NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F044002

Metagenome / Metatranscriptome Family F044002

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F044002
Family Type Metagenome / Metatranscriptome
Number of Sequences 155
Average Sequence Length 112 residues
Representative Sequence MKKKMPANLRKLLEWLDGVSPLLETQIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRISDRETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI
Number of Associated Samples 149
Number of Associated Scaffolds 155

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 67.10 %
% of genes near scaffold ends (potentially truncated) 32.90 %
% of genes from short scaffolds (< 2000 bps) 81.29 %
Associated GOLD sequencing projects 139
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (63.226 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(29.032 % of family members)
Environment Ontology (ENVO) Unclassified
(36.129 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(40.000 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 46.15%    β-sheet: 0.00%    Coil/Unstructured: 53.85%
Feature Viewer
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 155 Family Scaffolds
PF03466LysR_substrate 18.06
PF00126HTH_1 6.45
PF14384BrnA_antitoxin 4.52
PF01068DNA_ligase_A_M 3.23
PF00239Resolvase 1.94
PF03401TctC 0.65
PF00011HSP20 0.65
PF07690MFS_1 0.65
PF02798GST_N 0.65
PF10129OpgC_C 0.65

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 155 Family Scaffolds
COG1423ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) familyReplication, recombination and repair [L] 3.23
COG1793ATP-dependent DNA ligaseReplication, recombination and repair [L] 3.23
COG1961Site-specific DNA recombinase SpoIVCA/DNA invertase PinEReplication, recombination and repair [L] 1.94
COG2452Predicted site-specific integrase-resolvaseMobilome: prophages, transposons [X] 1.94
COG0071Small heat shock protein IbpA, HSP20 familyPosttranslational modification, protein turnover, chaperones [O] 0.65
COG3181Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctCEnergy production and conversion [C] 0.65


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A63.23 %
All OrganismsrootAll Organisms36.77 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459010|GIO7OMY02JTJ14Not Available501Open in IMG/M
2199352025|deepsgr__Contig_183290All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1771Open in IMG/M
3300001991|JGI24743J22301_10027861All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1104Open in IMG/M
3300002459|JGI24751J29686_10119242Not Available554Open in IMG/M
3300002568|C688J35102_120180016All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria914Open in IMG/M
3300004114|Ga0062593_100381636Not Available1249Open in IMG/M
3300004798|Ga0058859_10019701Not Available806Open in IMG/M
3300004801|Ga0058860_12188525Not Available808Open in IMG/M
3300005104|Ga0066818_1019379Not Available559Open in IMG/M
3300005146|Ga0066817_1003752All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria996Open in IMG/M
3300005158|Ga0066816_1021130Not Available550Open in IMG/M
3300005163|Ga0066823_10098074Not Available597Open in IMG/M
3300005169|Ga0066810_10005314All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1687Open in IMG/M
3300005185|Ga0066811_1015227Not Available613Open in IMG/M
3300005328|Ga0070676_11444075Not Available529Open in IMG/M
3300005335|Ga0070666_10354351All Organisms → cellular organisms → Bacteria1050Open in IMG/M
3300005336|Ga0070680_101780306Not Available534Open in IMG/M
3300005339|Ga0070660_100071547All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2708Open in IMG/M
3300005341|Ga0070691_10305238Not Available871Open in IMG/M
3300005347|Ga0070668_100323690All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1298Open in IMG/M
3300005353|Ga0070669_100789424Not Available807Open in IMG/M
3300005355|Ga0070671_100146200All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1995Open in IMG/M
3300005356|Ga0070674_100831528Not Available800Open in IMG/M
3300005366|Ga0070659_100527798Not Available1008Open in IMG/M
3300005367|Ga0070667_100362191Not Available1314Open in IMG/M
3300005440|Ga0070705_100980133Not Available685Open in IMG/M
3300005444|Ga0070694_100525178Not Available945Open in IMG/M
3300005455|Ga0070663_100106351All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2101Open in IMG/M
3300005546|Ga0070696_100944253Not Available718Open in IMG/M
3300005549|Ga0070704_100118196All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2030Open in IMG/M
3300005719|Ga0068861_100070930All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2699Open in IMG/M
3300005843|Ga0068860_100041161All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales4413Open in IMG/M
3300006038|Ga0075365_11033739All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium579Open in IMG/M
3300006237|Ga0097621_100310083All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1396Open in IMG/M
3300006573|Ga0074055_11681225Not Available955Open in IMG/M
3300006576|Ga0074047_12008056All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1233Open in IMG/M
3300006578|Ga0074059_10003142Not Available723Open in IMG/M
3300006581|Ga0074048_10031701Not Available751Open in IMG/M
3300006605|Ga0074057_11242574Not Available829Open in IMG/M
3300006953|Ga0074063_10114227All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1575Open in IMG/M
3300009036|Ga0105244_10360023Not Available670Open in IMG/M
3300009092|Ga0105250_10342236All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium653Open in IMG/M
3300009098|Ga0105245_12486325Not Available571Open in IMG/M
3300009156|Ga0111538_10270740All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2149Open in IMG/M
3300009545|Ga0105237_10156769All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2274Open in IMG/M
3300009551|Ga0105238_10904104Not Available901Open in IMG/M
3300010371|Ga0134125_11989900Not Available632Open in IMG/M
3300010399|Ga0134127_10766075Not Available1011Open in IMG/M
3300010399|Ga0134127_11144626Not Available843Open in IMG/M
3300010999|Ga0138505_100002522All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1682Open in IMG/M
3300012476|Ga0157344_1031577Not Available510Open in IMG/M
3300012892|Ga0157294_10286539Not Available521Open in IMG/M
3300012907|Ga0157283_10112878Not Available748Open in IMG/M
3300012941|Ga0162652_100026714Not Available842Open in IMG/M
3300012951|Ga0164300_10032723All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1925Open in IMG/M
3300012957|Ga0164303_10023163All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2432Open in IMG/M
3300012961|Ga0164302_10039282All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2254Open in IMG/M
3300012961|Ga0164302_11746379Not Available523Open in IMG/M
3300012984|Ga0164309_10045613All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2508Open in IMG/M
3300012986|Ga0164304_11778648Not Available515Open in IMG/M
3300013096|Ga0157307_1028089Not Available964Open in IMG/M
3300013297|Ga0157378_11693861Not Available679Open in IMG/M
3300013306|Ga0163162_10091694All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3122Open in IMG/M
3300013308|Ga0157375_10201396All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2147Open in IMG/M
3300014326|Ga0157380_10091269All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2514Open in IMG/M
3300014745|Ga0157377_10040646All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2576Open in IMG/M
3300015077|Ga0173483_10115258All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1141Open in IMG/M
3300015200|Ga0173480_10184053All Organisms → cellular organisms → Bacteria1094Open in IMG/M
3300015372|Ga0132256_101860342Not Available709Open in IMG/M
3300015373|Ga0132257_100251646Not Available2110Open in IMG/M
3300015373|Ga0132257_102013234Not Available745Open in IMG/M
3300015374|Ga0132255_100125897Not Available3531Open in IMG/M
3300017792|Ga0163161_10091112All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2256Open in IMG/M
3300017965|Ga0190266_10095475All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum1206Open in IMG/M
3300018031|Ga0184634_10170470Not Available983Open in IMG/M
3300018055|Ga0184616_10362905Not Available545Open in IMG/M
3300018061|Ga0184619_10145482Not Available1080Open in IMG/M
3300018066|Ga0184617_1115335Not Available763Open in IMG/M
3300018067|Ga0184611_1006657All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3092Open in IMG/M
3300018067|Ga0184611_1280433Not Available583Open in IMG/M
3300018072|Ga0184635_10051357Not Available1592Open in IMG/M
3300018073|Ga0184624_10066545Not Available1493Open in IMG/M
3300018073|Ga0184624_10160958Not Available991Open in IMG/M
3300018074|Ga0184640_10009810All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3395Open in IMG/M
3300018081|Ga0184625_10280689Not Available871Open in IMG/M
3300018082|Ga0184639_10131781Not Available1326Open in IMG/M
3300018469|Ga0190270_10660525Not Available1030Open in IMG/M
3300018476|Ga0190274_10246132Not Available1617Open in IMG/M
3300018481|Ga0190271_11180593Not Available888Open in IMG/M
3300019356|Ga0173481_10031895Not Available1697Open in IMG/M
3300021078|Ga0210381_10019215All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1793Open in IMG/M
3300021082|Ga0210380_10072338Not Available1506Open in IMG/M
3300021510|Ga0222621_1107632Not Available592Open in IMG/M
3300022694|Ga0222623_10318819Not Available596Open in IMG/M
3300022756|Ga0222622_10024676All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3118Open in IMG/M
3300025321|Ga0207656_10191233All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria985Open in IMG/M
3300025903|Ga0207680_10500921Not Available865Open in IMG/M
3300025905|Ga0207685_10145922Not Available1066Open in IMG/M
3300025907|Ga0207645_10041950All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2928Open in IMG/M
3300025908|Ga0207643_10021286All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3561Open in IMG/M
3300025917|Ga0207660_11354877Not Available577Open in IMG/M
3300025920|Ga0207649_11499855Not Available534Open in IMG/M
3300025923|Ga0207681_10264854All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1347Open in IMG/M
3300025932|Ga0207690_11009632Not Available692Open in IMG/M
3300025933|Ga0207706_10876434Not Available759Open in IMG/M
3300025941|Ga0207711_10942048Not Available802Open in IMG/M
3300025986|Ga0207658_10984030Not Available769Open in IMG/M
3300026075|Ga0207708_10020669All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales4966Open in IMG/M
3300026095|Ga0207676_10252353All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1588Open in IMG/M
3300026121|Ga0207683_10072105All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3054Open in IMG/M
3300026557|Ga0179587_11132827Not Available515Open in IMG/M
3300026995|Ga0208761_1019137Not Available642Open in IMG/M
3300027288|Ga0208525_1040669Not Available578Open in IMG/M
3300027310|Ga0207983_1001981All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2168Open in IMG/M
3300027907|Ga0207428_10151007All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1768Open in IMG/M
3300028712|Ga0307285_10073113Not Available880Open in IMG/M
3300028713|Ga0307303_10014291All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1455Open in IMG/M
3300028715|Ga0307313_10114161All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales825Open in IMG/M
3300028716|Ga0307311_10233615Not Available544Open in IMG/M
3300028718|Ga0307307_10021702All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1780Open in IMG/M
3300028719|Ga0307301_10027977All Organisms → cellular organisms → Bacteria → Proteobacteria1678Open in IMG/M
3300028721|Ga0307315_10053859Not Available1125Open in IMG/M
3300028722|Ga0307319_10337323Not Available501Open in IMG/M
3300028771|Ga0307320_10146225Not Available913Open in IMG/M
3300028778|Ga0307288_10314212Not Available625Open in IMG/M
3300028782|Ga0307306_10007103All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2342Open in IMG/M
3300028784|Ga0307282_10065631All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1642Open in IMG/M
3300028787|Ga0307323_10213072Not Available697Open in IMG/M
3300028790|Ga0307283_10244429Not Available526Open in IMG/M
3300028791|Ga0307290_10024218All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2131Open in IMG/M
3300028810|Ga0307294_10042571Not Available1294Open in IMG/M
3300028819|Ga0307296_10184560All Organisms → cellular organisms → Bacteria → Proteobacteria1130Open in IMG/M
3300028819|Ga0307296_10610064Not Available597Open in IMG/M
3300028824|Ga0307310_10490502Not Available618Open in IMG/M
3300028828|Ga0307312_10934554Not Available574Open in IMG/M
3300028878|Ga0307278_10148931Not Available1048Open in IMG/M
3300030945|Ga0075373_10230677Not Available508Open in IMG/M
3300030990|Ga0308178_1081765Not Available658Open in IMG/M
3300031093|Ga0308197_10154556Not Available741Open in IMG/M
3300031094|Ga0308199_1065246Not Available742Open in IMG/M
3300031114|Ga0308187_10115733Not Available853Open in IMG/M
3300031199|Ga0307495_10061997Not Available798Open in IMG/M
3300031226|Ga0307497_10308270Not Available728Open in IMG/M
3300031231|Ga0170824_118696724Not Available1118Open in IMG/M
3300031366|Ga0307506_10441278Not Available541Open in IMG/M
3300031455|Ga0307505_10146795All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1076Open in IMG/M
3300031474|Ga0170818_108994106All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2737Open in IMG/M
3300031740|Ga0307468_102336157Not Available520Open in IMG/M
3300031847|Ga0310907_10203769Not Available947Open in IMG/M
3300032122|Ga0310895_10620420Not Available556Open in IMG/M
3300032205|Ga0307472_101151357Not Available738Open in IMG/M
3300033551|Ga0247830_10638611Not Available844Open in IMG/M
3300034147|Ga0364925_0396895Not Available523Open in IMG/M
3300034150|Ga0364933_010865All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2108Open in IMG/M
3300034151|Ga0364935_0321854Not Available512Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil29.03%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil10.32%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment7.74%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere5.16%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.52%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere3.87%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.94%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.94%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment1.94%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.94%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.94%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.94%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.94%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment1.29%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil1.29%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.29%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.29%
SoilEnvironmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil1.29%
Host-AssociatedHost-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated1.29%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere1.29%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.29%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.29%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.29%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.29%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.29%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil0.65%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.65%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil0.65%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.65%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.65%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.65%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.65%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.65%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.65%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere0.65%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.65%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.65%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.65%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459010Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)EnvironmentalOpen in IMG/M
2199352025Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOILEnvironmentalOpen in IMG/M
3300001991Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2Host-AssociatedOpen in IMG/M
3300002459Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6Host-AssociatedOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004798Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300004801Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300005104Soil and rhizosphere microbial communities from Laval, Canada - mgHACEnvironmentalOpen in IMG/M
3300005146Soil and rhizosphere microbial communities from Laval, Canada - mgHABEnvironmentalOpen in IMG/M
3300005158Soil and rhizosphere microbial communities from Laval, Canada - mgHAAEnvironmentalOpen in IMG/M
3300005163Soil and rhizosphere microbial communities from Laval, Canada - mgHMBEnvironmentalOpen in IMG/M
3300005169Soil and rhizosphere microbial communities from Laval, Canada - mgHPAEnvironmentalOpen in IMG/M
3300005185Soil and rhizosphere microbial communities from Laval, Canada - mgHPBEnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006038Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5Host-AssociatedOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006573Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006576Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006578Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006581Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006605Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006953Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009036Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaGHost-AssociatedOpen in IMG/M
3300009092Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaGHost-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010999Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t3i015EnvironmentalOpen in IMG/M
3300012476Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.6.yng.070610Host-AssociatedOpen in IMG/M
3300012892Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1EnvironmentalOpen in IMG/M
3300012907Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1EnvironmentalOpen in IMG/M
3300012941Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300013096Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2EnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300015077Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)EnvironmentalOpen in IMG/M
3300015200Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)EnvironmentalOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300017965Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 TEnvironmentalOpen in IMG/M
3300018031Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1EnvironmentalOpen in IMG/M
3300018055Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_coexEnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018066Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1EnvironmentalOpen in IMG/M
3300018067Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coexEnvironmentalOpen in IMG/M
3300018072Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2EnvironmentalOpen in IMG/M
3300018073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1EnvironmentalOpen in IMG/M
3300018074Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2EnvironmentalOpen in IMG/M
3300018081Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1EnvironmentalOpen in IMG/M
3300018082Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2EnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300021078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redoEnvironmentalOpen in IMG/M
3300021082Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redoEnvironmentalOpen in IMG/M
3300021510Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coexEnvironmentalOpen in IMG/M
3300022694Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coexEnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300025321Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025986Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300026995Soil and rhizosphere microbial communities from Laval, Canada - mgLAB (SPAdes)EnvironmentalOpen in IMG/M
3300027288Soil and rhizosphere microbial communities from Laval, Canada - mgHMC (SPAdes)EnvironmentalOpen in IMG/M
3300027310Soil and rhizosphere microbial communities from Laval, Canada - mgHMB (SPAdes)EnvironmentalOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300028712Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139EnvironmentalOpen in IMG/M
3300028713Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184EnvironmentalOpen in IMG/M
3300028715Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203EnvironmentalOpen in IMG/M
3300028716Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198EnvironmentalOpen in IMG/M
3300028718Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194EnvironmentalOpen in IMG/M
3300028719Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182EnvironmentalOpen in IMG/M
3300028721Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355EnvironmentalOpen in IMG/M
3300028722Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368EnvironmentalOpen in IMG/M
3300028771Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369EnvironmentalOpen in IMG/M
3300028778Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142EnvironmentalOpen in IMG/M
3300028782Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193EnvironmentalOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300028787Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381EnvironmentalOpen in IMG/M
3300028790Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_122EnvironmentalOpen in IMG/M
3300028791Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144EnvironmentalOpen in IMG/M
3300028810Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151EnvironmentalOpen in IMG/M
3300028819Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153EnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300028878Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117EnvironmentalOpen in IMG/M
3300030945Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 EcM (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030990Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031093Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031094Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_203 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031114Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031199Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_SEnvironmentalOpen in IMG/M
3300031226Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_SEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031366Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_SEnvironmentalOpen in IMG/M
3300031455Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_SEnvironmentalOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031847Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4EnvironmentalOpen in IMG/M
3300032122Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M
3300034147Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17EnvironmentalOpen in IMG/M
3300034150Sediment microbial communities from East River floodplain, Colorado, United States - 25_j17EnvironmentalOpen in IMG/M
3300034151Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
F62_015338302170459010Grass SoilKKKMPANLRKLLEWLDGASPLLETQIVAAGLSHTLDKALMRNFAEMNLREATVSITAPGRDALSKTAASLPAYRRGRSLQSAIRDGALRTSVWPRGGACI
deepsgr_031403502199352025SoilMKXXXPANLRKLLEWLDGVSPLLETKIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRISDRETAASLPAYRRGRSLQSAIRDGAWRTSVWPRGGACI
JGI24743J22301_1002786133300001991Corn, Switchgrass And Miscanthus RhizosphereMPANLRKLLEWLDRASPLLETQIVADGLSHTLDKALMRNFAEMNLRAATVSITARGRDALSKFPVTCLPTSPRISDWETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI*
JGI24751J29686_1011924213300002459Corn, Switchgrass And Miscanthus RhizosphereMKKKMPANLRKLLEWLDRASPLLETQIVADGLSHTLDKALMRNFAEMNLRAATVSITARGRDALSKFPVTCLPTSPRISDWETAASLPVPVTCLPTSPRISDWETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI*
C688J35102_12018001633300002568SoilMKKKMPANLRKLLEWLDRASPLLETQIVADGLSHTLDKALMRNFAEMNLRAATVSITARGRDALSKLPVTCLPTSPRISDWETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI*
Ga0062593_10038163633300004114SoilMKKKMPANLRKLLEWLDGACPLLETQIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTCPRISDRETAASLPAYRRGRSPQSAMPDGAWRTNLWPRGGACI*
Ga0058859_1001970113300004798Host-AssociatedMKKKMPANLRKLLEWLDRASPLLETQIVADGLSHTLDKALMRNFAEMNLRAATVSITARGRDALSKFPVTCLPTSPRISDWETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI*
Ga0058860_1218852523300004801Host-AssociatedMKKKMPANLRKLLEWLDRASPLLETQIVADGLSHTLDKALMRNFAEMNLRAATVSITARGRDALSKLSVTCLPTSPRISDWETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI*
Ga0066818_101937913300005104SoilMKKKMPANLRKLLEWLDGVSPLLETKIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRIGDRETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI*
Ga0066817_100375233300005146SoilMKKKMPANLRKLLEWLDGVSPLLETKIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRIGDRETAASLPAYRRGRSLQSAMPDGAWRTNLRPRGGACI*
Ga0066816_102113023300005158SoilMPANLRKLLEWLDGVSPLPETKIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRISDWETAASLPAYRRGRSLQSAMPDGAWRTSLW
Ga0066823_1009807423300005163SoilMKKKMPANLRKLLEWLDGVSPLLETKIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKISVTCLRTSPRISDRGTAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI*
Ga0066810_1000531413300005169SoilMKKKMPANLRKLLEWLDRASPLLETQIVADGLSHTLDKALMRNFAEMNLREATVSITAPGRDALSKFPVTCLPTSPRISDWETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI*
Ga0066811_101522713300005185SoilMKKKMPANLRKLLEWLDGASPLLETQIVADGLSHTLDKALMRNFAEMNLRAATVSITARGRDALSKLPVTCLPTSPRISDWETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI*
Ga0070676_1144407513300005328Miscanthus RhizosphereIVAAGLSHTLDKALMRNFAEMNLRAATVSITARGRDALSKFPVTCLPTSPRVSDRETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI*
Ga0070666_1035435113300005335Switchgrass RhizosphereMKKKMPANLRKLLEWLDGACPLLETQIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRISDRETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI*
Ga0070680_10178030613300005336Corn RhizosphereMPANLRKLLEWLDGVSPLLETQIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTCPRISDRETAASLPAYRRGRSPQSAMPDGAWRTNLWPRGGA
Ga0070660_10007154733300005339Corn RhizosphereMKKKMPANLRKLLEWLDGACPLLETQIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRISDWETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI*
Ga0070691_1030523823300005341Corn, Switchgrass And Miscanthus RhizosphereEGVCMKKKMPANLRKLLEWLDRASPLLETQIVADGLSHTLDKALMRNFAEMNLRAATVSITARGRDALSKFPVTCLPTCPRISDRETAASLPAYRRGRSPQSAMPDGAWRTNLWPRGGACI*
Ga0070668_10032369013300005347Switchgrass RhizosphereMKKKMPANLRKLLEWLDGVSPLLETKIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLRTSPRISDRGTAASLPAYRRGRSLQSAMPDGAWRTSLWPR
Ga0070669_10078942423300005353Switchgrass RhizosphereMPANLRKLLEWLDGVSPLLETKIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRISDRETAASLPAYRRGRSLQSAMPDCAWRTSLWPRGGACI*
Ga0070671_10014620073300005355Switchgrass RhizosphereANLRKLLEWLDRASPLLETQIVADGLSHTLDKALMRNFAEMNLRAATVSITARGRDALSKFPVTCLPTSPRISDWETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI*
Ga0070674_10083152823300005356Miscanthus RhizosphereMPANLRKLLEWLDGVSPLLETQIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTCPRISDRETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI*
Ga0070659_10052779823300005366Corn RhizosphereMKKKMPANLRKLLEWLDGVSPLLETQIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTCPRISDRETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI*
Ga0070667_10036219113300005367Switchgrass RhizosphereIVAAGLSHTLDKALMRNFAEMNLRAATVSITARGRDALSKFPVTCLPTSPRISDWETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI*
Ga0070705_10098013323300005440Corn, Switchgrass And Miscanthus RhizosphereMKKKMPANLRKLLEWLDGVSPLLETKIVAAGLSHTLDKALMRNFAEMNLRAATVSITARGRDALSKLPVTCLPTSPRISDWETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI*
Ga0070694_10052517813300005444Corn, Switchgrass And Miscanthus RhizosphereMKKKMPANLRKLLEWLDRASPLLETQIVADGLSHTLDKALMRNFAEMNLRAATVSITARGRDALSKFPVTCLPTSPRVSDRETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI*
Ga0070663_10010635113300005455Corn RhizosphereMKKKMPANLRKLLEWLDGACPLLETQIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRISDRETAASLPAYRRGRSLQSAMPDGA
Ga0070696_10094425323300005546Corn, Switchgrass And Miscanthus RhizosphereMKKKMPANLRKLLEWLDRASPLLETQIVADGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLRTSPRISDRGTAASLPAYRRGRSLQSAMPD
Ga0070704_10011819613300005549Corn, Switchgrass And Miscanthus RhizosphereMKKKMPANLRKLLEWLDGVSPLLETKIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRISDWETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI*
Ga0068861_10007093093300005719Switchgrass RhizosphereMKKKMPANLRKLLEWLDRASPLLETQIVADGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRVSDRETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI*
Ga0068860_10004116153300005843Switchgrass RhizosphereMKKKMPANLRKLLEWLDGVSPLLETQIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRISDWETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI*
Ga0075365_1103373913300006038Populus EndosphereGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLRTSPRISDRGTAASLPAYRRGRSLQSAIRDGAWRTSVWPRGGACI*
Ga0097621_10031008313300006237Miscanthus RhizosphereGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRISDWETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI*
Ga0074055_1168122533300006573SoilASPLLETQIVADGLSHTLDKALMRNFAEMNLRAATVSITARGRDALSKFPVTCLPTSPRIGDRETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI*
Ga0074047_1200805623300006576SoilMPANLRKLLEWLDGVSPLLETQIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRISDWETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI*
Ga0074059_1000314213300006578SoilGVCMKKKMPANLRKLLEWLDRASPLLETQIVADGLSHTLDKALMRNFAEMNLRAATVSITARGRDALSKFPVTCLPTSPRISDWETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI
Ga0074048_1003170133300006581SoilMARWGFPLLETQIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRVSDRETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI*
Ga0074057_1124257413300006605SoilMKKKMPANLRKLLEWLDGVSPLLETQIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRIGDRETAASLPAYRRGRSLQSAMPDGAWRTNLWPRGGACI*
Ga0074063_1011422723300006953SoilMKKKMPANLRKLLEWLDGVSPLLETQIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRVSDRETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI*
Ga0105244_1036002313300009036Miscanthus RhizosphereMPANLRKLLEWLDRASPLLETQIVADGLSHTLDKALMRNFAEMNLRAATVSITARGRDALSKLPVTCLPTSPRISDWETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI*
Ga0105250_1034223623300009092Switchgrass RhizosphereMKKKMPANLRKLLEWLDGVSPLLETKIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRISDRETAASLPAYRRGRSLQSAMPDCAWRTSLWPRGGACI*
Ga0105245_1248632513300009098Miscanthus RhizosphereMKKKMPANLRKLLEWLDGVSPLLETQIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKISVTCLRTSPRISDRGTAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI*
Ga0111538_1027074013300009156Populus RhizosphereMKKKMPANLRKLLEWLDRASPLLETQIVADGLSHTLDKALMRNFAEMNLRAATVSITARGRDALSKISVTCLRTSPRISDRGTAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI*
Ga0105237_1015676933300009545Corn RhizosphereMKKKMPANLRKLLEWLDRASPLLETQIVADGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTCPRISDRETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI*
Ga0105238_1090410423300009551Corn RhizosphereMKKKMPANLRKLLEWLDGVSPLLETQIVAAGLSHTLDKALMRSFAEMNLREATVSITARGRDALSKFPVTCLPTSPRISDWETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI*
Ga0134125_1198990013300010371Terrestrial SoilLHEEKTPANLRKLLEWLDGVSPLLETQIVAAGLSHTLDKALMRNFAEMNLRAATVSITARGRDALSKFPVTCLPTSPRISDWETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI*
Ga0134127_1076607533300010399Terrestrial SoilMKKKMPANLRKLLEWLDGVSPLLETKIVVAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKISVTCLRTSPRISDRGTAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI*
Ga0134127_1114462613300010399Terrestrial SoilMKKKMPANLRKLLEWLDRASPLLETQIVADGLSHTLDKALMRNFAEMNLRAATVSITARGRDALSKFPVTCLPTSPRISDWETAASLPAYRRGRSLQSAMPD
Ga0138505_10000252243300010999SoilMKKKMPANLCKLLEWLDGASPLLETQIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRIGDRETAASLPAYRRGRSLQSAMPDGAWRTNLWP
Ga0157344_103157723300012476Arabidopsis RhizosphereMKKKMPANLRKLLEWLDGVSPLLETQIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKISVTCHRTSPRISDRGTAASLPAYRRGRSLQ
Ga0157294_1028653923300012892SoilPLLETQIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTCPRISDRETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI*
Ga0157283_1011287823300012907SoilMKKKTPANLRKLLEWLDGACPLLETQIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRISDRETAASLPAYRRRRSLQSAMPDGAWRTSLWPRGGACI*
Ga0162652_10002671413300012941SoilMKKKMPANLCKLLEWLDGVSPLLETKIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRISDRETAASLPAYRRGRSLQSAMPDCAWRTSLWPRGGACI*
Ga0164300_1003272313300012951SoilMKKKMPANLRKLLEWLDRASPLLETQIVADGLSHTLDKALMRNFAEMNLRAATVSITARGRDALSKFPVTCLPTSPRISDRETAASLPAYRRGRSLQSAMPDCAWRTSLWPRGGACI*
Ga0164303_1002316313300012957SoilMKKKMPANLRKLLEWLDGASPLLETQIVADGLSHTLDKALMRNFAEMNLRAATVSITARGRDALSKFPVTCLSTSPRISDWETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI*
Ga0164302_1003928253300012961SoilMKKKMPANLRKLLEWLDRASPLLETQIVADGLSHTLDKALMRNFAEMNLRAATVSITARGRDALSKLPVTCLPTSPRISDWETAASLPAYRRGRSLQSAMPDGAWRT
Ga0164302_1174637913300012961SoilMKKKMPANLRKLLEWLDGVSPLLETQIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRISDWETAASLPAYRRGRSLQSAMPDGAWRT
Ga0164309_1004561373300012984SoilMKKKMPANLRKLLEWLDGVSPLLETQIVAAGLSHTLDKALMRNFAGMNLRAATVSITARGRDALSKFPVTCLPTSPRISDWETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI*
Ga0164304_1177864813300012986SoilMKKKMPANLRKLLEWLDGASPLLETQLVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALGKFPVTCLRTSPRIGERGTAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGAC
Ga0157307_102808913300013096SoilMKKKMPANLRKLLEWLDGACPLLETQIVAAGLSHTLDKALMRNFAEMNLRAATVSITARGRDALSKFPVTCLPTSPRISDWETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI*
Ga0157378_1169386113300013297Miscanthus RhizosphereMKKKMPANLRKLLEWLDGVSPLLETQIVAAGLSHTLDKALMRNFAEMNLRAATVSITARGRDALSKFPVTCLPTSPRISDWETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI*
Ga0163162_1009169493300013306Switchgrass RhizosphereEWLDGVSPLLETQIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRVSDRETAASLPAYRRGRSLQSAMPDCAWRTSLWPRGGACI*
Ga0157375_1020139623300013308Miscanthus RhizosphereMKKKMPANLRKLLEWLDRASPLLETQIVADGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRISDWETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI*
Ga0157380_1009126963300014326Switchgrass RhizosphereMKKKMPANLRKLLEWLDGVSPLLETQIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRVSDRETAASLPAYRRGRSLQSAMPDCAWRTSLWPRGGACI*
Ga0157377_1004064653300014745Miscanthus RhizosphereMKKKMPANLRKLLEWLDGACPLLETQIVAAGLSHTLDKALMRNFAEMNLRAATVSITARGRDALSKLPVTCLPTSPRISDWETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI*
Ga0173483_1011525833300015077SoilMKKKMPANLRKLLEWLDRASPLLETQIVADGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTCPRISDRETAASLPAYRRGRSPQSAMPDGAWRTNLWPRGGACI*
Ga0173480_1018405323300015200SoilMKKKMPANLRKLLEWLDGACPLLETQIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTCPRISDRETAASLPAYRRGRSPQSAMPDGAWRTSLWPRGGACI*
Ga0132256_10186034213300015372Arabidopsis RhizosphereMKKKMPANLRKLLEWLDGVSPLLETQIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKISVTCLRTSPRIGERGTAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGA
Ga0132257_10025164643300015373Arabidopsis RhizosphereMKKKMPANLRKLLEWLDGVSPLLETKIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKISVTCLRTSPRIGERGTAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI*
Ga0132257_10201323413300015373Arabidopsis RhizosphereMKKKMPANLRKLLEWLDRASPLLETQIVADGLSHTLDKALMRNFAEMNLRAATVSITARGRDALSKFPVTCLPTSPRISDWETAASLPAYRRGRSLQSAMP
Ga0132255_10012589733300015374Arabidopsis RhizosphereMKKKMPANLRKLLEWLDGVSPLLETQIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKISVTCLRTSPRIGERGTAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI*
Ga0163161_1009111213300017792Switchgrass RhizosphereMKKKTPANLRKLLEWLDGVSPLLETQIVAAGLSHTLDKALMRNFAEMNLRAATVSITARGRDALSKFPVTCLPTSPRISDWETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI
Ga0190266_1009547513300017965SoilMKKKMPANLRKLLEWLDGVSPLLETKIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRISDRETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGPCI
Ga0184634_1017047023300018031Groundwater SedimentMKKKMPANLRKLLEWLDGVSPLLETKIVAAGLSHTLDKALMRNFAEMNLRAATVSITARGRDALSKFPVTCLPTCPRISDRETAASLPAYRRGRSLQSAIRDGAWRTSVWPRGGACI
Ga0184616_1036290513300018055Groundwater SedimentMKKKMPANLRKLFEWLDGVSPLLETQIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRVSDRETAASLPAYRRGRSLQSAMPDCAWRTSLWPRGGACI
Ga0184619_1014548223300018061Groundwater SedimentMKKKMPANLRKLLEWLDGVSPLLETKIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRISDRETAASLPAYRRGRSLQSAMPDGAWRTNLWPRGGACI
Ga0184617_111533523300018066Groundwater SedimentMKKKMPANLRKLLEWLDGASPLLETQIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLRTSPRISDRGTAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI
Ga0184611_100665763300018067Groundwater SedimentMKKKMPANLRKMLEWLDGVSPLLETKIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLRTSPRISDRETAASLPAYRRGRSLQSAIRDGAWRTSVWPRGGACT
Ga0184611_128043313300018067Groundwater SedimentMPANLRKLLEWLDGVSPLLETQIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRIGDRETAASLPAYRRGRSLQSAMPDGAWRTNLWPRGGACI
Ga0184635_1005135733300018072Groundwater SedimentMKKKMPANLCKLLEWLDGASPLLETQIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRIGDRETAASLPAYRRGRSLQSAMPDGAWRTNLWPRGGACI
Ga0184624_1006654513300018073Groundwater SedimentIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRVSDRETAASLPAYRRGRSLQSAMPDCAWRTSLWPRGGACI
Ga0184624_1016095823300018073Groundwater SedimentMKKKMPANLRKLLEWLDGVSPLLETKIVADGLSHTLDKALMRNFVEMNLREATVSITARGRDALSKFPVTCLRTSPRISDRETAASLPAYRRGRSLQSAIRDGAWRTSVWPRGGACT
Ga0184640_1000981043300018074Groundwater SedimentMKKKMPANLRKLLEWLDGVSPLLETKIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRVSDRETAASLPAYRRGRSLQSAMPDGAWRTNLWPRGGACI
Ga0184625_1028068923300018081Groundwater SedimentMKKKMPANLRKLLEWLDGVSPLLETKIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLRTSPRISDRETAASLPAYRRGRSLQSAMPDGAWRTNLWPRGGACI
Ga0184639_1013178123300018082Groundwater SedimentMKKKMPANLRKLLEWLDGVSPLLETKIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLRTSPRISDRETAASLPAYRRGRSLQSAMPDCAWRTSLWPRGGACI
Ga0190270_1066052523300018469SoilLLETKIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLRTSPRISDRGTAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI
Ga0190274_1024613223300018476SoilMKKKMPANLRKLLEWLDGASPLLETQIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRVSDRETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGPCI
Ga0190271_1118059313300018481SoilMKKKMPANLRKLLEWLDGVSPLLETQIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALRKFPVTCLRTSPRISDRGTAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI
Ga0173481_1003189533300019356SoilMKKKMPANLRKLLEWLDRASPLLETQIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTCPRISDRETAASLPAYRRGRSPQSAMPDGAWRTNLWPRGGACI
Ga0210381_1001921523300021078Groundwater SedimentMPANLRKLLEWLDGASPLLETQIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRISDWETAASLPAYRRGRSLQSAMPDGAWRTNLWPRGGACI
Ga0210380_1007233823300021082Groundwater SedimentMKKKMPANLRKLLEWLDGVSPLLETQIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRVSDRETAASLPAYRRGRSLQSAMPDCAWRTSLWPRGGACI
Ga0222621_110763213300021510Groundwater SedimentMPANLRKLLEWLDGASPLLETQIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRISDWETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI
Ga0222623_1031881923300022694Groundwater SedimentLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRIGDRETAASLPAYRRGRSLQSAIRDGAWRTSVWPRGGACI
Ga0222622_1002467613300022756Groundwater SedimentMKKKMPANLCKLLEWLDGASPLLETQIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRIGDRETAASLPAYRRGRSLQSAMPD
Ga0207656_1019123333300025321Corn RhizosphereMKKKMPANLRKLLEWLDRASPLLETQIVADGLSHTLDKALMRNFAEMNLRAATVSITARGRDALSKFPVTCLPTSPRISDWETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI
Ga0207680_1050092123300025903Switchgrass RhizosphereMKKKMPANLRKLLEWLDGACPLLETQIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRISDRETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI
Ga0207685_1014592223300025905Corn, Switchgrass And Miscanthus RhizosphereMPANLRKLLEWLDRASPLLETQIVADGLSHTLDKALMRNFAEMNLRAATVSITARGRDALSKFPVTCLPTSPRISDWETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI
Ga0207645_1004195013300025907Miscanthus RhizosphereMKKKMPANLRKLLEWLDGACPLLETQIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRVSDRETAASLPAYRRGRSLQSAMPDCAWRTSLWPRGGACI
Ga0207643_1002128663300025908Miscanthus RhizosphereMKKKMPANLRKLLEWLDRASPLLETQIVADGLSHTLDKALMRNFAEMNLRAATVSITARGRDALSKLPVTCLPTSPRISDWETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI
Ga0207660_1135487713300025917Corn RhizosphereMKKKMPANLRKLLEWLDGVSPLLETKIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALGKFPVTCLPTCPRISDRETAASLPAYRRGRSPQSAMPDGAWRTNLWPRGGACI
Ga0207649_1149985523300025920Corn RhizosphereCMKKKMPANLRKLLEWLDRASPLLETQIVADGLSHTLDKALMRNFAEMNLRAATVSITARGRDALSKLPVTCLPTSPRISDWETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI
Ga0207681_1026485433300025923Switchgrass RhizosphereMKKKMPANLRKLLEWLDRASPLLETQIVADGLSHTLDKALMRNFAEMNLRAATVSITARGRDALSKLPVTCLPTSPRISDWETAASLPAYRRGRSLQSAMPDCAWRTSLWPRGGACI
Ga0207690_1100963213300025932Corn RhizosphereMKKKMPANLRKLLEWLDGVSPLLETQIVAAGLSHTLDKALMRNFAEMNLRAATVSITARGRDALSKLPVTCLPTSPRISDWETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI
Ga0207706_1087643423300025933Corn RhizosphereMKKKMPANLRKLLEWLDGVSPLLETQIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRISDWETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI
Ga0207711_1094204813300025941Switchgrass RhizosphereKLLEWLDRASPLLETQIVADGLSHTLDKALMRNFAEMNLRAATVSITARGRDALSKFPVTCLPTSPRISDWETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI
Ga0207658_1098403013300025986Switchgrass RhizosphereSEGVCMKKKMPANLRKLLEWLDGVSPLLETQIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRVSDRETAASLPAYRRGRSLQSAMPDCAWRTSLWPRGGACI
Ga0207708_1002066953300026075Corn, Switchgrass And Miscanthus RhizosphereMKKKMPANLRKLLEWLDRASPLLETQIVADGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRISDWETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI
Ga0207676_1025235313300026095Switchgrass RhizosphereVCMKKKMPANLRKLLEWLDRASPLLETQIVADGLSHTLDKALMRNFAEMNLRAATVSITARGRDALSKLPVTCLPTSPRISDWETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI
Ga0207683_1007210543300026121Miscanthus RhizosphereMKKKMPANLRKLLEWLDGACPLLETQIVAAGLSHTLDKALMRNFAEMNLRAATVSITARGRDALSKLPVTCLPTSPRISDWETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI
Ga0179587_1113282713300026557Vadose Zone SoilMANLPADLRKLLEWLDRVSPLFEAQIVAAGFNQTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRISDRETAASLPAYRRGRSLQSAMPDGAWRTRLWPRGGACI
Ga0208761_101913713300026995SoilMKKKMPANLRKLLEWLDGVSPLLETKIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRIGDRETAASLPAYRRGRSLQSAMPDGAWRTNLWPRGGACI
Ga0208525_104066923300027288SoilMKKKTPANLRKLLEWLDRASPLLETQIVADGLSHTLDKALMRNFAEMNLRAATVSITARGRDALSKFPVTCLPTSPRISDWETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI
Ga0207983_100198153300027310SoilMKKKMPANLRKLLEWLDGVSPLLETKIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKISVTCLRTSPRISDRGTAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI
Ga0207428_1015100713300027907Populus RhizosphereMKKKMPANLRKLLEWLDRASPLLETQIVADGLSHTLDKALMRNFAEMNLRAATVSITARGRDALSKLSVTCLPTSPRISDWETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI
Ga0307285_1007311323300028712SoilMKKKMPANLCKLLEWLDGASPLLETQIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRISDWETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI
Ga0307303_1001429143300028713SoilMKKKMPANLRKLLEWLDGVSPLLETQIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRIGDRETAASLPAYRRGRSLQSAMPDGAWRTNLWPRGGACI
Ga0307313_1011416123300028715SoilNLRKLLEWLDGVSPLLETKIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRISDWETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI
Ga0307311_1023361513300028716SoilPLLETKIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRISDWETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI
Ga0307307_1002170213300028718SoilMKKKMPANLRKLLEWLDGVSPLLETKIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLRTSPRISDRGTAASLPAYHRGRSLQSAIRDGAWRTSVWPRGGACI
Ga0307301_1002797723300028719SoilEEKMPANLRKLLEWLDGASPLLETQIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRISDWETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI
Ga0307315_1005385933300028721SoilVSPLFEAQIVAAGFNQTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRIGDRETAASLPAYRRGRSLQSAMPDGAWRTNLWPRGGACI
Ga0307319_1033732323300028722SoilLLEWLDGASPLLETQIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRIGDRETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI
Ga0307320_1014622513300028771SoilMKKKMPVNLRKLLEWLDGASPLLETQIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRISDWETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI
Ga0307288_1031421213300028778SoilEWLDGVSPLLETKIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRIGDRETAASLPAYRRGRSLQSAMPDGAWRTNLWPRGGACI
Ga0307306_1000710343300028782SoilMKKKMPANLCKLLEWLDGTSPLLETQIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLRTSPRISDRGTAASLPAYHRGRSLQSAIRDGAWRTSVWPRGGACI
Ga0307282_1006563123300028784SoilMKKKMPANLCKLLEWLDGASPLLETQIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRIGDRETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI
Ga0307323_1021307223300028787SoilMKKKMPANLRKLLEWLDGASPLLETQIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLRTSPRISDRGTAASLPAYHRGRSLQSAIRDGAWRTSVWPRGGACI
Ga0307283_1024442913300028790SoilLEWLDGASPLLETQIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRISDWETAASLPAYRRGRSLQSAMPDGAWRTNLWPRGGACI
Ga0307290_1002421853300028791SoilMKKKMPANLRKLLEWLDGVSPLLETKIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRISDWETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI
Ga0307294_1004257113300028810SoilLLETQIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRISDWETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI
Ga0307296_1018456013300028819SoilIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRISDWETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI
Ga0307296_1061006413300028819SoilVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRIGDRETAASLPAYRRGRSLQSAMPDGAWRTNLWPRGGACI
Ga0307310_1049050223300028824SoilMKKKMPANLRKLLEWLDGVSPLLETKIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLRTSPRISDRGTAASLPAYRRGRSLQSAIRDGAWRTSVWPRGGACI
Ga0307312_1093455413300028828SoilLCKLLEWLDGVSPLLETKIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLRTSPRISDRGTAASLPAYHRGRSLQSAIRDGAWRTSVWPRGGACI
Ga0307278_1014893133300028878SoilCMKKMPANLRKLLEWLDGVSPLLEAQIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTRLPTSPRISDGGTAASLPAYRRGQSLQSASRSLQSASRDAAWRTRLWPLGAI
Ga0075373_1023067723300030945SoilMKKKMPANLRKLLEWLDGASPLVETQIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKTAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI
Ga0308178_108176513300030990SoilMPANLRKLLEWLDGVSPLLETQIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRIGDRETAASLPAYRRGRSLQSAMPDGAWRTNL
Ga0308197_1015455623300031093SoilMKKKMPANLRKLLEWLDGASPLLETQIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRISDWETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI
Ga0308199_106524623300031094SoilMKKKMPANLRKLLEWLDGVSPLLETKIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLRTSPRISDRGTAASLPAYRRGRSLQSAIPDGASCTTPSPRAGS
Ga0308187_1011573313300031114SoilMKKKMPANLRKLLEWLDGASPLLETQIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLRTSPRISDRETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI
Ga0307495_1006199723300031199SoilVAAGLSHTLDKALMQNFAEMNLREATVSITARGRDALSKFPVTCLPTCPRISDRETAASLPAYRRGRSLQSAMPDGAWRTNLWPRGGACI
Ga0307497_1030827023300031226SoilMKKKMPANLRKLLEWLDGASPLVETQIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRISDWETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI
Ga0170824_11869672413300031231Forest SoilMKKMPANLRKLLEWLDGVSPLLETKIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRIGDRETAASLPAYRRGRSLQSAMPDGAWRTNLWPRGGACI
Ga0307506_1044127813300031366SoilMKKKMPANLRKLLEWLDGASPLLETQIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVACLPTSPRISDWETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI
Ga0307505_1014679523300031455SoilMKKKMPANLRKLLEWLDRASPLLETQIVADGLSHTLDKALMRNFAEMNLRAATVSITARGRDALSKFPVTCLPTSPRVSDRETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI
Ga0170818_10899410653300031474Forest SoilMKKKMPANLRKLLEWLDGASPLLETQIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRIGDRETAASLPAYRRGRSLQSAMPDGAWRTNLWPRGGACI
Ga0307468_10233615713300031740Hardwood Forest SoilVCMKKKMPANLRKLLEWLDGVSPLPETKIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLRTSLRISDRETAASLPAYRRGRSLQSAMPDGAWRTSVWPRGGACI
Ga0310907_1020376913300031847SoilRLTAATSAWSSSRLGGLQRKALLETQIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRVSDRETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI
Ga0310895_1062042013300032122SoilMKKKMPANLRKLLEWLDGVSPLLETQIVAAGLSHTLDKALMRNFAEMNLRAATVSITARGRDALSKFPVTCLPTSPRISDWETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI
Ga0307472_10115135713300032205Hardwood Forest SoilMKKKMPTNLRKLLEWLDGASPLLETQIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLRTSLRISDRETAASLPAYRRGRSLQSAMPDGAWRTSVWPRGGACI
Ga0247830_1063861123300033551SoilMKKKMPANLRKLLEWLDGVSPLLETQIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRISDRETAASLPAYRRGRSLQSAMPDGAWRTSLWPRGGACI
Ga0364925_0396895_2_2653300034147SedimentGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRVSDRETAASLPAYRRGRSLQSAMPDCAWRTSLWPRGGACI
Ga0364933_010865_1525_18783300034150SedimentMKKKMPANLRKLLEWLDGVSPLLETKIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRVSDRETAASLPAYRRGRSLQSAMPDCAWRTSLWPRGGPCI
Ga0364935_0321854_154_4953300034151SedimentMPANLRKLLEWLDGVSPLLETQIVAAGLSHTLDKALMRNFAEMNLREATVSITARGRDALSKFPVTCLPTSPRISDRETAASLPAYRRGRSLQSAMPDCAWRTSLWPRGGACI


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.