Metagenome Family F043703

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F043703
Family Type	Metagenome
Number of Sequences	156
Average Sequence Length	62 residues
Representative Sequence	MKRRVGRPKGEAATVVNVRIPVSLVERLDRYLDKVETDTGLTTNRGAILRHALKVFLESKKM
Number of Associated Samples	105
Number of Associated Scaffolds	156

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.05 %
% of genes near scaffold ends (potentially truncated)	19.87 %
% of genes from short scaffolds (< 2000 bps)	87.18 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (60.897 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (21.795 % of family members)
Environment Ontology (ENVO)	Unclassified (37.179 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.923 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.22% β-sheet: 0.00% Coil/Unstructured: 57.78%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 156 Family Scaffolds
PF05598	DUF772	17.95
PF13751	DDE_Tnp_1_6	14.10
PF04392	ABC_sub_bind	1.28
PF07592	DDE_Tnp_ISAZ013	1.28
PF00239	Resolvase	1.28
PF13700	DUF4158	1.28
PF12759	HTH_Tnp_IS1	0.64
PF02464	CinA	0.64
PF05036	SPOR	0.64
PF01695	IstB_IS21	0.64
PF00076	RRM_1	0.64
PF13551	HTH_29	0.64
PF13385	Laminin_G_3	0.64
PF13360	PQQ_2	0.64
PF03473	MOSC	0.64
PF01609	DDE_Tnp_1	0.64
PF14104	DUF4277	0.64
PF13439	Glyco_transf_4	0.64
PF00571	CBS	0.64

COG ID	Name	Functional Category	% Frequency in 156 Family Scaffolds
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	1.28
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	1.28
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.28
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.64
COG1546	Nicotinamide mononucleotide (NMN) deamidase PncC	Coenzyme transport and metabolism [H]	0.64
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.64
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.64
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.64
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.64
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.64
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.64

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	60.90 %
Unclassified	root	N/A	39.10 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	60.90 %
Unclassified	root	N/A	39.10 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	60.90 %
Unclassified	root	N/A	39.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.10 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	12.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.69 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.28 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	1.28 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.10 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.13 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.28 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.28 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.28 %
Deinococcus-Thermus	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus	1.28 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.64 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.64 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.64 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.10 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.13 %
Deinococci	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci	1.28 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.28 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.28 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	0.64 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.64 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.64 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.64 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.64 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.10 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.13 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.28 %
Isosphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales	0.64 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	0.64 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.64 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.64 %
Trueperales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Trueperales	0.64 %
Deinococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales	0.64 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.64 %
Desulfovibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales	0.64 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.64 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.10 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.13 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.28 %
Ktedonobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae	0.64 %
Isosphaeraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	0.64 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.64 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	0.64 %
Deinococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae	0.64 %
Trueperaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Trueperales → Trueperaceae	0.64 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.64 %
Desulfovibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales	0.64 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.64 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.10 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.13 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.28 %
Singulisphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera	0.64 %
Polyangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	0.64 %
Deinococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus	0.64 %
Ktedonobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter	0.64 %
Truepera	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Trueperales → Trueperaceae → Truepera	0.64 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.64 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.64 %
Desulfovibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales	0.64 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.64 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.10 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.13 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.28 %
Ktedonobacter racemifer	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	0.64 %
Sorangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium	0.64 %
Truepera radiovictrix	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Trueperales → Trueperaceae → Truepera → Truepera radiovictrix	0.64 %
Singulisphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera	0.64 %
Deinococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus	0.64 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.64 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.64 %
Desulfovibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales	0.64 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.64 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.10 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.13 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.28 %
Truepera radiovictrix DSM 17093	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Trueperales → Trueperaceae → Truepera → Truepera radiovictrix → Truepera radiovictrix DSM 17093	0.64 %
Sorangium cellulosum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	0.64 %
Ktedonobacter racemifer	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	0.64 %
Singulisphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera	0.64 %
Deinococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus	0.64 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.64 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.64 %
Desulfovibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales	0.64 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.64 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.64 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2040502000\|ACOD_FV90NF402IUXX4	Not Available	511	Open in IMG/M
2088090014\|GPIPI_16979870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2659	Open in IMG/M
2162886007\|SwRhRL2b_contig_552356	All Organisms → cellular organisms → Bacteria → Terrabacteria group	987	Open in IMG/M
2228664022\|INPgaii200_c0993638	Not Available	1432	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0527834	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus	530	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100268122	Not Available	541	Open in IMG/M
3300000955\|JGI1027J12803_102297516	Not Available	1060	Open in IMG/M
3300000956\|JGI10216J12902_108159080	Not Available	679	Open in IMG/M
3300002908\|JGI25382J43887_10460103	Not Available	539	Open in IMG/M
3300003203\|JGI25406J46586_10066998	All Organisms → cellular organisms → Bacteria	1138	Open in IMG/M
3300003319\|soilL2_10201385	All Organisms → cellular organisms → Bacteria	1570	Open in IMG/M
3300004267\|Ga0066396_10061200	All Organisms → cellular organisms → Bacteria → Terrabacteria group	627	Open in IMG/M
3300004268\|Ga0066398_10102688	Not Available	665	Open in IMG/M
3300004281\|Ga0066397_10129014	Not Available	559	Open in IMG/M
3300004463\|Ga0063356_100145402	All Organisms → cellular organisms → Bacteria	2690	Open in IMG/M
3300004633\|Ga0066395_10279283	All Organisms → cellular organisms → Bacteria	906	Open in IMG/M
3300004633\|Ga0066395_10996456	Not Available	511	Open in IMG/M
3300005171\|Ga0066677_10083977	All Organisms → cellular organisms → Bacteria	1659	Open in IMG/M
3300005174\|Ga0066680_10381493	Not Available	897	Open in IMG/M
3300005181\|Ga0066678_10566258	All Organisms → cellular organisms → Bacteria → Terrabacteria group	755	Open in IMG/M
3300005294\|Ga0065705_10320888	All Organisms → cellular organisms → Bacteria → Proteobacteria	1011	Open in IMG/M
3300005332\|Ga0066388_102218122	All Organisms → cellular organisms → Bacteria	991	Open in IMG/M
3300005332\|Ga0066388_102367295	Not Available	962	Open in IMG/M
3300005332\|Ga0066388_103088276	All Organisms → cellular organisms → Bacteria → Terrabacteria group	851	Open in IMG/M
3300005332\|Ga0066388_105964120	Not Available	616	Open in IMG/M
3300005332\|Ga0066388_106538779	Not Available	587	Open in IMG/M
3300005332\|Ga0066388_107023525	Not Available	566	Open in IMG/M
3300005544\|Ga0070686_100853717	Not Available	737	Open in IMG/M
3300005552\|Ga0066701_10959746	Not Available	506	Open in IMG/M
3300005598\|Ga0066706_11019605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	637	Open in IMG/M
3300005713\|Ga0066905_100078275	All Organisms → cellular organisms → Bacteria	2161	Open in IMG/M
3300005713\|Ga0066905_100241896	All Organisms → cellular organisms → Bacteria	1380	Open in IMG/M
3300005713\|Ga0066905_100492053	Not Available	1018	Open in IMG/M
3300005764\|Ga0066903_100083761	All Organisms → cellular organisms → Bacteria	4184	Open in IMG/M
3300005764\|Ga0066903_100194569	All Organisms → cellular organisms → Bacteria	3020	Open in IMG/M
3300005764\|Ga0066903_103774539	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300005764\|Ga0066903_106134412	Not Available	629	Open in IMG/M
3300005764\|Ga0066903_106569933	Not Available	605	Open in IMG/M
3300005937\|Ga0081455_10106137	All Organisms → cellular organisms → Bacteria	2243	Open in IMG/M
3300005937\|Ga0081455_10233948	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1354	Open in IMG/M
3300005937\|Ga0081455_10538017	All Organisms → cellular organisms → Bacteria → Terrabacteria group	775	Open in IMG/M
3300005985\|Ga0081539_10008973	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales	8508	Open in IMG/M
3300005985\|Ga0081539_10021405	All Organisms → cellular organisms → Bacteria	4322	Open in IMG/M
3300005985\|Ga0081539_10076156	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	1779	Open in IMG/M
3300006049\|Ga0075417_10019281	All Organisms → cellular organisms → Bacteria	2696	Open in IMG/M
3300006049\|Ga0075417_10130768	All Organisms → cellular organisms → Bacteria	1157	Open in IMG/M
3300006058\|Ga0075432_10120933	Not Available	984	Open in IMG/M
3300006844\|Ga0075428_100065758	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	3971	Open in IMG/M
3300006844\|Ga0075428_101396391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	735	Open in IMG/M
3300006844\|Ga0075428_101421832	Not Available	728	Open in IMG/M
3300006844\|Ga0075428_101841174	Not Available	629	Open in IMG/M
3300006845\|Ga0075421_100166782	Not Available	2746	Open in IMG/M
3300006845\|Ga0075421_100442387	All Organisms → cellular organisms → Bacteria	1554	Open in IMG/M
3300006845\|Ga0075421_101676458	Not Available	688	Open in IMG/M
3300006847\|Ga0075431_101191782	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300006854\|Ga0075425_100889077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1019	Open in IMG/M
3300006854\|Ga0075425_102962056	Not Available	520	Open in IMG/M
3300006880\|Ga0075429_100257656	Not Available	1527	Open in IMG/M
3300006894\|Ga0079215_10278214	Not Available	908	Open in IMG/M
3300007076\|Ga0075435_101217363	Not Available	659	Open in IMG/M
3300007258\|Ga0099793_10043269	All Organisms → cellular organisms → Bacteria	1962	Open in IMG/M
3300009098\|Ga0105245_13136430	Not Available	512	Open in IMG/M
3300009137\|Ga0066709_101086548	All Organisms → cellular organisms → Bacteria	1175	Open in IMG/M
3300009143\|Ga0099792_11022380	Not Available	553	Open in IMG/M
3300009146\|Ga0105091_10200271	All Organisms → cellular organisms → Bacteria	950	Open in IMG/M
3300009147\|Ga0114129_10177260	All Organisms → cellular organisms → Bacteria	2903	Open in IMG/M
3300009147\|Ga0114129_10304163	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	2124	Open in IMG/M
3300009156\|Ga0111538_13904140	Not Available	516	Open in IMG/M
3300009792\|Ga0126374_10093229	All Organisms → cellular organisms → Bacteria	1686	Open in IMG/M
3300009792\|Ga0126374_11761558	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300009811\|Ga0105084_1089271	Not Available	574	Open in IMG/M
3300009836\|Ga0105068_1008541	All Organisms → cellular organisms → Bacteria	1636	Open in IMG/M
3300010038\|Ga0126315_10501972	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300010041\|Ga0126312_11038938	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300010043\|Ga0126380_11176289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Trueperales → Trueperaceae → Truepera → Truepera radiovictrix → Truepera radiovictrix DSM 17093	659	Open in IMG/M
3300010043\|Ga0126380_11339997	Not Available	625	Open in IMG/M
3300010046\|Ga0126384_11231464	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300010046\|Ga0126384_12413057	Not Available	509	Open in IMG/M
3300010047\|Ga0126382_10173782	All Organisms → cellular organisms → Bacteria	1504	Open in IMG/M
3300010047\|Ga0126382_10183779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1470	Open in IMG/M
3300010047\|Ga0126382_10449231	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1021	Open in IMG/M
3300010047\|Ga0126382_11330618	All Organisms → cellular organisms → Bacteria → Terrabacteria group	651	Open in IMG/M
3300010358\|Ga0126370_11290387	Not Available	684	Open in IMG/M
3300010359\|Ga0126376_10197581	All Organisms → cellular organisms → Bacteria	1663	Open in IMG/M
3300010359\|Ga0126376_10997950	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300010359\|Ga0126376_11246529	Not Available	761	Open in IMG/M
3300010359\|Ga0126376_12026368	Not Available	618	Open in IMG/M
3300010360\|Ga0126372_11175130	Not Available	790	Open in IMG/M
3300010360\|Ga0126372_11239692	Not Available	772	Open in IMG/M
3300010360\|Ga0126372_11282783	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300010361\|Ga0126378_10874371	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300010362\|Ga0126377_10153002	All Organisms → cellular organisms → Bacteria	2169	Open in IMG/M
3300010362\|Ga0126377_10190671	All Organisms → cellular organisms → Bacteria	1957	Open in IMG/M
3300010362\|Ga0126377_10781140	All Organisms → cellular organisms → Bacteria	1012	Open in IMG/M
3300010362\|Ga0126377_12069814	Not Available	645	Open in IMG/M
3300010362\|Ga0126377_12118090	All Organisms → cellular organisms → Bacteria → Terrabacteria group	639	Open in IMG/M
3300010362\|Ga0126377_12530398	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300010366\|Ga0126379_12554720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	609	Open in IMG/M
3300010376\|Ga0126381_101115529	Not Available	1140	Open in IMG/M
3300010398\|Ga0126383_10343213	All Organisms → cellular organisms → Bacteria	1510	Open in IMG/M
3300010398\|Ga0126383_11616810	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	737	Open in IMG/M
3300010398\|Ga0126383_11974082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	671	Open in IMG/M
3300012199\|Ga0137383_10850101	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera	666	Open in IMG/M
3300012201\|Ga0137365_10113138	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2041	Open in IMG/M
3300012206\|Ga0137380_10423889	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1179	Open in IMG/M
3300012209\|Ga0137379_10364840	Not Available	1354	Open in IMG/M
3300012582\|Ga0137358_10089983	All Organisms → cellular organisms → Bacteria	2073	Open in IMG/M
3300012685\|Ga0137397_10255614	All Organisms → cellular organisms → Bacteria	1305	Open in IMG/M
3300012922\|Ga0137394_10055043	Not Available	3292	Open in IMG/M
3300012922\|Ga0137394_11056320	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300012925\|Ga0137419_11082571	Not Available	667	Open in IMG/M
3300012930\|Ga0137407_10714621	All Organisms → cellular organisms → Bacteria	944	Open in IMG/M
3300012930\|Ga0137407_12367927	Not Available	508	Open in IMG/M
3300012948\|Ga0126375_10116177	All Organisms → cellular organisms → Bacteria	1621	Open in IMG/M
3300012948\|Ga0126375_12105820	Not Available	501	Open in IMG/M
3300012971\|Ga0126369_11443147	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300012971\|Ga0126369_12174957	Not Available	642	Open in IMG/M
3300013306\|Ga0163162_10629622	All Organisms → cellular organisms → Bacteria	1197	Open in IMG/M
3300014271\|Ga0075326_1052223	All Organisms → cellular organisms → Bacteria	1088	Open in IMG/M
3300015264\|Ga0137403_10681035	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	889	Open in IMG/M
3300015371\|Ga0132258_13494608	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1077	Open in IMG/M
3300016357\|Ga0182032_10780464	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300016357\|Ga0182032_11857400	Not Available	527	Open in IMG/M
3300016371\|Ga0182034_10289016	Not Available	1309	Open in IMG/M
3300018465\|Ga0190269_10354427	All Organisms → cellular organisms → Bacteria	884	Open in IMG/M
3300018466\|Ga0190268_10523317	Not Available	813	Open in IMG/M
3300018482\|Ga0066669_12319946	All Organisms → cellular organisms → Bacteria → Terrabacteria group	512	Open in IMG/M
3300019789\|Ga0137408_1056785	Not Available	630	Open in IMG/M
3300020170\|Ga0179594_10326843	Not Available	581	Open in IMG/M
3300026035\|Ga0207703_10429336	Not Available	1231	Open in IMG/M
3300027056\|Ga0209879_1018665	All Organisms → cellular organisms → Bacteria	1148	Open in IMG/M
3300027527\|Ga0209684_1052783	All Organisms → cellular organisms → Bacteria → Terrabacteria group	627	Open in IMG/M
3300027577\|Ga0209874_1114455	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300027643\|Ga0209076_1188275	Not Available	569	Open in IMG/M
3300027647\|Ga0214468_1196269	Not Available	502	Open in IMG/M
3300027654\|Ga0209799_1017027	All Organisms → cellular organisms → Bacteria	1586	Open in IMG/M
3300027873\|Ga0209814_10009197	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	3870	Open in IMG/M
3300027873\|Ga0209814_10012319	All Organisms → cellular organisms → Bacteria	3379	Open in IMG/M
3300027880\|Ga0209481_10171296	All Organisms → cellular organisms → Bacteria	1078	Open in IMG/M
3300027880\|Ga0209481_10192475	Not Available	1018	Open in IMG/M
3300027907\|Ga0207428_10482532	Not Available	901	Open in IMG/M
3300027909\|Ga0209382_10180356	All Organisms → cellular organisms → Bacteria	2430	Open in IMG/M
3300027909\|Ga0209382_11028649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	856	Open in IMG/M
3300028536\|Ga0137415_10300878	All Organisms → cellular organisms → Bacteria	1408	Open in IMG/M
3300030619\|Ga0268386_10249050	All Organisms → cellular organisms → Bacteria	1308	Open in IMG/M
3300030619\|Ga0268386_10882038	Not Available	562	Open in IMG/M
3300031573\|Ga0310915_10215717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1344	Open in IMG/M
3300031740\|Ga0307468_101076315	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300031744\|Ga0306918_11036987	Not Available	636	Open in IMG/M
3300031852\|Ga0307410_10836852	All Organisms → cellular organisms → Bacteria → Proteobacteria	785	Open in IMG/M
3300031879\|Ga0306919_10362606	All Organisms → cellular organisms → Bacteria	1108	Open in IMG/M
3300031897\|Ga0318520_10597805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	686	Open in IMG/M
3300031903\|Ga0307407_10518881	Not Available	876	Open in IMG/M
3300032180\|Ga0307471_102327360	Not Available	676	Open in IMG/M
3300032205\|Ga0307472_100158001	All Organisms → cellular organisms → Bacteria	1667	Open in IMG/M
3300033289\|Ga0310914_10892802	All Organisms → cellular organisms → Bacteria → Terrabacteria group	788	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	73.72%
Host-Associated	Host-Associated	26.28%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.08%
Plants	Host-Associated → Plants	25.64%
Aquatic	Environmental → Aquatic	0.64%
Arthropoda	Host-Associated → Arthropoda	0.64%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.08%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.95%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.69%
Freshwater	Environmental → Aquatic → Freshwater	0.64%
Symbiotic Fungal Gardens And Galleries	Host-Associated → Arthropoda → Symbiotic Fungal Gardens And Galleries	0.64%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	17.95%
Loam	Environmental → Terrestrial → Soil → Loam	14.74%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.41%
Sand	Environmental → Terrestrial → Soil → Sand	2.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.28%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.64%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.64%
Fungus Garden	Host-Associated → Arthropoda → Symbiotic Fungal Gardens And Galleries → Fungus Garden	0.64%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	17.95%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.46%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.33%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.05%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.41%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	2.56%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.28%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.28%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.64%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.64%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.64%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.64%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.64%
Unclassified	Host-Associated → Arthropoda → Symbiotic Fungal Gardens And Galleries → Fungus Garden → Unclassified	0.64%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	21.79%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	16.03%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	13.46%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.41%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	4.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.56%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	2.56%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.92%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.92%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.28%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.28%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.64%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.64%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.64%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.64%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.64%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.64%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.64%
Fungus Garden	Host-Associated → Arthropoda → Symbiotic Fungal Gardens And Galleries → Fungus Garden → Unclassified → Fungus Garden	0.64%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.64%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.64%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2040502000	Fungus garden microbial communities from Atta colombica in Panama - dump bottom	Host-Associated	Open in IMG/M
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2162886007	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300003203	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009811	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30	Environmental	Open in IMG/M
3300009836	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014271	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D2	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027056	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027527	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027577	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027647	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38 HiSeq	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300030619	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ACODB_2866780	2040502000	Fungus Garden	MPRRVGRPKGDDSTVVNVRLPVSLVQRLDRYLDKLETETGLSTHRGMILRHALKMFLEAKGM
GPIPI_03522320	2088090014	Soil	MPRRVGRPKGEDSTVVNLRLSVSLLQRLDRYLDKLETETGLHTNRGMVLRHALKVFLEAKGM
SwRhRL2b_0061.00000570	2162886007	Switchgrass Rhizosphere	MKRRAGRPKGEAATVVNVRIPLSLVERLDRYLDKVETETGLTTNRGAILRHALKVFLESKQM
INPgaii200_09936382	2228664022	Soil	MPRRVGRPKGEDSTVVNLRLSVSLLQRLDRYLDKLETETGLHTNRGMVLRHALKVFLEA
ICChiseqgaiiDRAFT_05278341	3300000033	Soil	MPRRVGRPKGEDSTVVNLRLSVSLLQRLDRYLDKLETETGLHTNRGMVLRHALKVFLEAKGM*
INPhiseqgaiiFebDRAFT_1002681221	3300000364	Soil	MIRRVGRPKGEAAMVVNVRIPVSLVQRLDRYMDKLETETGLATNRGAILRHALKVFLESKKM*
JGI1027J12803_1022975162	3300000955	Soil	MPRRVGRPKGEDSTVVNLRLPVSLLQRLDRYLDKLETETGLHTNRGMILRHALKVFLEAQGM*
JGI10216J12902_1081590802	3300000956	Soil	MKRQVGRPKGEAATVVNVRIPLSLVERLDRYLDKVETDTGLTTNRGAILRHALKVFLESKKM*
JGI25382J43887_104601031	3300002908	Grasslands Soil	MKRQVGXPKGEEATVVNVRIPVSLVERLDRYLDKLETDTGLTTNRGAILRHALKVFLESKKM*
JGI25406J46586_100669982	3300003203	Tabebuia Heterophylla Rhizosphere	MKRRVGRPKGAVSTVINVRLPLHLVQRLDRSLDKLETETGIRTNRGAMLRQTLYVFLESKGM*
soilL2_102013851	3300003319	Sugarcane Root And Bulk Soil	MKRQAGRPKGEAATVVNVRIPVSLVERLDRYLDKVETETGLTTNRGAILRHALKVFLESKKM*
Ga0066396_100612001	3300004267	Tropical Forest Soil	MQRRAGRPKGEAATVVNVRIPLSLVERLDRYLDKVETETGLTTNRGAILRHALKVFLESKQM*
Ga0066398_101026881	3300004268	Tropical Forest Soil	MKRRAGRPKGEAATVVNVRISLSLVERLDRYLDKVETETGLTTNRGAILRHALKVFLESKQM*
Ga0066397_101290141	3300004281	Tropical Forest Soil	MQRRAGRPKGEAATVVNVRIPLSLVERLDRYLDKVETETGLTTNRGVILRHALKVFLESKQM*
Ga0063356_1001454021	3300004463	Arabidopsis Thaliana Rhizosphere	MKRQAGRPKGEAATVVNVRIPLSLVERLDRYLDKVEMETGLTTNRGAILRHALKVFLESKKM*
Ga0066395_102792831	3300004633	Tropical Forest Soil	MPRRVGRPQGEDSTVVNVRLPVSLVQRLDRYLDKLETETGLSTHRGMILRHALKLFLEAKGM*
Ga0066395_109964561	3300004633	Tropical Forest Soil	MKRRAGRPKGEAATVVNVRIPLSLVERLDRYLDKVETETGLTTNRGAILRHALKVFLESKQM*
Ga0066677_100839771	3300005171	Soil	MQRRVGRPKGETATVVNVRIPVSLVERLDRYMDKLETETGLATNRGAILRHALKVFLESKKM*
Ga0066680_103814931	3300005174	Soil	MKRQVGRPKGEAATVVNVRIPVSLVERLDHYLDKLETDTGLTTNRGAILRHALKVFLESKKM*
Ga0066678_105662581	3300005181	Soil	MQRRVGRPKGETATVVNVRIPVSLVERLDRYLDKLETDTGLTTNRGAILRHALKVFLESKKM*
Ga0065705_103208882	3300005294	Switchgrass Rhizosphere	MIPRMRRLAMKRRVGRPKGEAATVVNVRIPVSLVARLDRYMDKVETETGLMTNRGAILRHALKVFLASKKM*
Ga0066388_1022181222	3300005332	Tropical Forest Soil	MPRRVGRPKGEDSTVVNVRLPVSLVQRLDRYLDKLETETGLSTHRGMILRHALNMFLEAKGM*
Ga0066388_1023672952	3300005332	Tropical Forest Soil	MPGRVGRPKGEDSTVVNIRLPRSLVQRLARYLDKLETETGLHTNRGMILRHALKVFLEAKGM*
Ga0066388_1030882762	3300005332	Tropical Forest Soil	MPRHVGRPKGEDSTVVNIRLPLSLVQRLDRYLDKLETETGLPANRGMILRHALKVFLEAKGM*
Ga0066388_1059641201	3300005332	Tropical Forest Soil	MKRRVGRPKGEAAVVVNVRIPVSIVQRLDRYMDKLETETGLATHRGAILRHALKVFLESKKM*
Ga0066388_1065387791	3300005332	Tropical Forest Soil	MKRRVGRPKGEAAVVVNVRIPVSIVQRLDRYMDKLETETGLATNRGAILRHALKVFLESKKM*
Ga0066388_1070235251	3300005332	Tropical Forest Soil	MKRRAGRPTGEAATVVNVRIPLSLVERLYRYLDKVETETGLTTNRGAILRHALQVLLESKQM*
Ga0070686_1008537171	3300005544	Switchgrass Rhizosphere	MKRRAGRPKGEAATVVNVRIPLALVERLDRYLDKVETETGLMTNRGAILRHALKVFLESKKM*
Ga0066701_109597461	3300005552	Soil	MKRQVGWPKGEEATVVNVRIPVSLVERLDRYLDKLETDTGLTTNRGAILRHALKVFLESKKM*
Ga0066706_110196052	3300005598	Soil	MKRQVGRPKGEEATVVNVRIPVSLVERLDRYLDKVETDTGLTTNRGAILRHALKVFLESKKM*
Ga0066905_1000782752	3300005713	Tropical Forest Soil	MPRRVGRPKGEDSTVVNLRLPVSLVQRLDRYLDKLETETGLSTHRGMILRHALKIFLEAKGM*
Ga0066905_1002418961	3300005713	Tropical Forest Soil	PAMQRRAGRPKGEAATVVNVRIPLSLVERLDHYLDKVETETGLTTNRGAILRHALKVFLYMQRVTSHLF*
Ga0066905_1004920534	3300005713	Tropical Forest Soil	MQRPIGRPKGEAATVVNVRIPMSLVHRLDRYLDKLETETGLATNRGALIRHALKVFLEAKGI*
Ga0066903_1000837613	3300005764	Tropical Forest Soil	MPRRVGRPQGEDSTVVNVRLPVSLVQRLDRSLDKLETETGLSTHRGMILRHALKLFLEAKGM*
Ga0066903_1001945691	3300005764	Tropical Forest Soil	MPRRVGRPKGEASTVVNVRLPVSLVQRLDRYLDKLETETGLSTHRGMILRHALTVFLEAKRM*
Ga0066903_1037745391	3300005764	Tropical Forest Soil	MPRRVGRPKGEDSTVVNIRLPLSLIQRLDRYLDKLETETGLHTNRGMILRHALQVFLETKGM*
Ga0066903_1061344122	3300005764	Tropical Forest Soil	MPRRVGRPKGEDSTIVNVRLPLSLVQRLDRYLDKLEMETGLHTNRGMILRHALKVFLKTKNM*
Ga0066903_1065699331	3300005764	Tropical Forest Soil	MKRRAGRPTGEAATVVNVRIPLSLVERLDRYLDKVETETGLTTNRGAILRHALQVLLESKQM*
Ga0081455_101061373	3300005937	Tabebuia Heterophylla Rhizosphere	MPRRVGRPKGEDSTVVNVRLPVSLVQRLDRYLDKLETETGLSTHRGMIIRHALKIFLEAKGM*
Ga0081455_102339481	3300005937	Tabebuia Heterophylla Rhizosphere	MKRRAGRPKGEAATVVNVRIPLSLVERLDRYLDKVETETGLTTNRGAILRHALKVFLESKKL*
Ga0081455_105380171	3300005937	Tabebuia Heterophylla Rhizosphere	MPRRVGRPKGEASTVVNVRLPVSLVQRLDRYLDKLETETGLSTYRGMILRHALKVFLEAKGM*
Ga0081539_100089739	3300005985	Tabebuia Heterophylla Rhizosphere	RRVGRPTGADSTVVQVRLPVSLVQRLDRSLDKLETETGLSTHRGMIRRHAVKICLEAKGM
Ga0081539_100214053	3300005985	Tabebuia Heterophylla Rhizosphere	MKRRAGRPTGEAATVVNVRIPLSLVERLDRYLDKVETETGLTTNRGAILRHALKVFLESKQM*
Ga0081539_100761563	3300005985	Tabebuia Heterophylla Rhizosphere	MPRRVGRPKGEDSTVVQVRLPVSLVQRLDRSLDKLETETGLSTHRGMIRRH
Ga0075417_100192813	3300006049	Populus Rhizosphere	MPRRVGRPKGEDSTVVNLRLSVSLLQRLDRYLDKLETETGVHTNRGMVLRHA*
Ga0075417_101307683	3300006049	Populus Rhizosphere	MPRRVGRPKGEDSTVVNLRLPVSLLQRLDRYLDKLETETGVHTNRGMILRHALKVFLEAKGL*
Ga0075432_101209331	3300006058	Populus Rhizosphere	MPRRVGRPKGEDSTVVNLRLPVSLLQRLDRYLDKLETETGVHTNRGMVLRHA*
Ga0075428_1000657582	3300006844	Populus Rhizosphere	MPRRVGRPKGEVSTVVNIRLPVSLVQRLDRYLDKLETETGLSTHRGMILRHALKIFLEAKGM*
Ga0075428_1013963911	3300006844	Populus Rhizosphere	MQRRAGRPKGEAATVVNVRLPLSLVERLDRYLDKVETETGLTTNRGTILRHALKVFLESKQM*
Ga0075428_1014218322	3300006844	Populus Rhizosphere	MPRRVGRPKGEASTVVNVRLPVSLVQRLDRYLDKLETETGLSTHRGMILRHALKIFLEAKGM*
Ga0075428_1018411742	3300006844	Populus Rhizosphere	RPKGEDSTVVNLRLPVSLLQRLDRYLDKLETETGLHTNRGMILRHALKVFLEAKGM*
Ga0075421_1001667821	3300006845	Populus Rhizosphere	RVGRPKGEDSTVVNLRRPVSLLQRLDRYLDKLETETGLHTNRGMILRHALKVFLEAKGM*
Ga0075421_1004423872	3300006845	Populus Rhizosphere	MPRRVGRPKGEASTVVNVRLPVSLVQRLDRYLDKLETETGLATHRGMILRHALKIFLEAKGM*
Ga0075421_1016764581	3300006845	Populus Rhizosphere	MKRPVGRPKGEASTVMNVRLPLGLVHRLDRYLDRLETETGLQTNRGAILRHALKVFLESKGM*
Ga0075431_1011917821	3300006847	Populus Rhizosphere	MPRRVGRPKGEDSTVVNLRRPVSLLQRLDRYLDKLETETGLHTHRGMILRHALKVFLEAQGM*
Ga0075425_1008890771	3300006854	Populus Rhizosphere	MKRRVGRPKGEAATVVNVRIPVSLVERLDRYMDKVETDTGLTTNRGAILRHALKVFLESKKM*
Ga0075425_1029620561	3300006854	Populus Rhizosphere	FSMVSSIPAGFIGRNTAMPRRVGRPKGEASTVVNVRLPVSLVQRLDRYLDKLETETGLSTHRGMILRHALKIFLEAKGM*
Ga0075429_1002576561	3300006880	Populus Rhizosphere	MPRRVGRPKGEDSTVVNLRLPVSLLQRLDRYLDKLETETGLHTNRGMILRHA*
Ga0079215_102782141	3300006894	Agricultural Soil	MKHSVGRPKGEPATVVNVRIPVSLVGRLDRYLDKLETETGLATNRGALIRHALKVFLESKEM*
Ga0075435_1012173631	3300007076	Populus Rhizosphere	MKRQVGRPKGEEATVVNVRIPVSLVERLDRYMDKVETDTGLTTNRGAILRHALKVFLESKKM*
Ga0099793_100432692	3300007258	Vadose Zone Soil	MIQRVRRAAMKRQVGRPEGEEATVVNVRIPVSLVERLDRYLDKLETDTGLTTNRGAILRHALKVFLESKKM*
Ga0105245_131364301	3300009098	Miscanthus Rhizosphere	MKRRAGRPTGEAATVVNVRIPLSLVERLDRYLDKVETETGLTTNRGAILRHALKVFLESKKM*
Ga0066709_1010865481	3300009137	Grasslands Soil	MIQRVRRAAMKRQVGRPKGEEATVVNVRIPVSLVERLDRYLDKLETDTGLTTNRGAILRHALKVFLESKKM*
Ga0099792_110223801	3300009143	Vadose Zone Soil	MKRQVGRPKGEEATVVNVRIPVSLVERLDRYLDKLETDTGLTTNRGAILRHALKVFLESKKM*
Ga0105091_102002712	3300009146	Freshwater Sediment	MQRPIGRPKGEAATVVNVRIPLSLVHRLDRYLDKLETETGLATNRGALIRHALNVFLESKGK*
Ga0114129_101772603	3300009147	Populus Rhizosphere	MQRRAGRPKGEAATVVNVRLPLSLVERLDRYLDKVETETGLTTNRGAILRHALKVFLELKQM*
Ga0114129_103041631	3300009147	Populus Rhizosphere	AMPRRVGRPKGEDSTVVNLRLSVSLLQRLDRYLDKLETETGLHTNRGMVLRHALKVFLEAKGM*
Ga0111538_139041402	3300009156	Populus Rhizosphere	AGRPKGEAATVVNVRLPLSLVERLDRYLDKVETETGLTTNRGTILRHALKVFLESKQM*
Ga0126374_100932292	3300009792	Tropical Forest Soil	MKRRVGRPKGEAAVVVNVRIPVSIVQRLDRYMDKLETETGLATNRGAILRHALQVFLASKKM*
Ga0126374_117615582	3300009792	Tropical Forest Soil	MPGRVGRPKGEDSTVVNIRLPRSLVQRLDRYLDKLETETGLHTNRGMILRHALKVFL
Ga0105084_10892712	3300009811	Groundwater Sand	MRIASYTNEEPAMKRAIGRPKGEASTVINVRIPVTLMHRLDRYLDRLETATGLRTNRGAILRHALKVFLESKDI*
Ga0105068_10085412	3300009836	Groundwater Sand	MKRAIGRPKGEASTVINVRIPVTLMHRLDRYLDRLETATGLRTNRGAILRHALKVFLESKDI*
Ga0126315_105019721	3300010038	Serpentine Soil	MKRALGRPQGEASTVINVRMPVTLMHRLAPYRDRLETATGLRTNRGALLRHALKVFLESKDR*
Ga0126312_110389381	3300010041	Serpentine Soil	MKRALGRPQGEASTVINVRMPVTLMHRLAPYRDRLETATGLRTNRGALLRH
Ga0126380_111762891	3300010043	Tropical Forest Soil	MKRRAGRPKGEAATVVNVRIPLSLVERLDRYLDKVEMDTGLTTNRGAILRHALKVFLEPKKM*
Ga0126380_113399972	3300010043	Tropical Forest Soil	MAMKRRVGRPKGEAVVVVNVRIPVFIVQRLDRSMDKLETETGLATNRGAILRHALKVFLESKKM*
Ga0126384_112314641	3300010046	Tropical Forest Soil	MPRRVGRPKGADSTVVNVRLPVSLVQRLDRYLDKLETETGLSTHRGMIIRHALKMFLEAKGM*
Ga0126384_124130571	3300010046	Tropical Forest Soil	MKRRVGRPKGEAATVVNVRIPLSLVERLDRYLDKVETETGLTTNRGAILRYALKVFLESKKM*
Ga0126382_101737821	3300010047	Tropical Forest Soil	MKRRVGRPKGEAAVVVNVRIPVSLVQRLDRYMDKLETETGLATNRGAILRHALKVFLESKKM*
Ga0126382_101837792	3300010047	Tropical Forest Soil	MKRRAGRPKGEAATVGNVRIPLALVERLDRYLDKVETETGLTTNRGAILRHALKVFLESKKM*
Ga0126382_104492311	3300010047	Tropical Forest Soil	MPRRVGRPKGEDSTVVNVRLPVSLVQRLDRYLDKLETETGLSTHRGMILRHALKMFL
Ga0126382_113306181	3300010047	Tropical Forest Soil	MPRRVGRPKGEDSTVVHVRLPVSLVQRLDRYLDKLETETGLSTHRGMILRHALKMFL
Ga0126370_112903871	3300010358	Tropical Forest Soil	EDSTVVNVRLPVSLVQRLDRSLDKLETETGLSTHRGMILRHALKIFLEAQGM*
Ga0126376_101975811	3300010359	Tropical Forest Soil	MPGRVGRPKGEDSTVVNIRLPRSLVQRLDRYLDKLETETGLHTNRGMILRHALKVFLEAKGM*
Ga0126376_109979501	3300010359	Tropical Forest Soil	MPRRVGRPKGEDSTVVNVRLPVSLVQRLDRYLDKLETETGLSTHRGMILRHALKMFLEAKGM*
Ga0126376_112465292	3300010359	Tropical Forest Soil	MQRRAGRPKGEAATVVNVRIPLSLVERLDRYLDKVETETGLTTNRGAILRHALKVFLESKKL*
Ga0126376_120263681	3300010359	Tropical Forest Soil	CIASCTREEHAMPRAIGRPKGEASTVINVRIPVTLVHCPDRYLDRLETTTGLRTNRGALLRHALNVFLESKGV*
Ga0126372_111751301	3300010360	Tropical Forest Soil	MPRRVGRPKGEDSTVVNVRLPVSLVQRLDRYLDKLETETGLSTHRGMILRHALKLFLEAKGM*
Ga0126372_112396921	3300010360	Tropical Forest Soil	MKRRVGRPKGEAAVVVNVRIPVPIVQRLDRYMDKLETETGLATNRGAILRHALQVFLASKKM*
Ga0126372_112827832	3300010360	Tropical Forest Soil	MKRRAGRPKGEAATVVNVRIPLSLVERLDRYLDKVETDTGLTTNRGAILRHALKVFLES
Ga0126378_108743711	3300010361	Tropical Forest Soil	RRVGRPKGEDSTVVNVRLPVSLVQRLDRYLDKLETETGLSTHRGMILRHALKIFLEAQGM
Ga0126377_101530022	3300010362	Tropical Forest Soil	MPRAIGRPKGEASTVINVRSPVTPAHRLDRYLDRLETTTGLRTNRGALLRHALNVFLESKGV*
Ga0126377_101906712	3300010362	Tropical Forest Soil	MPRRVGRPKGEASTVVNVRLPVALVQRLDRYLDKLETETGLSPHRGMILRHALKVFLEAKGL*
Ga0126377_107811402	3300010362	Tropical Forest Soil	EDSTIVNVRLPLSLVQRLDRYLDKLEMETGLHTNRGMILRHALKVFLKTKNM*
Ga0126377_120698141	3300010362	Tropical Forest Soil	MQRRAGRPKGEAATVVNVRIPLSLVERLDHYLDKVETETGLTTNRGAILRHALKVFLESKQM*
Ga0126377_121180901	3300010362	Tropical Forest Soil	MKRRAGRPKGEAATVVNVRIPLSLVERLDRYLDKVEMDTGLTTNRGAILRHALKVFLESKKM*
Ga0126377_125303982	3300010362	Tropical Forest Soil	MPRRVGRPKGEDSTMVNLRLPVSLLQRLDRYLDKLETEPGLHTNRGMALRHVLKVFLKATGM*
Ga0126379_125547201	3300010366	Tropical Forest Soil	MQRRAGRPKGEAATVVNVRIPLSLVERLDRYLDKVETETGLTTNRGAILRHALKVFLE
Ga0126381_1011155291	3300010376	Tropical Forest Soil	MPRRVGRPKGEASTVVNVRLPVSLIQRLDRYLDKLETETGLSTHRGMILRHALTVFLEAKRM*
Ga0126383_103432132	3300010398	Tropical Forest Soil	MPRRVGRPKGEVSTVVNVRLPVSLVQRLDRYLDKLETETGLSTHRGMILRHALKIFLEAKGM*
Ga0126383_116168102	3300010398	Tropical Forest Soil	GRPKGEAATVVNVRIPLSLVERLDRYLDKVETETGLTTNRGAILRHALKVFLESKQM*
Ga0126383_119740822	3300010398	Tropical Forest Soil	MQRRAGRPKGEAATVVNVRIPLSLVERLDRYLDKVEIETGLTTNRGAILRHALKVFLESKQM*
Ga0137383_108501012	3300012199	Vadose Zone Soil	MKRRAGRPKGEAATVVNVRIPLSLVEWLDRYLDKVETETGLTTNRGAILRHALQVFLEPVTK*
Ga0137365_101131382	3300012201	Vadose Zone Soil	MSLERSMAMIRRVGRPKGEAAIVVNVRMPESLVERLDRYLDKLETETGLTTNRGAILRHALKVFLESKKM*
Ga0137380_104238891	3300012206	Vadose Zone Soil	MIQRVRRAAMKRQVGWPKGEEATVVNVRIPVSLVERLDRYLDKLETDTGLTTNRGAILRHALKVFLESKKM*
Ga0137379_103648401	3300012209	Vadose Zone Soil	MSLERSMAMTRRVGRPKGEAAIVVNVRMPESLVERLDRYLDKLETETGLTTNRGAILRHALKVFLESKKM*
Ga0137358_100899832	3300012582	Vadose Zone Soil	MQRRVGRPKGETATVVNVRIPVSLVERLDRYMDKLETETGLATHRGAILRHALKVFLESKKM*
Ga0137397_102556142	3300012685	Vadose Zone Soil	MPRRVGRPKGETATVVNVRIPVSLVERLDRYMDKLETETGLATNRGAILRHALKVFLESKKM*
Ga0137394_100550432	3300012922	Vadose Zone Soil	MKRAIGSPKGEASTVINVRMPVTLMHRLDRSLDRRETATGLRTNRGAILRHALKVFLESKDI*
Ga0137394_110563201	3300012922	Vadose Zone Soil	MQHPIGRPKGEAATVVNVRIPLSLVHRLDRYLDKLETETGLATNRGALIRHALNVFLESKGI*
Ga0137419_110825711	3300012925	Vadose Zone Soil	MKRQVGRPKGEEATVVNVRIPVSLVERLDRSLDKLETDTGLTTNRGAILRHALKVFLESKKM*
Ga0137407_107146212	3300012930	Vadose Zone Soil	MKRAIGTPTGEASTVINVRIPVPLMHRLDRDLDRLETATGLRTNRGAILRHALKVFLESKDI*
Ga0137407_123679271	3300012930	Vadose Zone Soil	TQTIFIVFLRIASCTNEEPAMKRAIGRPKGEASTVLNVRIPVTLMHRLDRYLDRLETATGLRTNRGAILRHALKVFLESKDR*
Ga0126375_101161772	3300012948	Tropical Forest Soil	MKRRAARPKGEAATVVNVRIPLSLVERLDRYLDKVETETGLTTNRGAILRHALKVFLESKKL*
Ga0126375_121058201	3300012948	Tropical Forest Soil	MQRRAGRPTGEAATVVNVRIPLSLVERLDRYLDKVETETGLTTNRGAILRHALKVFLESKQM*
Ga0126369_114431471	3300012971	Tropical Forest Soil	MPRRVGRPKGEDSTVVNIRLPRSLIQRLDRYLDKLETETGLHTNRGMILRHALQVFLETKGM*
Ga0126369_121749572	3300012971	Tropical Forest Soil	MPRRVGRPKGEDSTVVNLRLPVSLLQRLDRYLDKLETETGVHTNCGMILRHA*
Ga0163162_106296221	3300013306	Switchgrass Rhizosphere	ATVVNVRIPLALVERLDRYLDKGETETGLMTNRGAILRHALKVFLESKKM*
Ga0075326_10522232	3300014271	Natural And Restored Wetlands	MKRSVGRPKGEPATVVNVRIPVSLVERLNRYLDKLETETGLATNRGALIRHAVKVFLESKGM*
Ga0137403_106810353	3300015264	Vadose Zone Soil	EEPAMKRAIGTPTGEASTVINVRIPVPLMHRLDRDLDRLETATGLRTNRGAILRHALKVFLESKDI*
Ga0132258_134946082	3300015371	Arabidopsis Rhizosphere	MKRQAGRPKGEAATVVNVRIPVSLVERLDRYLDKVETDTGLTTNRGAILRHALKVFLESKKM*
Ga0182032_107804641	3300016357	Soil	RNAAMPRRVGRPKGEDSTVVNVRLPVSLVQRLDRYLDKLETETGLSTHRGMILRHALKLFLEAKGM
Ga0182032_118574002	3300016357	Soil	MKRRVGRPKGEAAVVVNVRIPVSIVQRLDRYRDKLETETGLATNRGAILRHALKVFLESKKM
Ga0182034_102890162	3300016371	Soil	MPRRVGRSKGADSTVVNVRLPVSLGQRLDRSLDKLETETGLSTHRGMILRHALKLFLEAKGM
Ga0190269_103544271	3300018465	Soil	MQHPIGRPKGEAATVVNVRIPMSLVHRLDRYLDKLETETGLATNRGALIRHALKVFLESKGI
Ga0190268_105233172	3300018466	Soil	MKRRAGRPKGEAATVVNVRIPLSLVERLDRYLDKVETETGLTTNRGAILRHALKVFLESKQL
Ga0066669_123199461	3300018482	Grasslands Soil	MKRQVGRPKGEEATVVNVRIPVSLVERLDRYLDKLETDTGLTTNRGAILRPALKVLLE
Ga0137408_10567851	3300019789	Vadose Zone Soil	MQRRVGRPKGETATVVNVRIPVSLVERLDRYMDKLETETGLATNRGAILRHALKVFLESKKM
Ga0179594_103268431	3300020170	Vadose Zone Soil	MRIASYTNEEPAMKRAIGRPKGEASTVINVRIPVTLMHRLDRYLDRLETATGLRTNRGAILRHALKVFLESKDI
Ga0207703_104293362	3300026035	Switchgrass Rhizosphere	MKRRAGRPKGEAATVVNVRIPLALVERLDRYLDKVETETGLMTNRGAILRHALKVFLESKKM
Ga0209879_10186652	3300027056	Groundwater Sand	MKRAIGRPKGEASTVINVRIPVTLMHRLDRYLDRLETATGLRTNRGAILRHALKVFLESKDI
Ga0209684_10527832	3300027527	Tropical Forest Soil	MQRRAGRPKGEAATVVNVRIPLSLVERLDRYLDKVETETGLTTNRGAILRHALKVFLESKQM
Ga0209874_11144551	3300027577	Groundwater Sand	MKRAVGRPKGEVSTGLNVRLPLALVHRLERYLDRLETETGLQTNRGAILRPALKVFLASKGM
Ga0209076_11882751	3300027643	Vadose Zone Soil	MKRQVGRPEGEEATVVNVRIPVSLVERLDRYMDKLETETGLATNRGAILRHALKVFLESKKM
Ga0214468_11962691	3300027647	Soil	MKRSVGRPKGEPATVVNVRIPVSLVERLNRYLDKLETETGLATNRGALIRHAVKVFLESKGM
Ga0209799_10170272	3300027654	Tropical Forest Soil	MKRRAGRPKGEAATVVNVRISLSLVERLDRYLDKVETETGLTTNRGAILRHALKVFLESKQM
Ga0209814_100091972	3300027873	Populus Rhizosphere	MPRRVGRPKGEDSTVVNLRLSVSLLQRLDRYLDKLETETGVHTNRGMVLRHA
Ga0209814_100123196	3300027873	Populus Rhizosphere	MPRRVGRPKGEDSTVVNLRLPVSLLQRLDRYLDKLETETGLHTNRGMILRHALKVFLEAKGM
Ga0209481_101712962	3300027880	Populus Rhizosphere	MPRRVGRPKGEDSTVVNLRRPVSLLQRLDRYLDKLETETGLHTHRGMILRHALKVFLEAQGM
Ga0209481_101924752	3300027880	Populus Rhizosphere	MPRRVGRPKGEDSTVVNLRLPVSLLQRLDRYLDKLETETGVHTNRGMILRHALKVFLEAKGL
Ga0207428_104825322	3300027907	Populus Rhizosphere	MPRRVGRPKGEDSTVVNLRLPVSLLQRLDRYLDKLETETGVHTNRGMILRHALKVFLEAK
Ga0209382_101803561	3300027909	Populus Rhizosphere	MPRRVGRPKGEASTVVNVRLPVSLVQRLDRYLDKLETETGLATHRGMILRHALKIFLEAKGM
Ga0209382_110286491	3300027909	Populus Rhizosphere	MQRRAGRPKGEAATVVNVRIPLSLVERLDRYLDKVETETGLTTNRGAILRHALKVFLESKKM
Ga0137415_103008781	3300028536	Vadose Zone Soil	MKRQVGRPEGEEATVVNVRIPVSLVERLDRYLDKLETDTGLTTNRGAILRHALKVFLESKKM
Ga0268386_102490504	3300030619	Soil	MKCSVGRPKGEPATVVNVRIPVSLVERLDRYLDKLETETGLATNRGALIRHAVKVFLESKEM
Ga0268386_108820382	3300030619	Soil	MKRSVGRPQGELATVMHGRIPESLVQRLDRYLDKLEAETGLATNRGAIIRHAVRVFLASKEM
Ga0310915_102157172	3300031573	Soil	MKRRVGRPTGEAATVVNVRIPLSLVERLDRYLDKVETETGLTTNRGAILRHALKVFLESKQM
Ga0307468_1010763152	3300031740	Hardwood Forest Soil	MQRPIGRPKGEAATVVNVRIPMSLVHRLDRYLDKLETETGLATNRGALIRHALKVFLESKGI
Ga0306918_110369872	3300031744	Soil	MQRRVGRPTGEAATVVNVRIPLSLVERLDRYLDKVETETGLTTNRGAILRHALKVFLESKQM
Ga0307410_108368522	3300031852	Rhizosphere	TGVDTTRNIFIVCMRIASCTTAEQAMTRALGRPTGEASTVINVRMPVTLMHRLAPDRDRLETATGLRTNRGALLRHALKVFLESKDR
Ga0306919_103626062	3300031879	Soil	MKRRVGRLTGEAATVVNVRIPLSLVERLDRYLDKVETETGLTTNRGAILRHALKVFLESKQM
Ga0318520_105978051	3300031897	Soil	MQRRVGRLTGEAATVVNVRIPLSLVERLDRYLDKVETETGLTTNRGAILRHALKVFLESKQM
Ga0307407_105188811	3300031903	Rhizosphere	LGRPKGEASTVINVRIPVTLMHRLDPYRDRLETATGLRTNRGALLRHALKVFLESKDR
Ga0307471_1023273602	3300032180	Hardwood Forest Soil	MKRRVGRPKGEAATVVNVRIPVSLVERLDRYLDKVETDTGLTTNRGAILRHALKVFLESKKM
Ga0307472_1001580013	3300032205	Hardwood Forest Soil	MQRPIGRPKGEAATVVNVRIPMSLVHRLDRYLDKLETETGLATNRGALIRHALKVFLES
Ga0310914_108928021	3300033289	Soil	MKRRVGRLTGEAATVVNVRIPLSLVERLDRYLDKVETETGLTTNRGAILRHALKVFLESKKM

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F043703

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences