Metagenome / Metatranscriptome Family F043950

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F043950
Family Type	Metagenome / Metatranscriptome
Number of Sequences	155
Average Sequence Length	48 residues
Representative Sequence	MSQVTHNIYTIYASYDTKYCSFGRFFGKKNGILPCKQDAELNMVIKILI
Number of Associated Samples	133
Number of Associated Scaffolds	155

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	41.94 %
% of genes from short scaffolds (< 2000 bps)	65.16 %
Associated GOLD sequencing projects	119
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.23

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (66.452 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh (23.871 % of family members)
Environment Ontology (ENVO)	Unclassified (55.484 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (92.258 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 18.18% β-sheet: 25.97% Coil/Unstructured: 55.84%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.23
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.23
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 155 Family Scaffolds
PF00436	SSB	42.58
PF00521	DNA_topoisoIV	30.32
PF03989	DNA_gyraseA_C	12.26
PF01134	GIDA	4.52
PF01467	CTP_transf_like	4.52
PF04430	DUF498	1.29
PF07549	Sec_GG	1.29
PF05673	DUF815	0.65
PF02355	SecD_SecF	0.65
PF02699	YajC	0.65
PF01288	HPPK	0.65

COG ID	Name	Functional Category	% Frequency in 155 Family Scaffolds
COG0188	DNA gyrase/topoisomerase IV, subunit A	Replication, recombination and repair [L]	42.58
COG0629	Single-stranded DNA-binding protein	Replication, recombination and repair [L]	42.58
COG2965	Primosomal replication protein N	Replication, recombination and repair [L]	42.58
COG0341	Preprotein translocase subunit SecF	Intracellular trafficking, secretion, and vesicular transport [U]	1.94
COG0342	Preprotein translocase subunit SecD	Intracellular trafficking, secretion, and vesicular transport [U]	1.94
COG1504	Uncharacterized conserved protein, DUF498 domain	Function unknown [S]	1.29
COG3737	Uncharacterized protein, contains Mth938-like domain	Function unknown [S]	1.29
COG0801	7,8-dihydro-6-hydroxymethylpterin pyrophosphokinase (folate biosynthesis)	Coenzyme transport and metabolism [H]	0.65
COG1862	Protein translocase subunit YajC	Intracellular trafficking, secretion, and vesicular transport [U]	0.65
COG2607	Predicted ATPase, AAA+ superfamily	General function prediction only [R]	0.65

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.45 %
Unclassified	root	N/A	33.55 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.45 %
Unclassified	root	N/A	33.55 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.45 %
Unclassified	root	N/A	33.55 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	65.16 %
Unclassified	root	N/A	33.55 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	52.26 %
Unclassified	root	N/A	33.55 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis	45.81 %
Unclassified	root	N/A	33.55 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.65 %

Name	Rank	Taxonomy	Distribution
SAR116 cluster	clade	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster	45.81 %
Unclassified	root	N/A	33.55 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.65 %

Name	Rank	Taxonomy	Distribution
Candidatus Puniceispirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum	45.81 %
Unclassified	root	N/A	33.55 %
Hydrogenophaga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.55 %
Candidatus Puniceispirillum marinum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum	30.32 %
Hydrogenophaga aromaticivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → Hydrogenophaga aromaticivorans	0.65 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000117\|DelMOWin2010_c10015791	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum	4090	Open in IMG/M
3300000117\|DelMOWin2010_c10020521	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum	3453	Open in IMG/M
3300000973\|BBAY93_10100282	Not Available	737	Open in IMG/M
3300001346\|JGI20151J14362_10023188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum	3208	Open in IMG/M
3300001349\|JGI20160J14292_10011454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum	5649	Open in IMG/M
3300001355\|JGI20158J14315_10013059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum	4556	Open in IMG/M
3300001963\|GOS2229_1065426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum	2450	Open in IMG/M
3300003409\|JGI26088J50261_1001359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum	13308	Open in IMG/M
3300003621\|JGI26083J51738_10065864	Not Available	825	Open in IMG/M
3300003621\|JGI26083J51738_10088424	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300004279\|Ga0066605_10240873	Not Available	680	Open in IMG/M
3300005239\|Ga0073579_1190951	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum	244022	Open in IMG/M
3300005239\|Ga0073579_1687659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum	3496	Open in IMG/M
3300005748\|Ga0076925_1011829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum	6362	Open in IMG/M
3300005837\|Ga0078893_10162613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum	4674	Open in IMG/M
3300006025\|Ga0075474_10210555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	594	Open in IMG/M
3300006026\|Ga0075478_10020621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum	2224	Open in IMG/M
3300006027\|Ga0075462_10014242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum	2565	Open in IMG/M
3300006399\|Ga0075495_1524621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum	825	Open in IMG/M
3300006867\|Ga0075476_10055562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum	1590	Open in IMG/M
3300006867\|Ga0075476_10258569	Not Available	619	Open in IMG/M
3300006874\|Ga0075475_10117491	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1188	Open in IMG/M
3300007557\|Ga0102821_1007008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum	3259	Open in IMG/M
3300007557\|Ga0102821_1062927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum	956	Open in IMG/M
3300007647\|Ga0102855_1065842	Not Available	977	Open in IMG/M
3300007725\|Ga0102951_1002276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum	6999	Open in IMG/M
3300008012\|Ga0075480_10085932	All Organisms → cellular organisms → Bacteria → Proteobacteria	1783	Open in IMG/M
3300008791\|Ga0103696_1026696	Not Available	627	Open in IMG/M
3300008995\|Ga0102888_1106203	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300009058\|Ga0102854_1040328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum	1345	Open in IMG/M
3300009077\|Ga0115552_1026360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum	2794	Open in IMG/M
3300009172\|Ga0114995_10425315	All Organisms → cellular organisms → Bacteria → Proteobacteria	728	Open in IMG/M
3300009434\|Ga0115562_1271569	All Organisms → cellular organisms → Bacteria → Proteobacteria	586	Open in IMG/M
3300009437\|Ga0115556_1112529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum	1030	Open in IMG/M
3300009438\|Ga0115559_1054225	Not Available	1709	Open in IMG/M
3300009440\|Ga0115561_1120916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum	1053	Open in IMG/M
3300009442\|Ga0115563_1010750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum	5540	Open in IMG/M
3300009443\|Ga0115557_1003939	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum	9512	Open in IMG/M
3300009443\|Ga0115557_1011459	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum	4920	Open in IMG/M
3300009445\|Ga0115553_1215851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum	760	Open in IMG/M
3300009449\|Ga0115558_1130252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum	1076	Open in IMG/M
3300009449\|Ga0115558_1258875	All Organisms → cellular organisms → Bacteria → Proteobacteria	701	Open in IMG/M
3300009467\|Ga0115565_10039017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum	2376	Open in IMG/M
3300009472\|Ga0115554_1010069	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum	5575	Open in IMG/M
3300009496\|Ga0115570_10109931	Not Available	1334	Open in IMG/M
3300009497\|Ga0115569_10235028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum	830	Open in IMG/M
3300009498\|Ga0115568_10240211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum	819	Open in IMG/M
3300009505\|Ga0115564_10156217	Not Available	1220	Open in IMG/M
3300009505\|Ga0115564_10435609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum	637	Open in IMG/M
3300009508\|Ga0115567_10674546	Not Available	620	Open in IMG/M
3300009508\|Ga0115567_10701085	All Organisms → cellular organisms → Bacteria → Proteobacteria	607	Open in IMG/M
3300010312\|Ga0102883_1188721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → Hydrogenophaga aromaticivorans	584	Open in IMG/M
3300012524\|Ga0129331_1198371	Not Available	660	Open in IMG/M
3300013010\|Ga0129327_10008006	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum	5875	Open in IMG/M
3300016724\|Ga0182048_1272293	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum	878	Open in IMG/M
3300016745\|Ga0182093_1261773	Not Available	642	Open in IMG/M
3300016747\|Ga0182078_10876422	Not Available	1047	Open in IMG/M
3300016749\|Ga0182053_1237729	Not Available	744	Open in IMG/M
3300016776\|Ga0182046_1101663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum	6512	Open in IMG/M
3300016797\|Ga0182090_1170412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum	5932	Open in IMG/M
3300017697\|Ga0180120_10014454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum	3735	Open in IMG/M
3300017818\|Ga0181565_10024801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum	4434	Open in IMG/M
3300017949\|Ga0181584_10240766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum	1176	Open in IMG/M
3300017950\|Ga0181607_10047754	Not Available	2930	Open in IMG/M
3300017950\|Ga0181607_10219619	Not Available	1106	Open in IMG/M
3300017951\|Ga0181577_10004759	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum	10448	Open in IMG/M
3300017952\|Ga0181583_10222218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1230	Open in IMG/M
3300017956\|Ga0181580_10512446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	783	Open in IMG/M
3300017957\|Ga0181571_10178440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum	1384	Open in IMG/M
3300017958\|Ga0181582_10040163	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum	3602	Open in IMG/M
3300017986\|Ga0181569_10009920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum	7097	Open in IMG/M
3300018041\|Ga0181601_10663100	Not Available	529	Open in IMG/M
3300018049\|Ga0181572_10018857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4612	Open in IMG/M
3300018420\|Ga0181563_10766277	Not Available	530	Open in IMG/M
3300018424\|Ga0181591_10538897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	845	Open in IMG/M
3300019756\|Ga0194023_1083173	All Organisms → cellular organisms → Bacteria → Proteobacteria	643	Open in IMG/M
3300019938\|Ga0194032_1022697	All Organisms → cellular organisms → Bacteria → Proteobacteria	662	Open in IMG/M
3300020051\|Ga0181555_1002611	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum	14788	Open in IMG/M
3300020052\|Ga0181554_1008082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum	7733	Open in IMG/M
3300020052\|Ga0181554_1040055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum	2645	Open in IMG/M
3300020053\|Ga0181595_10024223	Not Available	3864	Open in IMG/M
3300020166\|Ga0206128_1200497	Not Available	765	Open in IMG/M
3300020175\|Ga0206124_10002977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum	12286	Open in IMG/M
3300020191\|Ga0181604_10118622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum	1388	Open in IMG/M
3300020396\|Ga0211687_10135570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum	1022	Open in IMG/M
3300020469\|Ga0211577_10102584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum	1983	Open in IMG/M
3300020595\|Ga0206126_10067894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum	1853	Open in IMG/M
3300020810\|Ga0181598_1277549	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum	605	Open in IMG/M
3300021185\|Ga0206682_10221309	Not Available	853	Open in IMG/M
3300021185\|Ga0206682_10352852	All Organisms → cellular organisms → Bacteria → Proteobacteria	630	Open in IMG/M
3300021365\|Ga0206123_10068965	All Organisms → cellular organisms → Bacteria → Proteobacteria	1762	Open in IMG/M
3300021371\|Ga0213863_10146328	Not Available	1081	Open in IMG/M
3300021957\|Ga0222717_10122941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1604	Open in IMG/M
3300021959\|Ga0222716_10142140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum	1575	Open in IMG/M
(restricted) 3300022920\|Ga0233426_10180888	Not Available	875	Open in IMG/M
(restricted) 3300022920\|Ga0233426_10189080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum	851	Open in IMG/M
3300022921\|Ga0255765_1010100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum	7645	Open in IMG/M
3300022925\|Ga0255773_10024216	Not Available	4046	Open in IMG/M
3300022927\|Ga0255769_10040301	Not Available	2914	Open in IMG/M
3300022928\|Ga0255758_10008454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum	7851	Open in IMG/M
3300023108\|Ga0255784_10002462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum	14471	Open in IMG/M
3300023108\|Ga0255784_10009112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum	6897	Open in IMG/M
3300023110\|Ga0255743_10039158	Not Available	3052	Open in IMG/M
3300023119\|Ga0255762_10001195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum	22646	Open in IMG/M
3300023119\|Ga0255762_10022383	Not Available	4209	Open in IMG/M
3300023698\|Ga0228682_1030871	All Organisms → cellular organisms → Bacteria → Proteobacteria	719	Open in IMG/M
3300023706\|Ga0232123_1054587	Not Available	795	Open in IMG/M
3300024230\|Ga0228638_1143523	All Organisms → cellular organisms → Bacteria → Proteobacteria	554	Open in IMG/M
(restricted) 3300024255\|Ga0233438_10018222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum	4410	Open in IMG/M
(restricted) 3300024264\|Ga0233444_10026516	Not Available	3927	Open in IMG/M
3300024301\|Ga0233451_10036544	Not Available	3003	Open in IMG/M
3300024320\|Ga0233398_1086252	Not Available	755	Open in IMG/M
3300024335\|Ga0228672_1072057	Not Available	1027	Open in IMG/M
3300025610\|Ga0208149_1069337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	882	Open in IMG/M
3300025630\|Ga0208004_1060920	Not Available	985	Open in IMG/M
3300025637\|Ga0209197_1051790	All Organisms → cellular organisms → Bacteria → Proteobacteria	1398	Open in IMG/M
3300025641\|Ga0209833_1093757	Not Available	883	Open in IMG/M
3300025641\|Ga0209833_1146947	Not Available	623	Open in IMG/M
3300025653\|Ga0208428_1098096	Not Available	828	Open in IMG/M
3300025653\|Ga0208428_1167396	Not Available	579	Open in IMG/M
3300025654\|Ga0209196_1104440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum	836	Open in IMG/M
3300025680\|Ga0209306_1127481	All Organisms → cellular organisms → Bacteria → Proteobacteria	737	Open in IMG/M
3300025690\|Ga0209505_1025456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum	2164	Open in IMG/M
3300025694\|Ga0209406_1093830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum	1027	Open in IMG/M
3300025705\|Ga0209374_1010522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum	5101	Open in IMG/M
3300025712\|Ga0209305_1028942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum	2078	Open in IMG/M
3300025712\|Ga0209305_1226324	Not Available	539	Open in IMG/M
3300025751\|Ga0208150_1086728	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1032	Open in IMG/M
3300025771\|Ga0208427_1175605	Not Available	694	Open in IMG/M
3300025809\|Ga0209199_1223118	All Organisms → cellular organisms → Bacteria → Proteobacteria	637	Open in IMG/M
3300025810\|Ga0208543_1093931	Not Available	718	Open in IMG/M
3300025815\|Ga0208785_1089412	All Organisms → cellular organisms → Bacteria → Proteobacteria	777	Open in IMG/M
3300025828\|Ga0208547_1077702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum	1068	Open in IMG/M
3300025849\|Ga0209603_1021855	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum	4003	Open in IMG/M
3300025870\|Ga0209666_1104979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum	1365	Open in IMG/M
3300025894\|Ga0209335_10351267	Not Available	611	Open in IMG/M
3300025897\|Ga0209425_10234773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum	955	Open in IMG/M
3300026461\|Ga0247600_1084528	Not Available	625	Open in IMG/M
3300026500\|Ga0247592_1115484	Not Available	644	Open in IMG/M
3300026504\|Ga0247587_1166289	All Organisms → cellular organisms → Bacteria → Proteobacteria	541	Open in IMG/M
3300026504\|Ga0247587_1168902	Not Available	536	Open in IMG/M
3300027416\|Ga0207994_1071895	Not Available	698	Open in IMG/M
3300028008\|Ga0228674_1214613	Not Available	613	Open in IMG/M
3300028110\|Ga0247584_1138510	All Organisms → cellular organisms → Bacteria → Proteobacteria	602	Open in IMG/M
3300028111\|Ga0233397_1096652	All Organisms → cellular organisms → Bacteria → Proteobacteria	747	Open in IMG/M
3300028133\|Ga0228609_1153474	Not Available	564	Open in IMG/M
3300028134\|Ga0256411_1170046	Not Available	704	Open in IMG/M
3300028134\|Ga0256411_1205685	Not Available	621	Open in IMG/M
3300028196\|Ga0257114_1025683	Not Available	2824	Open in IMG/M
3300028196\|Ga0257114_1107993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum	1122	Open in IMG/M
3300028287\|Ga0257126_1161112	Not Available	734	Open in IMG/M
3300031621\|Ga0302114_10315340	Not Available	609	Open in IMG/M
3300032073\|Ga0315315_10133730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum	2312	Open in IMG/M
3300032073\|Ga0315315_10567696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1048	Open in IMG/M
3300032088\|Ga0315321_10602478	All Organisms → cellular organisms → Bacteria → Proteobacteria	651	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.35%
Host-Associated	Host-Associated	0.65%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.35%
Algae	Host-Associated → Algae	0.65%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	97.42%
Freshwater	Environmental → Aquatic → Freshwater	1.29%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	0.65%
Green Algae	Host-Associated → Algae → Green Algae	0.65%

Habitat	Taxonomy	Distribution
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	34.19%
Coastal	Environmental → Aquatic → Marine → Coastal	23.23%
Pelagic	Environmental → Aquatic → Marine → Pelagic	22.58%
Unclassified	Environmental → Aquatic → Marine → Unclassified	5.16%
Inlet	Environmental → Aquatic → Marine → Inlet	4.52%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	4.52%
Oceanic	Environmental → Aquatic → Marine → Oceanic	3.23%
River	Environmental → Aquatic → Freshwater → River	1.29%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	0.65%
Ectosymbionts	Host-Associated → Algae → Green Algae → Ectosymbionts	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	23.23%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	23.87%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	22.58%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	6.45%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	5.16%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	4.52%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	4.52%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	3.23%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	3.87%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	1.29%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	0.65%
Unclassified	Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	23.87%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	20.00%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	11.61%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	9.68%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	3.23%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	3.23%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	3.23%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	3.87%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	2.58%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	2.58%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	2.58%
Marine	Environmental → Aquatic → Marine → Inlet → Unclassified → Marine	1.94%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	1.29%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	1.29%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	1.29%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	1.29%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	1.29%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	1.29%
Marine Surface Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water	0.65%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	0.65%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	0.65%
Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Water	0.65%
Macroalgal Surface	Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface	0.65%
Ocean Water	Environmental → Aquatic → Marine → Oceanic → Unclassified → Ocean Water	0.65%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000117	Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010	Environmental	Open in IMG/M
3300000973	Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY93	Host-Associated	Open in IMG/M
3300001346	Pelagic Microbial community sample from North Sea - COGITO 998_met_01	Environmental	Open in IMG/M
3300001349	Pelagic Microbial community sample from North Sea - COGITO 998_met_10	Environmental	Open in IMG/M
3300001355	Pelagic Microbial community sample from North Sea - COGITO 998_met_08	Environmental	Open in IMG/M
3300001963	Marine microbial communities from Nags Head, North Carolina, USA - GS013	Environmental	Open in IMG/M
3300003409	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_161SG_22_DNA	Environmental	Open in IMG/M
3300003621	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_85LU_5_DNA	Environmental	Open in IMG/M
3300004279	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_10m	Environmental	Open in IMG/M
3300005239	Environmental Genome Shotgun Sequencing: Ocean Microbial Populations from the Gulf of Maine	Environmental	Open in IMG/M
3300005748	Seawater microbial communities from Vineyard Sound, MA, USA - control T7	Environmental	Open in IMG/M
3300005837	Exploring phylogenetic diversity in Port Hacking ocean in Sydney, Australia - Port Hacking PH4 TJ4-TJ18	Environmental	Open in IMG/M
3300006025	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNA	Environmental	Open in IMG/M
3300006026	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA	Environmental	Open in IMG/M
3300006027	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA	Environmental	Open in IMG/M
3300006399	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006867	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNA	Environmental	Open in IMG/M
3300006874	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNA	Environmental	Open in IMG/M
3300007557	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.715	Environmental	Open in IMG/M
3300007647	Estuarine microbial communities from the Columbia River estuary - metaG 1370B-02	Environmental	Open in IMG/M
3300007725	Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_B_H2O_MG	Environmental	Open in IMG/M
3300008012	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNA	Environmental	Open in IMG/M
3300008791	Microbial communities from seawater in eastern North Pacific Ocean - P1 free-living McLane	Environmental	Open in IMG/M
3300008995	Estuarine microbial communities from the Columbia River estuary - metaG 1551A-3	Environmental	Open in IMG/M
3300009058	Estuarine microbial communities from the Columbia River estuary - metaG 1370A-02	Environmental	Open in IMG/M
3300009077	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328	Environmental	Open in IMG/M
3300009172	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154	Environmental	Open in IMG/M
3300009434	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110516	Environmental	Open in IMG/M
3300009437	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110414	Environmental	Open in IMG/M
3300009438	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110506	Environmental	Open in IMG/M
3300009440	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110512	Environmental	Open in IMG/M
3300009442	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110519	Environmental	Open in IMG/M
3300009443	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110421	Environmental	Open in IMG/M
3300009445	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110331	Environmental	Open in IMG/M
3300009449	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110426	Environmental	Open in IMG/M
3300009467	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110530	Environmental	Open in IMG/M
3300009472	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110404	Environmental	Open in IMG/M
3300009496	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524	Environmental	Open in IMG/M
3300009497	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120503	Environmental	Open in IMG/M
3300009498	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120426	Environmental	Open in IMG/M
3300009505	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523	Environmental	Open in IMG/M
3300009508	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412	Environmental	Open in IMG/M
3300010312	Estuarine microbial communities from the Columbia River estuary - metaG 1549B-02	Environmental	Open in IMG/M
3300012524	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013010	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.8_DNA	Environmental	Open in IMG/M
3300016724	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011507AT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016745	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041411BS metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016747	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071409BT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016749	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011512AT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016776	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011505AT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016797	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041408BS metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017697	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)	Environmental	Open in IMG/M
3300017818	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017949	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017950	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)	Environmental	Open in IMG/M
3300017951	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017952	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017956	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017957	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017958	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017986	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018041	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaG (megahit assembly)	Environmental	Open in IMG/M
3300018049	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018420	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018424	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019756	Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW6Sep16_MG	Environmental	Open in IMG/M
3300019938	Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW8Nov16_MG	Environmental	Open in IMG/M
3300020051	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011504AT metaG (spades assembly)	Environmental	Open in IMG/M
3300020052	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011503CT metaG (spades assembly)	Environmental	Open in IMG/M
3300020053	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041401AS metaG (spades assembly)	Environmental	Open in IMG/M
3300020166	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160426_1	Environmental	Open in IMG/M
3300020175	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160321_2	Environmental	Open in IMG/M
3300020191	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041410US metaG (spades assembly)	Environmental	Open in IMG/M
3300020396	Marine microbial communities from Tara Oceans - TARA_B100000767 (ERX555915-ERR599122)	Environmental	Open in IMG/M
3300020469	Marine microbial communities from Tara Oceans - TARA_B100001093 (ERX555967-ERR599052)	Environmental	Open in IMG/M
3300020595	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160412_1	Environmental	Open in IMG/M
3300020810	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041404US metaG (spades assembly)	Environmental	Open in IMG/M
3300021185	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 40m 12015	Environmental	Open in IMG/M
3300021365	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160316_1	Environmental	Open in IMG/M
3300021371	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO497	Environmental	Open in IMG/M
3300021957	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18D	Environmental	Open in IMG/M
3300021959	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13D	Environmental	Open in IMG/M
3300022920 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_118_April2016_10_MG	Environmental	Open in IMG/M
3300022921	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaG	Environmental	Open in IMG/M
3300022925	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG	Environmental	Open in IMG/M
3300022927	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG	Environmental	Open in IMG/M
3300022928	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011513CT metaG	Environmental	Open in IMG/M
3300023108	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101403AT metaG	Environmental	Open in IMG/M
3300023110	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG	Environmental	Open in IMG/M
3300023119	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG	Environmental	Open in IMG/M
3300023698	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 27R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023706	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011504AT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024230	Seawater microbial communities from Monterey Bay, California, United States - 48D	Environmental	Open in IMG/M
3300024255 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_10_MG	Environmental	Open in IMG/M
3300024264 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_124_October2016_10_MG	Environmental	Open in IMG/M
3300024301	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011504CT (spades assembly)	Environmental	Open in IMG/M
3300024320	Seawater microbial communities from Monterey Bay, California, United States - 38D	Environmental	Open in IMG/M
3300024335	Seawater microbial communities from Monterey Bay, California, United States - 90D	Environmental	Open in IMG/M
3300025610	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025630	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025637	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110512 (SPAdes)	Environmental	Open in IMG/M
3300025641	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110506 (SPAdes)	Environmental	Open in IMG/M
3300025653	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025654	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110509 (SPAdes)	Environmental	Open in IMG/M
3300025680	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328 (SPAdes)	Environmental	Open in IMG/M
3300025690	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110331 (SPAdes)	Environmental	Open in IMG/M
3300025694	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120426 (SPAdes)	Environmental	Open in IMG/M
3300025705	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_10m (SPAdes)	Environmental	Open in IMG/M
3300025712	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321 (SPAdes)	Environmental	Open in IMG/M
3300025751	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025771	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025809	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523 (SPAdes)	Environmental	Open in IMG/M
3300025810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025815	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025828	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025849	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607 (SPAdes)	Environmental	Open in IMG/M
3300025870	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_125m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025894	Pelagic Microbial community sample from North Sea - COGITO 998_met_09 (SPAdes)	Environmental	Open in IMG/M
3300025897	Pelagic Microbial community sample from North Sea - COGITO 998_met_05 (SPAdes)	Environmental	Open in IMG/M
3300026461	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 75R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026500	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 54R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026504	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 46R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300027416	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.757 (SPAdes)	Environmental	Open in IMG/M
3300028008	Seawater microbial communities from Monterey Bay, California, United States - 1D_r	Environmental	Open in IMG/M
3300028110	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 43R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300028111	Seawater microbial communities from Monterey Bay, California, United States - 35D	Environmental	Open in IMG/M
3300028133	Seawater microbial communities from Monterey Bay, California, United States - 10D	Environmental	Open in IMG/M
3300028134	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - WCR_12 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300028196	Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI112_10m	Environmental	Open in IMG/M
3300028287	Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI060_120m	Environmental	Open in IMG/M
3300031621	Marine microbial communities from Western Arctic Ocean, Canada - AG5_Surface	Environmental	Open in IMG/M
3300032073	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 3416	Environmental	Open in IMG/M
3300032088	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 21515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOWin2010_100157912	3300000117	Marine	MSQVTHNIYTIYASYDTKYCSFGRFFGKKNGILPCKRDTELNMVFKILI*
DelMOWin2010_100205213	3300000117	Marine	MSQVIHNIYTIYASYDTKYCSFGRFFGKKNGILPCKQDAEL
BBAY93_101002822	3300000973	Macroalgal Surface	MSQVTHNIYTIYASYDTKYCSFGRFFGKKNGILPCKQDAELNMFIKILI*
JGI20151J14362_100231882	3300001346	Pelagic Marine	MSQVTHNIYTICASYDTKYCSFGRFFGKKNGILPCKQDAELNMVIKILI*
JGI20160J14292_100114541	3300001349	Pelagic Marine	MSQVTHNIYTINASYDTKYCSFGRFFGKKNGILPXXQDXELXMVXKILI*
JGI20158J14315_100130592	3300001355	Pelagic Marine	MSQVTHNIYTIXASYDTKYCSFGRFFGKKNGILPCKQDAELNMVIKILI*
GOS2229_10654262	3300001963	Marine	MSQVTHNIYTINASYDTKYCSFGRFFGKKNGILPCNQDAELNMVIKILI*
JGI26088J50261_10013598	3300003409	Marine	MSQVTHNIYTIYASYDTKYCSFGRFFGKKNGILPCKQDAELNMVIKILI*
JGI26083J51738_100658642	3300003621	Marine	NIYTIYASYDTKYCSFGRFFDKKIGILPSKQDTDLKMLFKLLI*
JGI26083J51738_100884242	3300003621	Marine	MSQVTHNIYTIYASYDTKYCSFGRFFGKKNGILPCKQDAELNMVIKILI
Ga0066605_102408732	3300004279	Marine	IPVSLGDNAKAMSQVTHNIYTINASYDTKYCSFDRFFGKKNGILPCKRDAELNAVIKILI
Ga0073579_1190951225	3300005239	Marine	LLSDNSKITSQVTHNIYTIHASYDTKYCSFGRFFGKKNGILPQEQDTDLNMVFKILI*
Ga0073579_16876592	3300005239	Marine	LLSDNSKITSQVTHNIYTIHASYDTKYCSFGRFFGKKIGILPQEQDTDLNMVFKILI*
Ga0076925_10118292	3300005748	Marine	MSQVTHNIYTINASYDTKYCSFGRFFGKKNGILPCKQDAKLNMVIKILI*
Ga0078893_101626135	3300005837	Marine Surface Water	MSQVTHNIYTINASYDTKYCSFGRFFGKKNGILPCKQDAELNMVFKILI*
Ga0075474_102105552	3300006025	Aqueous	MSQVIHNIYTICASYDTKYCSFGRFFGKKNGILPCKQDAKLNIVIKILI*
Ga0075478_100206212	3300006026	Aqueous	MSQVIHNIYTICASYDTKYCSFGRFFGKKNGILPCKQDAKLNMVIKILI*
Ga0075462_100142421	3300006027	Aqueous	ASYDTKYCSFGRFFGKKNGILPCKQDAELNMVIKILI*
Ga0075495_15246212	3300006399	Aqueous	MIYASYDTKYCSFGRFFDKKIGILPSRQDTDLNMLFKLLI*
Ga0075476_100555622	3300006867	Aqueous	MSQVTHNIYTINASYDTKYCSFGRFFGKKNGILPCKQDAELNMVIKILI*
Ga0075476_102585692	3300006867	Aqueous	ASYDTKYCSFGRFFGKKNGILPCKRDTELNMVFKILI*
Ga0075475_101174912	3300006874	Aqueous	MSQVTHNIYTIYASYDTKYCSFGRFFGKKNGILPCKRDTELNMVFKY*
Ga0102821_10070083	3300007557	Estuarine	ASYDTKYCSFGRFFDKKIGILPSKQDTDLKMLFKLLI*
Ga0102821_10629272	3300007557	Estuarine	MSQVTHNIYTINASYDTKYCSFGRFFGKKNGILPCKQDTELNMVIKILI*
Ga0102855_10658422	3300007647	Estuarine	MSLVTHNIYTIHAHYDTKYCSFDRFFGKKIGHFSQEQGTDLNMVFKELI*
Ga0102951_10022763	3300007725	Water	MSQVTHNIYTIYASYDTKYCSFGRFFGKKNGNLPCKQDAELNMVIKILI*
Ga0075480_100859321	3300008012	Aqueous	MSQVTHNIYTINASYDTKYCSFGRFFGKKNGSLPCKQDA
Ga0103696_10266961	3300008791	Ocean Water	DAHYDTKYCSFDRFFGKKIGFLPQEQDTDLNMVFKILI*
Ga0102888_11062032	3300008995	Estuarine	MSQVTHNIYTIYASYDTKYCSFGCFFGRKNGILPWEQDIELNMGFRILI*
Ga0102854_10403282	3300009058	Estuarine	LLSDNSKITSLFTHNIYTIHAHYDTKYCSFDRFFGKKIGFLPQEQDTDLNMVSKLLI*
Ga0115552_10263602	3300009077	Pelagic Marine	MSQVTHNIYTINASYDTKYCSFGHFFGKKNGILPCKQDTELNTVIKILI*
Ga0114995_104253151	3300009172	Marine	MSQVIHNIYTIYASYDTKYCSFDRFFGKKNSILPCKQDTELNMGFKIL
Ga0115562_12715691	3300009434	Pelagic Marine	MSQITHNIYTIYASYDTKYCSFGRFFDKKIGLLPSKQDTDLKMLFKLLI*
Ga0115556_11125292	3300009437	Pelagic Marine	MSQVTHNIYTINASYDTKYCSFGRFFGKKNGILPRKQDTELDMVFKILI*
Ga0115559_10542253	3300009438	Pelagic Marine	MSQVTHNIYTINASYDTKYCSFGRFFGKKNGSLPCKQDAELNMVIKILI*
Ga0115561_11209162	3300009440	Pelagic Marine	MSQVTHNIYTIYASYDTNYCSFGRFFGKKIGILACKRDTELNMVFKILI*
Ga0115563_10107504	3300009442	Pelagic Marine	MSQVTHNIYTIYASYDTKYCSFGRFFGKKNGILPCRQYAELNMVIKTLI*
Ga0115557_10039391	3300009443	Pelagic Marine	AKTMSQVTHNIYTIYASYDTKYCSFGRFFGKKNGILPCKRDTELNMVFKILI*
Ga0115557_10114592	3300009443	Pelagic Marine	MSQVIHNIYTICASYDTKYCSFGRFFGKKNGILPCKQDAELNMVIKILI*
Ga0115553_12158512	3300009445	Pelagic Marine	MSQFTHNIYTINASYDTKYCSFGRFFGKKNGILPCKQDAELNMFIKILI*
Ga0115558_11302523	3300009449	Pelagic Marine	LSDNSKTSPQVTHNIYTIYASYDTKYCSFGRFFDKKIGILPSKQDTDLNMLFKLLI*
Ga0115558_12588752	3300009449	Pelagic Marine	MSQVTHNIYTINASYDTKYCSFGRFFGKKNGILPCKQDAELNM
Ga0115565_100390172	3300009467	Pelagic Marine	MSQVTHNIYTICVSYDTKYCSFGRFFGKKNGILPRKQDTELDMVFKILI*
Ga0115554_10100691	3300009472	Pelagic Marine	ASYDTKYCSFGRFFGKKNGILPCKQDAELNMFIKILI*
Ga0115570_101099312	3300009496	Pelagic Marine	MSQVTHNIYTINASYDTKYCSFGHFFGKKNGILPCKQDAELNMVIKILI*
Ga0115569_102350282	3300009497	Pelagic Marine	MSQVTHNIYTICVSYDTKYCSFGRFFGKKNGILPCKQDAELNMVIKILI*
Ga0115568_102402112	3300009498	Pelagic Marine	MSLVTHNIYTIHAHYDTKYCSFDRFFGKKIGFLHREQDTSLNMVLKRLI*
Ga0115564_101562172	3300009505	Pelagic Marine	MSLVTHNIYTIHAHYDTKYCSFDRFFGKKIGFLPQEQYTDLNMVLKRLI*
Ga0115564_104356092	3300009505	Pelagic Marine	MSQIMHNIYTIYASYDTKYCSFGRFFGKKNGILPCKQDAKLNMVIKILI*
Ga0115567_106745462	3300009508	Pelagic Marine	AIPVSLGDNAKAMSQVTHNIYTINASYDTKYCSFGRFFGKKNGILPCKQDAELNMVIKILI*
Ga0115567_107010852	3300009508	Pelagic Marine	MSQVTHNIYTICASYDTKYCSFGRFFGKKNGILPCNQDAELNMVIKILI*
Ga0102883_11887211	3300010312	Estuarine	IYASYDTKYCSFGRFFGKKNGILPCKQDTELNMVFKMLI*
Ga0129331_11983712	3300012524	Aqueous	AIPASLGDNAKAMSQVIHNIYTICASYDTKYCSFGRFFGKKNGILPCKQDAELNMVIKILI*
Ga0129327_100080062	3300013010	Freshwater To Marine Saline Gradient	MSQVTHNIYTINASYDTKYCSFGRFFGKKNGILPCKQDAELNMFIKILI*
Ga0182048_12722932	3300016724	Salt Marsh	MSQVIHNIYTIYASYDTKYCSFGRFFGKKNGILPCKQDAKLNMVIKTLI
Ga0182093_12617731	3300016745	Salt Marsh	SLGDNAKAMSQVTHNIYTIYASYDTKYCSFGRFFGKKIGILPSRQDTDLKMLFKLLI
Ga0182078_108764222	3300016747	Salt Marsh	MSQVIHNIYTIYASYDTKYCSFGRFFGKKNGILPCKQDAELNMVIKKLI
Ga0182053_12377293	3300016749	Salt Marsh	YDTKYCSFGRFFGKKNGILPCKQDAELNMVIKTLI
Ga0182046_11016633	3300016776	Salt Marsh	MSQVTHNIYTIYASYDTKYCSFGRFFGKKNGILPCKQDTKLNMVIKILI
Ga0182090_11704121	3300016797	Salt Marsh	TIYASYDTKYCSFGRFFGKKNGILPCKQDAKLNMVIKILI
Ga0180120_100144543	3300017697	Freshwater To Marine Saline Gradient	MSQVTHNIYTINASYDTKYCSFGRFFDKKIGILPSRQDTDLNMLFKLLI
Ga0181565_100248011	3300017818	Salt Marsh	GDNAKAMSQVTHNIYTIYASYDTKYCSFGRFFGKKNGILPCKQDAELNMFIKTLI
Ga0181584_102407663	3300017949	Salt Marsh	MSQVTHNIYTIYASYDTKYCSFGRFFGKKNGILPCKQDNELNMVIKILI
Ga0181607_100477542	3300017950	Salt Marsh	MSQVTHNIYTIYASYDTKYCSFGRFFGKKNGILPCKQDAELKMVIKTLI
Ga0181607_102196192	3300017950	Salt Marsh	MIYASYDTKYCSFGRFFDKKIGILPSKQDTDLNMLFKLLI
Ga0181577_100047594	3300017951	Salt Marsh	MSQVTHNIYTIYASYDTKYCSFGRFFGKKNGILPCKQDAELNMFIKTLI
Ga0181583_102222182	3300017952	Salt Marsh	MSQVTHNIYTIYASYDTKYCSFGRFFGKKNGILPCKQDAELNMVIKILT
Ga0181580_105124462	3300017956	Salt Marsh	MSQVTHNIYTIYASYDTKYCSFDRFFGKKNGILPCKQDAELNMVIKTLI
Ga0181571_101784402	3300017957	Salt Marsh	MSQVTHNIYTIYASYDTKYCSFGRFFGKKNGILPCKQDAELNMVIKTLI
Ga0181582_100401633	3300017958	Salt Marsh	MSQVTHNIYTIYASYDTKYCSFGRFFGKKNGILPCKQDAKLNMVIKILT
Ga0181569_100099204	3300017986	Salt Marsh	MSQVTHNIYTIYASYDTKYCSFGRFFGKKNGILPCKQDTELNMVIKTLI
Ga0181601_106631001	3300018041	Salt Marsh	MSQVTHNIYTIYASYDTKYCSFGRFFGKKNGILPCKQDTELNMVIKILI
Ga0181572_100188575	3300018049	Salt Marsh	MSQVIHNIYTIYASYDTKYCSFGRFFGKKNGILPCKQDAELNMVIKTLI
Ga0181563_107662772	3300018420	Salt Marsh	MSQVTHNIYTIYASYDTKYCSFGRFFGKKNGILPFKQDTKLNMVIKTLI
Ga0181591_105388972	3300018424	Salt Marsh	MSQVTHNIYTIYASYDTKYCSFGRFFGKKNGILPCKQDAELNMVIKKLI
Ga0194023_10831732	3300019756	Freshwater	MSQVTHNIYTIYASYDTKYCSFGRFFGKKNGILSCKQDAELNMFIKILI
Ga0194032_10226971	3300019938	Freshwater	MSQVTHNIYTINASYDTKYCSFGRFFGKKNGSLPC
Ga0181555_100261112	3300020051	Salt Marsh	MSQVIHNIYTIYASYDTKYCSFGRFFGKKNGILPCKQDAKLNMVIKILI
Ga0181554_10080828	3300020052	Salt Marsh	MSQVIHNIYTIYASYDTKYCSFGRFFGKKNGILPCKQDAELNMVIKILT
Ga0181554_10400552	3300020052	Salt Marsh	MSQVTHNIYTIYASYDTKYCSFGRFFGKKNGILPCKQDAKLNMVIKTLI
Ga0181595_100242233	3300020053	Salt Marsh	MSQVIHNIYTIYASYDTKYCSFGRFFGKKNGILPCKQDAELNMVIKILV
Ga0206128_12004972	3300020166	Seawater	KKAMSQVTHNIYTINASYDTKYCSFGRFFGKKNGILPCKQDAELNMVIKILI
Ga0206124_100029772	3300020175	Seawater	MSQVTHNIYTIYASYDTKYCSFGRFFGKKNGILPCKRDTELNMVFKILI
Ga0181604_101186223	3300020191	Salt Marsh	KTTSQVTHNIYTIHASYDTKYCSFGRFFGKKNGILPLKQDTDLNMAFKILI
Ga0211687_101355702	3300020396	Marine	LLSDNLKTTSQGTHNIYTIYASYDTKYCSFGRFFGKKNGILPQNQDTDLKMVFKELI
Ga0211577_101025842	3300020469	Marine	LLSDNSKTTLQVNHNIYTIYASYDTKYCIFDHFSGKKNGALPQEQETDFNMVVKILI
Ga0206126_100678942	3300020595	Seawater	MSQVTHNIYTICVSYDTKYCSFGRFFGKKNGILPRKQDTELDMVFKILI
Ga0181598_12775492	3300020810	Salt Marsh	MSQVTHNIYTINASYDTKYCSFGRFFGKKNGILPCKQDAKLNMVIKILI
Ga0206682_102213092	3300021185	Seawater	MSQIIHNIYTIYAGYDTKYCNFGRFFGKKNGILACRQDTELNMVFKLLI
Ga0206682_103528521	3300021185	Seawater	MPPVTHNIYTIYASYDTKYCSFDRFFGKKNGILPC
Ga0206123_100689652	3300021365	Seawater	MSQVTHNIYTINASYDTKYCSFGRFFGKKNGILPCKQDAELNMVIKILI
Ga0213863_101463282	3300021371	Seawater	MSQVIHNIYTIYASYDTKYCSFGRFFGKKNGTLPCKQDTELNMVFKILI
Ga0222717_101229412	3300021957	Estuarine Water	LLGDNSKTTSQVTHNIYTIHASYDTKYCSFDRFFGKKNGILSSEHDTDLNMVFKILI
Ga0222716_101421402	3300021959	Estuarine Water	MSQVTHNIYTINASYDTKYCSFGRFFGKKNGILPCKQDAELNMFIKILI
(restricted) Ga0233426_101808883	3300022920	Seawater	HNIYTINASYDTKYCSFDRFFGKKNGILPCKRDAELNAVIKILI
(restricted) Ga0233426_101890802	3300022920	Seawater	MSQVTHNIYTIYAGYDTKYCSFGRFFGKKNGILPYKQDTELNMEFKVLI
Ga0255765_10101008	3300022921	Salt Marsh	YTIYASYDTKYCSFGRFFGKKNGILPCKQDAELNMVIKILI
Ga0255773_100242161	3300022925	Salt Marsh	MSQVTHNIYTIYASYDTKYCSFGRFFGKKNGILPC
Ga0255769_100403012	3300022927	Salt Marsh	MSQVTHNIYTIYASYDTKYCSFGRFFGKKNGILPCKQDAELKMV
Ga0255758_100084548	3300022928	Salt Marsh	HNIYTIYASYDTKYCSFGRFFGKKNGILPCKQDAELNMVIKILI
Ga0255784_1000246215	3300023108	Salt Marsh	LGDNAKAMSQVTHNIYTIYASYDTKYCSFGRFFGKKNGILPCKQDAELNMVIKTLI
Ga0255784_100091121	3300023108	Salt Marsh	MSQVTHNIYTIYASYDTKYCSFGRFFGKKNGILPCKQDA
Ga0255743_100391582	3300023110	Salt Marsh	MSQVTHNIYTIYASYDTKYCSFGRFFGKKNGILPCKQDTELNMVIKPLI
Ga0255762_100011951	3300023119	Salt Marsh	NAKAMSQVTHNIYTIYASYDTKYCSFGRFFGKKNGILPCKQDTELNMVIKTLI
Ga0255762_100223835	3300023119	Salt Marsh	MSQVTHNIYTIYASYDTKYCSFGRFFGKKNGILPCKQDTEL
Ga0228682_10308712	3300023698	Seawater	LLGDNSKKTPLFTHNIYTIRAHYDTKYCSFDRFFGKKIGLLPQEQDTDLNMVFKILI
Ga0232123_10545871	3300023706	Salt Marsh	ASYDTKYCSFGRFFGKKNGILPCKQDAELNMVIKTLI
Ga0228638_11435232	3300024230	Seawater	MSQIIHNIYTIYAGYDTKYCNFGRFFGKKNGILACRQDTELNMVFKLL
(restricted) Ga0233438_100182224	3300024255	Seawater	AIPASLSDNSKTSPQVTHNIYTIYASYDTKYCSFGRFFDKKIGILPSKQDTDLNMLFKLL
(restricted) Ga0233444_100265161	3300024264	Seawater	MSQVTHNIYTINASYDTKYCSFDRFFGKKNGILPCKRDAELNTVI
Ga0233451_100365441	3300024301	Salt Marsh	MSQVTHNIYTIYASYDTKYCSFGRFFGKKNGILPCKQDAELNM
Ga0233398_10862522	3300024320	Seawater	TGKCAIPVSLGDNSKTTSQITHNIYTIYASYDTKYCSFGRVFGKKNGILPCNQDTELKLYFKILI
Ga0228672_10720573	3300024335	Seawater	KTSPQVTHNIYTIYASYDTKYCSFGRFFDKKIGILPSKQDTDLRMLFKLLI
Ga0208149_10693372	3300025610	Aqueous	MSQVIHNIYTICASYDTKYCSFGRFFGKKNGILPCKQDAKLNMVIKILI
Ga0208004_10609201	3300025630	Aqueous	MSQVTHNIYTIYASYDTKYCSFGRFFGKKNGILPCK
Ga0209197_10517903	3300025637	Pelagic Marine	MSQVTHNIYTIYASYDTKYCSFGRFFGKKNGILPCKQDAELNMFIKILI
Ga0209833_10937572	3300025641	Pelagic Marine	MSQVTHNIYTIYASYDTKYCSFGRFFGKKNGILPRKQDTELDMVFKILI
Ga0209833_11469471	3300025641	Pelagic Marine	TICVSYDTKYCSFGRFFGKKNGILPRKQDTELDMVFKILI
Ga0208428_10980961	3300025653	Aqueous	LSDNAKTMSQVTHNIYTIYASYDTKYCSFGRFFGKKNGILPCKRDTELNMVFKILI
Ga0208428_11673961	3300025653	Aqueous	ASYDTKYCSFGRFFGKKNGILPCKQDAELNMVIKILI
Ga0209196_11044402	3300025654	Pelagic Marine	MSQVTHNIYTINASYDTKYCSFGRFFDKKIGILPSKQDTDLKMLFKLLI
Ga0209306_11274811	3300025680	Pelagic Marine	MSQVTHNIYTINASYDTKYCSFGRFFGKKNGILPCKQDAELNMF
Ga0209505_10254563	3300025690	Pelagic Marine	AIPVSLGDNAKAMSQVTHNIYTINASYDTKYCSFGRFFGKKNGILPCKQDAELNMVIKIL
Ga0209406_10938302	3300025694	Pelagic Marine	MSQVIHNIYTICASYDTKYCSFGRFFGKKNGILPCKQDAELNMVIKILI
Ga0209374_10105224	3300025705	Marine	MSQVTHNIYTINASYDTKYCSFDRFFGKKNGILPCKRDAELNAVIKILI
Ga0209305_10289423	3300025712	Pelagic Marine	IPASLGDNAKAMSQVTHNIYTICVSYDTKYCSFGRFFGKKNGILPRKQDTELDMVFKILI
Ga0209305_12263241	3300025712	Pelagic Marine	AIPASLSDNAKTMSQVTHNIYTIYASYDTKYCSFGRFFGKKNGILPCKRDTELNMVFKIL
Ga0208150_10867282	3300025751	Aqueous	MSQVTHNIYTINASYDTKYCSFGRFFGKKNGSLPCKQDAELNMVIKILI
Ga0208427_11756052	3300025771	Aqueous	IPASLSDNAKTMSQVTHNIYTIYASYDTKYCSFGRFFGKKNGILPCKQDAELNMVIKILI
Ga0209199_12231182	3300025809	Pelagic Marine	MSLVTHNIYTIHAHYDTKYCSFDRFFGKKIGFLHREQDASLN
Ga0208543_10939312	3300025810	Aqueous	MSQVTHNIYTINASYDTKYCSFGRFFGKKNGILPCKQDAELNMVIKKLI
Ga0208785_10894121	3300025815	Aqueous	MSQVTHNIYTIYASYDTKYCSFGRFFGKKNGILPCKQ
Ga0208547_10777021	3300025828	Aqueous	LSDNAKTMSQVTHNIYTIYASYDTKYCSFGRFFGKKNGILPCKQDAELNMVIKILI
Ga0209603_10218551	3300025849	Pelagic Marine	YASYDTKYCSFGRFFDKKIGILPSKQDTDLKMLFKLLI
Ga0209666_11049793	3300025870	Marine	MSQVTHNIYTINASYDTKYCSFDRFFGKKNGILPCKRDAELNTVIKILI
Ga0209335_103512672	3300025894	Pelagic Marine	LLCDNPKTASQVTHNIYTIHASYDTKYCSFGRFFGKKNGILPSEQDTDLNMVFKILI
Ga0209425_102347732	3300025897	Pelagic Marine	MSLVTHNIYTIHAHYDTKYCSFDRFFGKKIGFLHQEQDTSLNMVLKILI
Ga0247600_10845282	3300026461	Seawater	HYDTKYCSFDRFFGKKIGFLSQEQDTNLNMVFKILI
Ga0247592_11154842	3300026500	Seawater	MSQVSHNIYTIYASYDTKYCSFGRFFDKKIGILPSKQDTDLKMLFKLLI
Ga0247587_11662891	3300026504	Seawater	MSLVTHNIYTIHAHYDTKYCSLDCFFGKKIGFLPQEQ
Ga0247587_11689022	3300026504	Seawater	LPSDNSKITSLITHNIYTIHAHYDTKYCSFDRFFGKKIGFLPQEQDTNLKMVFKILI
Ga0207994_10718952	3300027416	Estuarine	YDTKYCSFGRFFDKKIGILPSRQDTDLNMLFKLLI
Ga0228674_12146131	3300028008	Seawater	MSQVTHNIYTIYASYDTKYCSFGRFFDKKIGILPSKQDTDLRMLFKLLI
Ga0247584_11385102	3300028110	Seawater	LLGDNSKKTPLFTHNIYTIRAHYDTKYCSFDRFFGKKIGFLPQEQDINLNVVFKALI
Ga0233397_10966522	3300028111	Seawater	MSIVTHNIYTIHAHYDTKYCSFDRFFGKKIGFLPQE
Ga0228609_11534741	3300028133	Seawater	SYDTKYCSFGRFFGKKNGILPCKQDTELNVVSKLFI
Ga0256411_11700461	3300028134	Seawater	LLSDNSKITSLFTHNIYTIHAHYDTKYCSFDRFFGKKICFLPQEHDADLNLVFKY
Ga0256411_12056852	3300028134	Seawater	TIYASYDTKYCSFGRFFSKKTGILPCKQDTELNLVFKILI
Ga0257114_10256831	3300028196	Marine	MSQVTHNIYTINASYDTKYCSFDRFFGKKNGILPCKRDAELNT
Ga0257114_11079931	3300028196	Marine	NAKAMSQVTHNIYTINASYDTKYCSFDRFFGKKNGILPCKRDAELNTVIKILI
Ga0257126_11611122	3300028287	Marine	MSQVTHNIYTINASYDTKYCSFDRFFGKKNGILPCKQDAELNMVIKILI
Ga0302114_103153401	3300031621	Marine	VKTMSQVMHNIYTIYASYDTKYCSFDRFFGKKNSILPCKQDTELNMDFKILI
Ga0315315_101337303	3300032073	Seawater	MSQVTHNIYTIYARYDTKYCIFGRFFGKKNGILPCKQDTELNMVFKALI
Ga0315315_105676962	3300032073	Seawater	MSIVTHNIYTIHAHYDTKYCSFDRFFGKKIGLLPQEQDTDLKMVFKILI
Ga0315321_106024782	3300032088	Seawater	MSIVTHNIYTIHAHYDTKYCSFDRFFGKKIGFLSQEQDTNL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters