Metagenome / Metatranscriptome Family F044330

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F044330
Family Type	Metagenome / Metatranscriptome
Number of Sequences	154
Average Sequence Length	49 residues
Representative Sequence	MIARLSRPLVMGLLPVALIACMNSPPTSAEPSAAVPLGIDLGGSGPV
Number of Associated Samples	103
Number of Associated Scaffolds	154

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	97.90 %
% of genes near scaffold ends (potentially truncated)	92.86 %
% of genes from short scaffolds (< 2000 bps)	88.96 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (71.429 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (53.896 % of family members)
Environment Ontology (ENVO)	Unclassified (77.273 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (52.597 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 29.33% β-sheet: 0.00% Coil/Unstructured: 70.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 154 Family Scaffolds
PF00702	Hydrolase	5.84
PF13649	Methyltransf_25	2.60
PF13610	DDE_Tnp_IS240	1.30
PF02796	HTH_7	0.65
PF11799	IMS_C	0.65
PF01526	DDE_Tnp_Tn3	0.65

COG ID	Name	Functional Category	% Frequency in 154 Family Scaffolds
COG4644	Transposase and inactivated derivatives, TnpA family	Mobilome: prophages, transposons [X]	0.65

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.43 %
All Organisms	root	All Organisms	28.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.43 %
cellular organisms	root	All Organisms → cellular organisms	28.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.43 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	28.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.43 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	26.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.43 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	25.32 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.43 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	20.13 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.95 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.65 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.43 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	20.13 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.65 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.65 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.65 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.43 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	20.13 %
Ancylobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Ancylobacter	0.65 %
Rhizobiales bacterium GAS191	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS191	0.65 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.65 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.43 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	20.13 %
Ancylobacter dichloromethanicus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Ancylobacter → Ancylobacter dichloromethanicus	0.65 %
Rhizobiales bacterium GAS191	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS191	0.65 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.65 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.65 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004633\|Ga0066395_10725196	Not Available	592	Open in IMG/M
3300005332\|Ga0066388_104152486	Not Available	738	Open in IMG/M
3300005467\|Ga0070706_102127778	Not Available	507	Open in IMG/M
3300005558\|Ga0066698_10432880	Not Available	900	Open in IMG/M
3300005610\|Ga0070763_10274358	Not Available	920	Open in IMG/M
3300005764\|Ga0066903_104765754	Not Available	722	Open in IMG/M
3300005764\|Ga0066903_108887522	Not Available	509	Open in IMG/M
3300006032\|Ga0066696_10172828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1362	Open in IMG/M
3300006904\|Ga0075424_102287783	Not Available	568	Open in IMG/M
3300009137\|Ga0066709_103631955	Not Available	560	Open in IMG/M
3300010046\|Ga0126384_11524189	Not Available	627	Open in IMG/M
3300010359\|Ga0126376_11728031	Not Available	661	Open in IMG/M
3300010361\|Ga0126378_10361321	Not Available	1562	Open in IMG/M
3300010376\|Ga0126381_102794340	Not Available	697	Open in IMG/M
3300010398\|Ga0126383_10182167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1997	Open in IMG/M
3300010398\|Ga0126383_13650459	Not Available	503	Open in IMG/M
3300011120\|Ga0150983_12952159	Not Available	657	Open in IMG/M
3300012349\|Ga0137387_10460926	Not Available	922	Open in IMG/M
3300012582\|Ga0137358_10814258	Not Available	619	Open in IMG/M
3300012685\|Ga0137397_11199659	Not Available	547	Open in IMG/M
3300012930\|Ga0137407_11693233	Not Available	603	Open in IMG/M
3300016270\|Ga0182036_10241517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1347	Open in IMG/M
3300016270\|Ga0182036_10403596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1065	Open in IMG/M
3300016294\|Ga0182041_11256599	Not Available	676	Open in IMG/M
3300016319\|Ga0182033_11214540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	676	Open in IMG/M
3300016319\|Ga0182033_11690656	Not Available	573	Open in IMG/M
3300016319\|Ga0182033_11696589	Not Available	572	Open in IMG/M
3300016341\|Ga0182035_10216418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1526	Open in IMG/M
3300016341\|Ga0182035_12148902	Not Available	506	Open in IMG/M
3300016357\|Ga0182032_11290079	Not Available	630	Open in IMG/M
3300016371\|Ga0182034_10139725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1803	Open in IMG/M
3300016371\|Ga0182034_10290653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1306	Open in IMG/M
3300016371\|Ga0182034_10414157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1108	Open in IMG/M
3300016371\|Ga0182034_11789250	Not Available	541	Open in IMG/M
3300016371\|Ga0182034_11951052	Not Available	518	Open in IMG/M
3300016404\|Ga0182037_10981189	Not Available	735	Open in IMG/M
3300016404\|Ga0182037_11466318	Not Available	605	Open in IMG/M
3300016422\|Ga0182039_10411039	All Organisms → cellular organisms → Bacteria	1151	Open in IMG/M
3300016445\|Ga0182038_10485915	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1051	Open in IMG/M
3300016445\|Ga0182038_10743464	Not Available	857	Open in IMG/M
3300020583\|Ga0210401_11483617	Not Available	535	Open in IMG/M
3300021178\|Ga0210408_10304699	Not Available	1270	Open in IMG/M
3300021404\|Ga0210389_10621859	Not Available	848	Open in IMG/M
3300021476\|Ga0187846_10340726	Not Available	619	Open in IMG/M
3300021560\|Ga0126371_10258526	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1858	Open in IMG/M
3300021560\|Ga0126371_10502616	Not Available	1360	Open in IMG/M
3300026557\|Ga0179587_10630066	Not Available	706	Open in IMG/M
3300027521\|Ga0209524_1081572	Not Available	680	Open in IMG/M
3300027703\|Ga0207862_1063669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1109	Open in IMG/M
3300027874\|Ga0209465_10583760	Not Available	554	Open in IMG/M
3300029636\|Ga0222749_10331139	Not Available	793	Open in IMG/M
3300031446\|Ga0170820_15944216	Not Available	535	Open in IMG/M
3300031474\|Ga0170818_100359024	Not Available	795	Open in IMG/M
3300031543\|Ga0318516_10155662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1314	Open in IMG/M
3300031543\|Ga0318516_10444726	Not Available	745	Open in IMG/M
3300031544\|Ga0318534_10882788	Not Available	501	Open in IMG/M
3300031546\|Ga0318538_10728964	Not Available	538	Open in IMG/M
3300031561\|Ga0318528_10289436	Not Available	879	Open in IMG/M
3300031572\|Ga0318515_10170947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1161	Open in IMG/M
3300031572\|Ga0318515_10613068	Not Available	578	Open in IMG/M
3300031573\|Ga0310915_10654228	Not Available	743	Open in IMG/M
3300031573\|Ga0310915_11303241	Not Available	500	Open in IMG/M
3300031679\|Ga0318561_10391553	Not Available	763	Open in IMG/M
3300031680\|Ga0318574_10416294	Not Available	785	Open in IMG/M
3300031681\|Ga0318572_10985574	Not Available	501	Open in IMG/M
3300031682\|Ga0318560_10785779	Not Available	514	Open in IMG/M
3300031713\|Ga0318496_10604071	Not Available	606	Open in IMG/M
3300031713\|Ga0318496_10803158	Not Available	518	Open in IMG/M
3300031719\|Ga0306917_10095164	All Organisms → cellular organisms → Bacteria	2125	Open in IMG/M
3300031719\|Ga0306917_11221046	Not Available	583	Open in IMG/M
3300031724\|Ga0318500_10346874	Not Available	733	Open in IMG/M
3300031736\|Ga0318501_10210358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Ancylobacter → Ancylobacter dichloromethanicus	1020	Open in IMG/M
3300031736\|Ga0318501_10436231	Not Available	710	Open in IMG/M
3300031744\|Ga0306918_11288984	Not Available	562	Open in IMG/M
3300031751\|Ga0318494_10268303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	981	Open in IMG/M
3300031751\|Ga0318494_10495649	Not Available	712	Open in IMG/M
3300031764\|Ga0318535_10150128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1038	Open in IMG/M
3300031764\|Ga0318535_10285486	Not Available	738	Open in IMG/M
3300031768\|Ga0318509_10169306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS191	1210	Open in IMG/M
3300031768\|Ga0318509_10472937	Not Available	701	Open in IMG/M
3300031770\|Ga0318521_10140143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1366	Open in IMG/M
3300031770\|Ga0318521_10406392	Not Available	812	Open in IMG/M
3300031771\|Ga0318546_11223923	Not Available	527	Open in IMG/M
3300031779\|Ga0318566_10557087	Not Available	560	Open in IMG/M
3300031782\|Ga0318552_10044592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2085	Open in IMG/M
3300031792\|Ga0318529_10093253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1352	Open in IMG/M
3300031793\|Ga0318548_10178667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1039	Open in IMG/M
3300031793\|Ga0318548_10242501	All Organisms → cellular organisms → Bacteria → Proteobacteria	886	Open in IMG/M
3300031794\|Ga0318503_10049791	Not Available	1274	Open in IMG/M
3300031795\|Ga0318557_10586822	Not Available	511	Open in IMG/M
3300031805\|Ga0318497_10747795	Not Available	548	Open in IMG/M
3300031819\|Ga0318568_10504691	Not Available	754	Open in IMG/M
3300031821\|Ga0318567_10612142	Not Available	618	Open in IMG/M
3300031821\|Ga0318567_10737281	Not Available	559	Open in IMG/M
3300031835\|Ga0318517_10032632	All Organisms → cellular organisms → Bacteria → Proteobacteria	2101	Open in IMG/M
3300031845\|Ga0318511_10457916	Not Available	588	Open in IMG/M
3300031846\|Ga0318512_10278082	Not Available	830	Open in IMG/M
3300031846\|Ga0318512_10333448	Not Available	757	Open in IMG/M
3300031846\|Ga0318512_10662839	Not Available	534	Open in IMG/M
3300031859\|Ga0318527_10065096	Not Available	1451	Open in IMG/M
3300031860\|Ga0318495_10084619	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1421	Open in IMG/M
3300031860\|Ga0318495_10468392	Not Available	552	Open in IMG/M
3300031879\|Ga0306919_10596792	Not Available	852	Open in IMG/M
3300031879\|Ga0306919_10855448	Not Available	698	Open in IMG/M
3300031879\|Ga0306919_10988930	Not Available	643	Open in IMG/M
3300031890\|Ga0306925_11546976	Not Available	647	Open in IMG/M
3300031890\|Ga0306925_11753130	Not Available	597	Open in IMG/M
3300031896\|Ga0318551_10329696	Not Available	862	Open in IMG/M
3300031896\|Ga0318551_10853220	Not Available	530	Open in IMG/M
3300031910\|Ga0306923_10218529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2180	Open in IMG/M
3300031910\|Ga0306923_11088174	Not Available	862	Open in IMG/M
3300031910\|Ga0306923_12088445	Not Available	572	Open in IMG/M
3300031912\|Ga0306921_12371292	Not Available	554	Open in IMG/M
3300031912\|Ga0306921_12404039	Not Available	549	Open in IMG/M
3300031941\|Ga0310912_10426028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1034	Open in IMG/M
3300031942\|Ga0310916_10098647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2344	Open in IMG/M
3300031946\|Ga0310910_10401617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1086	Open in IMG/M
3300031946\|Ga0310910_10787833	Not Available	749	Open in IMG/M
3300031947\|Ga0310909_10469959	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1055	Open in IMG/M
3300031954\|Ga0306926_10434975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1617	Open in IMG/M
3300031954\|Ga0306926_10958719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1021	Open in IMG/M
3300031954\|Ga0306926_11538821	Not Available	766	Open in IMG/M
3300031981\|Ga0318531_10070181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1514	Open in IMG/M
3300032001\|Ga0306922_10326411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1647	Open in IMG/M
3300032009\|Ga0318563_10127462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1358	Open in IMG/M
3300032025\|Ga0318507_10482713	Not Available	539	Open in IMG/M
3300032025\|Ga0318507_10515315	Not Available	520	Open in IMG/M
3300032041\|Ga0318549_10098007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1275	Open in IMG/M
3300032041\|Ga0318549_10212230	Not Available	870	Open in IMG/M
3300032043\|Ga0318556_10419071	Not Available	700	Open in IMG/M
3300032054\|Ga0318570_10533264	Not Available	536	Open in IMG/M
3300032059\|Ga0318533_10357150	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1064	Open in IMG/M
3300032059\|Ga0318533_11239999	Not Available	545	Open in IMG/M
3300032063\|Ga0318504_10339481	Not Available	713	Open in IMG/M
3300032063\|Ga0318504_10660263	Not Available	503	Open in IMG/M
3300032064\|Ga0318510_10078064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1226	Open in IMG/M
3300032068\|Ga0318553_10017567	All Organisms → cellular organisms → Bacteria	3275	Open in IMG/M
3300032090\|Ga0318518_10272446	Not Available	869	Open in IMG/M
3300032091\|Ga0318577_10133315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1177	Open in IMG/M
3300032091\|Ga0318577_10578106	Not Available	534	Open in IMG/M
3300033289\|Ga0310914_10187991	Not Available	1840	Open in IMG/M
3300033289\|Ga0310914_10300570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1447	Open in IMG/M
3300033290\|Ga0318519_10159211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1267	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.35%
Host-Associated	Host-Associated	0.65%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.35%
Plants	Host-Associated → Plants	0.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.70%
Cave	Environmental → Terrestrial → Cave	0.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	92.21%
Loam	Environmental → Terrestrial → Soil → Loam	6.49%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	81.17%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	9.09%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.84%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.95%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.65%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	53.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.97%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.84%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.90%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.30%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.30%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.30%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.65%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.65%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.65%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.65%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.65%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027521	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066395_107251961	3300004633	Tropical Forest Soil	MGLLPVAFIACMNFQPTAADPGAAAPLGIDLGGSGPVIASA
Ga0066388_1041524861	3300005332	Tropical Forest Soil	MTTRLYRPLVMSLAPIALIACMNSAPTIAEEGAAVPLGVDLGGSGPVAARTAPPEEHTYL
Ga0070706_1021277782	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MIARLYRPLVMGLLPIALIACMSPGPTVAEEGAAVPLGVDLGGSGPVTASPEPRAL
Ga0066698_104328802	3300005558	Soil	MITRPYRALAMSLAPLALMACMNSAPKIAEEAAAVPLGIDLGGSGPV
Ga0070763_102743583	3300005610	Soil	MIASLYRPLMIGLLPIALIACMSSGPTVADEGAAAPLGVDLGGSG
Ga0066903_1047657541	3300005764	Tropical Forest Soil	MIPCLYRLLVMGLLPVAFIACMNFQPTAAEPGAAAPLGIDLGGSGPVIASAQ
Ga0066903_1088875221	3300005764	Tropical Forest Soil	MIARLYRPLVTALLPVTLIACMNSPPISAEPSAAVPLGIDLG
Ga0066696_101728283	3300006032	Soil	MTTRLYRLLGMDLLPLALIACVSSGPTGADEGAAVPLGV
Ga0075424_1022877832	3300006904	Populus Rhizosphere	MIAPLYRPLVMGLLPIALIACMSSGPTVAEGGSAVPLGI
Ga0066709_1036319551	3300009137	Grasslands Soil	MIARLYRPLVVGLLPIALIACMTPGPTVAEEGAAVPLGVDLGGSGPVPATAQPRPPARATYAGE
Ga0126384_115241892	3300010046	Tropical Forest Soil	MITRLYRPLVMALLPIALIACMNSPPTSAEPGAAVPLGIDLGSSGPVMIAS
Ga0126376_117280312	3300010359	Tropical Forest Soil	MPAWRISMIARLCRPLVMGLLPVALIACMNSPPTSAEPGAAPPLGIDLGGS
Ga0126378_103613211	3300010361	Tropical Forest Soil	MSLVPVGLTACISSPPVSAEQSAEVPLGIDLGGSGPVIARAQPQLL
Ga0126381_1027943401	3300010376	Tropical Forest Soil	MIVRLYRPLMALLPIALIACTSPGPTVADAGNAPLGVDLGG
Ga0126381_1041384962	3300010376	Tropical Forest Soil	MITRLYRLLAIGSVSIPLLACMNSVPTSTEQNATVPLGIDLG
Ga0126383_101821673	3300010398	Tropical Forest Soil	MIPRFSRLLVIGLLPIAPIACMKSGPMDAEERAAVPLGVDLGG
Ga0126383_136504591	3300010398	Tropical Forest Soil	MIARLYRPLVTALLPITLIACMNSPPTSAEPSAAVPLGIALGGSGPVAASTPAQ
Ga0150983_129521591	3300011120	Forest Soil	MIASLYRPLMIGLLPIALIACMNSGPTVADEGAAVPLG
Ga0137387_104609261	3300012349	Vadose Zone Soil	MIASPYRPLIIGLLPIALIACVSPGPTVAEEGAAVPL
Ga0137358_108142582	3300012582	Vadose Zone Soil	MIARLYRPLVMGLLPIALIACMSPAPTVAEEGAAVPLGVDLGGSGPVAASPQP
Ga0137397_111996591	3300012685	Vadose Zone Soil	MIASLYRPLMIGLLPIALIACMSSGPTVADEAAAVPLGVDLGGSGP
Ga0137407_116932332	3300012930	Vadose Zone Soil	MIARLYRPLVMGLLLIALIACMSPGPTVAEEGAAVPLGVDLGGSGPV
Ga0182036_102415171	3300016270	Soil	MIARLHRPLVMGLLPAALIACVSSPPSLAEQSAAVPLGIDLGGSGPVIASAQPELPARAI
Ga0182036_104035963	3300016270	Soil	MIACFYRPLVMGLLPVALIACMNSPPPSAEPSAAVPLGIDLGGSGPVIA
Ga0182041_101464031	3300016294	Soil	MIARLYRLLAIGSLSIPLLACMNSAPTSTEQSATVPLGIDLGGSGPVIASPR
Ga0182041_112565992	3300016294	Soil	MTARLYRPLVMGLLPIALIACMNSPPTSAEPSATV
Ga0182033_112145401	3300016319	Soil	MIARLYRLLLMGLLAIALIACKNPGPTIAEEDATVPIGIDL
Ga0182033_116906561	3300016319	Soil	MFARLYRLLVMGLLPVALVACMNSLPGSAEPGAAVPLGVDL
Ga0182033_116965892	3300016319	Soil	MIAHLYRPLMMGLLPIALIGCMSSGLTVAEERTVPLGIDLGASGPV
Ga0182033_119078651	3300016319	Soil	MSARLYRPLLMALLPIGLIACMNSAPTVADESAAVPLGID
Ga0182035_102164184	3300016341	Soil	MIARFYRPLVMGLLPVALIACMNSPPPSAEPSAAVPLGIDLG
Ga0182035_121489022	3300016341	Soil	MIARLYRLLVIGVLTIALIACMNSPPTAAESNAAVPLGIDLGGS
Ga0182032_112900792	3300016357	Soil	MIARLHRPLVMGVLPVALIACMNSPRTSAEPSAAVPLGIDLGGSG
Ga0182034_101397251	3300016371	Soil	MIARLHRPLVMGVLPVALIACMNSPRTSAEPSAAVPLGI
Ga0182034_102906534	3300016371	Soil	MIARLYRPLVTGLLPVALIACMNSPPSSAEPGAAAPLGIDLGGSGPVI
Ga0182034_104141573	3300016371	Soil	MIARLYRPLLMGLLSIALIACMNPGPTIAEEDATVPIGIDLGGSGPVIAAAAPEGHAP
Ga0182034_117892501	3300016371	Soil	MNARLYRSLVMGLVPVALIACMNSPPSSAEPGAALPLGIDLGGSGPVIASAP
Ga0182034_119510521	3300016371	Soil	MTARLYRPLVMGLLPIALIACMNSPPTSAEPSATVPLGIDLGGSGPVIASAQPALPAHA
Ga0182037_109811891	3300016404	Soil	MIARFYRPLVMGLLPVALIACMNSPPPSAEPSAAVPLGIDLGGSGPVIAS
Ga0182037_114663182	3300016404	Soil	MIARLSRPLVMGLLPVALIACMNSPPTSAEPSAAV
Ga0182039_104110393	3300016422	Soil	VIVRLYRPLVMGLLPVALIACMNSPPTASAKPDAMVPLGIDLG
Ga0182038_104859151	3300016445	Soil	MNARLYRSLVMGLVPVALIACMNSPPSSAEPGAALPLGIDLGGSGPVI
Ga0182038_107434643	3300016445	Soil	MIARLYRPLVMAFLPAALIACMNSPPTSAEPSAAVPLGIDLGG
Ga0182038_114140792	3300016445	Soil	MIARLYRLLAIGSVSIPLLACMNSAPTSTEQNATVPLGIDLGGSGP
Ga0210401_114836171	3300020583	Soil	MIARLYRPLVMGLLPIALIACMNSAPTVAEEGAVPPLGVDLGGSGPVSTAYA
Ga0210408_103046993	3300021178	Soil	MASLVRPLMIGLLPIALIACMNPAPTVAEEGAAVPLGVDLGGS
Ga0210389_106218592	3300021404	Soil	MIASLYRPLMIGLLPIALIACMSSGPTVADEGAAAPLGVDLGGSGPVAASPQPQI
Ga0187846_103407261	3300021476	Biofilm	MIARLYRPLMIGLLPIALIACINSAPTSANRTPQCR
Ga0126371_102585264	3300021560	Tropical Forest Soil	MIARLYCPLVVGLLPIALIACINSAPTIAEEGAVVPLGIDLGGSGPVTASPPLQPAAYAMHR
Ga0126371_105026163	3300021560	Tropical Forest Soil	MIARLFRCLALGLLPVVLIACMNSPLTSAEAGVGVPLGIDLSGSGPVT
Ga0179587_106300661	3300026557	Vadose Zone Soil	MIAPLYRPFIIGLLPIALIACMSSGPTVADEAAAVPLGVDLGGSGPVAASPQSQ
Ga0209524_10815722	3300027521	Forest Soil	MITRLYRLLVMSLAPIALIACMSSAPTIAEEAAAVPLGID
Ga0207862_10636693	3300027703	Tropical Forest Soil	MIARLYRPLVMGLLPFALFACMNSPPTSAEPSAVPLGIDLGGSGPVIASAHPDI
Ga0209465_105837602	3300027874	Tropical Forest Soil	MITQLYRPLAMNLAPLALIACMNSAPTIAEEAATPVPLGIDLGGSGPVTASPDPPAL
Ga0222749_103311391	3300029636	Soil	MIASLVRPLMIDLLPVALIACMNPAPTVAEEGAAVPLGVDLGGSG
Ga0170820_159442162	3300031446	Forest Soil	MIARLHRPVVMGLLPLALIACMNSPPTSAEPGTAAPLGIDL
Ga0170818_1003590242	3300031474	Forest Soil	MIARLYRPLVMGLLPLALIACMSPAPTVAGEGAAVPL
Ga0318516_101556621	3300031543	Soil	MIARFYRPLVMGLLPVALIACMNSPPPSAEPSAAVPLGIDLGGSGPVIASAQPALAAEAQTA
Ga0318516_104447261	3300031543	Soil	MIARLYRPLLMGLLPLALVSCVSPAPTVAEEGAAVPLGVDLGGSGPVIASPPAPAPSLHAGD
Ga0318534_108827882	3300031544	Soil	MIARLYRPLLMGLLPLALIACVSPAPTVAEEGAAVPLGIDLGGSGPVIASAPS
Ga0318538_107289641	3300031546	Soil	MIARHYRPLVIGLLPTALVACMSLPPTSAEPITAVPLGIDLGGSGPVITSAQSQLPADAI
Ga0318528_102894362	3300031561	Soil	MIARLSRPLVMGLLPVALIACMNSPPTSAEPSAAVPLGIDLGGSGPVIASAHPDIPAHT
Ga0318515_101709473	3300031572	Soil	MIARLYRPLLMGLLSLALIACVNSPPVSAEAGVGVPLGVDLGGSGPVTASPPPPAHEMTAQGEGSSAH
Ga0318515_106130682	3300031572	Soil	MIARLYRFLVMGLLPVALIACTNSLPTSAEPATAV
Ga0310915_106542282	3300031573	Soil	MIARLSRPLVMGLLPVALIACMNSPPTSAEPSAAVPLGIDLG
Ga0310915_113032411	3300031573	Soil	VIVRLYRPLVMGLLPVALIACMNSPPTASVEPDATVPLGIDLGSSGPVIASAQPELTAH
Ga0318561_103915532	3300031679	Soil	MITRLFRSLVMGLLPIALIACMNSPPTAVQSSAAVPLGIDLGGSGQVTAS
Ga0318574_104162942	3300031680	Soil	MIARLYRPLVMALLPVALIACMNSPPTAGEPSAAVPLGIDLGGSGPVIASAQSE
Ga0318574_104376441	3300031680	Soil	MIARFYRPLVMSLIPVGLIACINSPPTYAEPNTAVPLGIDLGGSGPVT
Ga0318572_109855741	3300031681	Soil	MIARFYRPLVMGLLPVALIACMNSLPPSAEPSAAMPLGIDLGGSGPVIA
Ga0318560_107857791	3300031682	Soil	MIARLSRPLVMGLLPVALIACMNSPPTSAEPSAAVPL
Ga0318496_106040711	3300031713	Soil	MIARLYRPLVMGLLPVTLIACMNSPPTSAEPGTAVPLGIDLGGSGPVLTSAQSELPAR
Ga0318496_108031582	3300031713	Soil	MIARLYRPLVMGLLPIALIACMNSPPTSAEPSAAVPLGIDLGGSGPVIASAQPEPPARTVHA
Ga0306917_100951641	3300031719	Soil	MIPRLYRPLVTALLPVTLIACMNSPPTSAEPSAAVPLGIDLGGSG
Ga0306917_112210461	3300031719	Soil	MIARLNRPLVMGLLPVTLIACMNSPPTSAEPGAAVPLGID
Ga0318500_103468741	3300031724	Soil	MIARLYRPLVMAFLPAALIACMNSPPTSAEPSAAVPLGIDLGGSGPVIASAQPALAA
Ga0318501_102103583	3300031736	Soil	MIARLDRPLVIGSLSIALIACMNSAPTSAEQSTAVPLGIDLGGSGPVIASPQPEPPAHTT
Ga0318501_104362311	3300031736	Soil	MIARLSRPLVMGLLPVALIACMNSPPTSAEPSAAVPLGIDLGGSGPVIASAHPDIPAHTI
Ga0306918_112889841	3300031744	Soil	MIARLYRALVMALLPAALIACMNSPPTSAEPGAAVPLGIDLGGSGPVIAS
Ga0318494_102683032	3300031751	Soil	MIARLSRPLVMGLLPVALIACMNSPPTSAEPSAAVPLGIDLGGSGPV
Ga0318494_104956492	3300031751	Soil	MIARLYRPLVMGLLPIALIACMNSPPTSAEPSAAVPLGIDLGGSGPVIASAQPEPPARTI
Ga0318494_108550572	3300031751	Soil	MIARFYRPLVMSLIPVGLIACVNSPPTYAEPNTAVPLGIDLGGSGPVTARLQP
Ga0318535_101501283	3300031764	Soil	MIARLYRPLAMGLLSITLIACMNSPPSSAEPGAAVPLGID
Ga0318535_102854862	3300031764	Soil	MIARLYRPLVTGLLPVALIACMNSPSSSAEPGAAAPLGIDLGGSGPVIASAQP
Ga0318554_101267001	3300031765	Soil	MIARLYRLLAIGSVSIPLLACMNSAPTSTEQNATVPLGIDLGGSGPVIAS
Ga0318509_101693061	3300031768	Soil	MIARHYRPLVIGLLPTALIACMSLPPTSAEPITAVPLGIDLGGSGPVIASAQSQLPADAI
Ga0318509_104729371	3300031768	Soil	MFARLCRLLVMGLLPVALVACMNSPPGSAEPGTAVPLGIDLGGSGPVIA
Ga0318521_101401431	3300031770	Soil	MIARLHRPLVMGVLPVALIACMNSPRTSAEPSAAVPLGIDLGGSGPVIASAQP
Ga0318521_104063921	3300031770	Soil	MIARLFRPLLVGLLPLALIACMSPAPTVAEEGAAVPPGVDLGGSGPVIASAPAPAPP
Ga0318546_112239231	3300031771	Soil	MIARLYRPLVMGLLPIALIACMNSPPTSAEPSAAVPLGIDLGGSGPVIASAQPEPPARTV
Ga0318566_105570872	3300031779	Soil	MIARLFRPLLVGLLPLALIACMSPAPTVAEEGAAVPPGVDLGG
Ga0318552_100445923	3300031782	Soil	MIARLYRPLVTGLLPVALIACMNSPPSSAEPGAAAPLGIDLGGSGPVIASAQPALSAR
Ga0318529_100932531	3300031792	Soil	MIPRLYRTLVMALLPVTLLACMNSPPTAAEPGAPVPLGIDLGGSGPVIASAQPALPAPI
Ga0318548_101786673	3300031793	Soil	MIACFYRPLVMGLLPVALIACMNSPPPSAEPSAAVPL
Ga0318548_102425011	3300031793	Soil	MIARLYRLLVMGLLPVALIACTNSPPTSAEPRAAAPL
Ga0318503_100497913	3300031794	Soil	MIARLFRPLLMSLVPFGLIACMNSPPTSAESSAAVPLGIDLGGSGPVT
Ga0318557_105868221	3300031795	Soil	MIARLYRPLAMGLLSITLIACMNSPPSSAEPGAAVPLGIDLGGSG
Ga0318497_107477951	3300031805	Soil	MIARLYRPLVTGLLPVALIACMNSPPTSAEPGAGVPLGIDLGGSGPVIASAQPELPAHVI
Ga0318568_105046911	3300031819	Soil	MIARLYRPLVTGLLPVALIACMNSPPSSAEPGAAAPLGIDLGGSGPVIASAQPALSARV
Ga0318567_106121423	3300031821	Soil	MIARLHRPLVMGVLPVALIACMNSPRTSAEPSAAVPLGIDLG
Ga0318567_107372812	3300031821	Soil	MIARLFRPLLMSLVPFGLIACMNSPPTSAESSAAVPLGIDLGGSGQVT
Ga0318517_100326324	3300031835	Soil	MNARLYRSLVMGLVPVALIACMNSPPSSAEPGAALPLGIDLGGSGPVIASAPPELPA
Ga0318511_104579162	3300031845	Soil	MIARLHRPLVMGVLPVALIACMNSPRTSAEPSAAVPLGIDLGGSGPVIASVQPGLPARAK
Ga0318512_102780821	3300031846	Soil	MIARLYRPLVMGLLPIALIACMNSPPTSAEPSAAVPLGID
Ga0318512_103334481	3300031846	Soil	MIARLYRPLVTGLLPVALIACMNSPPTSAEPGAGVPLG
Ga0318512_106628392	3300031846	Soil	MIARLYRPLVMGLLPVALIACMNSPPTSAEPSAAVPLGIDLGGSGPVVATAAPAA
Ga0318527_100650961	3300031859	Soil	MIARLDRPLVIGSLSIALIACMNSAPTSAEQSTAVPLGIDLGGSGPVIASPQPEPPAH
Ga0318495_100846194	3300031860	Soil	MIARLYRPLAMGLLSITLIACMNSPPSSAEPGAAVPLGIDLGGSGPVIASAQPDLPPRA
Ga0318495_104683922	3300031860	Soil	MIARLYRPLVMGLLPFALFACMNSPPTSAEPNAAVPLGIDLGGSGPVIASAQPELPARAI
Ga0306919_105967921	3300031879	Soil	MIARLCRPLVMGLLPVALIACMNSPPTSAEPSASVPL
Ga0306919_108554481	3300031879	Soil	MISRLYRPLVMGLLPVALIACMNSPPTAGEPSAAVPLGIDLGGSGTV
Ga0306919_109889303	3300031879	Soil	MIARLYRPLLMGLLPLALVSCVSPAPTVAEEGAAVPLGIDLG
Ga0306925_115469763	3300031890	Soil	MIARLYRPLLMGLLPLALVSCVSPAPTVAEEGAAVPLGIDLGGSGPVIASPPAPAPSL
Ga0306925_117531302	3300031890	Soil	MIARLYRPLVTGLLPVALIACMNSPPTSAEPSAAVPVGIDL
Ga0318551_103296964	3300031896	Soil	MIARLYRPLVMGLLPIVLIACMNSPPTSAEPSAAVPLGIDLGGSGP
Ga0318551_108532201	3300031896	Soil	MTARLYRPLVMGLLPIALIACMNSPPTSAEPSATVPLGIDLGGSGPVIASAQPALP
Ga0306923_102185294	3300031910	Soil	MIVRLYRPLVMGLLPVALIACMNSPPTSAEPSASVPLGIDL
Ga0306923_110881742	3300031910	Soil	MIARLYRPLVTGLLPVALIACMNSPPTSAEPGAGVPLGIDLGGSGPVIASAQPELPAHV
Ga0306923_120884452	3300031910	Soil	MIARLYRPLLMGLLPVALIACMNSPPTSAEPSTAVPL
Ga0306921_123712922	3300031912	Soil	MIARLCRPLVMGLLPVALIGCMNSPPTSAELSAAVPLGID
Ga0306921_124040392	3300031912	Soil	MIARHYRPLVIGLLPTALVACMSLPPTSAEPITAVPLGIDLGGSGPVIASAQSQ
Ga0310912_104260281	3300031941	Soil	MIARLYRPLAMGLLSITLIACMNSPPSSAEPGAAVPLGIDLGGSGPVIAS
Ga0310916_100986471	3300031942	Soil	MTARVLRPLVMSLAPIALIACVNSTATVAEEDSAVPLGVDLGGSGPVAAHAAPTENH
Ga0310910_104016173	3300031946	Soil	MIARLFRPLLVGLLPLALIACMSPAPTVAEEGAAVPPGVDLGGSGPVIASAPAPAPPVLH
Ga0310910_107878331	3300031946	Soil	MIARLYRLLVIGVLTIALIACMNSPPTAAESNAAVPLGIDLGGSGPV
Ga0310909_104699593	3300031947	Soil	MIARLCRPLVMGLLPVALIGCMNSPPTSAELSAAVPLGIDLGGSG
Ga0306926_104349754	3300031954	Soil	MIARLYRPLVTGLLPVALIACMNSPPTSAEPSAAVPVGIDLGGSGPVIAS
Ga0306926_109587193	3300031954	Soil	MIARLSRPLVMGLLPVALIACMNSPPTSAEPSAAVPLGID
Ga0306926_115388212	3300031954	Soil	MIARLYRPLVMGLLPVALLACMNSPPTSAEPSAAVPLGI
Ga0318531_100701811	3300031981	Soil	MIARFYRPLVMGLLPVALIACMNSLPPSAEPSAAMPLGIDLGGSG
Ga0306922_103264114	3300032001	Soil	MIARLFRPLLVGLLPLALIACMSPAPTVAEEGAAVPPGVDLGGSGPVIASAPAPAPPVQQ
Ga0318563_101274624	3300032009	Soil	MIARLYRPLVTGLLPVALIACMNSPPTSAEPGAAVPLGIDLG
Ga0318507_104827132	3300032025	Soil	MIARLYRPLVMGLLPVALIACMNSPPTAGEPSAAVPLGIDLGGSG
Ga0318507_105153152	3300032025	Soil	MIARLYRPLVMALLPAALISCRNSPPTSAEPSAAVPLGVDLGG
Ga0318549_100980073	3300032041	Soil	MIARLYRPLAMGLLSITLIACMNSPPSSAEPGAAVPLGIDLGGSGPVIASAQPDLPPRAI
Ga0318549_102122303	3300032041	Soil	MIARLYRPLVMAFLPAALIACMNSPPTSAEPSAAVPLGIDLGGSGPVIASAQPAL
Ga0318556_104190712	3300032043	Soil	MIARLYRLLVIGLLPIALIACMNSPPTAAESNAAVPLGIDLGSSGPV
Ga0318558_105807452	3300032044	Soil	MSARLYRPLLMALLPIGLIACMNSAPTVADESAAVPLGIDLGGSGPVTAAAPAEGHAP
Ga0318570_105332641	3300032054	Soil	MFARLYRLLVMGLLPVALVACMNSLPGSAEPGAAV
Ga0318533_103571503	3300032059	Soil	MIARLYRPLLMGLLSLALIACVNSPPVSAEAGVGVPLGVDLGGSGPV
Ga0318533_112399992	3300032059	Soil	VIVRLYRPLVMGLLPVALIACMNSPPTASVEPDATVPLGIDLGSSGPVIASAQP
Ga0318504_103394812	3300032063	Soil	MIARFYRLLLTALLPVTLIACMNSPPTSAEPSAAVPLGIDLGGSGPVAASSPA
Ga0318504_106602632	3300032063	Soil	MITRLFRSLVMGLLPIALIACMNSPPTAVQSSAAVPLGIDLGGSGQVTASPSPRLPADAM
Ga0318510_100780641	3300032064	Soil	MIARLYRPLLMGLLPLALVSCVSPAPTVAEEGAAVPLGVDLGGSGPVIASPPA
Ga0318514_100764211	3300032066	Soil	MIARLDRPLVIGSLSIALIACMNSAPTSAEQSTAVPLG
Ga0318553_100175675	3300032068	Soil	MIARLYRPLVMAFLPAALIACMNSPPTSAEPSAAVPLGIDLGGSGPVI
Ga0318553_100760874	3300032068	Soil	MIARLDRPLVIGSLSIALIACMNSAPTSAEQSTAVPLGIDLGGSG
Ga0318518_102724463	3300032090	Soil	MIALLYRPLVMGLLPIVLIACMNSPPTSAEPSAAVPLGIDLGSSGPVIASAQPELPRSMP
Ga0318577_101333153	3300032091	Soil	MIARLYRLLVIGLLPIALIACMNSPPTAAESNAAVPLGIDLG
Ga0318577_105781061	3300032091	Soil	MIARFYRPLLMSLIPLGLIACINFPPTYAEPNTAAPLGIDLGGSGPAT
Ga0306920_1030771392	3300032261	Soil	MITRLYRLLAIGSVSIPLLACMNSAPTSTEQNATVPLGI
Ga0310914_101879911	3300033289	Soil	MIALLYRPLVMGLLPIVLIACMNSPPTSAEPSAAVPLGIDLGSSGPVIASAQ
Ga0310914_103005704	3300033289	Soil	MIACFYRPLVMGLLPVALIACMNSPPTSAEPSAAVPLGIDLGGSGPVIAN
Ga0318519_101592111	3300033290	Soil	MIARLYRPLVTGLLPVALIACMNSPPSSAEPGAAAPLGIDLGGSGPVIASAQPALSA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F044330

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences