3300004114	Soil	WLIAASYSEFALIEPERVTIVYPAGYEIRDRDYQLVAYPTLPRDGLRAAQKEMSRFFR*
Ga0066398_100132901	3300004268	Tropical Forest Soil	FAVIEPDRVTVVLGSGYEIRDKSYRLIPHPTLPRDLMQSAMHEMSRFYR*
Ga0066397_100627722	3300004281	Tropical Forest Soil	SGQDLFGEHAWPWLVAAGRHNFALVEAGRVTIVWPTAYEIRDGSYRLIPDATLPRERLRAALEEMRRFYRP*
Ga0066395_108005711	3300004633	Tropical Forest Soil	WLIAASYTDFALVQPDQVTIVYPAGYEVRDREYRLIPRPAFPQEALRAALREMRRFYQ*
Ga0066683_102663631	3300005172	Soil	FSDAQWDWLIAASYEDFALIEPDRVTVVLPSSYEIRDRNYRLVPKPTLPRDVVQAALKEMSRFYR*
Ga0068993_100472793	3300005183	Natural And Restored Wetlands	TDAQWDWLIATDYTDYALVEPDRVTVVLQDAYEVRDRNYRLVPHPTLPRDGLRAALREMSRFYK*
Ga0068999_100060591	3300005205	Natural And Restored Wetlands	YASGRDLFSEGQWDWLIAASYSDFALIEPERVTIVYPASYEIRDRDYRLVAHPMLPRDSLRAAQREMSRFFR*
Ga0066388_1049779872	3300005332	Tropical Forest Soil	QSLFSDAEWHWLITASYTEFALIQPDQVTIVYPASYEIRDLNYHLISRATPPQDGLRAAFQEMRRFYR*
Ga0066388_1062824231	3300005332	Tropical Forest Soil	IGAGYEDFAVIEPDRVTVVFGSGYEIRDGSYRLVPNPTLPRDLLRSAMDEMSRFYR*
Ga0070709_101846302	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	PWSWLIAASYTEFALIEPERVTIVYPAYYEIRGRDYRLIPGATPPRDALLDAQKEMGRFYR*
Ga0070708_1003512852	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	DLYTDAPWPWLVAASYSEFALLEPDRVTIVYPASYEIRDRDYRLNPHPSPPREALLEAQKEMGRFYR*
Ga0070708_1021596112	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	IAASYADYALIEPERVTIVYPAGYEIRDGEYRLVRNPTIPRDVVRAALHEMSRFYR*
Ga0070707_1003874342	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	SDKQWSWLIAASYSDYALIEPDRVTVVFPAGYEIRDRSYRLVANPTLPRDGLRAAMHEMSRFYR*
Ga0070707_1009936582	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	GQSLFAGSQWDWLIAASHNDFALIEPDRVTIAYPADYEIRDRNYRLVQNPRIPHDGLRAALREMRRFYR*
Ga0070699_1013296511	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	AAGYEDFALIEPDRVTVVLPSSYEIRDRNYRLVPKPTLPRDVVQAALKEMSRFYR*
Ga0070697_1000175488	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	WLIAVSHNDYALVEPDRVTIVYPGGNEIRDRSYRLVQNPKLSRDNLRAAMQEMGRFYH*
Ga0070732_109018712	3300005542	Surface Soil	LYTDAPWSWLIAASYTEFALLEPSRVTIVYPAYYEIRGRDYHLIPRATPPRDALLSAQKEMGRFYR*
Ga0070696_1002320172	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	DAPWSWLVAASYTEFALLEPDRVTIVYPAYYEIRGRDYHLIPRATPPRDALLSAQKEMGRFYR*
Ga0066699_112754482	3300005561	Soil	SDYALIEPDRITVIFPAGYEIRDRNYRLLQHPTLPRDGLRAALHEMSRFYR*
Ga0066903_1014604173	3300005764	Tropical Forest Soil	DFAVIEPDRVTVVLGSGYEIRDKSYRLIPHPTLPRDLMQSAMHEMSRFYR*
Ga0066903_1014683441	3300005764	Tropical Forest Soil	DLFGDTQWSWLIAASYDDFAVIEPDREIIVLGSGVEIRDERYRLVSNPTIPRDVLRAAMREMSRFYR*
Ga0066903_1015916581	3300005764	Tropical Forest Soil	YASGQDLFGERAWPWLVAAGRHNFALVEPERVTIVWPTTYEIRDGSYRLIPDATLPREPLRAALEEMRRFYRP*
Ga0066903_1049080681	3300005764	Tropical Forest Soil	DLFGDTQWSWLIAASYDDFAVIEPDREIIVLGSGVEIRDDRYRLVSNPTIPRDVLREAMWEMSRFYR*
Ga0066903_1060682661	3300005764	Tropical Forest Soil	AQWDWLITASYTAFALLQPDQVTIIYPAGYEVRDREYRLIPRPTFPQDALRAALREMRRFYQ*
Ga0074479_110252882	3300005829	Sediment (Intertidal)	QWDWLIATDYTDYALIEPDRVTVVLQDSYEIRDRNYRLVPNPALPRDGLRAALREMRRFYR*
Ga0068863_1000642581	3300005841	Switchgrass Rhizosphere	APWPWLVAASYSEFALLEPDRVTIVYPASYEIRDRDYRLNPHPSPPREALLEAQKEMGRFYR*
Ga0068858_1001387611	3300005842	Switchgrass Rhizosphere	HDLYTDAPWPWLVAASYSEFALLEPDRVTIVYPASYEIRDRDYRLNPHPSPPREALLEAQKEMGRFYR*
Ga0075421_1009865692	3300006845	Populus Rhizosphere	ASYSEFALIEPERVTIVYPVSYEIRDRDYRLVTHPTLPRDSLRAAQKEMSRFLR*
Ga0075433_105907892	3300006852	Populus Rhizosphere	ASGHDLFTDAEWDWLIATDYTDYALIEPDRVTVVLQNAYEIRDGHYRLIPHPTLPREGLRAALHEMSRFYR*
Ga0075433_107382741	3300006852	Populus Rhizosphere	HSLFSGVAWDWLIGAGYEDFALIETDRVTVVFRSGYEIRDGSYRLLPHPTLPRDLVRSAMHEMSRFYR*
Ga0075434_1015673461	3300006871	Populus Rhizosphere	DFAVIEPNRVIVVLPGGYEIRDRHYRLVPNPTLPRDALHAAMREMSRFYR*
Ga0075436_1002002501	3300006914	Populus Rhizosphere	ASDYASGHDLFTDAEWDWLIATDYTDYALIEPDRVTVVLQNAYEIRDGHYRLIPHPTLPREGLRAALHEMSRFYR*
Ga0075436_1012702411	3300006914	Populus Rhizosphere	GSYSDFALIEPDQVTVVYDTAYEVRDGGYRLVPRPRLRRDVLRAALREMSRFYR*
Ga0099791_104452402	3300007255	Vadose Zone Soil	EGQWDWLIAASYSEFALLEPERVTIVYPASYEIRDRDYRLVAHPTLPRDGLRDAQKEMSRFYR*
Ga0066710_1008142352	3300009012	Grasslands Soil	YASGADLFSDKQWTWLIAASYSDYALIEPDRITVIFPAGYEIRDRNYRLLQHPTLPRDGLRAALHEMSRFYR
Ga0099830_102418141	3300009088	Vadose Zone Soil	LSNPSLLGGLSDAQWNWLIAASCADFALIEPDRVTVVFPSGYEIRDRNYRLVSNPTFPRESLRAAGHKMRRFYR*
Ga0099830_118638531	3300009088	Vadose Zone Soil	HNDYALVEPDRVTIVYPGGNEIRDRSYRLVLNPKLSRDNLRAAMQAMGRFYH*
Ga0099828_109156141	3300009089	Vadose Zone Soil	QWDWLIATSYSDFALVEPERVTIVYPAGYEIRDQNYLLVSNPKLSRDVVRAALQEMSPFYR*
Ga0099828_110068601	3300009089	Vadose Zone Soil	LTDFALIEPDRVIIVYRAGIEIRDQNYRLVQNPTLPRDRLRAALQEMSRFYR*
Ga0111539_130660242	3300009094	Populus Rhizosphere	WLIAASYVDFAVIEPNRVIVVLPGGYEIRDRNYRLVPNPTLPRDALQAAMRELSRFYR*
Ga0099792_106321961	3300009143	Vadose Zone Soil	WLVAASYTEFALLEPDRVTIVYPAYYEIRGRDYHLIPRATPPRDALLSAQKEMGRFYR*
Ga0114129_113247501	3300009147	Populus Rhizosphere	AASYSEFALIEPERVTIVHLTSYEIRDGHYRLVARPRLPRDGLRAAEKEMSRFFR*
Ga0114129_115403552	3300009147	Populus Rhizosphere	AASYSEFALLEPERVTIVYPASYEIRDRDYRLVAHPTFPRDGLRAAQQEMSRFFR*
Ga0114129_124337262	3300009147	Populus Rhizosphere	AASYSEFALLEPERVTIVYPASYEIRDRDYRLVAHPTFPHDGLRAAQQEMSRFYR*
Ga0114129_132356392	3300009147	Populus Rhizosphere	ALIEPDRVTVVYQSSYFETRDRDYRLIARPERRGDVLRAALHEMSRFYR*
Ga0105242_104691602	3300009176	Miscanthus Rhizosphere	EDFALIEPDRVTVVLPSSYEIRDRNYRLVPKPTLPRDVVQAALKEMSRFYR*
Ga0105248_103171052	3300009177	Switchgrass Rhizosphere	GHSLFSDAQWDWLIAAGYEDFALIEPARVTVVLPSSYEIRDRNYRLVPKPTLPRNVVQAALKEMSRFYR*
Ga0126374_118627901	3300009792	Tropical Forest Soil	SDYASGHSLFSGVAWDWLIGAGYEDFADIEPDRVTVVLGSGYEIRDKSYRLIPHPTLPRDLMQSAMHEMSRFYR*
Ga0105063_10778092	3300009804	Groundwater Sand	FSDAQWDWLIVASYREYAVVEPDRVTVIYPASYEIRDRRYRLIARPTVPRDTLRAALQEMSRFYR*
Ga0105057_10965531	3300009813	Groundwater Sand	AVVEPDRVIVVLPGGYEIRDRNYRLVSNPTLPLEALRAAMQEMSRFYR*
Ga0126380_100369791	3300010043	Tropical Forest Soil	GYEDFAVIEPDRVTVVLGSGYEIRDKSYRLIPHPTLPRDLMQSAMHEMSRFYR*
Ga0126382_100259681	3300010047	Tropical Forest Soil	SLFSDAQWDWLIAASYTDFALLQPDQVTIVYPAGYEVRDRRYRLIPRPTFPEDGLRAALREMRRFYQ*
Ga0126382_100717031	3300010047	Tropical Forest Soil	QSLFSDAQWDWLIAASYTDFALVQPDQVTIVYPAGYEVRDREYRLIPRPAFPQDALRAALREMRRFYQ*
Ga0126382_115050482	3300010047	Tropical Forest Soil	FSGVAWDWLIGAGYEDFAVIEPDRVTVVFGSGYEIRDRRYRLVPNPTLPRDLLRSAMHEMSRFYR*
Ga0126370_112645181	3300010358	Tropical Forest Soil	GAGYEDFAVIEPDRVTVVFGSGYEIRDGSYRLVPNPTLPRDLLRSAMDEMSRFYR*
Ga0126378_122337441	3300010361	Tropical Forest Soil	DTQWSWLIAASYDDFAVIEPDREIIVLGSGVEIRDERYRLVSNPTIPRDVLRAAMREMSRFYR*
Ga0126377_108843521	3300010362	Tropical Forest Soil	LFSDAQWDWLIAASYTDFALVQPDQVTIVYPAGYEVRDREYRLIPRPAFPQEALRAALREMRRFYQ*
Ga0126381_1031716791	3300010376	Tropical Forest Soil	QWDWLIAASYTDFALVQPDQVTIVYPAGYEVRDREYHLIPRPAFPQDALRAALREMRRFYQ*
Ga0136847_106773713	3300010391	Freshwater Sediment	GASHLDFALIEPERVTIVRPNGYEIRDRNYRLVQNPQLPNAGLRAALQEMRRFYR*
Ga0136847_121333681	3300010391	Freshwater Sediment	QWLIGASHLDFALIEPERVTIVRPNGYEIRDRNYRLVQNPQLPSAGLRAALQEMRRFYR*
Ga0126383_106940841	3300010398	Tropical Forest Soil	PDRVTVVLGSGYEIRDKSYRLIPHPTLPRDLMQSAMHEMSRFYR*
Ga0134122_111221632	3300010400	Terrestrial Soil	DLFSDGQWDWLIAASYSEFALIEPERVTIVYSASYEIRDRDYRLVIHPTLPREDLRAAQKEMSRFYR*
Ga0150983_130854322	3300011120	Forest Soil	SGHDLFADAQWDWLIAASYRDFAVIEPTQVTVVIPAGYEIRDRSYRLISNPTIPRDSLRAALREMSRFYR*
Ga0137392_102616431	3300011269	Vadose Zone Soil	RFSDGQWDWLIAASYSEFALLELERVTIVYPASYEIRDRDYRLVARPTFPRDGLRAAQQEMSRFYR*
Ga0137392_113855361	3300011269	Vadose Zone Soil	AVSHNDYALVEPDRVTIVYPGGNEIRDRSYRLVLNPKLSRDNLRAAMQEMGRFYH*
Ga0137392_114774011	3300011269	Vadose Zone Soil	VSHNDYALVEPDRVTIVYPGGNEIRDRSYRLVQNPKLSRDTLRAAMQEMGRFYH*
Ga0137392_115706482	3300011269	Vadose Zone Soil	IEPDRVTVVLPSSYEIRDRNYRLVPKPTLPRDVVQAALKEMSRFYR*
Ga0137391_100810491	3300011270	Vadose Zone Soil	AVSHNDYALVEPDRVTIVYPGGNEIRDRSYRLVQNPKLSRDNLRAAMQEMGRFYH*
Ga0137393_107071851	3300011271	Vadose Zone Soil	VAASYSDYALIEPDRVTVVFPAGYEIRDRSYRLVANPTLPRDGLRAAMHEMSRFYR*
Ga0137389_108232142	3300012096	Vadose Zone Soil	ADFALIEPDRVTIVYPAGYEIRDGSYRLVPNPTLPRHVVRRALHEMSRFYQ*
Ga0137388_111473043	3300012189	Vadose Zone Soil	FALIEPDRVTIVYPAGYEIRDGSYRLVPNPTLPRHVVRRALHEMSRFYQ*
Ga0137365_106503741	3300012201	Vadose Zone Soil	SYADFALIEPDRVTIVHPAGYEIRDRSYRLVPNPTLPRDVVRGALHEMSRFYR*
Ga0137363_104654722	3300012202	Vadose Zone Soil	ADFALIEPDRVTVVFPFGYEIRDRNYRLVPNPTLPRDGLRAAMHEMGRFYR*
Ga0137399_113617902	3300012203	Vadose Zone Soil	PPSDYASGHDLFTDAQWDWLIVTDYTDYALIEPDRVTVVLQDAYEIRDRNYRLVPNPTLPRDGLRAALREMSRFYK*
Ga0137362_116656141	3300012205	Vadose Zone Soil	SGDDLFSDKQWSWLIAASYTDYALIEPDRVTIVYPADYEIRDRDYRLLQHPTLPRDGLRAALHEMRRFLR*
Ga0137362_117687411	3300012205	Vadose Zone Soil	ASYRDFALVDPERVTLVLPAGYEIRDRRYRLDMHPTLPRDALRSAVQEMSRFYR*
Ga0137379_105722311	3300012209	Vadose Zone Soil	QWDWLIAAGYEDFALIEPDRVTVVLPSSYEIRDRNYRLVPRPTLPRDVVQAALKEMSRFYR*
Ga0137377_113784921	3300012211	Vadose Zone Soil	SGQSLFGDWQWDWLIAASHNDFALIEPDRVTIAYPAGYEIRDRSYRLVQNPKIPHDALRAALQEMRRFYR*
Ga0137387_107460271	3300012349	Vadose Zone Soil	ASGHDLFSDAQWDWLIGASHLDFAVIEPDRVTVVRPNGYEIRDRGYRLIPNPTVPRDVVRAALHELRRFYR*
Ga0137372_104595812	3300012350	Vadose Zone Soil	ASYADFALIEPDRVTIVHPAGYEIRDRSYRLVPNPTLPRDVVRGALHEMSRFYR*
Ga0137367_103769362	3300012353	Vadose Zone Soil	SDYASGHDLFTDAQWDWLIATDYTDYALIEPDRVTVVFQDAYEVRDGNYRLVSNPTLPRDGLRAALREMSRFYK*
Ga0137368_102265212	3300012358	Vadose Zone Soil	KWDWLIGASYEDFALIEPDRVTVVFPSGYEIRDGNYKLVTNQTLPRDLVRAAMHEMSRFYR*
Ga0137361_100164841	3300012362	Vadose Zone Soil	AVSHNDYALVEPDRVTIVYPGGNEIRDRSYRLVQNPKLSRDTLRAAMQEMGRFYH*
Ga0137396_107561801	3300012918	Vadose Zone Soil	AASYSDYALIEPDRITVVFPAGYEIRDRNYRLLQHPTLPRDGLRAALHEMSRFYR*
Ga0137394_104465511	3300012922	Vadose Zone Soil	SLFSDAQWNWLIAASYADFAVIEADRVTVVFPSGYEIRDRSYRLVPNPMLPRDSLRAAMHEMGRFYR*
Ga0137394_107046121	3300012922	Vadose Zone Soil	WSWLVAASYSDYALIEPDRVTVVFPAGYEIRDRSYRLVANPTLPRDGLRAAMHEMSRFYR
Ga0137394_110583212	3300012922	Vadose Zone Soil	ASYSEFAVLEPERVTIVYPASYEIRDRDYRLVAHPTFPRDSLRAAQQEMRRFFR*
Ga0137419_105414452	3300012925	Vadose Zone Soil	GQWDWLIAASYSEFALLEPERVTIVYPASYEIRDRDYRLVVHPTFPHDGLRAAQQEMSRFFR*
Ga0137419_106909382	3300012925	Vadose Zone Soil	LIAASYSDYALIEPDRITVVFPAGYEIRDRNYRLLQNPPLPRDGLRAALHEMSRFYR*
Ga0137416_106116732	3300012927	Vadose Zone Soil	AASYADYALIEPEQVTIVYPAGYEIRDRDYRLVGHPTIPRDVVRAALHEMSRFYR*
Ga0137404_109667782	3300012929	Vadose Zone Soil	DLFSDGQWDWLIAASYSEFALLEPERVTIVYPASYEIRDRDYRLVVHPTFPHDGLRAAQQEMSRFFR*
Ga0126375_105676202	3300012948	Tropical Forest Soil	AWDWLIGAGYEDFAVIEPDRVTVVLGSGYEIRDKRYRLIPHPTLPRDLMQSAMHEMSRFYR*
Ga0126375_110777501	3300012948	Tropical Forest Soil	SSGHSLFSGVAWDWLIGAGYEDFAVIEPDRVTVVFGSAYEIRDGSYRLVPNPTLPRDLLRSAMHEMSRFYR*
Ga0126369_102681093	3300012971	Tropical Forest Soil	DFAVIEPDRVTVVFGSGYEIRDGSYRLVPNPTLPRDLLRSAMHEMSRFYR*
Ga0126369_119381922	3300012971	Tropical Forest Soil	ITASYTAFALLQPDQVTIIYPAGYEVRDREYRLIPRPTFPQDALRAALREMRRFYQ*
Ga0134110_104986282	3300012975	Grasslands Soil	AASHNDFALIEPDRVTIAYPAGYEIRDRNYRLVQKPKIPHDALRAALQEMRRFYR*
Ga0134076_106414492	3300012976	Grasslands Soil	LVEPDQVTIVSPTSYEIRDRSYRLIPNPTLPRDHLRAAMHEMRRFYR*
Ga0075302_10689611	3300014269	Natural And Restored Wetlands	AQWDWLIATDYTDYALVEPDRVTVVLQDAYEVRDRNYRLVPHPTLPRDGLRAALREMSRFYK*
Ga0157380_112890921	3300014326	Switchgrass Rhizosphere	LYSDAPWPWLVAASYSEFALLEPDRVTIVYPASYEIRDRDYRLNPHPSPPREALLEAQKEMGRFYR*
Ga0137405_13440644	3300015053	Vadose Zone Soil	VIEPDRVTVVFPSGYEIRDRSYRLVPNPMLPRDSLRAAMHEMGRFYR*
Ga0173483_109842192	3300015077	Soil	EFALLEPDRVTIVYPASYEIRDRDYRLNPHPSPPREALLEAQKEMGRFYR*
Ga0137409_100692384	3300015245	Vadose Zone Soil	YASGRDLFSEGQWDWLIAASYSEFALLEPERVTIVYPASYEIRDRDYRLVVHPTFPHDGLRAAQQEMSRFFR*
Ga0137409_106467672	3300015245	Vadose Zone Soil	YASGRDLFSEGQWDWLIAASYSEFAVLEPERVTIVYPASYEIRDRDYRLVAHPTFPRDSLRAAQQEMRRFFR*
Ga0180085_12060712	3300015259	Soil	GAGYEDFALIEPDRVTVVFPSGYEIRDRNYRLVPNPTLPRDLVRAAMHEMSRFYR*
Ga0182007_102147351	3300015262	Rhizosphere	GHDLYTDAPWPWLVAASYSEFALLEPDRVTIVYPASYEIRDRDYRLNPHPSPPREALLEAQKEMGRFYR*
Ga0137403_114633911	3300015264	Vadose Zone Soil	GQSLFGDCQWDWLIAASHNDLALIEPDRVTIAYPAGYEIRDRTYRLVQKPKIPHDPLRAALQEMRRFYR*
Ga0137403_115118241	3300015264	Vadose Zone Soil	WDWLIAASHNDFALIEPDRVTIAYPADYEIRDRDYRLVQNPTIPHDGLRAALREMRRFYR
Ga0187823_102906171	3300017993	Freshwater Sediment	YTEFALLEPDRVTIVYPAYYEIRGRDYHLIPRATPPRDALLSAQKEMGRFYR
Ga0187766_108525952	3300018058	Tropical Peatland	FALIEPERVTIMRQNGYEVRDRDYRLMRNPKLPRESLPAALEQIRRFYR
Ga0184629_102316741	3300018084	Groundwater Sediment	DTQWDWLIATSYSDFALIEPERVTVVYPAAYEIRDQNYRLVPNPKLSRDVVRAALHEMSRFYR
Ga0193707_10663472	3300019881	Soil	VAASYTEFALLEPDRVTIVYPAYYEIRGRDYRLIPRATPSRDALLSAQKEMGRFYR
Ga0193727_10320762	3300019886	Soil	DLFSDGQWDWLIAASYSEFALLEPERVTIVYPASYEIRDRDYRLVAHPTFPHDGLRAAQQEMSRFFR
Ga0210404_105973531	3300021088	Soil	AEFALIEPERVTIVFPAYYEIRGRDYRLSPHATPPRAALLDAQKEMGRFYR
Ga0210324_12346151	3300021333	Estuarine	QDLFADRQWDWLIAASYNNFALVEPDRVTIISPPSYEVRDRNYRLVPNPTLPREGLRAALHEMRRFYR
Ga0126371_122047942	3300021560	Tropical Forest Soil	ITASYTAFALLQPDQVTIIYPAGYEVRDREYRLIPRPAFPQDALRAALQEMRRFYQ
Ga0126371_130377461	3300021560	Tropical Forest Soil	SGHSLFSGVAWDWLIGAGYEDFAVIEPDRVTVVFGSGYEIRDRRYRLIPNPTLPRDLLRSAMHEMSRFYR
Ga0222623_100602771	3300022694	Groundwater Sediment	RDLFSEGQWDWLIAASYSEFALIEPERVTIVYPASYEIRDRDYRLVAHPMFPRAGLRAAQQEMSRFFR
Ga0210132_10566811	3300025538	Natural And Restored Wetlands	NFALVEPDQVTIVSPTSYEIRDRNYRLIPNPTLPRDHLRAAMHEMRRFYR
Ga0210131_10261981	3300025551	Natural And Restored Wetlands	DYASGRDLFSEGQWDWLIAASYSDFALIEPERVTIVYPASYEIRDRDYRLVAHPTPPRDSLRVAQREMSRFFR
Ga0207699_101501412	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	PWSWLIAASYTEFALIEPERVTIVYPAYYEIRGRDYRLIPGATPPRDALLDAQKEMGRFY
Ga0207684_100329701	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	SHNDYALVEPDRVTIVYPGGNEIRDRSYRLVQNPKLSRDTLRAAMQEMGRFYH
Ga0207654_104657632	3300025911	Corn Rhizosphere	IAASYSEFALIEPERVTIVYPASYEIRDRAYRLVAHPTLPREGLRGAQKEMSRFYR
Ga0207686_107033362	3300025934	Miscanthus Rhizosphere	EDFALIEPDRVTVVLPSSYEIRDRNYRLVPKPTLPRDVVQAALKEMSRFYR
Ga0207703_101175083	3300026035	Switchgrass Rhizosphere	TDAPWPWLVAASYSEFALLEPDRVTIVYPASYEIRDRDYRLNPHPSPPREALLEAQKEMGRFYR
Ga0208658_10134352	3300026047	Natural And Restored Wetlands	ADYASGRDLFSEGQWDWLIAASYSDFALIEPERVTIVYPASYEIRDRDYRLVAHPTPPRDSLRAAQKEMSRFFR
Ga0209131_10613881	3300026320	Grasslands Soil	ASYSEFAVLEPERVTIVYPASYEIRDRDYRLVAHPTFPRDSLRAAQQEMRRFFR
Ga0209267_12201801	3300026331	Soil	AASYADYALIEPERVTIVYPAGYEIRDREYRLVGNPTIPRDVVRAALHEMSRFYR
Ga0257149_10541181	3300026355	Soil	YTEFALLEPDRVTIVYPAYYEIRGRDYHLIPRAMPPRDALLSAQKEMGRFYR
Ga0257166_10380231	3300026358	Soil	WLIAASHNDFALIEPDRVTIAYPADYEIRDRDYHLVQNPRIPHDGLRAALREMRRFYR
Ga0257173_10559832	3300026360	Soil	EGQWDWLIAASYSEFALIESERVTIVYPASYEIRDRDYRLVAHPTFPRAGLGAAQQEMSRFFR
Ga0257181_10313952	3300026499	Soil	SDYASGRDLFSEGQWDWLIAASYSEFALIESERVTIVYPASYEIRDRDYRLVAHPTFPRAGLGAAQQEMSRFFR
Ga0209157_13923331	3300026537	Soil	GPPWSWLIATDYTDYALVEPDRITVVLQDAYEIRDANYRLVPHPTLPRDGLRAALREMSRFYK
Ga0209180_104299631	3300027846	Vadose Zone Soil	DFALIEPGRVIIVYRAGIEIRDQNYRLVQNPTLPRDRLRAALQEMSRFYR
Ga0209701_103066973	3300027862	Vadose Zone Soil	RRASGSQWNWLIAASYADFALIEPDRVTVVFPSGYEIRDRNYRLVSNPTFPRESLRAAGHKMRRFYR
Ga0209465_100456702	3300027874	Tropical Forest Soil	LIAASYTDFALVQPDQVTIVYPAGYEVRDREYHLIPRPAFPQDALRAALREMRRFYQ
Ga0209465_104907761	3300027874	Tropical Forest Soil	LIAASYTDFALVQPDQVTIVYPAGYEVRDREYRLIPRPAFPQEALRAALREMRRFYQ
Ga0209283_104948811	3300027875	Vadose Zone Soil	RQWEWLIALGLTDFALIEPDRVIIVYRAGIEIRDQNYRLVQNPTLPRDRLRAALQEMSRFYR
Ga0209283_105331701	3300027875	Vadose Zone Soil	RQWEWLIALGLTDFALIEPDRVIIVYRAGLEIRDENYRLVQSPTLPRDRLRAALQEMSRFYR
Ga0209283_106161082	3300027875	Vadose Zone Soil	CASGRDLFSEGQWDWLIAASYSEFALLEPERVTIVYPASYEIRDRDYRLVAHPTFPHDGLRAAQQEMSRFFR
Ga0137415_106993561	3300028536	Vadose Zone Soil	NDFALIEPDRVTIAYPADYEIRDRDYRLVQNPRIPHDGLRAALREMRRFYR
Ga0307293_100607872	3300028711	Soil	YSEFALLEPERVTIVYPASYEIRDRDYRLVAHPTFPRDGLRAAQQEMSRFYR
Ga0307301_102022772	3300028719	Soil	WLIAASYSEFALLEPERVTIVYPASYEIRDRDYRLVAHPTFPRDGLRAAQQEMSRFYR
Ga0307282_103764091	3300028784	Soil	SDGQWDLLIAASYSEFALLEPERVTIVYPASYEIRDRDYRLVAHPTFSRDGLRAAQQEMRRFFR
Ga0307308_103217541	3300028884	Soil	WLIAASYSEFALLEPERVTIVYPASYEIRDRDYRLVAHPTFPRDALRAAQQEMSRFYR
Ga0318546_102575791	3300031771	Soil	WDWLIAASYTAFALLQPDQVTVVYPAGYEVRDREYRLIPRPTFPQDALRAALREMRRFYQ
Ga0318566_100177341	3300031779	Soil	DYASGHSLFSGAQWDWLITASYTAFALLQPDQVTVVYPAGYEVRDREYRLIPRPTFPQDALRAALREMRRFYQ
Ga0307470_106858172	3300032174	Hardwood Forest Soil	GHSLFSGVPWDWLIGASYEDFALIEPGRVTVVFPSGYEIRDGSYRLVPNPTLPRGLVRDAMHEMSRFYR
Ga0307470_108695322	3300032174	Hardwood Forest Soil	MRACRCGWRAWDWLIAASYRNFALVEPDQVTIVSPTSYEIRDRSYRLIPNPTLPRDHLRAAMQEMRRFYR
Ga0315271_104041972	3300032256	Sediment	FSDTQWDWLIATNYSDFAFIEPERVTVVYPAAYEIRDQNYRLVPNPKLSRDDVRAALHEMSRFYR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F044348

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences