Metagenome / Metatranscriptome Family F044109

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F044109
Family Type	Metagenome / Metatranscriptome
Number of Sequences	155
Average Sequence Length	43 residues
Representative Sequence	AVGEEYMVERTISVHEDLPALAANLFKLRHKLLEIAGWQGE
Number of Associated Samples	130
Number of Associated Scaffolds	155

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	14.19 %
% of genes near scaffold ends (potentially truncated)	86.45 %
% of genes from short scaffolds (< 2000 bps)	83.23 %
Associated GOLD sequencing projects	120
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (92.903 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil (18.710 % of family members)
Environment Ontology (ENVO)	Unclassified (23.871 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (65.161 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.52% β-sheet: 0.00% Coil/Unstructured: 43.48%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 155 Family Scaffolds
PF13545	HTH_Crp_2	4.52
PF05239	PRC	4.52
PF07690	MFS_1	2.58
PF00072	Response_reg	1.94
PF08281	Sigma70_r4_2	1.29
PF04909	Amidohydro_2	1.29
PF06745	ATPase	1.29
PF13340	DUF4096	1.29
PF06114	Peptidase_M78	1.29
PF10017	Methyltransf_33	0.65
PF05974	DUF892	0.65
PF12762	DDE_Tnp_IS1595	0.65
PF03575	Peptidase_S51	0.65
PF02310	B12-binding	0.65
PF01272	GreA_GreB	0.65
PF01594	AI-2E_transport	0.65
PF06823	DUF1236	0.65
PF00813	FliP	0.65
PF02272	DHHA1	0.65
PF00817	IMS	0.65
PF08241	Methyltransf_11	0.65
PF12850	Metallophos_2	0.65
PF00487	FA_desaturase	0.65
PF07813	LTXXQ	0.65
PF05973	Gp49	0.65
PF13442	Cytochrome_CBB3	0.65
PF01047	MarR	0.65
PF04545	Sigma70_r4	0.65
PF13542	HTH_Tnp_ISL3	0.65
PF09849	DUF2076	0.65
PF01425	Amidase	0.65
PF04542	Sigma70_r2	0.65
PF01555	N6_N4_Mtase	0.65
PF04392	ABC_sub_bind	0.65
PF11752	DUF3309	0.65
PF04120	Iron_permease	0.65
PF00583	Acetyltransf_1	0.65
PF03734	YkuD	0.65
PF17167	Glyco_hydro_36	0.65
PF05717	TnpB_IS66	0.65
PF13439	Glyco_transf_4	0.65
PF13602	ADH_zinc_N_2	0.65
PF06035	Peptidase_C93	0.65
PF04966	OprB	0.65
PF03729	DUF308	0.65
PF13565	HTH_32	0.65
PF00665	rve	0.65
PF00982	Glyco_transf_20	0.65
PF03448	MgtE_N	0.65
PF01227	GTP_cyclohydroI	0.65
PF12706	Lactamase_B_2	0.65
PF13581	HATPase_c_2	0.65
PF09913	DUF2142	0.65

COG ID	Name	Functional Category	% Frequency in 155 Family Scaffolds
COG3678	Periplasmic chaperone Spy, Spy/CpxP family	Posttranslational modification, protein turnover, chaperones [O]	2.58
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.65
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.65
COG4679	Phage-related protein gp49, toxin component of the Tad-Ata toxin-antitoxin system	Defense mechanisms [V]	0.65
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.65
COG3685	Ferritin-like metal-binding protein YciE	Inorganic ion transport and metabolism [P]	0.65
COG3672	Predicted transglutaminase-like protein	Posttranslational modification, protein turnover, chaperones [O]	0.65
COG3659	Carbohydrate-selective porin OprB	Cell wall/membrane/envelope biogenesis [M]	0.65
COG3657	Putative component of the toxin-antitoxin plasmid stabilization module	Defense mechanisms [V]	0.65
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.65
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.65
COG3247	Acid resistance membrane protein HdeD, DUF308 family	General function prediction only [R]	0.65
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	0.65
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	0.65
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.65
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.65
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.65
COG2239	Mg/Co/Ni transporter MgtE (contains CBS domain)	Inorganic ion transport and metabolism [P]	0.65
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	0.65
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.65
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	0.65
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.65
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.65
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	0.65
COG0863	DNA modification methylase	Replication, recombination and repair [L]	0.65
COG0782	Transcription elongation factor, GreA/GreB family	Transcription [K]	0.65
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	0.65
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.65
COG0389	Nucleotidyltransferase/DNA polymerase DinP involved in DNA repair	Replication, recombination and repair [L]	0.65
COG0380	Trehalose-6-phosphate synthase, GT20 family	Carbohydrate transport and metabolism [G]	0.65

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.90 %
Unclassified	root	N/A	7.10 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.90 %
Unclassified	root	N/A	7.10 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.90 %
Unclassified	root	N/A	7.10 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	82.58 %
Unclassified	root	N/A	7.10 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.65 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	76.77 %
Unclassified	root	N/A	7.10 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.65 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.65 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	15.48 %
Unclassified	root	N/A	7.10 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2.58 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.94 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.65 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.65 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	10.32 %
Unclassified	root	N/A	7.10 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1.94 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.94 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.65 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	0.65 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.65 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	10.32 %
Unclassified	root	N/A	7.10 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1.94 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.94 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.65 %
Geobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	0.65 %
Massilia group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group	0.65 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	7.10 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	2.58 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1.94 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.94 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.65 %
Massilia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia	0.65 %
Geobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter	0.65 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.65 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	7.10 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	2.58 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1.94 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.94 %
unclassified Geobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter → unclassified Geobacter	0.65 %
unclassified Massilia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia → unclassified Massilia	0.65 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.65 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.65 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	7.10 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	2.58 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1.94 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.94 %
Massilia sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia → unclassified Massilia → Massilia sp.	0.65 %
Geobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter → unclassified Geobacter → Geobacter sp.	0.65 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.65 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.65 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.65 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001383\|JGI20194J14741_1003268	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter → unclassified Geobacter → Geobacter sp.	2309	Open in IMG/M
3300001402\|JGI20195J14853_1003279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5105	Open in IMG/M
3300001402\|JGI20195J14853_1013286	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1842	Open in IMG/M
3300001412\|JGI20173J14856_1017403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1204	Open in IMG/M
3300001545\|JGI12630J15595_10032127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1082	Open in IMG/M
3300001661\|JGI12053J15887_10060810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2099	Open in IMG/M
3300001867\|JGI12627J18819_10057722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1617	Open in IMG/M
3300002245\|JGIcombinedJ26739_100289261	All Organisms → cellular organisms → Bacteria → Proteobacteria	1523	Open in IMG/M
3300003505\|JGIcombinedJ51221_10216697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	777	Open in IMG/M
3300004080\|Ga0062385_10272311	All Organisms → cellular organisms → Bacteria → Proteobacteria	956	Open in IMG/M
3300004080\|Ga0062385_10731017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	641	Open in IMG/M
3300004082\|Ga0062384_100642295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	724	Open in IMG/M
3300004092\|Ga0062389_101012117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1016	Open in IMG/M
3300004635\|Ga0062388_101076307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	787	Open in IMG/M
3300005176\|Ga0066679_10749769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	628	Open in IMG/M
3300005439\|Ga0070711_101517740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	585	Open in IMG/M
3300005542\|Ga0070732_10276802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1006	Open in IMG/M
3300005591\|Ga0070761_10108575	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1604	Open in IMG/M
3300005591\|Ga0070761_10447047	Not Available	793	Open in IMG/M
3300005993\|Ga0080027_10333891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	606	Open in IMG/M
3300006028\|Ga0070717_10173958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1874	Open in IMG/M
3300006028\|Ga0070717_11062149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	737	Open in IMG/M
3300006055\|Ga0097691_1002561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12027	Open in IMG/M
3300006086\|Ga0075019_10157910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1328	Open in IMG/M
3300006162\|Ga0075030_100046971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3620	Open in IMG/M
3300006173\|Ga0070716_100479849	All Organisms → cellular organisms → Bacteria → Proteobacteria	913	Open in IMG/M
3300006174\|Ga0075014_100666945	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	601	Open in IMG/M
3300006175\|Ga0070712_100055964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2765	Open in IMG/M
3300006358\|Ga0068871_101330177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	676	Open in IMG/M
3300006638\|Ga0075522_10002024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	15229	Open in IMG/M
3300006638\|Ga0075522_10288625	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300006642\|Ga0075521_10132233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia → unclassified Massilia → Massilia sp.	1163	Open in IMG/M
3300006844\|Ga0075428_100196639	All Organisms → cellular organisms → Bacteria → Proteobacteria	2180	Open in IMG/M
3300006880\|Ga0075429_100591022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	973	Open in IMG/M
3300006880\|Ga0075429_101734672	Not Available	542	Open in IMG/M
3300006893\|Ga0073928_10893211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	609	Open in IMG/M
3300006949\|Ga0075528_10090365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	803	Open in IMG/M
3300007265\|Ga0099794_10674177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	550	Open in IMG/M
3300009137\|Ga0066709_101664103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	908	Open in IMG/M
3300009176\|Ga0105242_13170585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	510	Open in IMG/M
3300009762\|Ga0116130_1162923	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300010046\|Ga0126384_11194850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	701	Open in IMG/M
3300010343\|Ga0074044_10151168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1553	Open in IMG/M
3300010360\|Ga0126372_10966345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	860	Open in IMG/M
3300010376\|Ga0126381_104253009	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	555	Open in IMG/M
3300010379\|Ga0136449_101581572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	997	Open in IMG/M
3300010398\|Ga0126383_10833729	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300010400\|Ga0134122_13390165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	502	Open in IMG/M
3300010880\|Ga0126350_10400682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	751	Open in IMG/M
3300011120\|Ga0150983_13010365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	553	Open in IMG/M
3300011120\|Ga0150983_13301255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	669	Open in IMG/M
3300011270\|Ga0137391_10335454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1300	Open in IMG/M
3300011415\|Ga0137325_1041437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	963	Open in IMG/M
3300012019\|Ga0120139_1076150	Not Available	823	Open in IMG/M
3300012096\|Ga0137389_11027801	Not Available	706	Open in IMG/M
3300012200\|Ga0137382_10939195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	622	Open in IMG/M
3300012202\|Ga0137363_10181355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1677	Open in IMG/M
3300012205\|Ga0137362_11151205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	659	Open in IMG/M
3300012205\|Ga0137362_11481454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	565	Open in IMG/M
3300012359\|Ga0137385_11084715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	659	Open in IMG/M
3300012361\|Ga0137360_10175000	Not Available	1721	Open in IMG/M
3300012361\|Ga0137360_11281343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	633	Open in IMG/M
3300012362\|Ga0137361_10225935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1699	Open in IMG/M
3300012362\|Ga0137361_11786463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	533	Open in IMG/M
3300012683\|Ga0137398_10175789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1402	Open in IMG/M
3300012918\|Ga0137396_11103417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	567	Open in IMG/M
3300012922\|Ga0137394_11343243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	577	Open in IMG/M
3300012957\|Ga0164303_10445955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	813	Open in IMG/M
3300012960\|Ga0164301_11671778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	531	Open in IMG/M
3300012989\|Ga0164305_10042553	All Organisms → cellular organisms → Bacteria	2596	Open in IMG/M
3300013766\|Ga0120181_1015684	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2025	Open in IMG/M
3300014200\|Ga0181526_10462464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	804	Open in IMG/M
3300014490\|Ga0182010_10383680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	764	Open in IMG/M
3300014501\|Ga0182024_10248426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2388	Open in IMG/M
3300014501\|Ga0182024_11794186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	687	Open in IMG/M
3300014501\|Ga0182024_11795185	All Organisms → cellular organisms → Bacteria → Proteobacteria	686	Open in IMG/M
3300014502\|Ga0182021_11463281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	823	Open in IMG/M
3300014638\|Ga0181536_10028253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4256	Open in IMG/M
3300014823\|Ga0120170_1107198	Not Available	562	Open in IMG/M
3300015242\|Ga0137412_11136019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	551	Open in IMG/M
3300015245\|Ga0137409_10370802	All Organisms → cellular organisms → Bacteria	1244	Open in IMG/M
3300016341\|Ga0182035_12092923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	514	Open in IMG/M
3300017946\|Ga0187879_10247242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	994	Open in IMG/M
3300018030\|Ga0187869_10347125	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	711	Open in IMG/M
3300018044\|Ga0187890_10274140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	948	Open in IMG/M
3300018061\|Ga0184619_10028155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2352	Open in IMG/M
3300018076\|Ga0184609_10037755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2017	Open in IMG/M
3300019786\|Ga0182025_1035404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	599	Open in IMG/M
3300019888\|Ga0193751_1048330	Not Available	1849	Open in IMG/M
3300020579\|Ga0210407_10499386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	951	Open in IMG/M
3300020582\|Ga0210395_11029041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	609	Open in IMG/M
3300020582\|Ga0210395_11099377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	587	Open in IMG/M
3300020583\|Ga0210401_11551802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	519	Open in IMG/M
3300021178\|Ga0210408_10299653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1282	Open in IMG/M
3300021178\|Ga0210408_10729270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	779	Open in IMG/M
3300021178\|Ga0210408_10844602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	715	Open in IMG/M
3300021180\|Ga0210396_11710592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	511	Open in IMG/M
3300021405\|Ga0210387_10039229	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3770	Open in IMG/M
3300021418\|Ga0193695_1013788	All Organisms → cellular organisms → Bacteria	1645	Open in IMG/M
3300021432\|Ga0210384_10403156	Not Available	1232	Open in IMG/M
3300021432\|Ga0210384_11191906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	666	Open in IMG/M
3300021432\|Ga0210384_11870506	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	506	Open in IMG/M
3300021474\|Ga0210390_10009668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7896	Open in IMG/M
3300021510\|Ga0222621_1007064	Not Available	2033	Open in IMG/M
3300022712\|Ga0242653_1066625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	612	Open in IMG/M
3300022731\|Ga0224563_1002787	All Organisms → cellular organisms → Bacteria	1148	Open in IMG/M
3300025314\|Ga0209323_10628838	All Organisms → cellular organisms → Bacteria → Proteobacteria	600	Open in IMG/M
3300025324\|Ga0209640_10365048	All Organisms → cellular organisms → Bacteria	1196	Open in IMG/M
3300025457\|Ga0208850_1004850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	2894	Open in IMG/M
3300025457\|Ga0208850_1052753	Not Available	673	Open in IMG/M
3300025475\|Ga0208478_1041903	Not Available	883	Open in IMG/M
3300025484\|Ga0208587_1016424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2457	Open in IMG/M
3300025484\|Ga0208587_1028127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1624	Open in IMG/M
3300025505\|Ga0207929_1094028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	561	Open in IMG/M
3300025527\|Ga0208714_1093229	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	601	Open in IMG/M
3300025544\|Ga0208078_1002096	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5135	Open in IMG/M
3300025544\|Ga0208078_1015129	All Organisms → cellular organisms → Bacteria	1783	Open in IMG/M
3300025544\|Ga0208078_1120100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	524	Open in IMG/M
3300025579\|Ga0207927_1015942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2401	Open in IMG/M
3300025604\|Ga0207930_1113904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	607	Open in IMG/M
3300025650\|Ga0209385_1098487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	952	Open in IMG/M
3300025664\|Ga0208849_1003564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7392	Open in IMG/M
3300025725\|Ga0209638_1076851	All Organisms → cellular organisms → Bacteria	1251	Open in IMG/M
3300025829\|Ga0209484_10061091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	833	Open in IMG/M
3300025852\|Ga0209124_10048584	All Organisms → cellular organisms → Bacteria	1764	Open in IMG/M
3300025852\|Ga0209124_10202735	All Organisms → cellular organisms → Bacteria → Proteobacteria	783	Open in IMG/M
3300025862\|Ga0209483_1078725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1482	Open in IMG/M
3300025862\|Ga0209483_1221292	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300026354\|Ga0257180_1026083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	778	Open in IMG/M
3300026377\|Ga0257171_1058412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	671	Open in IMG/M
3300026482\|Ga0257172_1070802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	640	Open in IMG/M
3300026496\|Ga0257157_1036678	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	814	Open in IMG/M
3300026557\|Ga0179587_11132983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	515	Open in IMG/M
3300027625\|Ga0208044_1042900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1479	Open in IMG/M
3300027729\|Ga0209248_10043699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1382	Open in IMG/M
3300027737\|Ga0209038_10035237	All Organisms → cellular organisms → Bacteria	1490	Open in IMG/M
3300027829\|Ga0209773_10017835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2766	Open in IMG/M
3300027842\|Ga0209580_10390159	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	694	Open in IMG/M
3300027889\|Ga0209380_10574718	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	654	Open in IMG/M
3300027903\|Ga0209488_10045026	All Organisms → cellular organisms → Bacteria	3243	Open in IMG/M
3300027903\|Ga0209488_10840036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	648	Open in IMG/M
3300028673\|Ga0257175_1129017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	507	Open in IMG/M
3300028708\|Ga0307295_10168829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	612	Open in IMG/M
3300028906\|Ga0308309_10169023	All Organisms → cellular organisms → Bacteria	1775	Open in IMG/M
3300030580\|Ga0311355_11749529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	529	Open in IMG/M
3300031057\|Ga0170834_100132171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	598	Open in IMG/M
3300031128\|Ga0170823_11557266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	543	Open in IMG/M
3300031344\|Ga0265316_10330643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1106	Open in IMG/M
3300031525\|Ga0302326_10312810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2500	Open in IMG/M
3300031708\|Ga0310686_106869336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2120	Open in IMG/M
3300031708\|Ga0310686_116373056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	585	Open in IMG/M
3300031715\|Ga0307476_10630085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	795	Open in IMG/M
3300031912\|Ga0306921_11601696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	708	Open in IMG/M
3300032076\|Ga0306924_10922585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	964	Open in IMG/M
3300033233\|Ga0334722_11287231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	511	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.13%
Host-Associated	Host-Associated	3.87%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.29%
Aquatic	Environmental → Aquatic	14.84%
Plants	Host-Associated → Plants	3.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.00%
Freshwater	Environmental → Aquatic → Freshwater	9.68%
Sediment	Environmental → Aquatic → Sediment	4.52%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.23%
Peat	Environmental → Terrestrial → Peat	1.29%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.65%
Roots	Host-Associated → Plants → Roots	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	63.87%
Loam	Environmental → Terrestrial → Soil → Loam	10.97%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	9.03%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.16%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.58%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.29%
Lake	Environmental → Aquatic → Freshwater → Lake	0.65%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.65%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.65%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.81%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	20.65%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	16.13%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	8.39%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.10%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.52%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.52%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.23%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.58%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.29%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.29%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.65%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.65%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.65%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.65%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.65%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	18.71%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.81%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	5.16%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.52%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.23%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.58%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	2.58%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.58%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.94%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.94%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.94%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.94%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.29%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.29%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.29%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.29%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.29%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	1.29%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.29%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.65%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.65%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.65%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.65%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.65%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.65%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.65%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.65%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.65%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.65%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.65%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001383	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 shallow-092012	Environmental	Open in IMG/M
3300001402	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-092012	Environmental	Open in IMG/M
3300001412	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012	Environmental	Open in IMG/M
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006055	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006949	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost159B-16B	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009762	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011415	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT469_2	Environmental	Open in IMG/M
3300012019	Permafrost microbial communities from Nunavut, Canada - A7_5cm_12M	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013766	Permafrost microbial communities from Nunavut, Canada - A26_65cm_6M	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300014823	Permafrost microbial communities from Nunavut, Canada - A3_80cm_0M	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021418	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300022712	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022731	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU4	Environmental	Open in IMG/M
3300025314	Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 2	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025457	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025475	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025484	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025505	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025527	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025544	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025579	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025604	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025650	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B (SPAdes)	Environmental	Open in IMG/M
3300025664	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025725	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-211 (SPAdes)	Environmental	Open in IMG/M
3300025829	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost159B-16B (SPAdes)	Environmental	Open in IMG/M
3300025852	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-22A (SPAdes)	Environmental	Open in IMG/M
3300025862	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A (SPAdes)	Environmental	Open in IMG/M
3300026354	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-B	Environmental	Open in IMG/M
3300026377	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-B	Environmental	Open in IMG/M
3300026482	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-B	Environmental	Open in IMG/M
3300026496	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-A	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027625	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028673	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-B	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20194J14741_10032683	3300001383	Arctic Peat Soil	MVERTIIIHQDLPVLAANSLKLRHKPLEIAGRQGA*
JGI20195J14853_10032791	3300001402	Arctic Peat Soil	HHRDDTAIGEEDMVERTISVHENLPALAANVFKLRHKSLEIAGWQGK*
JGI20195J14853_10132861	3300001402	Arctic Peat Soil	YMVERTIIIHQDLPVLAANSLKLRHKPLEIAGRQGA*
JGI20173J14856_10174033	3300001412	Arctic Peat Soil	AVRINRYHRDYTAVWEEYMVERTIGVHENLLALAANLFKLRHKLLEIAGWQGE*
JGI12630J15595_100321273	3300001545	Forest Soil	MGEEDMVERTISVQENLLALAANVLKLRHESLEIAGWQGK*
JGI12053J15887_100608104	3300001661	Forest Soil	VRIDRHRRDNTAVGEEYMIERTICVHQDLFALAVYLFKLPHKLLEIRR*
JGI12627J18819_100577221	3300001867	Forest Soil	NDAAICVNRHHRDDTGIGEEDMIERTISVHRDLLAFAAYVFKLRHDLLEIGGWQGQ*
JGIcombinedJ26739_1002892614	3300002245	Forest Soil	MIERTISVHQDLFAFAAYLFKLWHKLLXIGGWQSK*
JGIcombinedJ51221_102166971	3300003505	Forest Soil	VDRHHRDDTAIGEEYMVERTISVHQDLPALAGNAFKLWHKPLEIAGRKGK*
Ga0062385_102723111	3300004080	Bog Forest Soil	VRINRHRRDDTAVGEEYMIEGTVSVHQDLFAFTAYLCKLQQLKLLEIRGWQGEQKPIAGPV*
Ga0062385_107310171	3300004080	Bog Forest Soil	RDDTAVGEEYMVERSISVHEDLRALAGNVFKLPHKPFEIAGR*
Ga0062384_1006422952	3300004082	Bog Forest Soil	NAVCINRHRQDDTAVGEEYAIERTITVHQDLFAVAAYLFKLRHKLLEIGGWQGE*
Ga0062389_1010121171	3300004092	Bog Forest Soil	HRDDTAVGEEYMVERTISVHKDLPAMAANVFKLRHKLLEIRGWQVE*
Ga0062388_1010763071	3300004635	Bog Forest Soil	DAAVGEEYMIERTISVHQDQFALATDLFKLREKLLDIGGWQCQQ*
Ga0066679_107497691	3300005176	Soil	EHIVERTIGIHQDLLALAGNMLKFRQELLEIAGWQGEQEAIAGPI*
Ga0070711_1015177401	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	GEEDMVERTISVHENLPALAANVLELRHESLESTGWQGQ*
Ga0070732_102768022	3300005542	Surface Soil	MVERTIGVQEDLPALAANMFKVRHEPLEIAGWQGE*
Ga0070761_101085753	3300005591	Soil	GEEYMVERTISVHQDLCAFAVYLFKLRRKPLEIGGWQGE*
Ga0070761_104470472	3300005591	Soil	MVERTISVHKDLPAMAANVFKLRHKLLEIGGWQGE
Ga0080027_103338911	3300005993	Prmafrost Soil	REEYMIERTIGVHQDLLAFAANVFKLRHKPLEIAGWQGQ*
Ga0070717_101739586	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	RINRHHRDDTAVGEEYMVERTVSVHQDLPALAAYLFKLRHKLFEIAGWQGEEKPVAGPI*
Ga0070717_110621491	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	HRDDTAIGEEDMVERTISVHENLLALAANVLKLRHESLKIAGWQGK*
Ga0097691_100256122	3300006055	Arctic Peat Soil	VRINRHHRDYTAVGEKYMVERTVSVGENLLALAANLFELRHKLLEIAGWQGE*
Ga0075019_101579103	3300006086	Watersheds	EEYMVERTVGVHEDLPAMAANLFKLRHKLLEIAGRQGE*
Ga0075030_1000469718	3300006162	Watersheds	HHRDNTAIGEVDVVERTVSIHEDLPALAADLFELRHESLEIAGWQGK*
Ga0070716_1004798492	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VRIDRHYRDDTAIGEVYVVERTISIHEDLPALAMNLFKLRHEPLEIGGWQGE*
Ga0075014_1006669453	3300006174	Watersheds	VEWTIGIHQNLPAFAAYLFKLRHKLLEIGGGQGK*
Ga0070712_1000559644	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	NRHRRDDTAIGKEYMVEWTISVHQDLLAFAVDVFKLRHKLLEIRGWQRE*
Ga0068871_1013301772	3300006358	Miscanthus Rhizosphere	IGEKYLIERTISVHEDLASLAANMFKLRHQSLEIAGWQGK*
Ga0075522_1000202418	3300006638	Arctic Peat Soil	MVERTISVHEDLLALAANVFKLRHKPLEIAGWKGE*
Ga0075522_102886251	3300006638	Arctic Peat Soil	MSSSEANMVERTISVHENLLALAENMFKLWHESLEIAGWQSQ*
Ga0075521_101322332	3300006642	Arctic Peat Soil	YHRDYTAVWEEDMVERTVGIHEDLSVLAANLFKLWHKLLEIAGWQGE*
Ga0075428_1001966395	3300006844	Populus Rhizosphere	DMVERTISVHEDLPALATNVFQLRHESLEIAGWQGK*
Ga0075429_1005910223	3300006880	Populus Rhizosphere	GEEYMVERTVSVHQDLPTLAWNLFKLRHKPLEIAGWQSE*
Ga0075429_1017346721	3300006880	Populus Rhizosphere	AERTVGVDQDLLAFAGNLFKLRHELLEIAGWQGE*
Ga0073928_108932112	3300006893	Iron-Sulfur Acid Spring	INRHHRDDTAIGEEDMIERTISVHQDLLAFAAYVFKLRHDLLEVGGWQGQ*
Ga0075528_100903651	3300006949	Arctic Peat Soil	YVVERTISVHQNLLALAANVFKLWHEPLEIAGWQSK*
Ga0099794_106741772	3300007265	Vadose Zone Soil	AIGKEYMVKWTISVHQDLLAFAADVFKLRHKLLEIGGWQGE*
Ga0066709_1016641031	3300009137	Grasslands Soil	CRHDTAVGEKYMVERTIRIHQNLFAFAAYLFKPRHKLLEIGGWQGE*
Ga0105242_131705852	3300009176	Miscanthus Rhizosphere	RDDTAIGEEYMVERTISVYENLFASAANVFKLRHESLQVAGWEGK*
Ga0116130_11629231	3300009762	Peatland	DHGDDTAIWEKDMVERPISVHKDLSALAADLFQLRHESLEIAGWQGK*
Ga0126384_111948501	3300010046	Tropical Forest Soil	EEYVIERIIGVHQDLFPFIAYLFKFRHQLLKIGRWQGK*
Ga0074044_101511683	3300010343	Bog Forest Soil	MVERTISIHQDLPAVAAYLLKLRHKLLEIGGWQGE*
Ga0126372_109663452	3300010360	Tropical Forest Soil	RDDTAVEEEYAIERTISVHQDLFAVAAYLFKLRHKLLEIEGWQGE*
Ga0126381_1042530092	3300010376	Tropical Forest Soil	RRNDTAIGKEYMVKRTIGVHQDLRAFAAYGFKLRHKLLEIGAWQSE*
Ga0136449_1015815721	3300010379	Peatlands Soil	RDDTAVGEEYMVERTVGIHQNLTAFARYLLKLRHKLLEIGGGQGE*
Ga0126383_108337292	3300010398	Tropical Forest Soil	DTAIREEYIVERTIGIHQDLLALAANMLKFRQKLPEIAGRQGE*
Ga0134122_133901651	3300010400	Terrestrial Soil	MAVRVNCNYRDDPAIGEEDMLERTVSVHENLLGLAANVFELRHKPL
Ga0126350_104006821	3300010880	Boreal Forest Soil	MVERTVGVHQDLRAFAANAFKLRHKLPEVGGWQGQ*
Ga0150983_130103651	3300011120	Forest Soil	HTAIGEEYMVERTISVHQDLRALAANLFKLRHKPLKIAGGQR*
Ga0150983_133012552	3300011120	Forest Soil	RINRHRRDDTAVGEEYMVERTISVHQDLGAFTMYMFKLRHKLLEIGGWQSE*
Ga0137391_103354542	3300011270	Vadose Zone Soil	VERTISVHENLLALAANVFKLWHEPLEIAGWKGEQ*
Ga0137325_10414371	3300011415	Soil	TAVREEHMVERTIGVHEDLPALAANLFKVWHKPLEIGGWQGE*
Ga0120139_10761501	3300012019	Permafrost	YMVERPIIIHQDLPVLAANSLKLRHKPLEIAGWQGA*
Ga0137389_110278012	3300012096	Vadose Zone Soil	IGEEDMVERTISVHQDLPALAWNVFKLRHKQLEIAGWKGE*
Ga0137382_109391951	3300012200	Vadose Zone Soil	EDIVDRAISVQQDLLALAANVFKLQHKSLQIAGWQGE*
Ga0137363_101813554	3300012202	Vadose Zone Soil	MVERTISVHQDLLAVAGDVFKMRHKPPQIAGRQSE*
Ga0137362_111512051	3300012205	Vadose Zone Soil	DTAVGEKYMVERTIGIHQNLFAFAAYLFKPRHKLLEIGGWQGE*
Ga0137362_114814541	3300012205	Vadose Zone Soil	NGATVGVNGHDRDDTAIREEYIVERTIGIHQDLLALAANMLKFRQKLLEIAGWQGE*
Ga0137385_110847151	3300012359	Vadose Zone Soil	AIGQEYMVERTISVDQKLPALAWNVFKLRQNLLEIAGWQGE*
Ga0137360_101750001	3300012361	Vadose Zone Soil	YMIERTISIHQDLFAFAAYLFKLRYKLVEIGGWQGE*
Ga0137360_112813432	3300012361	Vadose Zone Soil	GEEYMIERTISIHQDLFAFAVYVFQLRHKLLEIGGWQGE*
Ga0137361_102259351	3300012362	Vadose Zone Soil	INRHRRDDTAVGEEYMIERTISIHQDLFAFAAYLFKLRYKLLEIGGWQGE*
Ga0137361_117864632	3300012362	Vadose Zone Soil	DRCHLNDAAVCINRHRRDDTTIGKEYMVKWTISVHQDLLAFAVDVFKLRHKLLEIGGWQGE*
Ga0137398_101757892	3300012683	Vadose Zone Soil	DDTAIREEYIVERTIGIHQDLLALAANGLKFRQKLLEIAGWQGE*
Ga0137396_111034171	3300012918	Vadose Zone Soil	INRYHRDYTAVWEEYMVERTVGVHEDLPALAANLFKLRHKLFEIAGWQGE*
Ga0137394_113432432	3300012922	Vadose Zone Soil	TIGEEYMVERTISVHQDLLAAAGNALKVRHKPLEIAGRQSE*
Ga0164303_104459552	3300012957	Soil	EEYMVERTISVHQDLRPLAANVFKLRHESIEIAGWQGK*
Ga0164301_116717782	3300012960	Soil	RDDTAIGEEYMVERTIGVHQDLRAMAADVFKLRHKPLEISGGQRE*
Ga0164305_100425533	3300012989	Soil	MVERTISVHEHLPTVAANVLKLWHESLEIAGWQGK*
Ga0120181_10156843	3300013766	Permafrost	EEDMVERTIIIHQDLSVLAANSLQLRHKPLEIAGWQGE*
Ga0181526_104624642	3300014200	Bog	GEEYMVERTISIHQDLLALAANVFKLRQKPLEIGGWQGE*
Ga0182010_103836802	3300014490	Fen	EEYIVERTVSVHEDLLALAANLFELRHKLLEIAGWQGE*
Ga0182024_102484261	3300014501	Permafrost	IDRHHRDHTAIWKEDMVERTVSVHEDLLAMATNVFKLRQNPLEIADWKGE*
Ga0182024_117941861	3300014501	Permafrost	RDHTAIGEEDMVERTISVHEDLLALAANVFELRHKPLEIAGWQGQ*
Ga0182024_117951851	3300014501	Permafrost	DRHHRDDTVVGEEYMVERAIGVQEDLPAVAANLFKLRHKPLEIGGWQGK*
Ga0182021_114632811	3300014502	Fen	TAVGEEYIVERTVSVHEDLLALAANVFELRHKPLEIAGWKGE*
Ga0181536_100282534	3300014638	Bog	DDAVVGEVYMVERTVSVHQDLPASAGNLFKLRHEPLEIGGWQGE*
Ga0120170_11071981	3300014823	Permafrost	NIVERAIDVQQDLTFLAGNLFKLRHKPLEIALWQSE*
Ga0137412_111360191	3300015242	Vadose Zone Soil	AVRINRYHRDYTAVWEEYMVERTVGVHEDLPALAANLFKLRHKLFEIAGWQGE*
Ga0137409_103708022	3300015245	Vadose Zone Soil	RHCGDDTAVGEEYMIERTISIQQDLFAFAAYLFKLRQKLLEIRRWQGE*
Ga0182035_120929232	3300016341	Soil	HRRDDTAVEEEYAIERTISVHQDLFAVAAYLFKLRHKLLEIGGWQGE
Ga0187879_102472422	3300017946	Peatland	VGEEYMVERTISIHQDLLALAANVFKLRQKPLEIGGWQGE
Ga0187869_103471251	3300018030	Peatland	RHNRDDTTVGEEYMADRTISVHKDLFALAANVLKLRHKLLEIGGWQGQ
Ga0187890_102741401	3300018044	Peatland	MVERTISVHEDLLALAANVFKLRHEPLEIAGWQGQ
Ga0184619_100281552	3300018061	Groundwater Sediment	MVERTISVHENLIALAANVFKLRHELLEIAGWQGN
Ga0184609_100377554	3300018076	Groundwater Sediment	AIGKEYMVERTIGVHQDLPALAWNVFKLRQKLLEIAGWQRE
Ga0182025_10354041	3300019786	Permafrost	EKYMVERTVGVHEDLLALAANVFELRHKPLEIAGWKGE
Ga0193751_10483303	3300019888	Soil	IGEVDMVERTIGVHENLPALAENVLKLWHEPFEFTGWKGEK
Ga0210407_104993861	3300020579	Soil	MVKWTISVHQDLLAFTVDVFKLRHKLLEIRGWQRE
Ga0210395_110290411	3300020582	Soil	EKEDMIERTVSVHQDLLAFAAYVFGLRHDLLEIGGRQGQ
Ga0210395_110993771	3300020582	Soil	NNTAIREKDMVERTISLHENLRAAARNALKLRHEPLQIGGWQSEQ
Ga0210401_115518021	3300020583	Soil	NRHRRDDTAVGEVYLVERTISIHQDLPAFAGYLLQLRHKLPEIGGWQGE
Ga0210408_102996531	3300021178	Soil	RDNRDDTAIGEIDMVERTISVHENLPALAGNVLKLWHQELEIAGWQGK
Ga0210408_107292701	3300021178	Soil	RRYRDDTAIEKEDMIERTVSVHQDLLAFAAYVFGLRHDLLEIGGRQGQ
Ga0210408_108446022	3300021178	Soil	TVVGEEYMVERTISIHQDPPAFASYLLKLRHKLLEIGGRQGA
Ga0210396_117105921	3300021180	Soil	DRWHLNDTAVRINRHRRDDTAVGEVYLVERTISIHQDLPAFAGYLLQLRHKLPEIGGWQG
Ga0210387_100392291	3300021405	Soil	MVERTISIHQDLPAFAAYLLKLRHKLLETGGWQGE
Ga0193695_10137881	3300021418	Soil	MSLERTIRIHQDLFAFAAYLFKLRHKLVKIGGWKGK
Ga0210384_104031561	3300021432	Soil	DTAIGEEYMVERTISVHEDLPAQAGNLFKLRHEALEIAGWKGKQ
Ga0210384_111919062	3300021432	Soil	YVVERTISVHQDLLALAAYLLKLRHKLLEIGGWQGE
Ga0210384_118705062	3300021432	Soil	RRDDTAVGEEYVIERTISVHQDLFAFTAYLFKLRHKLLEIAGWQGE
Ga0210390_100096682	3300021474	Soil	MVKRTISVHQDLPAVAAYLFNLRHQPFEIEGWQGE
Ga0222621_10070641	3300021510	Groundwater Sediment	NTAIGEEDMVERTISVHENLIALAANVFKLRHELLEIAGWQGN
Ga0242653_10666252	3300022712	Soil	INRHRRDDTAVGEVYLVERTISIHQDLPAFAGYLLQLRHKLPEIGGWQGE
Ga0224563_10027872	3300022731	Soil	RRDDTAVGEEYMVERTISVHQDLCAFAAYLFKLRHKPLEIGEGQGK
Ga0209323_106288381	3300025314	Soil	NRDHRDDTAIREEYMVERTIGVHQDLPALAVNLFKLRQKLLEIAGWQGE
Ga0209640_103650483	3300025324	Soil	RINCHRRDDTAIGEEYMVERTVSVHEDLPAVAANLFKLRHEPLEIAGWEGE
Ga0208850_10048502	3300025457	Arctic Peat Soil	MVERTISVHEDLLALAANVFKLRHKPLEIAGWKGE
Ga0208850_10527531	3300025457	Arctic Peat Soil	GEEDMVDRTISIHKDLPVLAANLFKLRHKPLEITGWQGE
Ga0208478_10419031	3300025475	Arctic Peat Soil	DHTAIGEEDMVERTVNVHEDLLALAANVFKLRHKPLEIAGWKGQ
Ga0208587_10164244	3300025484	Arctic Peat Soil	HRYDTAIREEYVVERTISVQQNLLAFAANLFKLWHESLEIAGWQGK
Ga0208587_10281271	3300025484	Arctic Peat Soil	RDYTAVGEEYMVERTVSVHEDLLALAANLFKLRHKLLEIAGWQGE
Ga0207929_10940281	3300025505	Arctic Peat Soil	MSSSEANMVERTISVHENLLALAENMFKLWHESLEIAGWQSQ
Ga0208714_10932291	3300025527	Arctic Peat Soil	NRYHRDYTAVWEEYMVERTVGVHEDLSALAANLFKLRHKLLEIAGWQGE
Ga0208078_10020968	3300025544	Arctic Peat Soil	YVVERTISVQQNLLAFAANLFKLWHESLEIAGSQG
Ga0208078_10151291	3300025544	Arctic Peat Soil	YVVERTISVQQNLLAFAANLFKLWHESLEIAGWQGK
Ga0208078_11201001	3300025544	Arctic Peat Soil	HRDYTAVWEEYMVEQTVGVHEDLLALAPNLFKLRPKLLEIAGW
Ga0207927_10159421	3300025579	Arctic Peat Soil	YMVERTVGVHEDLRALAANLFKLRHKLLEIAGWQGE
Ga0207930_11139041	3300025604	Arctic Peat Soil	AIGEEDMVERTVSVQEDLLALAANVFKLRHKPLEIAGWKGQ
Ga0209385_10984872	3300025650	Arctic Peat Soil	HRRDHTAIGEEDMVERTVSVHEDLLALAANVFKLRHKPLEIAGWKGQ
Ga0208849_10035642	3300025664	Arctic Peat Soil	MVERTISVHENLLALAENMFKLWHESLEIAGWQSQ
Ga0209638_10768511	3300025725	Arctic Peat Soil	EEDMVERTVSVHEDLLALAANVFKLRHKPLEIAGWKGQ
Ga0209484_100610913	3300025829	Arctic Peat Soil	YVVERTISVHQNLLALAANVFKLWHEPLEIAGWQSK
Ga0209124_100485842	3300025852	Arctic Peat Soil	EEYMVERTIIIHQDLPVLAANSLKLRHKPLEIAGRQGA
Ga0209124_102027351	3300025852	Arctic Peat Soil	SGKKYMVRTVSVGENLLALAANLFELRHKLLEIAGWQGE
Ga0209483_10787254	3300025862	Arctic Peat Soil	VGEEHMIERTISVHQDLLALAANVFKLRHESLEIAGWQGE
Ga0209483_12212922	3300025862	Arctic Peat Soil	MSSSEANMVERTISVHENLLALAENMFKLWHESLEIAGRQSQ
Ga0257180_10260831	3300026354	Soil	MIERTISIHQDLFAFAAYLFKLRHKLLEIGGWQGE
Ga0257171_10584122	3300026377	Soil	HRDDTAIGEVDMVERTISVHENLPALAENVLKLWHQELEIAGWQGKKKSIAGPI
Ga0257172_10708021	3300026482	Soil	RHRRDDTAIGKEYMVKWTISVHQDLLAFAVDVFKLRHKLLEIRGWQRE
Ga0257157_10366781	3300026496	Soil	CHLNDAAVCINRHRRDDTAIGKEYMVKWTISVHQDLLAFAVDVFKLRHKLLEIRGWQRE
Ga0179587_111329831	3300026557	Vadose Zone Soil	AIGEEDMVERTISVREDLPALAADLLKLRHESFEIAGCQGK
Ga0208044_10429004	3300027625	Peatlands Soil	INRHHRDDTAVGEEHVVERTVGVHQDLAPVAANLFKLRQKPLEIGGRQGKQKTITRPI
Ga0209248_100436993	3300027729	Bog Forest Soil	TAVGEEYAIERTITVHQDLFAVAAYLFKLRHKLLEIGGWQGE
Ga0209038_100352371	3300027737	Bog Forest Soil	DDTAVRVNRYRRNDTAVGEEYMIERTIGVHQDLFAFATYLFKLRDKLLQIGGR
Ga0209773_100178352	3300027829	Bog Forest Soil	MIERTIGVHQDLFAVAADLFKLRDKLLEIGGRQGE
Ga0209580_103901592	3300027842	Surface Soil	MTPLSGKNMVERTIGVQEDLPALAANMFKVRHEPLEIAGWQGE
Ga0209380_105747181	3300027889	Soil	WEEYMVERTIGVHQDLPALAGNVFKLRHKPLEVAGGQGK
Ga0209488_100450263	3300027903	Vadose Zone Soil	MVKWTISVHQDLLAFAVDVFKLRHKLLEIRGWQRE
Ga0209488_108400361	3300027903	Vadose Zone Soil	GEEDMVERTISVHQHLPAVAANVLKLRHESLEIAGWQGK
Ga0257175_11290172	3300028673	Soil	MIERTISIHQDLFAFAAYLFKLRYKLLEIGGWQGE
Ga0307295_101688291	3300028708	Soil	DVAVRIDRDHRDNTAIGEEDMVERTISVHENLIALAANVFKLRHELLEIAGWQGN
Ga0308309_101690231	3300028906	Soil	RDDTAMGEKDMVERTISVHENLPALAANVFKLRHELLEIAGRQGK
Ga0311355_117495291	3300030580	Palsa	MVERAICVHEDPRALAANVFKLRHKPLEIAGRQSEQK
Ga0170834_1001321712	3300031057	Forest Soil	GAEYVVERTISVHQDLRAFAAYLFKLRHKLLEIGGWQGE
Ga0170823_115572661	3300031128	Forest Soil	AVGEEYMIERTISIHQDLFAFAAYLFKLRHKLLEIRRWQGE
Ga0265316_103306432	3300031344	Rhizosphere	MVERTVGIHEDLSALAANLFKLWHKLLEIAGWQGE
Ga0302326_103128107	3300031525	Palsa	EDMVERTVGIHQDLAALAKNMFKFWHELLEIGGGHGE
Ga0310686_1068693364	3300031708	Soil	NRHHRDDTAVGEEYMFERAIGVHQDLLAFAAYPFKLWHKLLEIRRWQSK
Ga0310686_1163730562	3300031708	Soil	AVRINRDHRDNTAVAEINMVERTISLHENLPALAANVLQLWHESFEIAGWQGN
Ga0307476_106300851	3300031715	Hardwood Forest Soil	RDNTAVGKEYMVKRTISVHQDLPAFAAYLFNLRHQLFEIDGWQGE
Ga0306921_116016962	3300031912	Soil	AAVRINRHRRDDTTVGEEYIIERTICIQQDLFAFAAYLFKLRDKLRKIGGWQGE
Ga0306924_109225852	3300032076	Soil	HRRDDTTVGEEYIIERTICIQQDLFAFAAYLFKLRDKLRKIGGWQGE
Ga0334722_112872312	3300033233	Sediment	AVGEEYMVERTISVHEDLPALAANLFKLRHKLLEIAGWQGE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F044109

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences