NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F043870

Metagenome / Metatranscriptome Family F043870

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F043870
Family Type Metagenome / Metatranscriptome
Number of Sequences 155
Average Sequence Length 67 residues
Representative Sequence EFQLFDFSVLNKLSPGAKGTSEAIEFICPRTALKQFVNAEITNQQLLDQSFILVNGVRIALNLQLVE
Number of Associated Samples 122
Number of Associated Scaffolds 155

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 2.14 %
% of genes near scaffold ends (potentially truncated) 85.81 %
% of genes from short scaffolds (< 2000 bps) 76.13 %
Associated GOLD sequencing projects 112
AlphaFold2 3D model prediction Yes
3D model pTM-score0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (88.387 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(15.484 % of family members)
Environment Ontology (ENVO) Unclassified
(20.645 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(58.710 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.
1cont_0484.00004790
2AF_2010_repII_A100DRAFT_10333301
3JGI1027J11758_130381093
4JGI12635J15846_100957244
5JGIcombinedJ26739_1012012911
6JGIcombinedJ26739_1018316541
7Ga0068925_13264673
8Ga0068957_13999591
9Ga0066672_103948992
10Ga0066673_103772871
11Ga0066679_100029111
12Ga0066679_104403443
13Ga0066690_101683942
14Ga0066684_109816511
15Ga0066671_101154801
16Ga0070714_1011611662
17Ga0066682_101327781
18Ga0070707_1002358111
19Ga0070707_1006081681
20Ga0070707_1012105391
21Ga0070707_1023395761
22Ga0070699_1015530742
23Ga0073909_106937381
24Ga0070730_1000019279
25Ga0070732_110043551
26Ga0066698_101406784
27Ga0066700_102268032
28Ga0066670_104606562
29Ga0066903_1017140262
30Ga0066903_1086677252
31Ga0080027_101110881
32Ga0075028_1005634881
33Ga0075029_1013234261
34Ga0075019_101774991
35Ga0075015_1000485843
36Ga0075030_1001499291
37Ga0075030_1005242763
38Ga0075030_1012787661
39Ga0066653_100154491
40Ga0066659_100070726
41Ga0079221_114853521
42Ga0079220_100652671
43Ga0079220_107424331
44Ga0079220_114933752
45Ga0066710_1007280921
46Ga0099829_108152011
47Ga0099828_110481302
48Ga0099828_112430631
49Ga0099828_116142281
50Ga0126374_111996852
51Ga0126380_117021551
52Ga0126373_122986721
53Ga0134082_101969551
54Ga0126370_100351103
55Ga0126372_103822472
56Ga0126372_116063161
57Ga0126372_124733831
58Ga0126378_100650541
59Ga0126378_129465081
60Ga0126378_133935681
61Ga0126379_103537421
62Ga0126379_129117431
63Ga0126381_1000498981
64Ga0126381_1012269341
65Ga0126383_127080812
66Ga0138526_10388701
67Ga0138576_10664023
68Ga0150983_110332562
69Ga0137392_110258272
70Ga0137392_115458941
71Ga0137393_108284452
72Ga0137393_116389231
73Ga0137393_117783481
74Ga0137388_105465511
75Ga0137388_112783411
76Ga0137388_119212031
77Ga0137383_109659521
78Ga0137381_113470212
79Ga0137381_115508561
80Ga0137379_115740802
81Ga0137378_103742252
82Ga0137378_109006591
83Ga0137377_100243251
84Ga0137372_106473942
85Ga0137386_111750132
86Ga0137384_100613962
87Ga0137384_114166341
88Ga0126369_101231922
89Ga0134077_101439702
90Ga0134079_106863471
91Ga0134079_106998591
92Ga0182015_108597182
93Ga0134072_104932601
94Ga0182041_111051621
95Ga0182037_111028331
96Ga0182038_106700662
97Ga0187818_100837341
98Ga0187819_102586332
99Ga0187778_101260312
100Ga0187778_101465021
101Ga0187776_104595641
102Ga0187781_111808391
103Ga0187777_105259503
104Ga0187822_102234641
105Ga0187816_100888802
106Ga0187868_12327691
107Ga0066667_117102231
108Ga0210403_100435603
109Ga0210405_113933202
110Ga0187846_101866632
111Ga0210409_117230941
112Ga0126371_130703622
113Ga0126371_138623842
114Ga0247679_10010543
115Ga0247666_10657021
116Ga0247678_10437481
117Ga0207663_103571261
118Ga0207646_108473052
119Ga0207664_118306682
120Ga0207665_110575001
121Ga0209468_10868082
122Ga0209155_10396981
123Ga0209471_100002515
124Ga0257173_10468582
125Ga0209807_13100041
126Ga0209648_103841982
127Ga0209117_11152031
128Ga0209736_10757972
129Ga0209736_12116661
130Ga0209118_10102051
131Ga0209118_12036161
132Ga0209178_14400851
133Ga0209448_100201584
134Ga0209283_103181811
135Ga0209068_109168042
136Ga0209698_100108526
137Ga0247663_10838191
138Ga0075388_112095761
139Ga0170823_130085491
140Ga0170824_1204121021
141Ga0170824_1215724501
142Ga0170818_1008889422
143Ga0318555_107609862
144Ga0310686_1055550401
145Ga0310686_1082463243
146Ga0306917_100040246
147Ga0307477_107365612
148Ga0307475_114740021
149Ga0318546_109585131
150Ga0306919_110712841
151Ga0318520_106476211
152Ga0310910_108348241
153Ga0318531_104882752
154Ga0318540_100031871
155Ga0307471_1026945151
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 14.74%    β-sheet: 20.00%    Coil/Unstructured: 65.26%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

5101520253035404550556065EFQLFDFSVLNKLSPGAKGTSEAIEFICPRTALKQFVNAEITNQQLLDQSFILVNGVRIALNLQLVESequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.56
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
88.4%11.6%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Peatland
Bog Forest Soil
Freshwater Sediment
Watersheds
Soil
Vadose Zone Soil
Tropical Forest Soil
Grasslands Soil
Surface Soil
Peatlands Soil
Agricultural Soil
Soil
Grasslands Soil
Soil
Forest Soil
Soil
Hardwood Forest Soil
Tropical Peatland
Prmafrost Soil
Palsa
Soil
Tropical Forest Soil
Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Agricultural Soil
Biofilm
Simulated
5.8%15.5%11.6%3.2%3.2%10.3%9.7%3.2%3.2%3.2%5.8%5.2%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
cont_0484.000047902166559005SimulatedLKDLLDRISPDAEFQLFDFSVLNKLSPGAKGTSEAIEFICPRTALKQFVNAEITNQQLLDQSVILVNGVRIALNLQLVE
AF_2010_repII_A100DRAFT_103333013300000655Forest SoilKLSPTAKESSEAVEFICPRAALKKFINAEITNQQLLDESIVLVNGVRIALNLQLVE*
JGI1027J11758_1303810933300000789SoilISSDIGFQLFDFSVLNKLSPGAKGTSEAIEFICPRTAFKQFVKAEITNQQLLDQSVILVNGVGIALNLQLVE*
JGI12635J15846_1009572443300001593Forest SoilAPQMKDLSDRISPDVEFQFLDFSVLNKLSPGPKGTSEAIEFICPRAAVKRFVNAEITNQQLLDQSIILVNGVRIALNLQLVE*
JGIcombinedJ26739_10120129113300002245Forest SoilDFSVLNKLSPCAKGASEAIEFICPRTALNQFVNAEITNQQLLDQSVILVNGVRIALNLQLVE*
JGIcombinedJ26739_10183165413300002245Forest SoilLNKLSPGAKGTSEAVEFICPRTALKQFVNADITNQQLLDQSVILVNGVRIALNLQLVE*
Ga0068925_132646733300004611Peatlands SoilSEAIEFICPRNALRQFADADITNQQLIDESIVLVNGVRIALNLQLVE*
Ga0068957_139995913300004620Peatlands SoilQLGAGLGSSSEAIEFICPRNALRQFADADITNQQLIDESIVLVNGVRIALNLQLVE*
Ga0066672_1039489923300005167SoilLLKDLSDRVSPDVEFQLFDFSVLNKLPPMAKETSEAVEFICPRKALKQFVNAEITNQRLLDQSIVLVNGVRIALNLQLVE*
Ga0066673_1037728713300005175SoilSPGPKGTSEAIEFICPRAAVKQFVNAEITNQQLLDQSIILVNGVRIALNLQLVE*
Ga0066679_1000291113300005176SoilLLKDLSDRVSSDVEFQLFDFSVLNKLSPLAKETSEAVEFICPRKALKQFVNAEITNQQLLDQSIVLVNGVRIALNLQLVE*
Ga0066679_1044034433300005176SoilDLEFQLFDFSVLNKLSPGAKGTSEAIEFICPRTALKQFVNAEITNQQLLDQSVVLVNGVRIALNLQLVE*
Ga0066690_1016839423300005177SoilVSSDVEFQLFDFSVLNKLSPLAKETSEAVEFICPRKALKQFVNAEITNQQLLDQSIVLVNGVRIALNLQLVE*
Ga0066684_1098165113300005179SoilEFQLFDFSVLNKLSPGAKGTSEAIEFICPRTALKQFVNAEITNQQLLDQSFILVNGVRIALNLQLVE*
Ga0066671_1011548013300005184SoilLLKDLSDRVSPDVEFQLFDFSVLNKLPPMAKETSEAVEFICPRKALKQFVNAETTNQRLLDQSIVLVNGVRIALNLQLVE*
Ga0070714_10116116623300005435Agricultural SoilPQLKDLSGKIGADVEFQLYDLSVLNKLTPGAKGTSEAIEFICPRAALRQFVNAEITNQQLLDQSVILVNGVRIALNLQLVE*
Ga0066682_1013277813300005450SoilLAPQMKDLSDRISPDVEFQFLDFSVLNKLSPGPKGTSEAIEFICPRAAVKQFVNAEITNQQLLDQSIILVNGVRIALNLQLVE*
Ga0070707_10023581113300005468Corn, Switchgrass And Miscanthus RhizosphereIEFQLFDFSVLNKLSPAAKGTSEAIEFICPRTALKQFVNAEITNQQLLDQSIILVNGVRIALNLQLVE*
Ga0070707_10060816813300005468Corn, Switchgrass And Miscanthus RhizosphereSDRISPDIEFQLFDFSVLNKLSPSAKGTSEAIEFICPRTALKQFVNAEITNQQLLDQSFILVNGVRIALNLQLVE*
Ga0070707_10121053913300005468Corn, Switchgrass And Miscanthus RhizosphereSDRISPDLEVQLFDFSVLNKLSPSAKATSEAIEFICPRIAFKQFVNAEITNQQLLDQSVILVNGVRIALNLQLVE*
Ga0070707_10233957613300005468Corn, Switchgrass And Miscanthus RhizospherePGPKGTSEAIEFICPRGALRQFIDAEITNQQLLDQSVILVNGVRIALNLQLVE*
Ga0070699_10155307423300005518Corn, Switchgrass And Miscanthus RhizosphereLKDLSDRISPDIEFQLFDFSVLNKLSPAAKSTSEAIEFICPRTALKQFVNAEITNQQLLDQSIILVNGVRIALNLQLVE*
Ga0073909_1069373813300005526Surface SoilDISSRISGDVDFQLYDFSVLNKLSPAAKETSEAIEYICPRMAVQQFVNAEITNQQLLDQSVVLVNGVRIALNLQLVE*
Ga0070730_10000192793300005537Surface SoilFSVLNKLSPGPKGTSEAIEFICPRAAVKQFVNAEITNQQLLDQSFILVNGVRIALNLQLVE*
Ga0070732_1100435513300005542Surface SoilDAPFDAYDITVLNQLGSEPRGSSEAVEFICPRSALREFVNADITNQQLVDKSIVLVNGVRIALNLQLVE*
Ga0066698_1014067843300005558SoilNKLSPGPKGTSEAIEFICPRAAVKQFVNAEITNQQLLDQSIILVNGVRIALNLQLVE*
Ga0066700_1022680323300005559SoilFSVLNKLSPTAKETSEAVEFICPRAELKKFVNAEITNQQLLDQSVVLVNGVRIALNLQLVE*
Ga0066670_1046065623300005560SoilDVEFQFLDFSVLNKLSPGLKGTSEAIEFICPRAAVKQFVNAEITNQQLLDQSIILVNGVRIALNLQLVE*
Ga0066903_10171402623300005764Tropical Forest SoilNKLSPTAKGTSEAVEFICPRAALKKFVNAEITNQQLLDESIVLVNGVRIALNLQLVE*
Ga0066903_10866772523300005764Tropical Forest SoilSPGAKETSEAIEFICPRKALRQFVNAEITNQQLLDQSVVLVNGVRIALNLQLVE*
Ga0080027_1011108813300005993Prmafrost SoilPQLRDLSDLVSPDMEFQLFDFSVLNKLSLGAKGTSEAIEFICPRIALKQFVNANITNQQLLDQSIILVNGVRIALNLQLVE*
Ga0075028_10056348813300006050WatershedsFEGFDITILNQFGSDPHSSSEAVEFICPRIALRNFVNADITNQQLIDQSIVLVNGVRIALNLQLVE*
Ga0075029_10132342613300006052WatershedsLLDKVPGEATFDGYDITVLNQLGPDPHASSEAIEFICPRRALSQFADADITNQQLIDQSIVLVNGVRIALNLQTAE*
Ga0075019_1017749913300006086WatershedsNKLSPGAKGTSEAMEFICPRNALRQFVDAEITNQQLLDQSVVLVNGVRIALNLQLVE*
Ga0075015_10004858433300006102WatershedsNKLSPGPKGTSEAIEFICPKAALQQFVNAEITNQQLLDQSIILVNGVRISLNLQLVE*
Ga0075030_10014992913300006162WatershedsPKGASEAIEFICPRPALKQFVNAEITNQQLLDQSIILVNGVRIALNLQLVE*
Ga0075030_10052427633300006162WatershedsQLFDFSVLNKLSPGAKGTSEAIEFICPRTALWQFVNAEITNQQLLDQSVILVNGVRIGLNLQLAE*
Ga0075030_10127876613300006162WatershedsDASFEGFDITILNQFGSDPHSSSEAVEFICPRVALRNFVNADITNQQLIDQSIVLVNGVRIALNLQLVE*
Ga0066653_1001544913300006791SoilVEFQFLDFSVLNKLSPGPKGTSEAIEFICPRAAVKQFVNAEITNQQLLDQSIILVNGVRIALNLQLVE*
Ga0066659_1000707263300006797SoilADKISPDLEFQLFDFSVLNKLSPGAKGTSEAIEFICPRTALKQFVNAEITNQQLLDQSFILVNGVRIALNLQLVE*
Ga0079221_1148535213300006804Agricultural SoilNKLSPGPKGTSEAIEFICPRAAVKQFVNAEITNQQLLDQSFILVNGVRIALNLQLVE*
Ga0079220_1006526713300006806Agricultural SoilDFSVLNKLSPAAKETSEAIEFICPRKALKQFVNAEITNQQLLEQSIVLVNGVRIALNLQLVE*
Ga0079220_1074243313300006806Agricultural SoilQFASDARSSSEAVEFICPRDALRQFVDADITNQQLLDQSIVLVNGVRIALNLQLVE*
Ga0079220_1149337523300006806Agricultural SoilSVLNKLSPGAKESSEAIEFICPRAALRQFVNAEITNQQLLDQSIVLVNGVRIALTLQLVE
Ga0066710_10072809213300009012Grasslands SoilGPKGTSEAIEFICPRAAVKQFVNAEITNQQLLDQSIILVNGVRIALNLQLVE
Ga0099829_1081520113300009038Vadose Zone SoilMKDLSDRISLDVEFQFLDFSVINKLSPGPKGTSEAIEFICPRAAVKQFVNAEITNQQLLDQSIVLVNGVRIALNLQLVE*
Ga0099828_1104813023300009089Vadose Zone SoilDLEFQLFDFSVLNKLSPGAKGTSEAIEYICPRTALKQFVNAEITNQQLLDQSVVLVNGVRIALNLQLVE*
Ga0099828_1124306313300009089Vadose Zone SoilVLNQLAPGPKGSSEAIEFICPRQALRQFADAEITNQQLIDQSVVLVNGVRIALNLQLVE*
Ga0099828_1161422813300009089Vadose Zone SoilLNQLAPGPKGSSEAIEFICPRKALRQFADAEITNQQLIDQSVVLVNGVRIALNLQLVE*
Ga0126374_1119968523300009792Tropical Forest SoilDLSERISPDVEFQLFDFSVLNKLSPVAKQTSEAIEFICPRQALRQFVNAEITNQQLLDQSIVLVNGVRIALNLQLVE*
Ga0126380_1170215513300010043Tropical Forest SoilDVDFQLYDFSVLNRLSPIAKETSEAIEYICPRGAVQQFVNAEITNQQLLDQSVVLVNGVRIALNLQLVE*
Ga0126373_1229867213300010048Tropical Forest SoilDFSVLNKLSPTAKATSEAIEFICPRKALKQFVNAEITNQQLLDQSIVLVNGVRIALNLQLVE*
Ga0134082_1019695513300010303Grasslands SoilDISERVSPDVEFQLFDFSVLNKLTPAKKTSEAIEFICPRKALKQLLDESMVLVNGVRIALNLQLVE*
Ga0126370_1003511033300010358Tropical Forest SoilSSRISEDVDFQLYDFSVLNKLSPTAKETSEAIEYICPRGAVQQFVNAEITNQQLLDQSVVLVNGVRIALNLQLVE*
Ga0126372_1038224723300010360Tropical Forest SoilISEDVDFQLYDFSVLNKLSPTAKETSEGIEYICPRGAVQQFVNAEITNQQLLDQSVVLVNGVRIALNLQLVE*
Ga0126372_1160631613300010360Tropical Forest SoilTAKETSEAIEFICPRKALTQFVNAEITNQQLLDQSIVLVNGVRIALNLQLVE*
Ga0126372_1247338313300010360Tropical Forest SoilLSPVGKETSEAIEYICPRGAVQQFVNAEITNQQLLDQSVVLINGVRIALNLQLVE*
Ga0126378_1006505413300010361Tropical Forest SoilPDVEFQLFDFSVLNKLSPTAKGTSEAIEFVCPRKALRQFVNAEITSQQLLDQSIVLVNGVRIALNLQLVE*
Ga0126378_1294650813300010361Tropical Forest SoilNKLSPTAKETSEAIEFICPRKALKQFVNAEITNQQLLDQSIILVNGVRIALNLQLVE*
Ga0126378_1339356813300010361Tropical Forest SoilRISAAIKFQHSNFSVLNKLSPPTKATSETVEFICPRKALRQFVNAAITNQQLLDQSIVLVNGVRIALNLQLVE*
Ga0126379_1035374213300010366Tropical Forest SoilETSEAIEYICPRGAVQQFVNAEITNQQLLDQSVVLVNGVRIALNLQLVE*
Ga0126379_1291174313300010366Tropical Forest SoilKETSEAIEFICPPKALKQFVNAEITNQQLLDQSIILVNGVRIGLNLQLVE*
Ga0126381_10004989813300010376Tropical Forest SoilNKLSPGAKETSEAIEFICPRKALRQFVNAEITNQQLLDQSFVLVNGVRIALSLQLVE*
Ga0126381_10122693413300010376Tropical Forest SoilLFLAPLLKDISERVSPDVEFQLFDFSVLNKLSPTAKETSEAIEFICPRKALKQFVNAEITNQQLLDQSVVLVNGVRIALNLQLVE*
Ga0126383_1270808123300010398Tropical Forest SoilFDLFLALLLKDISERVSLDVEFQLFDFSVLNKLSPGAKETSEGIEFISPRKALRQFVNAEITNQQLLDQSVVLVNGVRIALNLQLVE*
Ga0138526_103887013300011082Peatlands SoilEAAFEGYDITVLNQLGAGLGSSSEAIEFICPRNALRQFADADITNQQLIDESIVLVNGVRIALNLQLVE*
Ga0138576_106640233300011088Peatlands SoilPAEAAFEGYDITVLNQLGAGLGSSSEAIEFICPRNALRQFADADITNQQLIDESIVLVNGVRIALNLQLVE*
Ga0150983_1103325623300011120Forest SoilLSEKISPDLEFQLFDFSVLNKISPGVKGTSGAIEFICPQTALRQFVNAEITNQQLLDQSVILVNGVRIGLNLQLVE*
Ga0137392_1102582723300011269Vadose Zone SoilAKGTSEAIEFICPRTALKQFVNAEITNQQLLDQSVILVNGVRIALNLQLVE*
Ga0137392_1154589413300011269Vadose Zone SoilPQMKDLSDRISPDVEFQFLDFSVLNKLSPGPKGTSEAIEFICPRAAVKQFVNAEITNQQLLDQSIILVNGVRIALNLQLVE*
Ga0137393_1082844523300011271Vadose Zone SoilVLNQLAPGPKGSSEAIEFICPRKTLRQFADDEITNQQLIDQSVVLVNGVRIALNLQLVE*
Ga0137393_1163892313300011271Vadose Zone SoilLFLAPQMKDLSDRISPDVEFQFLDFSVLNKLSPGPKGTSEAIEFICPRAAVKQFVNAEITNQQLLDQSIILVNGVRIALNLQLVE*
Ga0137393_1177834813300011271Vadose Zone SoilLFLAPQMKDLSDRISPDVEFQFLDFSVLNKLSPGPKGTSEAIEFICPRAAVKQFVNAEITNQQLLDQSVILVNGVRIALNLQLVE*
Ga0137388_1054655113300012189Vadose Zone SoilYQLLDFSVLNKLSPGAKGTSEAIEFICPRNALKQFVNAEITNQQLLDQSFILVNGVRIALNLQLVE*
Ga0137388_1127834113300012189Vadose Zone SoilFLAPQLKDLSDRISPDIEFQLLDFSVLNKLSPGAKGASEAIEFICPRATLKQFVNAEITNQQLLDQSIILFNGVRIALNLQLVE*
Ga0137388_1192120313300012189Vadose Zone SoilQFFDFSVLNKLSPGPKGTSEAIEFICPRTALKQFVNAEITNQQLLDQSVILVNGVRVALNLQLVE*
Ga0137383_1096595213300012199Vadose Zone SoilGPKGTSEAIEFICPRAAVKQFVNAEITNQQLLDQSIILVNGVRIALNLQLVE*
Ga0137381_1134702123300012207Vadose Zone SoilKDLSDRIGLDVEFQFFDFSVLNKLSPGAKGTSEAIEFICPRSALKQFVNAEITNQQLLDQSVILVNGVRIALNLQLVE*
Ga0137381_1155085613300012207Vadose Zone SoilKLFDFSVLNKLSPGAKGTSEAIEFICPRNALAQFVNAEITNQQLLDQSVILVNGVRIALNLQLVE*
Ga0137379_1157408023300012209Vadose Zone SoilLDFSVLNKLSPGPKGTSEAIEFICPRAAVKQFVNAEITNQQLLDQSIILVNGVRIALNLQLVE*
Ga0137378_1037422523300012210Vadose Zone SoilDRISPDVEFQFFDFSVLNKLSPGPKGTSEAIEFICPRTALKQFVNAEITNQQLLDQSIILVNGVRIGLNLQLVE*
Ga0137378_1090065913300012210Vadose Zone SoilLAPGAKGASEAIEFICPRTALKQFVNADITNQQLLDQSVVLVNGVRIALNLQLVE*
Ga0137377_1002432513300012211Vadose Zone SoilLSPGPKGTSEAIEFICPRAAVKQFVNAEITNQQLLDQSIILVNGVRIALNLQLVE*
Ga0137372_1064739423300012350Vadose Zone SoilLSDRISPDVEFQFFDFSVLNKLSPGPKGTSEAIEFICPRVAVKQFVNAEITNQQLLDQSIILVNGVRIALNLQLVE*
Ga0137386_1117501323300012351Vadose Zone SoilDFSVLNKLSPGPKGTSEAIEFICPRAAVKQFVNAEITNQQLLDQSIILVNGVRIALNLQLVE*
Ga0137384_1006139623300012357Vadose Zone SoilVEFELFDFSVLNKLSPTAKETSEAVEFICPRAELKKFVNAEITNQQLLDQSVVLVNGVRIALNLQLVE*
Ga0137384_1141663413300012357Vadose Zone SoilPDLEFPLFDFSVLNKLSPGAKGSSEAIEFICPRAALKQFVNAEITNQQLLDQSAILVNGVRIALNLQLV*
Ga0126369_1012319223300012971Tropical Forest SoilDFSVLKKLSPIAKETSEAIEYICQRDAVRQFVNAEITNQQLLDQSVILVNGVRIALNLQLVE*
Ga0134077_1014397023300012972Grasslands SoilTSEAIEFICPRAAVKQFVNAEITNQQLLDQSIILVNGVRIALNLQLVE*
Ga0134079_1068634713300014166Grasslands SoilQLKDLSDRISPDLQFQLFDFSVLNKLSPGVKGSSEAIEFICPRTALKQFVNAEITNQQLLDQSVVLVNGVRIALNLQLVE*
Ga0134079_1069985913300014166Grasslands SoilLNKLSPGPKGTSEAIEFICPRAAVKQFVNAEITNQQLLDQSIILVNGVRIALNLQLVE*
Ga0182015_1085971823300014495PalsaSVLNHMGAGKGSSEAIEFICPSKSLQAFARDEITTQDLIDQSIVLVNGVRIALNLQIVE*
Ga0134072_1049326013300015357Grasslands SoilRLSPGVKGSSEAIEFICPRTALKQFVNAEITNQQLLDQSVVLVNGVRIALNLQLVE*
Ga0182041_1110516213300016294SoilFAVLNKLSPTAKGTSEAVEFVCPRAALKKFVNAEITNQQLLDESIVLVNGVRIALNLQLV
Ga0182037_1110283313300016404SoilLFLAPLLKDLSARISPDVEFQLVDFTVLNRLSPGAKESSEAVEFICPWAAVKQFISAEITNQKLLDQSIILVNGVRIALNLQMVE
Ga0182038_1067006623300016445SoilDVEFQLYDFSVLNKLSPGAKESSEAVEFICPRSALRRFINAEITNQQLLDESIILVNGVRISLTLQLVE
Ga0187818_1008373413300017823Freshwater SedimentARISPDVEFQLFDFSVLNKLSPGTKEASEAIEFICPRAALKKFVDAEITNQQLLDQSVILVNGVRIALNLQLVE
Ga0187819_1025863323300017943Freshwater SedimentLAPQLKDLMARISPDVEFQLFDFSVLNKLSPGTKEASEAIEFICPRAALKKFVDAEITNQQLLDQSVILVNGVRIALNLQLVE
Ga0187778_1012603123300017961Tropical PeatlandAPGGKATSEAIEFICPRAALKKFVEAEITNQQLLDQSFILVNGVRIALNLQLVE
Ga0187778_1014650213300017961Tropical PeatlandVLNKLSPGAKGTSEAIEFICPRNALRQFVNAEITNQQLLDQSVVLVNGVRIALNLQLVE
Ga0187776_1045956413300017966Tropical PeatlandTSEAIEFICLRKVLIQFVNAEITNQQLLDQSVILVNGVRIALNLQLVE
Ga0187781_1118083913300017972Tropical PeatlandLNKLSATAKETSEAIEFICPRTALKQFVNAEITNQQLLDQSVVLVNGVRIALNLQLVE
Ga0187777_1052595033300017974Tropical PeatlandILDKVPGDAPFAGYDITVVNQLGADAHSPSEAIEFICPRIALRQFVDADITNQQLIEQSIVLVNGVRIALNLQLVE
Ga0187822_1022346413300017994Freshwater SedimentDANFDAYDFTVLNQLGPDQRSSSEAIEYISPRKVLQQFVNAEITGQQVIDQSVVLVNGVRIALNLQLVE
Ga0187816_1008888023300017995Freshwater SedimentEATFGGYDITILNQLGADSHSSSEAIEFICPREALRQFIEADITNQQLIDRSVVLVNGVRIALNLQIVE
Ga0187868_123276913300018002PeatlandFTIVNQLAAEPHPSSEAAEFIIPVKGLRQFVDAEITNQQLIDHSIVLINGVRIALNLQLV
Ga0066667_1171022313300018433Grasslands SoilKGTSEAIEFICPRAAVKQFVNAEITNQQLLDQSIILVNGVRIALNLQLVE
Ga0210403_1004356033300020580SoilMEVGLPDKLAPGAKGASEAIEFICPRSVLKQFVDAEITNQQLLDQSFILVNGVRIALNLQLVE
Ga0210405_1139332023300021171SoilLEFQLFDFSVLNKISPGVKGASEAIEFICPQTALRQFVNAEITNQQLLDQSVILVNGVRIGLNLQLVE
Ga0187846_1018666323300021476BiofilmLLDKTPADAEFDAYDFSVLNQLAAAPHPLSEAIEFICPRKAARQFADAEITNQQLIDQSVVLVNGVRVALNLQLVE
Ga0210409_1172309413300021559SoilMKDLSDRISPDVEFQFLDFSVLNKLSPGPKGTSEAIEFICPRAAVKQFVNAEITNQQLLDQSIILVNGVRIALNLQLVE
Ga0126371_1307036223300021560Tropical Forest SoilFSVLNKLSPTAKETSDAIEFICPRKALKQFVSAEITNQQLLDQSVVLVNGVRIALNLQLV
Ga0126371_1386238423300021560Tropical Forest SoilSEAIEYICPRGAIQQFVNAEITNQQLLDQSVVLVNGVRIALNLQLVE
Ga0247679_100105433300024251SoilLADLHARIPADMEFQLFDLSVMNKLGPGPKAASEAVEFICPRTALRRFVNAEITNQQLLDQSIILVNGVRIGLNLQLVE
Ga0247666_106570213300024323SoilVLNKLSPTARESSEAIEFICPRAALKRFINAEITNQQLLDQSIILVNGVRISLSLQLVE
Ga0247678_104374813300024325SoilDLSVLNKLGPGPKARSEAVELICPRAALRRFVNAEITNQQLLDQSIILVNGVRISLNLQLVE
Ga0207663_1035712613300025916Corn, Switchgrass And Miscanthus RhizosphereAPQLKDLSGKIGADVEFQLYDLSVLNKLTPGAKGTSEAIEFICPRAALRQFVNAEITNQQLLDQSVILVNGVRIALNLQLVE
Ga0207646_1084730523300025922Corn, Switchgrass And Miscanthus RhizosphereAPQLKDLSDRISPDIEFQLFDFSVLNKLSPSAKGTSEAIEFICPRTALKQFVNAEITNQQLLDQSFILVNGVRIALNLQLVE
Ga0207664_1183066823300025929Agricultural SoilKAGSEAVEFICPRAALRRFVNAEITNQQLLDQSIILVNGVRISLNLQLVE
Ga0207665_1105750013300025939Corn, Switchgrass And Miscanthus RhizosphereFQLFDFSVLNKLSPGPKGSSEAIEFICPRTALKQFVNAEITNQQFLDQSVILVNGVRIALNLQLVE
Ga0209468_108680823300026306SoilPGLKGTSEAIEFICPRAAVKQFVNAEITNQQLLDQSIILVNGVRIALNLQLVE
Ga0209155_103969813300026316SoilRISPNVEFQFLDFSVLNKLSPGPKGTSEAIEFICPRAAVKQFVNAEITNQQLLDQSIILVNGVRIALNLQLVE
Ga0209471_1000025153300026318SoilLLKDLSDRVSSDVEFQLFDFSVLNKLSPLAKETSEAVEFICPRKALKQFVNAEITNQQLLDQSIVLVNGVRIALNLQLVE
Ga0257173_104685823300026360SoilPLGLEFQLFDFSVLNRLSPGAKGTSEAIEFICPRTALKQFVNTEITNQQLLDQSVILVNGVRIALTLQLVE
Ga0209807_131000413300026530SoilQLKDLADKISPDLEFQLFDFSVLNKLSPGAKGTSEAIEFICPRTALKQFVNAEITNQQLLDQSFILVNGVRIALNLQLVE
Ga0209648_1038419823300026551Grasslands SoilFLAPLLKDISERVSADVEFQLFDFSVLNKLSPGAKETSEAIEFICPRTALKQFVNAEITNQQLLDQSVVLVNGVRIALNLQLVE
Ga0209117_111520313300027645Forest SoilSPGPKGTSEAIEFICPRTALKQFVNAEITNQQLLDQSIILVNGVRIALNLQLVE
Ga0209736_107579723300027660Forest SoilAPQMKDLSDRISPDVEFQFLDFSVLNKLSPGPKGTSEAIEFICPRAAVKRFVNAEITNQQLLDQSIILVNGVRIALNLQLVE
Ga0209736_121166613300027660Forest SoilFQFFDFSVLNRLAPGPKGASEAIEFICSRVVLKQFVNAEITNQQLLDQSVILVNGVRIALNLQLVE
Ga0209118_101020513300027674Forest SoilPGAKGTSEAIEFICPRTALKQFVNAEITNQQLLDQSVILVNGVRIALNLQLVE
Ga0209118_120361613300027674Forest SoilQLKDLSDRISPDVEFQLFDFSVLNKLSPGAKGTSEAIEFICSRSALKQFLNAEITNQQFLDQSVILVNGVRIALDLQLVE
Ga0209178_144008513300027725Agricultural SoilQLFDFSVLNKLSPTAKETSEAVEFICPRAAVKRFVNAEITNQQLLDQSIVLVNGVRIALTLQLVE
Ga0209448_1002015843300027783Bog Forest SoilDFSVLNKLSPGPKGTSEAIEFICPRTALKQFVNAEITNQQLLDHSFILVNGIRIALNLQLVE
Ga0209283_1031818113300027875Vadose Zone SoilVLNQLAPGPKGSSEAIEFICPRQALRQFADAEITNQQLIDQSVVLVNGVRIALNLQLVE
Ga0209068_1091680423300027894WatershedsDLSDKVSPDLEFQLFDFSVLNKLSPGPKGTSEAIEFICPRTAVKQFVNAEITNQQFLDQSVILVNGVRIALNLQLVE
Ga0209698_1001085263300027911WatershedsFFDFSVMNKLAPGPKGASEAIEFICPRPALKQFVNAEITNQQLLDQSIILVNGVRIALNLQLVE
Ga0247663_108381913300028145SoilISGDVDFQLYDFSVLNKLSPTAKETSEAIEYICPRVALQQFVNAEITNQQLLDQSVVLVNGVRIALNLQLVE
Ga0075388_1120957613300030848SoilEFQLFDFSVLNKLSPGAKGTSEAIEFICPRTALKQFVNAEITNQRLLDQSVILVNGVRIALNLQLVE
Ga0170823_1300854913300031128Forest SoilQLFDFSILNKLSTAVKGSSEAIEFICPRTALKQFVNAEITNQRLLDQSVILVNGVRIALNLQLVE
Ga0170824_12041210213300031231Forest SoilLFLALQLKDLVDKVPAEASFDGYDITVLNQLGPDPHSSSEAIEFICSRRALRQFTDADITNQQLIDQSIVLVNGVRIAHNLQTAE
Ga0170824_12157245013300031231Forest SoilLSTAVKGSSEAIEFICPRTALKQFVNAEITNQRLLDQSVILVNGVRIALNLQLVE
Ga0170818_10088894223300031474Forest SoilEFQLIDFSVLNKLSPGAKGTSEAIEFICPRTALKQFVNAEITNQQFLDQSIILVNGVRIALNLQLVE
Ga0318555_1076098623300031640SoilLKDLSERISPDVEFQLFDLSVLNKLSPTAKQTSEAIEFICPRQALRQFVNAEITNQQLLDQSIVLVNGVRIALNLQLVE
Ga0310686_10555504013300031708SoilFSVLNKLSPGPKGTSEAIEFICPRTALKQFVNAEITNQQLLDHSFILVNGVRIALNLQLV
Ga0310686_10824632433300031708SoilVLNKLASGPKGASEAIEFICPRAALKQFVNAEITNQQFLDQSIILVNGVRIALNLQLVE
Ga0306917_1000402463300031719SoilSVLNKLSPTAKQTSEAIEFICPRQALRQFVNAEITNQQLLDQSIVLVNGVRIALNLQLVE
Ga0307477_1073656123300031753Hardwood Forest SoilDFSVLNKLSPGAKGTSEAIEFICPRTPLKQFVNAEITNQQLLDQSVILVNGVRIALNLQLVE
Ga0307475_1147400213300031754Hardwood Forest SoilLLDRISPDVEFQLFDFSVLNKLSPGPKGTCEAIEFICPRSALKQFVNAEITNQQLLDQSVILVNGVRIALNLQLVE
Ga0318546_1095851313300031771SoilLKDISSRISEDVDFQLYDFSVLNKLSPTAKDTSEAIEYICPRGAVQQFVNAEITNQQMLDQSVVLVNGVRIALNLQLVE
Ga0306919_1107128413300031879SoilEFQLYDFSVLNKLSPGAKESSEAVEFICSRSALRQFIGAEITNQQLLDQSIVLVNGVRVALNLQLVE
Ga0318520_1064762113300031897SoilLLKDLSERISPDVEFQLFDLSVLNKLSPTAKQTSEAIEFICPRQALRQFVNAEITNQQLLDQSIVLVNGVRIALNLQLVE
Ga0310910_1083482413300031946SoilLLKDLSGRISADVEFQLYDFSVLNKLSPGAKESSEAVEFICPRSALRRFINAEITNQQLLDESIILVNGVRISLTLQLVE
Ga0318531_1048827523300031981SoilLSVLNKLSPTAKQTSEAIEFICPRQALRQFVNAEITNQQLLDQSIVLVNGVRIALNLQLV
Ga0318540_1000318713300032094SoilFDLCVLNKLSPTAKQTSEAIEFICPRQALRQFVNAEITNQQLLDQSIVLVNGVRIALNLQLVE
Ga0307471_10269451513300032180Hardwood Forest SoilGASEAIEFICPRSALKQFVDAEITNQQLLDQSFILVNGVRIALNLQLVE


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.