NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F044043

Metagenome / Metatranscriptome Family F044043

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F044043
Family Type Metagenome / Metatranscriptome
Number of Sequences 155
Average Sequence Length 39 residues
Representative Sequence GAWWFGVQLPKIRVEARRLIVAQAMAGGEPAEEMTAPVAED
Number of Associated Samples 130
Number of Associated Scaffolds 155

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 1.94 %
% of genes near scaffold ends (potentially truncated) 97.42 %
% of genes from short scaffolds (< 2000 bps) 90.97 %
Associated GOLD sequencing projects 119
AlphaFold2 3D model prediction Yes
3D model pTM-score0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (64.516 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(14.194 % of family members)
Environment Ontology (ENVO) Unclassified
(21.290 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(67.742 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 42.03%    β-sheet: 0.00%    Coil/Unstructured: 57.97%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.48
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 155 Family Scaffolds
PF00881Nitroreductase 19.35
PF03807F420_oxidored 7.10
PF13620CarboxypepD_reg 5.81
PF07676PD40 3.87
PF02163Peptidase_M50 2.58
PF05977MFS_3 1.94
PF13649Methyltransf_25 1.94
PF12704MacB_PCD 1.29
PF11453DUF2950 1.29
PF01558POR 1.29
PF07843DUF1634 0.65
PF04963Sigma54_CBD 0.65
PF06029AlkA_N 0.65
PF12483GIDE 0.65
PF01638HxlR 0.65
PF13673Acetyltransf_10 0.65
PF14534DUF4440 0.65
PF00082Peptidase_S8 0.65
PF12762DDE_Tnp_IS1595 0.65
PF01613Flavin_Reduct 0.65
PF04519Bactofilin 0.65
PF02518HATPase_c 0.65
PF01070FMN_dh 0.65
PF00857Isochorismatase 0.65
PF01797Y1_Tnp 0.65
PF01471PG_binding_1 0.65
PF01740STAS 0.65
PF02368Big_2 0.65
PF00392GntR 0.65
PF13466STAS_2 0.65
PF01609DDE_Tnp_1 0.65
PF02633Creatininase 0.65
PF10677DUF2490 0.65
PF00892EamA 0.65
PF02775TPP_enzyme_C 0.65
PF01523PmbA_TldD 0.65
PF14417MEDS 0.65
PF01475FUR 0.65
PF04055Radical_SAM 0.65
PF00583Acetyltransf_1 0.65
PF01520Amidase_3 0.65

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 155 Family Scaffolds
COG2814Predicted arabinose efflux permease AraJ, MFS familyCarbohydrate transport and metabolism [G] 1.94
COG1014Pyruvate:ferredoxin oxidoreductase or related 2-oxoacid:ferredoxin oxidoreductase, gamma subunitEnergy production and conversion [C] 1.29
COG1664Cytoskeletal protein CcmA, bactofilin familyCytoskeleton [Z] 0.65
COG5659SRSO17 transposaseMobilome: prophages, transposons [X] 0.65
COG5433Predicted transposase YbfD/YdcC associated with H repeatsMobilome: prophages, transposons [X] 0.65
COG5421TransposaseMobilome: prophages, transposons [X] 0.65
COG4272Uncharacterized membrane proteinFunction unknown [S] 0.65
COG3385IS4 transposase InsGMobilome: prophages, transposons [X] 0.65
COG3293TransposaseMobilome: prophages, transposons [X] 0.65
COG3039Transposase and inactivated derivatives, IS5 familyMobilome: prophages, transposons [X] 0.65
COG1943REP element-mobilizing transposase RayTMobilome: prophages, transposons [X] 0.65
COG1853FMN reductase RutF, DIM6/NTAB familyEnergy production and conversion [C] 0.65
COG1733DNA-binding transcriptional regulator, HxlR familyTranscription [K] 0.65
COG0069Glutamate synthase domain 2Amino acid transport and metabolism [E] 0.65
COG1535Isochorismate hydrolaseSecondary metabolites biosynthesis, transport and catabolism [Q] 0.65
COG1508DNA-directed RNA polymerase specialized sigma subunit, sigma54 homologTranscription [K] 0.65
COG1402Creatinine amidohydrolase/Fe(II)-dependent FAPy formamide hydrolase (riboflavin and F420 biosynthesis)Coenzyme transport and metabolism [H] 0.65
COG1335Nicotinamidase-related amidaseCoenzyme transport and metabolism [H] 0.65
COG1304FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomeraseEnergy production and conversion [C] 0.65
COG0860N-acetylmuramoyl-L-alanine amidaseCell wall/membrane/envelope biogenesis [M] 0.65
COG0735Fe2+ or Zn2+ uptake regulation protein Fur/ZurInorganic ion transport and metabolism [P] 0.65
COG0312Zn-dependent protease PmbA/TldA or its inactivated homologGeneral function prediction only [R] 0.65
COG01223-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylaseReplication, recombination and repair [L] 0.65


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms64.52 %
UnclassifiedrootN/A35.48 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002568|C688J35102_120562291All Organisms → cellular organisms → Bacteria1183Open in IMG/M
3300004092|Ga0062389_104191113Not Available542Open in IMG/M
3300005437|Ga0070710_10257778All Organisms → cellular organisms → Bacteria1123Open in IMG/M
3300005454|Ga0066687_10366572Not Available827Open in IMG/M
3300005518|Ga0070699_101859544All Organisms → cellular organisms → Bacteria → Acidobacteria551Open in IMG/M
3300005529|Ga0070741_10030340All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter7593Open in IMG/M
3300005533|Ga0070734_10177827All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium1229Open in IMG/M
3300005534|Ga0070735_10514479All Organisms → cellular organisms → Bacteria713Open in IMG/M
3300005538|Ga0070731_11039013Not Available542Open in IMG/M
3300005541|Ga0070733_10257502All Organisms → cellular organisms → Bacteria1148Open in IMG/M
3300005541|Ga0070733_10356964Not Available970Open in IMG/M
3300005542|Ga0070732_10413668Not Available814Open in IMG/M
3300005542|Ga0070732_10961233All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300005554|Ga0066661_10839976Not Available537Open in IMG/M
3300005555|Ga0066692_10874345All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium551Open in IMG/M
3300005598|Ga0066706_11444543All Organisms → cellular organisms → Bacteria → Acidobacteria518Open in IMG/M
3300005602|Ga0070762_10473282Not Available818Open in IMG/M
3300005610|Ga0070763_10362531Not Available808Open in IMG/M
3300005610|Ga0070763_10909082All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae524Open in IMG/M
3300005890|Ga0075285_1009557Not Available1066Open in IMG/M
3300005921|Ga0070766_11215753All Organisms → cellular organisms → Bacteria521Open in IMG/M
3300006028|Ga0070717_11736728Not Available564Open in IMG/M
3300006102|Ga0075015_100196195All Organisms → cellular organisms → Bacteria1072Open in IMG/M
3300006102|Ga0075015_100779075All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium573Open in IMG/M
3300006162|Ga0075030_100719867Not Available789Open in IMG/M
3300006176|Ga0070765_100366267Not Available1341Open in IMG/M
3300006796|Ga0066665_10306904All Organisms → cellular organisms → Bacteria → Acidobacteria1278Open in IMG/M
3300006806|Ga0079220_12115961All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium504Open in IMG/M
3300006854|Ga0075425_102107233All Organisms → cellular organisms → Bacteria → Acidobacteria629Open in IMG/M
3300009090|Ga0099827_11074931All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium698Open in IMG/M
3300009143|Ga0099792_10194661All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1149Open in IMG/M
3300009174|Ga0105241_12484284Not Available518Open in IMG/M
3300009520|Ga0116214_1149848All Organisms → cellular organisms → Bacteria868Open in IMG/M
3300009644|Ga0116121_1191124Not Available650Open in IMG/M
3300009683|Ga0116224_10378771All Organisms → cellular organisms → Bacteria673Open in IMG/M
3300009698|Ga0116216_10012353All Organisms → cellular organisms → Bacteria5382Open in IMG/M
3300009698|Ga0116216_10642596Not Available638Open in IMG/M
3300009764|Ga0116134_1327522All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium526Open in IMG/M
3300009824|Ga0116219_10074731All Organisms → cellular organisms → Bacteria1990Open in IMG/M
3300010048|Ga0126373_11980659Not Available645Open in IMG/M
3300010048|Ga0126373_12397237Not Available587Open in IMG/M
3300010159|Ga0099796_10232435All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium759Open in IMG/M
3300010358|Ga0126370_10880380All Organisms → cellular organisms → Bacteria → Acidobacteria807Open in IMG/M
3300010376|Ga0126381_101095557All Organisms → cellular organisms → Bacteria1150Open in IMG/M
3300010376|Ga0126381_103879201All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium583Open in IMG/M
3300010403|Ga0134123_10205920All Organisms → cellular organisms → Bacteria1678Open in IMG/M
3300010937|Ga0137776_1861681Not Available948Open in IMG/M
3300011120|Ga0150983_12377696All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium968Open in IMG/M
3300011269|Ga0137392_10471197All Organisms → cellular organisms → Bacteria1043Open in IMG/M
3300011269|Ga0137392_11262621Not Available597Open in IMG/M
3300012189|Ga0137388_10447308All Organisms → cellular organisms → Bacteria1198Open in IMG/M
3300012198|Ga0137364_10327477All Organisms → cellular organisms → Bacteria → Acidobacteria1140Open in IMG/M
3300012208|Ga0137376_10962706Not Available732Open in IMG/M
3300012363|Ga0137390_10788781Not Available908Open in IMG/M
3300012923|Ga0137359_11073238All Organisms → cellular organisms → Bacteria → Acidobacteria689Open in IMG/M
3300012988|Ga0164306_11760827All Organisms → cellular organisms → Bacteria → Acidobacteria538Open in IMG/M
3300014489|Ga0182018_10401930All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium733Open in IMG/M
3300014489|Ga0182018_10630886Not Available561Open in IMG/M
3300014492|Ga0182013_10352403Not Available805Open in IMG/M
3300014501|Ga0182024_10800493Not Available1149Open in IMG/M
3300014501|Ga0182024_12848744Not Available514Open in IMG/M
3300014654|Ga0181525_10424500Not Available732Open in IMG/M
3300014655|Ga0181516_10325189Not Available783Open in IMG/M
3300015193|Ga0167668_1002794All Organisms → cellular organisms → Bacteria → Proteobacteria3760Open in IMG/M
3300016404|Ga0182037_10655214Not Available895Open in IMG/M
3300017924|Ga0187820_1250236Not Available569Open in IMG/M
3300017943|Ga0187819_10192146Not Available1207Open in IMG/M
3300017955|Ga0187817_10024312All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3631Open in IMG/M
3300017975|Ga0187782_10035042All Organisms → cellular organisms → Bacteria3650Open in IMG/M
3300018006|Ga0187804_10119334All Organisms → cellular organisms → Bacteria → Acidobacteria1095Open in IMG/M
3300018035|Ga0187875_10255411All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium956Open in IMG/M
3300018038|Ga0187855_10024934All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium3869Open in IMG/M
3300018040|Ga0187862_10460618Not Available771Open in IMG/M
3300018043|Ga0187887_10114192All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1623Open in IMG/M
3300018058|Ga0187766_10044895All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2587Open in IMG/M
3300018062|Ga0187784_10474058All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1009Open in IMG/M
3300018085|Ga0187772_10121444All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium1704Open in IMG/M
3300018088|Ga0187771_10329220All Organisms → cellular organisms → Bacteria1282Open in IMG/M
3300018468|Ga0066662_12411988Not Available553Open in IMG/M
3300019278|Ga0187800_1782703All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1866Open in IMG/M
3300019786|Ga0182025_1260251All Organisms → cellular organisms → Bacteria4610Open in IMG/M
3300020579|Ga0210407_11260333All Organisms → cellular organisms → Bacteria554Open in IMG/M
3300020583|Ga0210401_10694469Not Available878Open in IMG/M
3300020583|Ga0210401_10803553Not Available800Open in IMG/M
3300021046|Ga0215015_10919778Not Available880Open in IMG/M
3300021170|Ga0210400_10640465All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium876Open in IMG/M
3300021171|Ga0210405_10320321Not Available1224Open in IMG/M
3300021180|Ga0210396_11749302All Organisms → cellular organisms → Bacteria → Acidobacteria504Open in IMG/M
3300021402|Ga0210385_10655098All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium802Open in IMG/M
3300021402|Ga0210385_11241978All Organisms → cellular organisms → Bacteria → Acidobacteria571Open in IMG/M
3300021404|Ga0210389_10410112Not Available1065Open in IMG/M
3300021407|Ga0210383_10334305Not Available1304Open in IMG/M
3300021420|Ga0210394_10649069All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium926Open in IMG/M
3300021432|Ga0210384_10406051All Organisms → cellular organisms → Bacteria1227Open in IMG/M
3300021433|Ga0210391_10096005All Organisms → cellular organisms → Bacteria → Acidobacteria2338Open in IMG/M
3300021433|Ga0210391_10195703All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1590Open in IMG/M
3300021433|Ga0210391_10374577Not Available1117Open in IMG/M
3300021474|Ga0210390_10431419All Organisms → cellular organisms → Bacteria → Acidobacteria1113Open in IMG/M
3300021474|Ga0210390_11037735Not Available668Open in IMG/M
3300021479|Ga0210410_10555804All Organisms → cellular organisms → Bacteria → Acidobacteria1022Open in IMG/M
3300021479|Ga0210410_11769262All Organisms → cellular organisms → Bacteria → Acidobacteria512Open in IMG/M
3300021560|Ga0126371_12056748Not Available688Open in IMG/M
3300022525|Ga0242656_1065553All Organisms → cellular organisms → Bacteria → Acidobacteria656Open in IMG/M
3300025576|Ga0208820_1038770All Organisms → cellular organisms → Bacteria1402Open in IMG/M
3300025992|Ga0208775_1003683Not Available1072Open in IMG/M
3300026078|Ga0207702_12305386All Organisms → cellular organisms → Bacteria → Acidobacteria526Open in IMG/M
3300026333|Ga0209158_1067932Not Available1411Open in IMG/M
3300026334|Ga0209377_1275222All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium556Open in IMG/M
3300026490|Ga0257153_1102543Not Available567Open in IMG/M
3300026550|Ga0209474_10773549Not Available502Open in IMG/M
3300026998|Ga0208369_1019266All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium657Open in IMG/M
3300027070|Ga0208365_1001809All Organisms → cellular organisms → Bacteria2371Open in IMG/M
3300027070|Ga0208365_1035701Not Available659Open in IMG/M
3300027371|Ga0209418_1022689All Organisms → cellular organisms → Bacteria1059Open in IMG/M
3300027565|Ga0209219_1045238All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1099Open in IMG/M
3300027568|Ga0208042_1019540All Organisms → cellular organisms → Bacteria → Acidobacteria1747Open in IMG/M
3300027652|Ga0209007_1050518All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1056Open in IMG/M
3300027684|Ga0209626_1017507All Organisms → cellular organisms → Bacteria1686Open in IMG/M
3300027825|Ga0209039_10302111All Organisms → cellular organisms → Bacteria → Acidobacteria630Open in IMG/M
3300027826|Ga0209060_10373534Not Available649Open in IMG/M
3300027842|Ga0209580_10656584All Organisms → cellular organisms → Bacteria → Acidobacteria519Open in IMG/M
3300027854|Ga0209517_10059443All Organisms → cellular organisms → Bacteria2802Open in IMG/M
3300027854|Ga0209517_10245887Not Available1074Open in IMG/M
3300027867|Ga0209167_10069622All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1757Open in IMG/M
3300027867|Ga0209167_10236165Not Available979Open in IMG/M
3300027903|Ga0209488_10405894All Organisms → cellular organisms → Bacteria1008Open in IMG/M
3300027905|Ga0209415_10943439Not Available581Open in IMG/M
3300027905|Ga0209415_11141961All Organisms → cellular organisms → Bacteria503Open in IMG/M
3300027911|Ga0209698_10628156Not Available823Open in IMG/M
3300027911|Ga0209698_10703359All Organisms → cellular organisms → Bacteria → Acidobacteria769Open in IMG/M
3300028017|Ga0265356_1000979All Organisms → cellular organisms → Bacteria4552Open in IMG/M
3300028780|Ga0302225_10481007All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli580Open in IMG/M
3300028885|Ga0307304_10295566All Organisms → cellular organisms → Bacteria → Acidobacteria714Open in IMG/M
3300028906|Ga0308309_10634287Not Available928Open in IMG/M
3300028906|Ga0308309_10814219All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium811Open in IMG/M
3300029914|Ga0311359_10244680All Organisms → cellular organisms → Bacteria1530Open in IMG/M
3300030011|Ga0302270_10419850All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium710Open in IMG/M
3300030399|Ga0311353_10250357All Organisms → cellular organisms → Bacteria1642Open in IMG/M
3300030399|Ga0311353_10700471All Organisms → cellular organisms → Bacteria874Open in IMG/M
3300030494|Ga0310037_10282799All Organisms → cellular organisms → Bacteria711Open in IMG/M
3300030659|Ga0316363_10073656All Organisms → cellular organisms → Bacteria1565Open in IMG/M
3300031234|Ga0302325_10073357All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi6602Open in IMG/M
3300031708|Ga0310686_109586768All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae503Open in IMG/M
3300031718|Ga0307474_11577957All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300031754|Ga0307475_10011057All Organisms → cellular organisms → Bacteria6006Open in IMG/M
3300031754|Ga0307475_10141074All Organisms → cellular organisms → Bacteria → Acidobacteria1909Open in IMG/M
3300031946|Ga0310910_11184860Not Available593Open in IMG/M
3300031996|Ga0308176_11386983Not Available747Open in IMG/M
3300032074|Ga0308173_10921237All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium809Open in IMG/M
3300032143|Ga0315292_10852810All Organisms → cellular organisms → Bacteria761Open in IMG/M
3300032160|Ga0311301_11070456All Organisms → cellular organisms → Bacteria → Acidobacteria1054Open in IMG/M
3300032180|Ga0307471_100911858All Organisms → cellular organisms → Bacteria1046Open in IMG/M
3300032515|Ga0348332_12866811All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium640Open in IMG/M
3300032515|Ga0348332_13136723All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae508Open in IMG/M
3300032770|Ga0335085_11632845Not Available666Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil14.19%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil8.39%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil7.74%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil7.10%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil5.16%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil5.16%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil4.52%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds3.23%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland3.23%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil3.87%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland2.58%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment2.58%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.58%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.58%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa2.58%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland1.94%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost1.94%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.94%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil1.29%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog1.29%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.29%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil1.29%
PalsaEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa1.29%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog1.29%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter1.29%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment0.65%
SedimentEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment0.65%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.65%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil0.65%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.65%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.65%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.65%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.65%
PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland0.65%
BogEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Bog0.65%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.65%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.65%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.65%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.65%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.65%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005533Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1EnvironmentalOpen in IMG/M
3300005534Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1EnvironmentalOpen in IMG/M
3300005538Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1EnvironmentalOpen in IMG/M
3300005541Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1EnvironmentalOpen in IMG/M
3300005542Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1EnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300005610Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3EnvironmentalOpen in IMG/M
3300005890Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_104EnvironmentalOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006102Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013EnvironmentalOpen in IMG/M
3300006162Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012EnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009520Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaGEnvironmentalOpen in IMG/M
3300009644Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10EnvironmentalOpen in IMG/M
3300009683Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaGEnvironmentalOpen in IMG/M
3300009698Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaGEnvironmentalOpen in IMG/M
3300009764Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40EnvironmentalOpen in IMG/M
3300009824Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaGEnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010159Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300010937Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300014489Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaGEnvironmentalOpen in IMG/M
3300014492Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaGEnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014654Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaGEnvironmentalOpen in IMG/M
3300014655Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaGEnvironmentalOpen in IMG/M
3300015193Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb6, proglacial stream)EnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300017924Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5EnvironmentalOpen in IMG/M
3300017943Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4EnvironmentalOpen in IMG/M
3300017955Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2EnvironmentalOpen in IMG/M
3300017975Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018006Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4EnvironmentalOpen in IMG/M
3300018035Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10EnvironmentalOpen in IMG/M
3300018038Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10EnvironmentalOpen in IMG/M
3300018040Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150EnvironmentalOpen in IMG/M
3300018043Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10EnvironmentalOpen in IMG/M
3300018058Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MGEnvironmentalOpen in IMG/M
3300018062Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018085Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018088Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MGEnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300019278Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019786Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021046Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depthEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021402Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-OEnvironmentalOpen in IMG/M
3300021404Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021433Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-OEnvironmentalOpen in IMG/M
3300021474Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-OEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300022525Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300025576Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40 (SPAdes)EnvironmentalOpen in IMG/M
3300025992Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_104 (SPAdes)EnvironmentalOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)EnvironmentalOpen in IMG/M
3300026334Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)EnvironmentalOpen in IMG/M
3300026490Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-AEnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300026998Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF046 (SPAdes)EnvironmentalOpen in IMG/M
3300027070Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes)EnvironmentalOpen in IMG/M
3300027371Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027565Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027568Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027652Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027684Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027825Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)EnvironmentalOpen in IMG/M
3300027826Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027842Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027854Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)EnvironmentalOpen in IMG/M
3300027867Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300027905Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)EnvironmentalOpen in IMG/M
3300027911Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300028017Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4Host-AssociatedOpen in IMG/M
3300028780Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2EnvironmentalOpen in IMG/M
3300028885Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300029914III_Bog_E2 coassemblyEnvironmentalOpen in IMG/M
3300030011Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_3EnvironmentalOpen in IMG/M
3300030399II_Palsa_E2 coassemblyEnvironmentalOpen in IMG/M
3300030494Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)EnvironmentalOpen in IMG/M
3300030659Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)EnvironmentalOpen in IMG/M
3300031234Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031718Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031946Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172EnvironmentalOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300032074Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1EnvironmentalOpen in IMG/M
3300032143Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032515FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
C688J35102_12056229123300002568SoilGGAWWFGMKLPKIRGEARRLIMAQGMEGGAPAEEMSTPVVED*
Ga0062389_10419111313300004092Bog Forest SoilVMGAWWFGAQLPKIRAEARQLIIAQSMAGGEPAEEMTTRVAEE*
Ga0070710_1025777813300005437Corn, Switchgrass And Miscanthus RhizosphereGAWWFGTKLPKIRGEARRLIMAQGMQGGAPAEQMSTPVVED*
Ga0066687_1036657213300005454SoilSIIGAWWFGLQLPKIRGEARRLILAQAMAGGAPAEEMSTPVVQD*
Ga0070699_10185954413300005518Corn, Switchgrass And Miscanthus RhizosphereGAILFGNYLPKVRVEARRLIVAQEAAGGEPAVEMTAPIVEE*
Ga0070741_1003034083300005529Surface SoilRQLPKIRVEARRLIVAQAMAGGEPAEEMTARLVD*
Ga0070734_1017782723300005533Surface SoilWWFSIQLPKIRVEARKLIIAQSMAGGEPAEEMTKPVGEE*
Ga0070735_1051447923300005534Surface SoilVAGACWFGLQLPKIRVEARRLIVAQAVAGGEPSEMTAQAVED*
Ga0070731_1103901313300005538Surface SoilGLASVAGAWWFGVQLPKIRGEARKLILAQAMAGGEPAEEMSTPVVED*
Ga0070733_1025750213300005541Surface SoilAWWFAVQLPKIRVEARQLIMAQAMAGGGPAEEMSAPVAEE*
Ga0070733_1035696423300005541Surface SoilGLQLPRIRVEARQLIVAQGLTAGAPPEEMTAAVVDD*
Ga0070732_1041366813300005542Surface SoilWWFGVQLPKIRVEARQLIVAQAMAGGDPAEEMTAHVVED*
Ga0070732_1096123323300005542Surface SoilALFWLRLPAFRVEARRLIVAQAVAGGDPPEEMTARVVEDE*
Ga0066661_1083997633300005554SoilSVQLPKIRVEARQLIVAQAMAGGEPSEEMTAPVVED*
Ga0066692_1087434513300005555SoilIRLPSLRVEGKQLILAQAMAGGEPSEEMTARVVD*
Ga0066706_1144454313300005598SoilGLRLPKIRGEARQLIIAQGMVGGEPVQEMTARVVEE*
Ga0070762_1047328223300005602SoilVASVAGAAWFGLQLPKIRVEARRLIVAQAAAGGEPSEMTAQAIED*
Ga0070763_1036253123300005610SoilGAWWFGVQLPKIRVEARRLIVAQAMAGGEPAEEMTAPVAED*
Ga0070763_1090908223300005610SoilCGAWWFSTQLPKIRIEARQLIMAQGMVGGEPSEQMTARVVED*
Ga0075285_100955713300005890Rice Paddy SoilIASIAGAWWFGVQLPKIRGEARRLIQAQAMAGGAPAEGMSTPVVED*
Ga0070766_1121575323300005921SoilWFGLQLPKIRVEARRLMVAQAVVGGEPSEMTAQAVED*
Ga0070717_1173672823300006028Corn, Switchgrass And Miscanthus RhizosphereVFGAWWFSIQLPKVRAEARKLIIAQAMAGGEPAEEMTNPIPED*
Ga0075015_10019619513300006102WatershedsWWFSLQLPKIRAEARQLIMAQAMAGGEPAEEMMTPVVED*
Ga0075015_10077907513300006102WatershedsLFGLQLPKIRVEARQLIIAQGMTAGAPPEEMTTRVAED*
Ga0075030_10071986713300006162WatershedsAQLPKIRGEARRLIVAQNMAGGQPAEEMSTPVAEE*
Ga0070765_10036626713300006176SoilGATLFGLQLPKIRVEARQLIVAQGLTAGAPPEEMSAGVVED*
Ga0066665_1030690423300006796SoilIFGLRLPKIRGEARQLIIAQGMVGGEPVQEMTTEVVEE*
Ga0079220_1211596123300006806Agricultural SoilGVQLPKIRVEARRLIVAQAMAGGEPAEEMSTPVVEE*
Ga0075425_10210723313300006854Populus RhizosphereFGIRLPKLRVEARRLIVAQGMVGGEPAQEMTARVVED*
Ga0099827_1107493113300009090Vadose Zone SoilWWFSVQLPKIRVEARQLIVAQAMAGGGPSEEMTAPVVED*
Ga0099792_1019466123300009143Vadose Zone SoilMGAWWFALQLPKIRVEARQLIMAQAAAGGEPAEMTAAVAED*
Ga0105241_1248428423300009174Corn RhizosphereGGAWWFGTKLPKIRGEARRLIMAQGMQGGAPAEQMSTPVVED*
Ga0116214_114984823300009520Peatlands SoilFGLQLPKIRVEARQLIIAQGMTAGAPPEEMTARVVED*
Ga0116121_119112423300009644PeatlandGIGGMASVAGAAWFWAQLPKIRLEARRLMVAQAIAGGEPSEMTAQAVED*
Ga0116224_1037877113300009683Peatlands SoilALFGLQLPKIRVEARQLIIAQGMTAGAPPEEMTARVVED*
Ga0116216_1001235313300009698Peatlands SoilGLQLPKIRVEARQLIIAQGMTAGAPPEEMTARVVQD*
Ga0116216_1064259613300009698Peatlands SoilAAQLPKIRVEARRLIVAQAMAGGEPAEEMSAPVVEE*
Ga0116134_132752213300009764PeatlandWWFSVQLPKIRVEARKLIIAQAMAGGEPSEEMTAPVAED*
Ga0116219_1007473153300009824Peatlands SoilGWFAMHLPKIRVEARKLILAQQMAGGEPAAGVTAPVGED*
Ga0126373_1198065923300010048Tropical Forest SoilWFNAHLPKVRAEARKLIIAQAMAGGEPAEEMSNPIPED*
Ga0126373_1239723713300010048Tropical Forest SoilSVQLPKVRAEARKLIIAQTMVAGEPAQAMSTPVVED*
Ga0099796_1023243523300010159Vadose Zone SoilACWFGLQLPKIRVEARRLIVAQAVGGGEPSEMTTQAVDD*
Ga0126370_1088038013300010358Tropical Forest SoilISGAILFGTYLPKVRVEARRLIVAQEAAGGEPAVEVTAPITEE*
Ga0126381_10109555723300010376Tropical Forest SoilGLAAVAGAWWFGVQLPKIRGEARRLILAQAMTGGEPAEEMSTPVVEE*
Ga0126381_10387920113300010376Tropical Forest SoilRFLRHLPKIRVEARRLMVAQAAAGGEPAVEMTSRLNDD*
Ga0134123_1020592013300010403Terrestrial SoilGLNLPKIRTEARQLIIAQSVAGGEPSEETSSASVLAAKQ*
Ga0137776_186168123300010937SedimentALQLPKIRVEARQLIIAQSMAGGEPSEEMSAPVAEE*
Ga0150983_1237769623300011120Forest SoilAGWFRLQLPKIRVEARRLIVAQAVAGGEPSEMTAQAVED*
Ga0137392_1047119723300011269Vadose Zone SoilCIGAAVLFGMRLPSLQVEGRQLILAQAVAGGEPSEEMTARVVD*
Ga0137392_1126262123300011269Vadose Zone SoilLFGIRLPSLRVEGKQLILAQAMAGGEPSEEMTARVVD*
Ga0137388_1044730813300012189Vadose Zone SoilFGLQLPKIRVEARRLIVAQAAAGGEPSEMTTQAVED*
Ga0137364_1032747723300012198Vadose Zone SoilGIHLPKVRVEARRLIVAQEAAGGEPAVEITASIVEE*
Ga0137376_1096270613300012208Vadose Zone SoilSQQLPKVRAEARQLIMAQAMAPGEPAEEMTTPVVEVKED*
Ga0137390_1078878123300012363Vadose Zone SoilVAGACWFGLQLPKIRVEARLLIVAQAVGGGEPSEMTTQVVED*
Ga0137359_1107323813300012923Vadose Zone SoilHLPKIRVEGRRLIVAQEVAGGEPSVEMTARVVED*
Ga0164306_1176082723300012988SoilACMGAAVLFFFHLPKIRVEARQLILAQDVAGREPPVEMTARGVEDN*
Ga0182018_1040193023300014489PalsaAGWFARHLPKIRVEARRLIVAQAAGGGEPSEMTAQAVED*
Ga0182018_1063088613300014489PalsaLHLPKIRVEARRLIVAQAAAGGEPSEMTAQAVED*
Ga0182013_1035240313300014492BogTFYRYLPKIRVEARQLIVEQTAISGEPPQEMTARVVKD*
Ga0182024_1080049323300014501PermafrostGLQLPKIRVEGRQLIIAQGMTGGAPAEEMTARVVED*
Ga0182024_1284874423300014501PermafrostAWWFGAQLPKIRVEARKLIIAQAMAGGEPSEEMTAPVAEE*
Ga0181525_1042450013300014654BogFGLQLPKICVEARRLMVAQAVVGGEPSEEMSAQAVED*
Ga0181516_1032518913300014655BogWWFSVQLPKIRVEARQLIIAQAMAGGEPAEEMTTPV*
Ga0167668_100279413300015193Glacier Forefield SoilHLPKIREEARQLILAQEVAGGEPSGEMTARVVEDN*
Ga0182037_1065521423300016404SoilWFSLQLPKVRAEARQLILAQAMAPGEPAEEVTTPVVED
Ga0187820_125023613300017924Freshwater SedimentFGLQLPKIRVEARQLIIAQGMTAGAPPEEMTTRVVED
Ga0187819_1019214633300017943Freshwater SedimentGLQLPKIRVEARQLIIAQGMTAGAPPEEMTARVVDD
Ga0187817_1002431213300017955Freshwater SedimentLQLPKIRVEARQLIIAQGMTAGAPPEEMTTRVVED
Ga0187782_1003504213300017975Tropical PeatlandMGAVWFGMQLPQIRVEARKLILAQQMAGGEPAAGVTAPVAEK
Ga0187804_1011933433300018006Freshwater SedimentFWLQLPKIRIEARRLIVAQAMAGGDPAEEMTARVVED
Ga0187875_1025541113300018035PeatlandMGAWWFARQLPKIRAEARQLIIAQSMAGGEPSEEMTAPVADD
Ga0187855_1002493423300018038PeatlandGACWFGLQLPKIRVEARRLIVAQNVAGGEPSEMTAQAVED
Ga0187862_1046061813300018040PeatlandLQLPKIRVEARQLIIAQGMTAGAPPEEMTARVVED
Ga0187887_1011419233300018043PeatlandAVQLPKIRVEARQLIIAQSMAGGEPSEEMTAPVAEE
Ga0187766_1004489543300018058Tropical PeatlandWFWAHWPKIRVEARQLIVAQAMTGGEPAENMTSRVVED
Ga0187784_1047405813300018062Tropical PeatlandLAGAGWFALHLPKIRIEARRLIVAQHVAGGEPVEMTTQPVKE
Ga0187772_1012144423300018085Tropical PeatlandGMHLPKIRVEARRLIMAQQMAGGEPASGVTTGTVED
Ga0187771_1032922023300018088Tropical PeatlandGGIWFATHLPKIRVEARRLILAQQMAGGAPAEGVTAVPED
Ga0066662_1241198823300018468Grasslands SoilWWFGMQLPKIRGEARRLIIAQNMAGGQPSEEMSTPVAED
Ga0187800_178270323300019278PeatlandACWFGLQLPKIRIEARRLIVAQAVAGGEPSEMTTQMVEE
Ga0182025_126025173300019786PermafrostVAGAAWFWFQLPKIRVEARRLIVAQAAAGGEPAEMSAQAVED
Ga0210407_1126033323300020579SoilMGAWWFSVQLPKIRVEARRLIVAQAMAGGEPSEEMTGPVAEE
Ga0210401_1069446913300020583SoilWFGLQLPKIRVEARRLIVAQAAAGGEPPEMTVQAVEE
Ga0210401_1080355323300020583SoilCLGGATLFGLQLPKIRVEARQLIIAQGMTAGAPPEEMTARVVDE
Ga0215015_1091977833300021046SoilVWFGLHLPKIRVEERQLIVAQAMAGGEPAEEMTTPVVDE
Ga0210400_1064046513300021170SoilGAWWFGVQFPKVRGEAIKLIVAQQMAGGEPAEEMTVPVVKN
Ga0210405_1032032133300021171SoilTLFGLQLPKIRMEARQLIVAQGLTAGAPPEEMIARVVED
Ga0210396_1174930213300021180SoilLGGAVSVLGAVWFGMQLPQIRGEARKLIMAQQMAGGEPSAGVTGPVEEK
Ga0210385_1065509813300021402SoilVWFRFQLPKIRVEARRLIVAQAAAGGEPAEMTSQTVEGDA
Ga0210385_1124197813300021402SoilSVMGAWWFAVQLPKIRVEARQLIMAQAMAGGGPAEEMSAPVAEK
Ga0210389_1041011213300021404SoilLQLPKIRVEARQLIVAQGMTAGAPPEEMTARVVED
Ga0210383_1033430523300021407SoilALFGLQLPKIRLEARQLIVAQGMAAGQPPEEMTARVAED
Ga0210394_1064906913300021420SoilSAQLPKIRVEARRLIIAQSMAGGEPSEEMTAPVGEE
Ga0210384_1040605113300021432SoilIGGLASFAGACWFGVQLPKIRVEARRLIVAQAAGSEPPEMTVQAVGD
Ga0210391_1009600513300021433SoilFGLQLPKIRVEARQLIVAQGMTAGSPPEEMTAGVVED
Ga0210391_1019570333300021433SoilGGAALFGLQLPKIRVEARQLIIAQGMTAGAPPEEMTARVVED
Ga0210391_1037457733300021433SoilVLGAGWFWLQLPKIRVEARRLIFAQNMAGGEPTDMTAQAVED
Ga0210390_1043141913300021474SoilISFFYHLPKIRIEARRLIVAQAIAGGEPSAEMTARVVED
Ga0210390_1103773523300021474SoilGLQLPKIRVEARQLIIAQGMTAGAPPEEMTARVVDE
Ga0210410_1055580413300021479SoilAWWFAVQLPKIRVEARQLIMAQAMAGGGPAEEMSAPVAEK
Ga0210410_1176926223300021479SoilASIVGACWFGLQLPKIRVEARRLIVAQAAAGGEPPEMTVQAVED
Ga0126371_1205674813300021560Tropical Forest SoilWFNAHLPKVRAEARKLIIAQAMAGGEPAEEMTPPVAED
Ga0242656_106555313300022525SoilVMGAWWFAVQLPKIRVEARQLIMAQAMAGGGPAEEMSAPVAEK
Ga0208820_103877013300025576PeatlandFGMYLPRIRVEARRLILAQQMTGGEPAAGVTARMGEE
Ga0208775_100368313300025992Rice Paddy SoilGGIASIAGAWWFGVQLPKIRGEARRLIQAQAMAGGAPAEGMSTPVVED
Ga0207702_1230538613300026078Corn RhizosphereFHLPKIRVEARQLIFAQEVAGGEPSVEMTARVVED
Ga0209158_106793213300026333SoilASLAGAWWFSVQLPKIRVEARQLIVAQAMSGGGPSQEMTAPLVED
Ga0209377_127522213300026334SoilGIRLPSLRVEGKQLILAQAMAGGEPSEEMTARVVD
Ga0257153_110254313300026490SoilIFGLHLPRIRDEARRLIVAQQMVGGEPASEMTVRVVED
Ga0209474_1077354913300026550SoilFGMKLPKIRGEARRLMMAQGMEGGAPAEEMSTPVVED
Ga0208369_101926623300026998Forest SoilGKQLPVFRGEARQLIIAQAMAGGEPAEEMTARVVQ
Ga0208365_100180933300027070Forest SoilGAGWFALQLPKIRVEARRLIVAQAAGGGEPAEMTVQAVED
Ga0208365_103570123300027070Forest SoilGGAALFGLQLPKIRVEARQLIVAQGMAGAPPEEMTARVVED
Ga0209418_102268923300027371Forest SoilSIQLPKVRAEARQLIIAQAMAGGQPAEGMTTPIVED
Ga0209219_104523813300027565Forest SoilALFGLQLPKIRVEGRQLIIAQSMAAGAPAEEMTAGVVED
Ga0208042_101954013300027568Peatlands SoilMHLPKIRVEARKLILAQQMAGGEPAAGVTAPVGED
Ga0209007_105051833300027652Forest SoilAWWFGVQLPKIRVEARRLIVAQAMAGGEPAEEMTGPVAED
Ga0209626_101750723300027684Forest SoilGLQLPKIRVEARKLIIAQAMAGGEPSEEMTAPVVEE
Ga0209039_1030211123300027825Bog Forest SoilFGLQLPKIRVEARRLIVAQAVAGGEPSEMTAQVVED
Ga0209060_1037353423300027826Surface SoilAWWFGVQLPKIRGEARKLIMAQAMAGGEPAEEMSTPVVED
Ga0209580_1065658423300027842Surface SoilGAWWFGMQLPKIRAEARQLIVAQAMAGGEPAEEMNTPLGDE
Ga0209517_1005944313300027854Peatlands SoilAGRFAMHLPKIRVEARKLILAQQMAGGEPAAGVTAPVGED
Ga0209517_1024588713300027854Peatlands SoilLFGLQLPKIRVEARQLIIAQGMTAGAPPEEMTARVVDE
Ga0209167_1006962213300027867Surface SoilLGAWWFAAQLPKIRVEARQLIMAQAMATGGPAEEMSAPVAED
Ga0209167_1023616513300027867Surface SoilAALFGLQLPRIRVEARQLIVAQGLTAGAPPEEMTAAVVDD
Ga0209488_1040589423300027903Vadose Zone SoilMGAWWFALQLPKIRVEARQLIMAQAAAGGEPAEMTAAVAED
Ga0209415_1094343923300027905Peatlands SoilSVQLPKVRAEARKLIIAQAMAGGEPAEEMTKPLTED
Ga0209415_1114196113300027905Peatlands SoilFGLQLPKIRVEARQLIIAQGMTAGAPPEEMTARVVED
Ga0209698_1062815613300027911WatershedsVLFFFHLPKIRVEARQLIVAQEVAGGEPSLEMTARVVED
Ga0209698_1070335913300027911WatershedsFGMQLPKIRAEARQLIVAQAMAGGEPAEEMNTPVRDG
Ga0265356_100097963300028017RhizosphereWFGVQLPKIRVEARRLIVAQAMAGGEPAEEMTAPVAEES
Ga0302225_1048100723300028780PalsaAVQLPKIRVEARQLIVAQSMAGGEPSEEMTAPVAED
Ga0307304_1029556613300028885SoilGGAIWFGLTLPKVRVEARRLIVAQSMAGGEPAEDLTARIAE
Ga0308309_1063428713300028906SoilAAWFAMHLPKIRVEARQLIMAQAMAGGEPAEEMTARIRET
Ga0308309_1081421913300028906SoilIAGACWFGLQLPKIRVEARRLILAQEVAGGEPSDMMAQAVED
Ga0311359_1024468023300029914BogGGVASVAGACWFGLQLPKIRVEARRLIVAQASAAGEPPEMAAQAVED
Ga0302270_1041985033300030011BogGWFARHLPKIRVEARRLIVAQAAGGGEPAEMTAQAVED
Ga0311353_1025035713300030399PalsaFARHLPKIRVEARRLIVAQAAGGGEPSEMTAQAVED
Ga0311353_1070047113300030399PalsaFSTQLPKIRIEARQLIIAQSMSGGAPAEQMSARVVD
Ga0310037_1028279913300030494Peatlands SoilFGLQLPKIRVEARQLIIAQGMTAGAPPEEMTARVVQD
Ga0316363_1007365643300030659Peatlands SoilAGAGRFAMHLPKIRVEARKLILAQQMAGGEPAAGVTAPVGED
Ga0302325_1007335713300031234PalsaAGWFARHLPKIRVEARRLIVAQAAGGGEPSEMTAQAVED
Ga0310686_10958676823300031708SoilWFAVQLPKIRVEARQLIVAQSMAGGEPSEEMTAPVAEE
Ga0307474_1157795713300031718Hardwood Forest SoilWWFAVQLPKIRVEARRLIMAQAAAGGEPAEMTAAVAED
Ga0307475_1001105743300031754Hardwood Forest SoilAGWFGLQLPKIRVEARRLIVAQAVAGGEPSEMTTQAVED
Ga0307475_1014107413300031754Hardwood Forest SoilGAWWFSLQLPKIRAEARQLIVAQAMAGGEPAEEMTTRLVDE
Ga0310910_1118486023300031946SoilSAQLPKIRVEARRLIMAQSMAGAEPAGEMPNPVPEE
Ga0308176_1138698313300031996SoilIAGAWWFGMKLPKIRGEARRLILAQGMEGGAPAEEMSTPVVED
Ga0308173_1092123723300032074SoilAWFLRHLPKIRVEARRLIVAQAIAGGEPSVEMTSRLDDD
Ga0315292_1085281013300032143SedimentMGGAVWFGLSLPTFRVEARRLIVAQAVAGGEPSEEMTADLVEE
Ga0311301_1107045613300032160Peatlands SoilAAQLPKIRVEARRLIVAQAMAGGEPAEEMSAPVVEE
Ga0307471_10091185813300032180Hardwood Forest SoilSVLGAWWFSKQLPKVRAEARRLIMAHAMAAGEPAEEMTTPLAED
Ga0348332_1286681113300032515Plant LitterAGAAWFWAQLPKIRVEARRLIVAQAAAGGEPSEMVTQAVED
Ga0348332_1313672313300032515Plant LitterAWWFAVQLPKIRVEARQLIVAQSMAGGEPSEEMTAPVAEE
Ga0335085_1163284513300032770SoilSLQLPKVRAEARRLIIAQAMAGGEPAEEMTNPIPED


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