Metagenome / Metatranscriptome Family F044086

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F044086
Family Type	Metagenome / Metatranscriptome
Number of Sequences	155
Average Sequence Length	58 residues
Representative Sequence	MSDTMDRLGQTDEDIFVPKYSDEDLEAAVGNPQAFPTFTCSQPMCATGGGCGTWPGN
Number of Associated Samples	99
Number of Associated Scaffolds	155

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	63.23 %
% of genes near scaffold ends (potentially truncated)	16.13 %
% of genes from short scaffolds (< 2000 bps)	74.84 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.26

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (63.226 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (25.161 % of family members)
Environment Ontology (ENVO)	Unclassified (40.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (77.419 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 8.24% β-sheet: 0.00% Coil/Unstructured: 91.76%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.26
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.26
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 155 Family Scaffolds
PF01656	CbiA	30.97
PF05128	DUF697	4.52
PF13505	OMP_b-brl	1.94
PF13474	SnoaL_3	1.29
PF13614	AAA_31	1.29
PF01757	Acyl_transf_3	1.29
PF08240	ADH_N	1.29
PF03330	DPBB_1	1.29
PF00211	Guanylate_cyc	0.65
PF10604	Polyketide_cyc2	0.65
PF02445	NadA	0.65
PF01381	HTH_3	0.65
PF02776	TPP_enzyme_N	0.65
PF13563	2_5_RNA_ligase2	0.65
PF05930	Phage_AlpA	0.65
PF00210	Ferritin	0.65
PF00768	Peptidase_S11	0.65
PF01709	Transcrip_reg	0.65
PF07238	PilZ	0.65
PF14659	Phage_int_SAM_3	0.65
PF05598	DUF772	0.65
PF04070	DUF378	0.65
PF10722	YbjN	0.65
PF06411	HdeA	0.65
PF00149	Metallophos	0.65
PF04471	Mrr_cat	0.65
PF13356	Arm-DNA-bind_3	0.65
PF03401	TctC	0.65
PF13481	AAA_25	0.65

COG ID	Name	Functional Category	% Frequency in 155 Family Scaffolds
COG3768	Uncharacterized membrane protein YcjF, UPF0283 family	Function unknown [S]	4.52
COG0217	Transcriptional and/or translational regulatory protein YebC/TACO1	Translation, ribosomal structure and biogenesis [J]	0.65
COG0379	Quinolinate synthase	Coenzyme transport and metabolism [H]	0.65
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.65
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.65
COG2155	Uncharacterized membrane protein YuzA, DUF378 family	Function unknown [S]	0.65
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.65
COG3311	DNA-binding transcriptional regulator AlpA	Transcription [K]	0.65

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	63.23 %
Unclassified	root	N/A	36.77 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	63.23 %
Unclassified	root	N/A	36.77 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	63.23 %
Unclassified	root	N/A	36.77 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	57.42 %
Unclassified	root	N/A	36.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.77 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	24.52 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.65 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.77 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	20.00 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.65 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.65 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.65 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.77 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6.45 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	1.29 %
Stappiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae	0.65 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	0.65 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.65 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.65 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.77 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.52 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1.29 %
Dokdonella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dokdonella	0.65 %
Roseibium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae → Roseibium	0.65 %
Brevundimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas	0.65 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.65 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.77 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.29 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1.29 %
Dokdonella immobilis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dokdonella → Dokdonella immobilis	0.65 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.65 %
unclassified Roseibium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae → Roseibium → unclassified Roseibium	0.65 %
Bradyrhizobium australafricanum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium australafricanum	0.65 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.65 %
Brevundimonas diminuta	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas → Brevundimonas diminuta	0.65 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.65 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.77 %
Bradyrhizobium sp. AUGA SZCCT0283	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	1.29 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1.29 %
Roseibium sp. TrichSKD4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae → Roseibium → unclassified Roseibium → Roseibium sp. TrichSKD4	0.65 %
Dokdonella immobilis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dokdonella → Dokdonella immobilis	0.65 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.65 %
Bradyrhizobium australafricanum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium australafricanum	0.65 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.65 %
Brevundimonas diminuta	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas → Brevundimonas diminuta	0.65 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.65 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.65 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10006576	All Organisms → cellular organisms → Bacteria → Proteobacteria	8066	Open in IMG/M
3300000567\|JGI12270J11330_10010505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6172	Open in IMG/M
3300001182\|JGI12668J13544_1004836	All Organisms → cellular organisms → Bacteria → Proteobacteria	731	Open in IMG/M
3300001593\|JGI12635J15846_10084735	Not Available	2310	Open in IMG/M
3300004082\|Ga0062384_100406025	All Organisms → cellular organisms → Bacteria → Proteobacteria	879	Open in IMG/M
3300005435\|Ga0070714_100646874	Not Available	1017	Open in IMG/M
3300005538\|Ga0070731_10039253	All Organisms → cellular organisms → Bacteria → Proteobacteria	3179	Open in IMG/M
3300005591\|Ga0070761_10207747	All Organisms → cellular organisms → Bacteria → Proteobacteria	1162	Open in IMG/M
3300005602\|Ga0070762_10251795	All Organisms → cellular organisms → Bacteria → Proteobacteria	1098	Open in IMG/M
3300005610\|Ga0070763_10141199	All Organisms → cellular organisms → Bacteria → Proteobacteria	1250	Open in IMG/M
3300005712\|Ga0070764_10263188	All Organisms → cellular organisms → Bacteria → Proteobacteria	985	Open in IMG/M
3300005712\|Ga0070764_10319554	Not Available	900	Open in IMG/M
3300005921\|Ga0070766_10166049	All Organisms → cellular organisms → Bacteria → Proteobacteria	1361	Open in IMG/M
3300005921\|Ga0070766_10177268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1321	Open in IMG/M
3300005921\|Ga0070766_10366946	Not Available	937	Open in IMG/M
3300005921\|Ga0070766_10466306	Not Available	835	Open in IMG/M
3300005921\|Ga0070766_10836071	All Organisms → cellular organisms → Bacteria → Proteobacteria	628	Open in IMG/M
3300005994\|Ga0066789_10414767	Not Available	562	Open in IMG/M
3300006050\|Ga0075028_101035216	Not Available	512	Open in IMG/M
3300006086\|Ga0075019_10452597	Not Available	791	Open in IMG/M
3300006174\|Ga0075014_100380603	All Organisms → cellular organisms → Bacteria → Proteobacteria	765	Open in IMG/M
3300006175\|Ga0070712_100544052	All Organisms → cellular organisms → Bacteria → Proteobacteria	978	Open in IMG/M
3300006176\|Ga0070765_100200042	Not Available	1812	Open in IMG/M
3300006176\|Ga0070765_100548372	All Organisms → cellular organisms → Bacteria → Proteobacteria	1088	Open in IMG/M
3300006176\|Ga0070765_100578366	All Organisms → cellular organisms → Bacteria → Proteobacteria	1058	Open in IMG/M
3300006176\|Ga0070765_100835007	Not Available	871	Open in IMG/M
3300006176\|Ga0070765_101987619	Not Available	544	Open in IMG/M
3300006176\|Ga0070765_102036823	Not Available	537	Open in IMG/M
3300006893\|Ga0073928_10271601	Not Available	1287	Open in IMG/M
3300009520\|Ga0116214_1152883	All Organisms → cellular organisms → Bacteria → Proteobacteria	860	Open in IMG/M
3300009521\|Ga0116222_1007813	All Organisms → cellular organisms → Bacteria → Proteobacteria	5139	Open in IMG/M
3300009525\|Ga0116220_10342921	All Organisms → cellular organisms → Bacteria → Proteobacteria	662	Open in IMG/M
3300009525\|Ga0116220_10470676	Not Available	568	Open in IMG/M
3300009824\|Ga0116219_10049480	All Organisms → cellular organisms → Bacteria → Proteobacteria	2495	Open in IMG/M
3300009839\|Ga0116223_10452646	Not Available	751	Open in IMG/M
3300009839\|Ga0116223_10673621	Not Available	595	Open in IMG/M
3300009839\|Ga0116223_10726613	Not Available	569	Open in IMG/M
3300010379\|Ga0136449_100125772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	5127	Open in IMG/M
3300010379\|Ga0136449_100307092	All Organisms → cellular organisms → Bacteria → Proteobacteria	2886	Open in IMG/M
3300010398\|Ga0126383_11115544	Not Available	878	Open in IMG/M
3300014159\|Ga0181530_10058646	All Organisms → cellular organisms → Bacteria	2468	Open in IMG/M
3300014159\|Ga0181530_10552259	Not Available	568	Open in IMG/M
3300014162\|Ga0181538_10102878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1680	Open in IMG/M
3300014164\|Ga0181532_10043990	All Organisms → cellular organisms → Bacteria	2988	Open in IMG/M
3300014164\|Ga0181532_10607388	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300014489\|Ga0182018_10089866	Not Available	1812	Open in IMG/M
3300014489\|Ga0182018_10134537	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1422	Open in IMG/M
3300014489\|Ga0182018_10584577	Not Available	587	Open in IMG/M
3300014501\|Ga0182024_10006790	All Organisms → cellular organisms → Bacteria	24948	Open in IMG/M
3300014501\|Ga0182024_10006843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	24847	Open in IMG/M
3300014501\|Ga0182024_10015274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	14728	Open in IMG/M
3300014501\|Ga0182024_10040431	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dokdonella → Dokdonella immobilis	7688	Open in IMG/M
3300014501\|Ga0182024_10483159	All Organisms → cellular organisms → Bacteria	1579	Open in IMG/M
3300014638\|Ga0181536_10255003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	837	Open in IMG/M
3300014657\|Ga0181522_10089783	All Organisms → cellular organisms → Bacteria → Proteobacteria	1766	Open in IMG/M
3300014657\|Ga0181522_10943451	Not Available	533	Open in IMG/M
3300016750\|Ga0181505_11126070	Not Available	580	Open in IMG/M
3300017938\|Ga0187854_10429300	Not Available	552	Open in IMG/M
3300017946\|Ga0187879_10415232	Not Available	746	Open in IMG/M
3300018020\|Ga0187861_10286036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	710	Open in IMG/M
3300018026\|Ga0187857_10084436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1563	Open in IMG/M
3300020021\|Ga0193726_1000026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	411624	Open in IMG/M
3300020580\|Ga0210403_10342916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1223	Open in IMG/M
3300020581\|Ga0210399_10385555	All Organisms → cellular organisms → Bacteria	1169	Open in IMG/M
3300020582\|Ga0210395_10008970	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7499	Open in IMG/M
3300020583\|Ga0210401_10298484	Not Available	1472	Open in IMG/M
3300021088\|Ga0210404_10243413	Not Available	976	Open in IMG/M
3300021170\|Ga0210400_10210229	Not Available	1584	Open in IMG/M
3300021170\|Ga0210400_11049747	Not Available	661	Open in IMG/M
3300021171\|Ga0210405_10035250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3994	Open in IMG/M
3300021171\|Ga0210405_10079052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2592	Open in IMG/M
3300021178\|Ga0210408_10000006	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	359301	Open in IMG/M
3300021178\|Ga0210408_10388845	All Organisms → cellular organisms → Bacteria → Proteobacteria	1111	Open in IMG/M
3300021180\|Ga0210396_10145843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2127	Open in IMG/M
3300021180\|Ga0210396_10212060	All Organisms → cellular organisms → Bacteria	1728	Open in IMG/M
3300021181\|Ga0210388_10483972	Not Available	1087	Open in IMG/M
3300021402\|Ga0210385_10770720	All Organisms → cellular organisms → Bacteria → Proteobacteria	737	Open in IMG/M
3300021402\|Ga0210385_11070108	All Organisms → cellular organisms → Bacteria → Proteobacteria	619	Open in IMG/M
3300021403\|Ga0210397_11141929	All Organisms → cellular organisms → Bacteria → Proteobacteria	605	Open in IMG/M
3300021404\|Ga0210389_10482582	Not Available	975	Open in IMG/M
3300021405\|Ga0210387_10078811	All Organisms → cellular organisms → Bacteria → Proteobacteria	2713	Open in IMG/M
3300021405\|Ga0210387_10778728	Not Available	846	Open in IMG/M
3300021405\|Ga0210387_11352525	Not Available	614	Open in IMG/M
3300021406\|Ga0210386_10529350	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1019	Open in IMG/M
3300021406\|Ga0210386_11130828	Not Available	664	Open in IMG/M
3300021406\|Ga0210386_11334166	Not Available	603	Open in IMG/M
3300021407\|Ga0210383_10173297	Not Available	1840	Open in IMG/M
3300021420\|Ga0210394_10233778	All Organisms → cellular organisms → Bacteria → Proteobacteria	1607	Open in IMG/M
3300021474\|Ga0210390_10296527	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium australafricanum	1369	Open in IMG/M
3300021474\|Ga0210390_11317454	All Organisms → cellular organisms → Bacteria → Proteobacteria	578	Open in IMG/M
3300021475\|Ga0210392_10470956	All Organisms → cellular organisms → Bacteria → Proteobacteria	923	Open in IMG/M
3300021477\|Ga0210398_10047886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3520	Open in IMG/M
3300021477\|Ga0210398_10200768	All Organisms → cellular organisms → Bacteria → Proteobacteria	1625	Open in IMG/M
3300021477\|Ga0210398_10218870	All Organisms → cellular organisms → Bacteria → Proteobacteria	1551	Open in IMG/M
3300021477\|Ga0210398_10783011	Not Available	769	Open in IMG/M
3300021478\|Ga0210402_11124490	Not Available	713	Open in IMG/M
3300021478\|Ga0210402_11317993	Not Available	649	Open in IMG/M
3300021479\|Ga0210410_10018363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6043	Open in IMG/M
3300021479\|Ga0210410_10572498	Not Available	1005	Open in IMG/M
3300022557\|Ga0212123_10061450	All Organisms → cellular organisms → Bacteria → Proteobacteria	3321	Open in IMG/M
3300022557\|Ga0212123_10198771	Not Available	1489	Open in IMG/M
3300022557\|Ga0212123_10789576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	572	Open in IMG/M
3300022881\|Ga0224545_1042292	Not Available	645	Open in IMG/M
3300024225\|Ga0224572_1002298	All Organisms → cellular organisms → Bacteria → Proteobacteria	3058	Open in IMG/M
3300025320\|Ga0209171_10196832	Not Available	1140	Open in IMG/M
3300025915\|Ga0207693_10240117	Not Available	1422	Open in IMG/M
3300026467\|Ga0257154_1050901	All Organisms → cellular organisms → Bacteria → Proteobacteria	642	Open in IMG/M
3300027064\|Ga0208724_1019952	All Organisms → cellular organisms → Bacteria → Proteobacteria	670	Open in IMG/M
3300027090\|Ga0208604_1000657	Not Available	3868	Open in IMG/M
3300027090\|Ga0208604_1016498	Not Available	701	Open in IMG/M
3300027109\|Ga0208603_1023704	All Organisms → cellular organisms → Bacteria → Proteobacteria	978	Open in IMG/M
3300027370\|Ga0209010_1005082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2705	Open in IMG/M
3300027439\|Ga0209332_1001450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5176	Open in IMG/M
3300027521\|Ga0209524_1087519	All Organisms → cellular organisms → Bacteria → Proteobacteria	655	Open in IMG/M
3300027567\|Ga0209115_1012103	All Organisms → cellular organisms → Bacteria → Proteobacteria	1849	Open in IMG/M
3300027568\|Ga0208042_1023962	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	1571	Open in IMG/M
3300027684\|Ga0209626_1005878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2745	Open in IMG/M
3300027684\|Ga0209626_1076687	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300027696\|Ga0208696_1066844	All Organisms → cellular organisms → Bacteria → Proteobacteria	1229	Open in IMG/M
3300027853\|Ga0209274_10077989	All Organisms → cellular organisms → Bacteria → Proteobacteria	1609	Open in IMG/M
3300027854\|Ga0209517_10363747	Not Available	824	Open in IMG/M
3300027855\|Ga0209693_10497791	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	583	Open in IMG/M
3300027869\|Ga0209579_10006235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7935	Open in IMG/M
3300027869\|Ga0209579_10182172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1123	Open in IMG/M
3300027879\|Ga0209169_10019129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3712	Open in IMG/M
3300027879\|Ga0209169_10143032	All Organisms → cellular organisms → Bacteria → Proteobacteria	1244	Open in IMG/M
3300027884\|Ga0209275_10043209	All Organisms → cellular organisms → Bacteria → Proteobacteria	2134	Open in IMG/M
3300027884\|Ga0209275_10671014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	597	Open in IMG/M
3300027889\|Ga0209380_10183792	Not Available	1226	Open in IMG/M
3300027889\|Ga0209380_10243759	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1055	Open in IMG/M
3300027889\|Ga0209380_10263569	All Organisms → cellular organisms → Bacteria → Proteobacteria	1012	Open in IMG/M
3300027895\|Ga0209624_10080279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2112	Open in IMG/M
3300028047\|Ga0209526_10172805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1506	Open in IMG/M
3300028906\|Ga0308309_10249764	Not Available	1484	Open in IMG/M
3300028906\|Ga0308309_10907648	Not Available	764	Open in IMG/M
3300028906\|Ga0308309_10924681	Not Available	757	Open in IMG/M
3300028906\|Ga0308309_11010921	Not Available	720	Open in IMG/M
3300029636\|Ga0222749_10138147	All Organisms → cellular organisms → Bacteria → Proteobacteria	1177	Open in IMG/M
3300030659\|Ga0316363_10352737	Not Available	579	Open in IMG/M
3300030763\|Ga0265763_1000242	All Organisms → cellular organisms → Bacteria → Proteobacteria	3035	Open in IMG/M
3300031090\|Ga0265760_10066969	All Organisms → cellular organisms → Bacteria → Proteobacteria	1098	Open in IMG/M
3300031122\|Ga0170822_17077482	All Organisms → cellular organisms → Bacteria → Proteobacteria	521	Open in IMG/M
3300031231\|Ga0170824_124178975	Not Available	775	Open in IMG/M
3300031231\|Ga0170824_126820225	Not Available	585	Open in IMG/M
3300031446\|Ga0170820_10497115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas → Brevundimonas diminuta	633	Open in IMG/M
3300031469\|Ga0170819_15882340	Not Available	515	Open in IMG/M
3300031708\|Ga0310686_102542656	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300031708\|Ga0310686_110102515	Not Available	3292	Open in IMG/M
3300031708\|Ga0310686_111816274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae → Roseibium → unclassified Roseibium → Roseibium sp. TrichSKD4	3887	Open in IMG/M
3300031708\|Ga0310686_115522365	All Organisms → cellular organisms → Bacteria → Proteobacteria	1898	Open in IMG/M
3300031715\|Ga0307476_10000594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	26704	Open in IMG/M
3300031753\|Ga0307477_10377361	All Organisms → cellular organisms → Bacteria → Proteobacteria	973	Open in IMG/M
3300032160\|Ga0311301_10107218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5400	Open in IMG/M
3300032160\|Ga0311301_10368710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2228	Open in IMG/M
3300032180\|Ga0307471_101571004	All Organisms → cellular organisms → Bacteria → Proteobacteria	815	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.35%
Host-Associated	Host-Associated	0.65%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.16%
Aquatic	Environmental → Aquatic	14.19%
Plants	Host-Associated → Plants	0.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.52%
Freshwater	Environmental → Aquatic → Freshwater	9.03%
Thermal Springs	Environmental → Aquatic → Thermal Springs	3.23%
Sediment	Environmental → Aquatic → Sediment	1.94%
Peat	Environmental → Terrestrial → Peat	0.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	49.03%
Loam	Environmental → Terrestrial → Soil → Loam	29.68%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	9.03%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.81%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	3.23%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.94%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	30.32%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	27.74%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.71%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	9.03%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	5.81%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	3.23%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.94%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.16%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	18.71%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	11.61%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	9.03%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	5.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.52%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.23%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	3.23%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.23%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	3.23%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.94%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.94%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.94%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.29%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.65%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.65%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.65%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001182	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022881	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 20-24	Environmental	Open in IMG/M
3300024225	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5	Host-Associated	Open in IMG/M
3300025320	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026467	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-A	Environmental	Open in IMG/M
3300027064	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF003 (SPAdes)	Environmental	Open in IMG/M
3300027090	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF016 (SPAdes)	Environmental	Open in IMG/M
3300027109	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF008 (SPAdes)	Environmental	Open in IMG/M
3300027370	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3 (SPAdes)	Environmental	Open in IMG/M
3300027439	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027521	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027567	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027696	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300030763	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_100065768	3300000567	Peatlands Soil	MSDPTDRLDQTDEDIFVPKYSDEDLEAAVGSSPQCFPTFTCSQPMCATGGGCGTWPGN*
JGI12270J11330_100105052	3300000567	Peatlands Soil	MSDRMDHLSQTDEDIFVPKYSDEDLEAAVGNPQAFPTFTCSQPMCATGGGCGTWPGN*
JGI12668J13544_10048361	3300001182	Forest Soil	GQTDDDIFVPKYSDEDLEAVAGPPQCFPTFTCSQPMCATGGGCGTWPGN*
JGI12635J15846_100847351	3300001593	Forest Soil	MTAMSDTMDRLGQTDEDIFVPKYSDEDLEAAVGSPQAFPTFTCSQPMCATGGGCGTWPGN
Ga0062384_1004060252	3300004082	Bog Forest Soil	MTAMSDTMDHLGQTDEDIFVPKYSDEDLEAAVGNPQAFPTFTCSQPMCATGGGCGTWPGN
Ga0070714_1006468742	3300005435	Agricultural Soil	MKAMSDPMDHLGQTDEDIFVPEYSDEDLEATAGPPQCFPTFTCSQPMCATGGGCGTWPG*
Ga0070731_100392533	3300005538	Surface Soil	MNDMMDRLGQTDEDIFVPKYSDEDLEAAVGSNPQAFPTFTCSQPMCATGGGCGTWPG*
Ga0070761_102077472	3300005591	Soil	MSDTMDHLGQTDEDIFIPKYSDEDLEAAVGTSPQCFPTFTCSQPMCATGGGCGTWPGN*
Ga0070762_102517952	3300005602	Soil	MSDPMDRLGQTDEDIFVPKYSDEDLEAAVGGSPQAFPTFTCSQPMCATGGGCGTWPGN*
Ga0070763_101411993	3300005610	Soil	DDDIFVPKYSDEDLEAAVGSPQSFPTFTCSQPMCATGGGCGTWPGN*
Ga0070764_102631882	3300005712	Soil	MNNTMDHLDQTDEDILVPEYSDDDLEAAVGNPQAFPTFTCSQPMCATGGGCGTWPGT*
Ga0070764_103195542	3300005712	Soil	MNDTMDHLGQTDEDIFVPKYSDGDLEAAVGSPQSFPTFTCSVPMCATGGGCGTWPGN*
Ga0070766_101660493	3300005921	Soil	MKAMSDTMDHLGQAGEDMFVPQYSDEDLEAAVGSPHCFPTFTCSQPMCATGGGCGTWTGN
Ga0070766_101772682	3300005921	Soil	MSDTMDRLSQTDDDIFVPKYSDEDLEAAVGTNPQAFPTFTCSQPMCATGGGCGTWPG*
Ga0070766_103669461	3300005921	Soil	MSDTMDHLGQTDEDIFVPKYSDEDLEAAVGNPQAFPTFTCSQPMCATGGGCGTWPGN*
Ga0070766_104663062	3300005921	Soil	MTAMSDTMDRLGQTDEDIFVPNYSDEELEAVAGPPQCFPTFTCSQPMCATGGGCGTWPG*
Ga0070766_108360712	3300005921	Soil	MSDTMDRLGQTDEDIFVPKYSDEDLEAAVGNPQAFPTFTCSQPMCATGGGCGTWPGT*
Ga0066789_104147673	3300005994	Soil	MSDTMDRLGQTDEDIFVPKYSDEDLEAAVGNPQAFPTFTCSQPMCATGGGCGTWPGN*
Ga0075028_1010352162	3300006050	Watersheds	MSNTMDRLDQTDAIIFVPKYSDEDLEAAVGNPQAFPTFTCSQPMCATGG
Ga0075019_104525972	3300006086	Watersheds	MKTDKLSQTDEDAFALKFSDDDLEAAAGNPTLFPTFTCSQPMCATGGGCGTWPGFDS*
Ga0075014_1003806032	3300006174	Watersheds	MSDTMDHLGQTDEDVFVPKYSDEDLEAAVGGSPQAFPTFTCSQPMCATGGGCGTWPGN*
Ga0070712_1005440522	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MSDTMDHLGQTDDDIFLPEYSDDDLEATAGQPQAFPTFTCSQPMCATGGGCGTWPG*
Ga0070765_1002000422	3300006176	Soil	MSDTMDRLGQSDEDIFVPKHSDEDLEAAVGNPQSFPTFTCSVPMCATGGGCGTWPGN*
Ga0070765_1005483723	3300006176	Soil	MQAMSNAMDHLGQTDEDIFVPKYSDEDLEAAVGGSPQAFPTFTCSQPMCATGGGCGTWPGN*
Ga0070765_1005783662	3300006176	Soil	MNNTMDRRGQSDEDIFVPKYSDEDLEAAVGNPQAFPTFTCSQPMCATGGGCGTWPGT*
Ga0070765_1008350072	3300006176	Soil	MSNTMDHLGQTDEDIFVSKYSDEDLEAAVGGSPQAFPTFTCSQPMCATGGGCGTWPGN*
Ga0070765_1019876192	3300006176	Soil	MSDTMNRLGQTDEDIFVPKYSDADLEAAVGTSPQAFPTFTCSQPMCATGGGCGTW
Ga0070765_1020368231	3300006176	Soil	MKTMKETTESRSQTDESAFGLKFSDEDLEASTGNPTLFPTFTCSQPMCATGGGCGTWPGFDS*
Ga0073928_102716012	3300006893	Iron-Sulfur Acid Spring	MSEIMDHLGTEEDIFAPKYSDEDLEAAVGNPQAFPTFTCSQPMCATGGGCGTWPGN*
Ga0116214_11528831	3300009520	Peatlands Soil	MRAMSDTMDRLGQSDEDIFAPKYSDEDLEAAVGNPQCFPTFTCSQPMCATGGGCGTWRGN
Ga0116222_10078133	3300009521	Peatlands Soil	MQAMSDPTDRLDQTDEDIFVPKYSDEDLEAAVGSSPQCFPTFTCSQPMCATGGGCGTWPGN*
Ga0116220_103429212	3300009525	Peatlands Soil	MHAMSDTMNYIGQTDEDVFVPKYSDEDLEAAVGNPQAFPTFTCSQPMCATGGGCGTWPGN
Ga0116220_104706762	3300009525	Peatlands Soil	MKAMSDTMDHLGQTDEDFFVPKYSDEDLEAAVGNPQCFPTFTCSQPMCATGGGCGTWPGT
Ga0116219_100494802	3300009824	Peatlands Soil	MDHLSQTDEDIFVPKYSDEDLEAAVGNPQAFPTFTCSQPMCATGGGCGTWPGN*
Ga0116223_104526462	3300009839	Peatlands Soil	MSDTTYHLDQTDEDMFVPKYSDEDLEAAVGSSPQCFPTFTCSQPMCATGGGCGTWPGN*
Ga0116223_106736212	3300009839	Peatlands Soil	MTAMSDTMDHLGQTDEDIFVPKYSDEDLEAAVGNSPQAFPTFTCSQPMCATGGGCGTWPGN*
Ga0116223_107266131	3300009839	Peatlands Soil	MKAMSDPTDRLDQTHDDIFVPKYSDEDLEAAVGSPQCFPTFTCSQPMCATGGGGGTWPGT
Ga0136449_1001257722	3300010379	Peatlands Soil	MKETTENLSRTDEDIFVSKYSDEELETAAGNPTLFPTFTCSQPMCATGGGCGTWPGFN*
Ga0136449_1003070924	3300010379	Peatlands Soil	MSDTMDRLGQSDEDIFAPKYSDEDLEAAVGNPQCFPTFTCSQPMYATGGGCGTWRGN*
Ga0126383_111155441	3300010398	Tropical Forest Soil	PSQADDDVFTVEFTDEDLEAATGGPQCFPSFTCGPPMCATGGGCGTFPGGCL*
Ga0181530_100586461	3300014159	Bog	HMRVGAMSDTIGHLGHTDEDIFALKFSDDDLEAAAGNPTLFPTFTCSQPMCATGGGCGTWTAGFDS*
Ga0181530_105522591	3300014159	Bog	MTAMSDTMNRLDQTDEDIFVPKYSDEDMEAAVGNPQAFPTFTCSQPMCATGGGCG
Ga0181538_101028782	3300014162	Bog	MGDTMDHLGQTDEDIFIPKYSDEDLEAAVGSSPQAFPTFTCSQPMCATGGGCGTWPGN*
Ga0181532_100439905	3300014164	Bog	MSDTIGHLGHTDEDIFALKFSDDDLEAAADNPTLFPTFTCSQPMCATGGGGGTWTAGFDS
Ga0181532_106073882	3300014164	Bog	MKAMNDTMDHLGQTDDDIFVPKYSDEDLEATVGSSPQAFPTFTCSQPMCATGGGCGTWPGN*
Ga0182018_100898663	3300014489	Palsa	MKTDNPSQTDEDVFALKFSDDDLEAAAGSPTLFPTFTCSLPMCATGGGCGTWPGN*
Ga0182018_101345373	3300014489	Palsa	MKAMSDTMDHLSQTDDDIFVPKYSDEDLEAAVGTNPQAFPTFTCSQPMCATGGGCGTWPG
Ga0182018_105845771	3300014489	Palsa	MTAMSNTMDRLGQSDEDIFVPKYSDEDLEAAVGNPQAFPTFTCSQPMCATGGGCGTWPGN
Ga0182024_1000679011	3300014501	Permafrost	MKTDHLSQTDEDIFALKFSDDDLEAAAGTPTLFPTFTCSVPMCSTGGGCGTWPGN*
Ga0182024_100068436	3300014501	Permafrost	MSDTIGNLSHTDEDVFALRFSDNDLEAAAGNPTLFPTFTCSQPMCATGGGCGTWTAGFDG
Ga0182024_1001527422	3300014501	Permafrost	MTMKTDNLSQIDEDVFALKYSDDDLEAAAGSPTLMPTFTCSVPMCATGGGCGTWPGN*
Ga0182024_100404311	3300014501	Permafrost	MIAMSDTMDRLGQSDEDIFVPKYSDEDLEAAVGSPQSFPTFTCSVPMCATGGGCGTWPGN
Ga0182024_104831592	3300014501	Permafrost	MGDTMNHLDQTDADIFAPKYSDEDLEAAVGNPQAFPPFTCSQPMCATGGGCGTWPGN*
Ga0181536_102550032	3300014638	Bog	MDEAMSDRMDHLSQTDEDIFVPKYSDEDLEAAVGNPQAFPTFTCSQPMCATGGGCGTWPGN*
Ga0181522_100897832	3300014657	Bog	MKAMSETMDRLGQSDEDIFVPKYSDEDLEAAVGNPQAFPTFTCSQPMCATGGGCGTWPGN
Ga0181522_109434511	3300014657	Bog	MTAMSDTMDRLGQTDDDIFVPKYSDDDLEAAVGGSPQAFPTFTCSQPMCATGGGCGTWTGN*
Ga0181505_111260701	3300016750	Peatland	GNYKPTGDNFADYMRVGAMSDTIGHLGHTDEDIFALKFSDDDLEAAADNPTLFPTFTCSQPMCATGGGCGTWTAGFDS
Ga0187854_104293002	3300017938	Peatland	MKAMSDRMDHLSQTDEDIFVPKYSDEDLEAAVGNPQAFPTFTCSQPMCATGGGCGTWPGN
Ga0187879_104152321	3300017946	Peatland	MSDTIGHLGHTDEDIFALKFSDDDLEAAADNPTLFPTFTCSQPMCATGGGCGTWTAGFDS
Ga0187861_102860362	3300018020	Peatland	MSDTMNRLDQTDEDIFVPKYSDEDLEAAVGNPQAFPTFTCSQPMCATGGGCGTWPGN
Ga0187857_100844362	3300018026	Peatland	MSDRMDHLSQTDEDIFVPKYSDEDLEAAVGNPQAFPTFTCSQPMCATGGGCGTWPGN
Ga0193726_1000026253	3300020021	Soil	MNDTMDHLGQTDEDVFVPKYSDEDLEAAVGGNPQAFPTFTCSQPMCATGGGCGTWPGN
Ga0210403_103429163	3300020580	Soil	MKAMSDTMDRLGQTDEDVFVPKYSDEDLEAAVGNPQAFPTFTCSQPMCATGGGCGTWPGT
Ga0210399_103855554	3300020581	Soil	GMTAMSDTMDRFGQTDEDILVPKYSDEDLEAAVGNPQAFPTFTCSQPMCATGGGCGTWPG
Ga0210395_100089706	3300020582	Soil	MKAMNDTMDHLAHPDDDIFVPRYSDDELEAAVGSNPKCFPTFTCSQPMCATGGGCGTWTG
Ga0210401_102984841	3300020583	Soil	MMTAMSDTMDRLGQSDDDIFVPKYSDEDLEAAVGTSPQCFPTFTCSQPMCATGGGCGTWPGNWSQQPSANSRDAGQFRAN
Ga0210404_102434132	3300021088	Soil	MSDTTDRLGQTDEDIFVPKYSDEDLEAAVGNPQAFPTFTCSQPMCATGGGCGTWPGN
Ga0210400_102102292	3300021170	Soil	MSAMSDTMDRLGQSDEDIFVPKHSDEDLEAAVGNPQSFPTFTCSVPMCATGGGCGTWPGN
Ga0210400_110497471	3300021170	Soil	MTAMSDTMDRLGQSDDDIFVPKYSDEDLEAAVGTSPQCFPTFTCSQPMCATGGGCGTWPGNWSQQPSANSRD
Ga0210405_100352502	3300021171	Soil	MSDTMDRLGQSDDDIFVPKYSDEDLEAAVGTSPQCFPTFTCSQPMCATGGGCGTWPGN
Ga0210405_100790522	3300021171	Soil	MSDTWDSLDQTDDDVFVPKYSDEDLEAAVGNPQAFPTFTCSQPMCATGGGCGTWPGN
Ga0210408_10000006249	3300021178	Soil	MSDPMDHFAHPDEDIFVPKYSDENLEAAVGTSPQCFPTFTCSQPMCATGGGCGTWPG
Ga0210408_103888451	3300021178	Soil	MIEISRAVRMRMKAMSDTMDRLGQTDDDIFVPKYSDEDLEASTGSPQAFPTFTCSQPMCATGGGCGTWPGN
Ga0210396_101458434	3300021180	Soil	MSDTMNRLGQSDDDIFAPKYSDEDLEAAVGNPQAFPTFTCSQPMCATGGGCGTWPGN
Ga0210396_102120603	3300021180	Soil	MKTDNLSQTDEDVFSLKFSDDDLEASAGNPTLFPTFTCSVPMCATGGGCGTWPGN
Ga0210388_104839722	3300021181	Soil	MSAMSDTMDRLGQSDEDIFVPKYSDEDLEAAVGNPQSFPTFTCSQPMCATGGGCGTWPGN
Ga0210385_107707201	3300021402	Soil	MNNTMDRRGQSDEDIFVPKYSDEDLEAAVGNPQAFPTFTCSQPMCATGGGCGTWPGT
Ga0210385_110701082	3300021402	Soil	MTAMNDTMNHIGQTDDDIFVPKYSDEDLEAAVGAPQAFPTFTCSQPMCATGGGCGTWPGN
Ga0210397_111419292	3300021403	Soil	VPITKEMTAMNDTMNHIGQTDDDIFVPKYSDEDLEAAVGAPQAFPTFTCSQPMCATGGGCGTWPGN
Ga0210389_104825821	3300021404	Soil	MSDTMDHLDQTDEDMFVPKYSDEDLEAAVGSSPQSFPTFTCSVPMCATGGGCGTWPGN
Ga0210387_100788116	3300021405	Soil	MKTDNLSQTDEDVFSLKFSDDDLEASAGNPTLFPTFTCSVPMCATGSGCGTWPGN
Ga0210387_107787281	3300021405	Soil	MSAMSDTMDRLGQSDEDIFVPKHSDEDLEAAVGSPQSFPTFTCSVPMCATGGGCGTWPGN
Ga0210387_113525251	3300021405	Soil	MMTAMSDTMDRLGQSDDDIFVPKYSDEDLEAAVGTSPQCFPTFTCSQPMCATGGGCGTWPGN
Ga0210386_105293501	3300021406	Soil	MTAMNNTMDRRGQSDEDIFVPKYSDEDLEAAVGNPQAFPTFTCSQPMCATGGGCGTWPGT
Ga0210386_111308281	3300021406	Soil	RLGQSDEDIFVPKHSDEDLEAAVGNPQSFPTFTCSVPMCATGGGCGTWPGN
Ga0210386_113341661	3300021406	Soil	MSDTMVRLGQTDDDIFIPNYSDEDLEAAVGGSPQAFPTFTCSQPMCATGGGCGTWPGN
Ga0210383_101732973	3300021407	Soil	MSDTMDRLGQSDEDIFVPKHSDEDLEAAVGNPQSFPTFTCSVPMCATGGGCGTWPGN
Ga0210394_102337783	3300021420	Soil	MSDTMGHRGQSDDDIFVPKYSDEDLEAAVGGSPQAFPTFTCSQPMCATGGGCGTWPGN
Ga0210390_102965273	3300021474	Soil	MSDTMDRLSQTDEGVFVPKYSDEDLEAAVGNPQAFPTFTCSQPMCATGGGCGTWPGT
Ga0210390_113174542	3300021474	Soil	MNDTMNHIGQSDDDIFVPKYSDEDLEAAVGAPQAFPTFTCSQPMCATGGGCGTWPGN
Ga0210392_104709562	3300021475	Soil	MKAMSDTMDRLGQSEDDIFVPKYSDEDLEAAVGNPQAFPTFTCSQPMCATGGGCGTWPGN
Ga0210398_100478863	3300021477	Soil	MNDTMDHLGQTDDDIFIPEYSDDELEAVVGSSPQAFPTFTCSQPMCATGGGCGTWTGN
Ga0210398_102007683	3300021477	Soil	MKAMNDAMDHFGKTDDDIFVPKYSDEDLEAAVGSSPQSFPTFTCSQPMCATGGGCGTWTG
Ga0210398_102188703	3300021477	Soil	MSDTMNHLGQTEEDIFVPKYSDEDLEAAVGRPQCFPTFTCSQPMCATGGGCGTWPGN
Ga0210398_107830112	3300021477	Soil	MKAMSDTMDRLGQSDEDIFVPKHSDEDLEAAVGNPQSFPTFTCSVPMCATGGGCGTWPGN
Ga0210402_111244901	3300021478	Soil	RLGQTDEDIFVPKYSDEDLEAAVGNPQAFPTFTCSQPMCATGGGCGTWPGN
Ga0210402_113179931	3300021478	Soil	MSDTMDRLGQIDEDIFVPKYSDEDLEAAVGNTQAFPTFTCSQPMCATGGGCGTWPGN
Ga0210410_100183635	3300021479	Soil	MSETMDRLGPTDEDIFVPKYSDEDLEAAVGNSPQCFPTFTCSQPMCATGGGCGTWPGN
Ga0210410_105724981	3300021479	Soil	MNETMDHLGQTDDEVFVPKYSDEDLEAAVGSSPQAFPTFTCSQPMCATGGGCGTWPGN
Ga0212123_100614504	3300022557	Iron-Sulfur Acid Spring	MSDTMDRLGQTDEDIFVPKYSDEDLEAAVGNPQAFPTFTCSQPMCATGGGCGTWPGN
Ga0212123_101987711	3300022557	Iron-Sulfur Acid Spring	MTAMSEIMDHLGTEEDIFAPKYSDEDLEAAVGNPQAFPTFTCSQPMCATGGGCGTWPGN
Ga0212123_107895762	3300022557	Iron-Sulfur Acid Spring	MSHTMDHLDQTDDDIFVPKYSDEDLEAAVGGSPQAFPTFTCSQPMCATGGGCGTWPG
Ga0224545_10422922	3300022881	Soil	MSHTMDRLGQTDEDIFVPKYSDEDLEAAVGNPQAFPTFTCSQPMCATGGGCGTWPGN
Ga0224572_10022983	3300024225	Rhizosphere	MSDTMDRLGQTDEDIFVPNYSDEELEAVAGPPQCFPTFTCSQPMCATGGGCGTWPG
Ga0209171_101968321	3300025320	Iron-Sulfur Acid Spring	MSEIMDHLGTEEDIFAPKYSDEDLEAAVGNPQAFPTFTCSQPMCATGGGCGTWPGN
Ga0207693_102401172	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MSDTMDHLGQTDDDIFLPEYSDDDLEATAGQPQAFPTFTCSQPMCATGGGCGTWPG
Ga0257154_10509012	3300026467	Soil	MSDTMDRLGQTDEDIFVPKYSDEDLEAAVGNPQSFPTFTCSVPMCATGGGCGTWPGN
Ga0208724_10199521	3300027064	Forest Soil	MNNTMDRRGQSDEDIFVPKYSDEDLEAAVGTNPQAFPTFTCSQPMCATGGGCGTWTGN
Ga0208604_10006571	3300027090	Forest Soil	MSDTMDRLGQTDDDIFVPKYSDEDLEAAVGGSPQAFPTFTCSQPMCATGGGCGTWPGN
Ga0208604_10164982	3300027090	Forest Soil	MSDTMDHLDQTDEDIFIPKYSDEDLEVAVGGSPQCFPTFTCSQPMCATGGGCGTWPGN
Ga0208603_10237042	3300027109	Forest Soil	TDEDIFVPKYSDEDLEAAVGGSPQAFPTFTCSQPMCATGGGCGTWPGT
Ga0209010_10050824	3300027370	Forest Soil	MSDTINHLDQTDADMFVPKYSDEDLEAAVGGSPQAFPTFTCSQPMCATGGGCGTWPG
Ga0209332_10014504	3300027439	Forest Soil	MSDTMDRLGQTDEDIFVPKYSDEDLEAAVGSPQAFPTFTCSQPMCATGGGCGTWPGN
Ga0209524_10875192	3300027521	Forest Soil	MSDTMDRLGQTDEDVFVPKYSDEDLEAAVGNPQAFPTFTCSQPMCATGGGCGTWPGN
Ga0209115_10121032	3300027567	Forest Soil	MSDTMDRLGQSDEDVFVPKYSDEDLEAAVGSPQAFPTFTCSVPMCATGGGCGTWPGN
Ga0208042_10239621	3300027568	Peatlands Soil	MSDPTDRLDQTDEDIFVPKYSDEDLEAAVGSSPQCFPTFTCSQPMCATGGGCGTWPGN
Ga0209626_10058784	3300027684	Forest Soil	MSDTMDRLGQTDDDIFVPKYSDEDLEAVAGPPQCFPTFTCSQPMCATGGGCGTWPGN
Ga0209626_10766871	3300027684	Forest Soil	MSDTMERLGQTDDDIFVPKYSDEDLEAAVGNPQAFPTFTCSQPMCATGGGCGTWPGN
Ga0208696_10668443	3300027696	Peatlands Soil	DPTDRLDQTDEDIFVPKYSDEDLEAAVGSSPQCFPTFTCSQPMCATGGGCGTWPGN
Ga0209274_100779893	3300027853	Soil	MSDTMDHLGQTDEDIFIPKYSDEDLEAAVGTSPQCFPTFTCSQPMCATGGGCGTWPGN
Ga0209517_103637471	3300027854	Peatlands Soil	MSDTMDHLGQTDEDIFVPKYSDEDLEAAVGNSPQAFPTFTCSQPMCATGGGCGTWPGN
Ga0209693_104977912	3300027855	Soil	MNDTMDHLGQTDEDIFVPKYSDEDLEAAVGTSPQAFPTFTCSQPMCATGGGCGTWPGN
Ga0209579_100062356	3300027869	Surface Soil	MNDMMDRLGQTDEDIFVPKYSDEDLEAAVGSNPQAFPTFTCSQPMCATGGGCGTWPG
Ga0209579_101821722	3300027869	Surface Soil	MSNTMDHLGPTDDDIFVPKYSDEDLEAAVGNPQAFPTFTCSQPMCATGGGCGTWPGN
Ga0209169_100191295	3300027879	Soil	MNDTMDHLGQTDEDIFVPKYSDGDLEAAVGSPQSFPTFTCSVPMCATGGGCGTWPGN
Ga0209169_101430322	3300027879	Soil	MKAMNDTMDHRGQTDDDVFVPKYSDEDLEAAVGSSPQAFPTFTCSQPMCATGGGCGTWTG
Ga0209275_100432092	3300027884	Soil	MSDPMDRLGQTDEDIFVPKYSDEDLEAAVGGSPQAFPTFTCSQPMCATGGGCGTWPGN
Ga0209275_106710141	3300027884	Soil	NTMDRLGQSDEDVFVPKYSDEDLEAAVGTSPQCFPTFTCSQPMCATGGGCGTWPGN
Ga0209380_101837921	3300027889	Soil	MSDTMDHLGQTDEDIFVPKYSDEDLEAAVGNPQAFPTFTCSQPMCATGGGCGTWPGN
Ga0209380_102437592	3300027889	Soil	MSDTMDRLSQTDDDIFVPKYSDEDLEAAVGTNPQAFPTFTCSQPMCATGGGCGTWPG
Ga0209380_102635692	3300027889	Soil	MSKPMDRLGQTDEDIFVPKYSDEDLEAAVGGSPQAFPTFTCSQPMCATGGGCGTWPGN
Ga0209624_100802791	3300027895	Forest Soil	MSDTMDHLGQTDDDIFVPKYSDEDLEAAVGNPQAFPTFTCSQPMCATGGGCGTWPGN
Ga0209526_101728051	3300028047	Forest Soil	GMIAMNDTMDRLGQSDEDIFVPKYSDEDLEAAVGNPQAFPTFTCSQPMCATGGGCGTWPG
Ga0308309_102497643	3300028906	Soil	MKTMKETTESRSQTDESAFGLKFSDEDLEASTGNPTLFPTFTCSQPMCATGGGCGTWPGFDS
Ga0308309_109076482	3300028906	Soil	MQAMSNAMDHLGQTDEDIFVPKYSDEDLEAAVGGSPQAFPTFTCSQPMCATGGGCGTWPG
Ga0308309_109246812	3300028906	Soil	AMSNTMDHLGQTDEDIFVSKYSDEDLEAAVGGSPQAFPTFTCSQPMCATGGGCGTWPGN
Ga0308309_110109211	3300028906	Soil	MSDTMNRLGQTDEDIFVPKYSDADLEAAVGTSPQAFPTFTCSQPMCATGGGCGTWLGN
Ga0222749_101381473	3300029636	Soil	MKAMSDTMDRLGQTDEDVFVPKYSDEDLEAAVGNRQAFPTFTCSQPMCATGGGCGTWPGN
Ga0316363_103527371	3300030659	Peatlands Soil	MSDTTYHLDQTDEDMFVPKYSDEDLEAAVGSSPQCFPTFTCSQPMCATGGGCGTWPGN
Ga0265763_10002425	3300030763	Soil	MSDTMDRLGQSDDDIFVPKYSDEDLEAAVGNPQAFPTFTCSQPMCATGGGCGTWPGN
Ga0265760_100669693	3300031090	Soil	MSDPTDRRGQTDDDIFIPKYSDDDLEAAVGGSPQAFPTFTCSQPMCATGGGCGTWPGN
Ga0170822_170774822	3300031122	Forest Soil	TMDHLNQTDEDILAPKYSDEDLEAAVGNPQSFPTFTCSQPMCATGGGCGTWPGN
Ga0170824_1241789752	3300031231	Forest Soil	SKPIVPNTRGMKAMSDTMDRLGQTDDDIFVPKYSDEDLEAAVGNPQAFPTFTCSQPMCATGGGCGTWPGN
Ga0170824_1268202251	3300031231	Forest Soil	MSDTMDSLGQTDEDIFVPKYSDDDLEAAVGGSPQAFPTFTCSQPMCATGGGCGTWPGN
Ga0170820_104971151	3300031446	Forest Soil	MSDTMDQLGQTDEDIFVPKYSDEDLEAAVGNPQAFPTFTCSQPMCATGGGCGTWPGN
Ga0170819_158823402	3300031469	Forest Soil	MNDTMDRLGQTDEDVFVPKYSDEDLEAAVGNPQAFPTFTCSQPMCATGGGCGTWPGN
Ga0310686_1025426562	3300031708	Soil	MTETMDRLGQTDEDIFVPKYSDEDLEAAVGSNPQCFPTFTCSQPMCATGGGCGTWTGN
Ga0310686_1101025152	3300031708	Soil	MKAMSDTMDRLGQTDEDIFVPKYTDEDLEAAVGNPQAFPTFTCSQPMCATGGGCGTWPGT
Ga0310686_1118162741	3300031708	Soil	MSDKMDHLDQTDEDMFVPKYSDEDLEAAVGSPQAFPTFTCSQPMCATGGGCGTWPGN
Ga0310686_1155223652	3300031708	Soil	MSDKMDHLVPTDEDIFIPKYSDEDLEAAVGNPQAFPTFTCSQLMCATGGGCGTWPGN
Ga0307476_100005946	3300031715	Hardwood Forest Soil	MSDTMDRLSQTDDDIFVPKYSDEDLEAAVGAPQCFPTFTCSQPMCATGGGCGTWPGN
Ga0307477_103773612	3300031753	Hardwood Forest Soil	MTAMSDTMDRLGQSDEDIFVPKYSDEDLEAAVGTSPQCFPTFTCSQPMCATGGGCGTWTG
Ga0311301_101072182	3300032160	Peatlands Soil	MSDTMNYIGQTDEDVFVPKYSDEDLEAAVGNPQAFPTFTCSQPMCATGGGCGTWPGN
Ga0311301_103687104	3300032160	Peatlands Soil	MSDTMDRLGQSDEDIFAPKYSDEDLEAAVGNPQCFPTFTCSQPMCATGGGCGTWPGT
Ga0307471_1015710042	3300032180	Hardwood Forest Soil	MNDTMDHLGQTDEDVFVPKYSDEDLEAAVGGNPQAFPTFTCSQPMCATGGGCGTWPG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F044086

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences