Metagenome Family F043592

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F043592
Family Type	Metagenome
Number of Sequences	156
Average Sequence Length	55 residues
Representative Sequence	AGLSSLTPDGVRLAREWDLCSLYARRDRRWYLKVRTNARPEGAAVSHSESGAAVR
Number of Associated Samples	104
Number of Associated Scaffolds	156

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	99.36 %
% of genes from short scaffolds (< 2000 bps)	89.74 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (64.744 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (52.564 % of family members)
Environment Ontology (ENVO)	Unclassified (55.128 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (53.846 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 30.91% Coil/Unstructured: 69.09%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 156 Family Scaffolds
PF06035	Peptidase_C93	5.13
PF01546	Peptidase_M20	3.21
PF03118	RNA_pol_A_CTD	2.56
PF04326	AlbA_2	1.28
PF13289	SIR2_2	1.28
PF13378	MR_MLE_C	1.28
PF13649	Methyltransf_25	1.28
PF09509	Hypoth_Ymh	0.64
PF01048	PNP_UDP_1	0.64
PF14295	PAN_4	0.64
PF13751	DDE_Tnp_1_6	0.64
PF02735	Ku	0.64
PF02826	2-Hacid_dh_C	0.64
PF03795	YCII	0.64
PF01551	Peptidase_M23	0.64
PF00239	Resolvase	0.64
PF00313	CSD	0.64
PF00589	Phage_integrase	0.64

COG ID	Name	Functional Category	% Frequency in 156 Family Scaffolds
COG3672	Predicted transglutaminase-like protein	Posttranslational modification, protein turnover, chaperones [O]	5.13
COG0202	DNA-directed RNA polymerase, alpha subunit/40 kD subunit	Transcription [K]	2.56
COG2865	Predicted transcriptional regulator, contains HTH domain	Transcription [K]	1.28
COG0775	Nucleoside phosphorylase/nucleosidase, includes 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase MtnN and futalosine hydrolase MqnB	Nucleotide transport and metabolism [F]	0.64
COG0813	Purine-nucleoside phosphorylase	Nucleotide transport and metabolism [F]	0.64
COG1273	Non-homologous end joining protein Ku, dsDNA break repair	Replication, recombination and repair [L]	0.64
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.64
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.64
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.64
COG2820	Uridine phosphorylase	Nucleotide transport and metabolism [F]	0.64

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	64.74 %
Unclassified	root	N/A	35.26 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	64.74 %
Unclassified	root	N/A	35.26 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	64.74 %
Unclassified	root	N/A	35.26 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	53.21 %
Unclassified	root	N/A	35.26 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	48.72 %
Unclassified	root	N/A	35.26 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	41.67 %
Unclassified	root	N/A	35.26 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	1.92 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.28 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	37.18 %
Unclassified	root	N/A	35.26 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	1.92 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.28 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.64 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.26 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	33.33 %
Muriiphilus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Muriiphilus	1.92 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.28 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.64 %
Methylocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.26 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	8.33 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	2.56 %
Muriiphilus fusiformis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Muriiphilus → Muriiphilus fusiformis	1.92 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	1.92 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.28 %
Methylocystis rosea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis rosea	0.64 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.64 %
Bradyrhizobium diazoefficiens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	0.64 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.26 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	8.33 %
Muriiphilus fusiformis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Muriiphilus → Muriiphilus fusiformis	1.92 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	1.92 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1.28 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.28 %
Bradyrhizobium sp. BTAi1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. BTAi1	0.64 %
Bradyrhizobium sp. LVM 105	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. LVM 105	0.64 %
Methylocystis rosea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis rosea	0.64 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.64 %
Bradyrhizobium diazoefficiens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	0.64 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.64 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908043\|A2_c1_ConsensusfromContig33194	All Organisms → cellular organisms → Bacteria → Proteobacteria	1113	Open in IMG/M
2140918007\|ConsensusfromContig130571	All Organisms → cellular organisms → Bacteria → Proteobacteria	1150	Open in IMG/M
3300001661\|JGI12053J15887_10077711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1832	Open in IMG/M
3300002245\|JGIcombinedJ26739_101572093	Not Available	554	Open in IMG/M
3300005445\|Ga0070708_100518775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1124	Open in IMG/M
3300005471\|Ga0070698_100866093	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	848	Open in IMG/M
3300005950\|Ga0066787_10029896	All Organisms → cellular organisms → Bacteria	979	Open in IMG/M
3300005952\|Ga0080026_10152732	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300005993\|Ga0080027_10484003	Not Available	502	Open in IMG/M
3300005994\|Ga0066789_10008962	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	4432	Open in IMG/M
3300005994\|Ga0066789_10072311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1494	Open in IMG/M
3300005994\|Ga0066789_10081709	All Organisms → cellular organisms → Bacteria → Proteobacteria	1396	Open in IMG/M
3300005994\|Ga0066789_10082009	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	1393	Open in IMG/M
3300005994\|Ga0066789_10493015	Not Available	511	Open in IMG/M
3300005995\|Ga0066790_10048138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1846	Open in IMG/M
3300005995\|Ga0066790_10395424	Not Available	591	Open in IMG/M
3300006047\|Ga0075024_100043827	All Organisms → cellular organisms → Bacteria	1854	Open in IMG/M
3300006050\|Ga0075028_100048742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2027	Open in IMG/M
3300006050\|Ga0075028_100326148	All Organisms → cellular organisms → Bacteria	862	Open in IMG/M
3300006050\|Ga0075028_100793685	Not Available	576	Open in IMG/M
3300006172\|Ga0075018_10063441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Muriiphilus → Muriiphilus fusiformis	1567	Open in IMG/M
3300006172\|Ga0075018_10676836	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300007255\|Ga0099791_10197999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	946	Open in IMG/M
3300007258\|Ga0099793_10039672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2039	Open in IMG/M
3300007265\|Ga0099794_10559425	Not Available	604	Open in IMG/M
3300007788\|Ga0099795_10059695	Not Available	1412	Open in IMG/M
3300007788\|Ga0099795_10098620	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1143	Open in IMG/M
3300009038\|Ga0099829_11116639	Not Available	653	Open in IMG/M
3300009038\|Ga0099829_11438937	Not Available	569	Open in IMG/M
3300009143\|Ga0099792_10171132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1214	Open in IMG/M
3300009662\|Ga0105856_1225614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	600	Open in IMG/M
3300010159\|Ga0099796_10002124	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4260	Open in IMG/M
3300011269\|Ga0137392_10245810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1472	Open in IMG/M
3300011269\|Ga0137392_10378648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. BTAi1	1174	Open in IMG/M
3300011269\|Ga0137392_10659352	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	867	Open in IMG/M
3300011269\|Ga0137392_11369439	Not Available	567	Open in IMG/M
3300011270\|Ga0137391_10029256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	4610	Open in IMG/M
3300011270\|Ga0137391_10173488	All Organisms → cellular organisms → Bacteria → Proteobacteria	1879	Open in IMG/M
3300011270\|Ga0137391_10601468	Not Available	922	Open in IMG/M
3300011270\|Ga0137391_10908032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	720	Open in IMG/M
3300011270\|Ga0137391_11250543	Not Available	590	Open in IMG/M
3300011271\|Ga0137393_10441537	Not Available	1115	Open in IMG/M
3300011271\|Ga0137393_11091048	Not Available	678	Open in IMG/M
3300011271\|Ga0137393_11354908	Not Available	601	Open in IMG/M
3300012096\|Ga0137389_10007412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7150	Open in IMG/M
3300012096\|Ga0137389_10123340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2090	Open in IMG/M
3300012096\|Ga0137389_11600924	Not Available	547	Open in IMG/M
3300012200\|Ga0137382_10859523	Not Available	654	Open in IMG/M
3300012202\|Ga0137363_10068024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2612	Open in IMG/M
3300012202\|Ga0137363_10839874	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	779	Open in IMG/M
3300012202\|Ga0137363_10948677	Not Available	730	Open in IMG/M
3300012203\|Ga0137399_11175445	Not Available	646	Open in IMG/M
3300012207\|Ga0137381_10042154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3738	Open in IMG/M
3300012207\|Ga0137381_10053505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	3339	Open in IMG/M
3300012207\|Ga0137381_10246476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1552	Open in IMG/M
3300012207\|Ga0137381_11520088	Not Available	561	Open in IMG/M
3300012207\|Ga0137381_11544918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	555	Open in IMG/M
3300012209\|Ga0137379_10338368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1415	Open in IMG/M
3300012209\|Ga0137379_10340308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1410	Open in IMG/M
3300012209\|Ga0137379_10903049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	788	Open in IMG/M
3300012351\|Ga0137386_10231494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1328	Open in IMG/M
3300012356\|Ga0137371_10729281	Not Available	757	Open in IMG/M
3300012357\|Ga0137384_11404491	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. LVM 105	546	Open in IMG/M
3300012359\|Ga0137385_10179262	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1856	Open in IMG/M
3300012359\|Ga0137385_10566367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	957	Open in IMG/M
3300012361\|Ga0137360_10680145	Not Available	883	Open in IMG/M
3300012363\|Ga0137390_10471155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1231	Open in IMG/M
3300012683\|Ga0137398_10827318	Not Available	647	Open in IMG/M
3300012685\|Ga0137397_10511093	Not Available	895	Open in IMG/M
3300012685\|Ga0137397_10802917	Not Available	698	Open in IMG/M
3300012685\|Ga0137397_11142195	Not Available	565	Open in IMG/M
3300012918\|Ga0137396_10195872	Not Available	1485	Open in IMG/M
3300012922\|Ga0137394_10927790	Not Available	726	Open in IMG/M
3300012922\|Ga0137394_11127137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	649	Open in IMG/M
3300012924\|Ga0137413_10185894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1386	Open in IMG/M
3300012924\|Ga0137413_10602365	Not Available	822	Open in IMG/M
3300012924\|Ga0137413_11521788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	544	Open in IMG/M
3300012925\|Ga0137419_10260243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	1311	Open in IMG/M
3300012925\|Ga0137419_10344937	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1150	Open in IMG/M
3300012925\|Ga0137419_11781714	Not Available	527	Open in IMG/M
3300012925\|Ga0137419_11968933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	502	Open in IMG/M
3300012927\|Ga0137416_10053442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	2846	Open in IMG/M
3300012930\|Ga0137407_10257033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1585	Open in IMG/M
3300012930\|Ga0137407_10347896	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1364	Open in IMG/M
3300012930\|Ga0137407_10522751	Not Available	1110	Open in IMG/M
3300012930\|Ga0137407_11152634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	735	Open in IMG/M
3300012930\|Ga0137407_12285051	Not Available	517	Open in IMG/M
3300012941\|Ga0162652_100082545	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300012944\|Ga0137410_10304208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1263	Open in IMG/M
3300012944\|Ga0137410_11402037	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	607	Open in IMG/M
3300015053\|Ga0137405_1099163	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1321	Open in IMG/M
3300015080\|Ga0167639_1012732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1209	Open in IMG/M
3300015193\|Ga0167668_1033606	Not Available	1122	Open in IMG/M
3300015245\|Ga0137409_10528903	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1004	Open in IMG/M
3300015264\|Ga0137403_10115831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2676	Open in IMG/M
3300015264\|Ga0137403_11093052	Not Available	643	Open in IMG/M
3300018052\|Ga0184638_1176728	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300018061\|Ga0184619_10459049	Not Available	567	Open in IMG/M
3300018066\|Ga0184617_1067782	Not Available	944	Open in IMG/M
3300018072\|Ga0184635_10187619	All Organisms → cellular organisms → Bacteria	825	Open in IMG/M
3300018072\|Ga0184635_10357706	Not Available	559	Open in IMG/M
3300018075\|Ga0184632_10061904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Muriiphilus → Muriiphilus fusiformis	1623	Open in IMG/M
3300018075\|Ga0184632_10121789	All Organisms → cellular organisms → Bacteria	1148	Open in IMG/M
3300018075\|Ga0184632_10172953	All Organisms → cellular organisms → Bacteria	953	Open in IMG/M
3300019789\|Ga0137408_1102213	Not Available	1085	Open in IMG/M
3300019869\|Ga0193705_1051709	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300019873\|Ga0193700_1054779	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300019877\|Ga0193722_1024993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1544	Open in IMG/M
3300019885\|Ga0193747_1090387	Not Available	748	Open in IMG/M
3300019886\|Ga0193727_1197354	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	505	Open in IMG/M
3300019999\|Ga0193718_1101652	Not Available	588	Open in IMG/M
3300020004\|Ga0193755_1068114	Not Available	1151	Open in IMG/M
3300020015\|Ga0193734_1090134	Not Available	517	Open in IMG/M
3300020062\|Ga0193724_1080296	Not Available	677	Open in IMG/M
3300021086\|Ga0179596_10104961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1290	Open in IMG/M
3300021086\|Ga0179596_10500223	Not Available	616	Open in IMG/M
3300021411\|Ga0193709_1084469	Not Available	702	Open in IMG/M
3300022756\|Ga0222622_10635433	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300026214\|Ga0209838_1058914	Not Available	572	Open in IMG/M
3300026291\|Ga0209890_10007962	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4400	Open in IMG/M
3300026291\|Ga0209890_10058024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1413	Open in IMG/M
3300026291\|Ga0209890_10060990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	1370	Open in IMG/M
3300026319\|Ga0209647_1236199	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300026351\|Ga0257170_1014515	Not Available	1001	Open in IMG/M
3300026371\|Ga0257179_1007279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1086	Open in IMG/M
3300026481\|Ga0257155_1005761	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1551	Open in IMG/M
3300026482\|Ga0257172_1055954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	722	Open in IMG/M
3300026489\|Ga0257160_1075962	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300026507\|Ga0257165_1070137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	640	Open in IMG/M
3300026508\|Ga0257161_1097409	All Organisms → cellular organisms → Bacteria → Proteobacteria	612	Open in IMG/M
3300026515\|Ga0257158_1109590	Not Available	549	Open in IMG/M
3300026557\|Ga0179587_10469465	Not Available	824	Open in IMG/M
3300027383\|Ga0209213_1009987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1711	Open in IMG/M
3300027616\|Ga0209106_1031276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1175	Open in IMG/M
3300027633\|Ga0208988_1160401	Not Available	537	Open in IMG/M
3300027655\|Ga0209388_1138628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	690	Open in IMG/M
3300027663\|Ga0208990_1030741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1704	Open in IMG/M
3300027671\|Ga0209588_1142041	Not Available	763	Open in IMG/M
3300027678\|Ga0209011_1083922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	940	Open in IMG/M
3300027681\|Ga0208991_1033104	All Organisms → cellular organisms → Bacteria → Proteobacteria	1566	Open in IMG/M
3300027846\|Ga0209180_10415684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis rosea	761	Open in IMG/M
3300027862\|Ga0209701_10004767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	8920	Open in IMG/M
3300027875\|Ga0209283_10405118	All Organisms → cellular organisms → Bacteria	889	Open in IMG/M
3300027894\|Ga0209068_10587072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	648	Open in IMG/M
3300027903\|Ga0209488_10172873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1632	Open in IMG/M
3300027903\|Ga0209488_10753904	Not Available	694	Open in IMG/M
3300027915\|Ga0209069_10040494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Muriiphilus → Muriiphilus fusiformis	2182	Open in IMG/M
3300028047\|Ga0209526_10757000	Not Available	606	Open in IMG/M
3300028047\|Ga0209526_10997759	Not Available	501	Open in IMG/M
3300028536\|Ga0137415_10086958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	2982	Open in IMG/M
3300028807\|Ga0307305_10241252	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300028814\|Ga0307302_10068196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1672	Open in IMG/M
3300028819\|Ga0307296_10074457	All Organisms → cellular organisms → Bacteria → Proteobacteria	1806	Open in IMG/M
3300028828\|Ga0307312_10362407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	949	Open in IMG/M
3300028881\|Ga0307277_10277480	All Organisms → cellular organisms → Bacteria	742	Open in IMG/M
3300034965\|Ga0370497_0091419	Not Available	716	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.10%
Aquatic	Environmental → Aquatic	10.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.46%
Sediment	Environmental → Aquatic → Sediment	10.90%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.64%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.51%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	10.90%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.26%
Loam	Environmental → Terrestrial → Soil → Loam	7.69%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.64%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	63.46%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	10.90%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	9.62%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.41%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.13%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.28%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.28%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.64%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.64%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.64%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	52.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.62%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	7.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.41%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.13%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	5.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.13%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.28%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	1.28%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	1.28%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.28%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.64%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.64%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.64%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.64%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.64%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908043	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active Layer A2	Environmental	Open in IMG/M
2140918007	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active_all	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005950	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047	Environmental	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009662	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-060	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012941	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015080	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G6C, Proglacial plain, adjacent to northern proglacial tributary)	Environmental	Open in IMG/M
3300015193	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb6, proglacial stream)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300019873	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s1	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300019999	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a1	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020015	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m1	Environmental	Open in IMG/M
3300020062	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021411	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3c2	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300026214	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047 (SPAdes)	Environmental	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026351	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-05-B	Environmental	Open in IMG/M
3300026371	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-B	Environmental	Open in IMG/M
3300026481	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-A	Environmental	Open in IMG/M
3300026482	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-B	Environmental	Open in IMG/M
3300026489	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-A	Environmental	Open in IMG/M
3300026507	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-B	Environmental	Open in IMG/M
3300026508	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-A	Environmental	Open in IMG/M
3300026515	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-A	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027383	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M2 (SPAdes)	Environmental	Open in IMG/M
3300027616	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027633	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027663	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300034965	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_04D_17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
A2_c1_00140490	2124908043	Soil	SLTPDGARLAREWDLCSLYARRDRRWYLKVRANAHPEGAAVSQSESGAAVR
A_all_C_01860680	2140918007	Soil	DGVRLAREWDLCSLYARRDRRWYLKVRTNPRPEGAAVSHSESGAAVR
JGI12053J15887_100777111	3300001661	Forest Soil	AFHEAGLSSLTPDGVRVAREWDLCSLYARRDRRWYLKVRTNMRPEGAAVSHSKSGTAVR*
JGIcombinedJ26739_1015720931	3300002245	Forest Soil	LTPDGARLAREWDLCSLYARRDRRWYLKVRANTRPEGAAVSHSESGAAVR*
Ga0070708_1005187751	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	REWDLCSLYARRDRRWYLKVRTNARAEGAAISHSESGAAVR*
Ga0070698_1008660931	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	AGLSSLTPDGVRLAREWDLCSLYARRDRRWYLKVRTNPRPEGAAVSHSESGAAAR*
Ga0066787_100298962	3300005950	Soil	LAREWDLCSLYARRDRRWYLKVRTNPRPEGAAVNHSESGAAVR*
Ga0080026_101527321	3300005952	Permafrost Soil	DGVRLAREWDLCSLYARRDRRWYLKVRTNTRPEGVAVSHSESGAAVR*
Ga0080027_104840032	3300005993	Prmafrost Soil	SLTPDGVRLAREWDLCSLYARRDRRWYLKVRTNTRLGGAAVSHSASGAVR*
Ga0066789_100089621	3300005994	Soil	SSLTPDGVRLAREWDLCSLYARRDRRWYLKVRTNARAGGAAVSHSESGAANR*
Ga0066789_100723115	3300005994	Soil	SAGLAFHEAGLSSLTPDGARLAREWDLCSLYARRDRRWYLKVRVNARPAGAAVGHSESGAAVR*
Ga0066789_100817091	3300005994	Soil	SSLTPDGARLAREWDLCSLYARRDRRWYLKVRTNTRPEGAAVSHSESGAAVR*
Ga0066789_100820091	3300005994	Soil	VRLAREWDLCSLYARRDRRWYLKVRTNPRPEGAAVNHSESGAAVR*
Ga0066789_104930152	3300005994	Soil	LVSAGLAFHEAGLSSLTPDGVRLAREWDLCSLYARRDRRWYLKVRTNTRPEGAAVGHSESGTAVQ*
Ga0066790_100481381	3300005995	Soil	AFHEAGLSSLTPDGVRLAREWDLCSLYARRDRRWYLKVRTNTRPEGAAVSHSVSGAVR*
Ga0066790_103954243	3300005995	Soil	TPDGARLAREWDLCSLYARRDRRWYLKVRVNARPAGAAVGHSESGAAVR*
Ga0075024_1000438271	3300006047	Watersheds	VSAGLAFHEAGLSSLTPDGERLAMEWDLCSLYARRDRRWYWKVRTSARPEGAAVSHPESSAAVR*
Ga0075028_1000487423	3300006050	Watersheds	LAFHEAGLSSLTPDGVRLAREWDLCSLYARRDRRWYLKVRAIARPQGAAVSHSESGAAVR
Ga0075028_1003261481	3300006050	Watersheds	HEAGLSSLTPDGVRMAKEWDLCSLYARRDRRWYLKVRANARPEGAAVNHSESGAAVR*
Ga0075028_1007936851	3300006050	Watersheds	EWDLCSLYARRDRRWYLKVRTIARPQGAAVSDSESGAAVR*
Ga0075018_100634413	3300006172	Watersheds	SAGLAFHEAGLSSLTPDGVRLAREWDLCSLYARRDRRWYLKVRAIARPQGAAVSHSESGAAVR*
Ga0075018_106768362	3300006172	Watersheds	SAGLAFHEAGLSSLTPDGEHLAREWDLCSLYARRDRRWHLKVRTIARPQGAAVSHSESGAAVR*
Ga0099791_101979993	3300007255	Vadose Zone Soil	LAFHEAGLSSLTPDGVRLAREWDLCSLYARRDRRWYLKVRTNMRPEGAAVSHSESGAAVR
Ga0099793_100396721	3300007258	Vadose Zone Soil	SLTPDGVRLAREWDLCSLYARRDRRWYSKVRANARTEGAAVSHSESGAAVR*
Ga0099794_105594252	3300007265	Vadose Zone Soil	LSSLTPDGVRLAREWDLCSLYARRDRRWYLKVRTSARPEGAAVGHSESGAAVR*
Ga0099795_100596951	3300007788	Vadose Zone Soil	PDGVRMAREWDLCSLYARRDRRWYLKVRTNTRPEGAAVNHSESGAAVR*
Ga0099795_100986201	3300007788	Vadose Zone Soil	GVRMAREWDLCSLYARRDRRWYLKVRINTCPEGAAVSHSESGAAVR*
Ga0099829_111166391	3300009038	Vadose Zone Soil	LTPDGVRLAREWDLCSLYARRDRRWYLKVRANPRPEGAAVSHSESGAAVR*
Ga0099829_114389371	3300009038	Vadose Zone Soil	CDLVSAGLAFHEAGLSSLTPDGVRLAREWDLCSLYARRDRRWYLKVRTNPRPEGAAVSHSESGAAVR*
Ga0099792_101711322	3300009143	Vadose Zone Soil	AGLSSLTPDGVRVAREWDLCSLYARRDRRWYLKVRTNMRPEGAAVSHSKSGTAVR*
Ga0105856_12256141	3300009662	Permafrost Soil	AGLSSLTPDGVRLAREWDPCSLYARRDRRWYLKVGTNTRPEGAAVSHSESGAAVR*
Ga0099796_100021241	3300010159	Vadose Zone Soil	SLSSLTPDGERLAMEWDLCSLYARRDRRWYLKVRANARPEGAGVSHSESGAAVR*
Ga0137392_102458103	3300011269	Vadose Zone Soil	AFHEAGLSSLTPDGVRLAREWDLCSLYARRDRRWYLKVRTNTRPEGAAVSHSESGAAVR*
Ga0137392_103786481	3300011269	Vadose Zone Soil	VRLAREWDLCSLYARRDRRWYLKVRTNPRPEGAAVSHSESGAAVR*
Ga0137392_106593523	3300011269	Vadose Zone Soil	ARLAREWDLCSLYARRDRRWYWKVRTNPRPEGAAVSHSESGAAVR*
Ga0137392_113694392	3300011269	Vadose Zone Soil	VSAGLAFHEAGLSSLTPDGVRLAREWDLCSLYARRDRRWYFKVRTNTRPEGAAVSHSASGAAVR*
Ga0137391_100292561	3300011270	Vadose Zone Soil	HEAGLSSLTPDGVRLAREWDLCSLYARRDRRWYLKVRTNPRPEGAAVSHSESGAAVR*
Ga0137391_101734884	3300011270	Vadose Zone Soil	VSAGLAFHEAGLSSLTPDGARLAREWDLCSLYARRDRRWYWKVRTNPRPEGAAVSHSESGAAVR*
Ga0137391_106014682	3300011270	Vadose Zone Soil	VSAGLAFHEAGLSSLTPDGARLAREWDLCSLYARRDRRWYLKVRTNARPEGAAVSHSESGAAVR*
Ga0137391_109080323	3300011270	Vadose Zone Soil	VSAGLAFHEAGLSSLTPDGARLAREWDPCSLYARRDRRWYWKVRTNARSEGAAVSHSESGAAVR*
Ga0137391_112505431	3300011270	Vadose Zone Soil	DLVSAGLAFHEAGLSSLTPDGVRLAREWDPCSLYARRDRRWYLKVRTNARPEGVAVSHSESGAAVR*
Ga0137393_104415372	3300011271	Vadose Zone Soil	AFHEAGLSSLTPDGVRMAREWDLCSLYARRDRRWYLKVRTNARPEGAAVSHSESGAAVR*
Ga0137393_110910481	3300011271	Vadose Zone Soil	LAFHEAGLSSLTPDGVRLAREWDLCSLYARRDRRWYFKVRTNTRPEGAAVSHSASGAAVR
Ga0137393_113549082	3300011271	Vadose Zone Soil	AFHEAGLSSLTPDGVRMAREWDLCSLYARRDRRWYLKVRTNTRPEGAAVSHSESGAAVR*
Ga0137389_1000741214	3300012096	Vadose Zone Soil	LSSLTPDGVRLAREWDLCSLYARRDRRWYLKVRTNMRPEGAAVSHSKSGTAVR*
Ga0137389_101233405	3300012096	Vadose Zone Soil	TPDGVRLAREWDLCSLYARRDRRWYLKVRTNARPEGAAVSHSESGAAVR*
Ga0137389_116009242	3300012096	Vadose Zone Soil	LVSAGLAFHEAGLSSLTPDGVRLAREWDPCSLYARRDRRWYLKVRTNPRPEGAAVSHAESGAAVR*
Ga0137382_108595231	3300012200	Vadose Zone Soil	HEAGLSSLTPDGERLAMEWDLCSLYARRDRRWYLKVRANARPEGAGVSHSESGAAVR*
Ga0137363_100680241	3300012202	Vadose Zone Soil	LSSLTPDGVRLAREWDPCSLYARRDRRWYLKVRTNARSEGAAVSHSESGAAVR*
Ga0137363_108398741	3300012202	Vadose Zone Soil	DGERLAREWDLCSLYARRDRRWYLKVRAIACPEGAAVSHSESGAAVR*
Ga0137363_109486771	3300012202	Vadose Zone Soil	RLAMEWDLCSLYARRDRRWYLKVRSIACPQGAAVSHSESGAAVR*
Ga0137399_111754451	3300012203	Vadose Zone Soil	AFHEAGLSSLTPDGVRMAREWDLCSLYARRDRRWYLKVRTNTRPEAAAVSHSESGAAVR*
Ga0137381_100421544	3300012207	Vadose Zone Soil	EAGLSSLTPDGVRLAREWDLCSLYARRDRRWYLKVRTDARPEGAAVSRSESRAAVR*
Ga0137381_100535058	3300012207	Vadose Zone Soil	EAGLSSLTPDGVRLAREWDLCSLYARRDRRWYLKVRTDARPQGAAVSHSESGAAVR*
Ga0137381_102464764	3300012207	Vadose Zone Soil	SLTPDGARLAMEWDLCSLYARRDRRWYLKVQANARAEGAAVSYSESGAAVR*
Ga0137381_115200881	3300012207	Vadose Zone Soil	HEAGLSSLTPDGVRLAREWDLCSLYARRDRRWYLKVRTDARAEGAAVSHSESGAAVR*
Ga0137381_115449182	3300012207	Vadose Zone Soil	GERLAMEWDLCSLYARRDRRWYLKVRVNARPEGAAVSHSESSAAVR*
Ga0137379_103383683	3300012209	Vadose Zone Soil	LAFHEAGLSSLTPDGVRLAREWDLCSLYARRDRRWYLKVRTDARPQGAAVSHSESGAAVR
Ga0137379_103403083	3300012209	Vadose Zone Soil	LAFHEAGLSSLTPDGVRLAREWDLCSLYARRDRRWYLKVRTNARPEGAAVSHSESGAAVR
Ga0137379_109030494	3300012209	Vadose Zone Soil	VRLAREWDLCSLYARRDRRWYLKVQTNARPEGAADSHSESGVAVR*
Ga0137386_102314943	3300012351	Vadose Zone Soil	SSLTPDGVRLAREWDLCSLYARRDRRWYLKVRTDARPEGAAVSRSESRAAVR*
Ga0137371_107292813	3300012356	Vadose Zone Soil	AMEWDLCSLYARRDRRWYLKARANARPEGAAISHSESGAAVR*
Ga0137384_114044912	3300012357	Vadose Zone Soil	LSSLTPDGVRLAREWDLCSLYARRDRRWYLKVRTDARPEGAAVSRSESRAAVR*
Ga0137385_101792621	3300012359	Vadose Zone Soil	GLSSLTPDGVRLAREWDLCSLYARRDRRWYLKVRTNARPEGAAVSHSESGAAVR*
Ga0137385_105663671	3300012359	Vadose Zone Soil	GLSSLTPDGVRLAREWDLCSLYARRDRRWYLKVRTDARPQGAAVSHSESGAAVR*
Ga0137360_106801451	3300012361	Vadose Zone Soil	GLSSLTPDGVRMAREWDLCSLYARRDRRWYLKVRTNTRPEGAAVNHSESGAAVR*
Ga0137390_104711551	3300012363	Vadose Zone Soil	LVSAGLAFHEAGLSSLTPDGVRLAREWDLCSLYARRDRRWYLKVRTNPRPEGAAVSHSESGAAVR*
Ga0137398_108273183	3300012683	Vadose Zone Soil	SLTPDGVRMAREWDLCSLYARRDRRWYLKVRTNTRPEAAAVSHSESGAAVR*
Ga0137397_105110931	3300012685	Vadose Zone Soil	GLSSLTPDGVRMAREWDLCSLYARRDRRWYLKVRTNTRPEAAAVSHSESGAAVR*
Ga0137397_108029171	3300012685	Vadose Zone Soil	AFHEAGLSSLTPDGVRLAREWDLCSLYARRDRRWYSKVRAIARPEGAAVSHSESGAAVR*
Ga0137397_111421951	3300012685	Vadose Zone Soil	AGLSSLTPDGVRMAREWDLCSLYARRDRRWYLKVRTNTRPEGAAVNHSESGAAVR*
Ga0137396_101958721	3300012918	Vadose Zone Soil	LTPDGVRLAREWDLCSLYARRDRRWYSKVRAIARPQGAAVSHSESGAAVR*
Ga0137394_109277901	3300012922	Vadose Zone Soil	GLSSLTPDGVRMAREWDLCSLYARRDRRWYLKVRTNTRPEAAAVSHSESSAAVR*
Ga0137394_111271371	3300012922	Vadose Zone Soil	GLSSLTPDGVRMAREWDLCSLYARRDRRWYLKVRTNTRPEGAAVSHSESGAAVR*
Ga0137413_101858941	3300012924	Vadose Zone Soil	PDGVRLAREWDLCSLYARRDRRWYLKVRADARPEGAAVSHSESGAAVR*
Ga0137413_106023653	3300012924	Vadose Zone Soil	LSSLTPDGVRLAREWDLCSLYARRDRRWYLKVRAIARPQGAAVSHSESGAAVR*
Ga0137413_115217882	3300012924	Vadose Zone Soil	LTPDGARLAREWDLCSLYARRDRRWYLKVRANARPEGAAVNHSESGAAVR*
Ga0137419_102602433	3300012925	Vadose Zone Soil	SSLTPDGVRLAREWDLCSLYARRDRRWYLKVRANPRPEGAGVSRSESGAPVR*
Ga0137419_103449371	3300012925	Vadose Zone Soil	RLAREWDLCSLYARRDRRWYLKVRTDARPQGAAVSHSESGAAVR*
Ga0137419_117817141	3300012925	Vadose Zone Soil	LVSAGLAFHEAGLSSLTPDGARLAREWDLCSLYARRDRRWYWKVRTNPRPEGAAVSHSESGVAVR*
Ga0137419_119689331	3300012925	Vadose Zone Soil	VSAGLAFHEAGLSSLTPDGVRLAREWDLCSLYARRDRRWYLKVRTNMRPEGAAVSHSESGAAVR*
Ga0137416_100534423	3300012927	Vadose Zone Soil	FHEAGLSSLTPDGVRLAREWDPCSLYARRDRRWYLKVRTNPLPEGAAVSHSESGAAVR*
Ga0137407_102570335	3300012930	Vadose Zone Soil	FHEAGLSSLTPDGVRLAREWDLCSLCARRDRRWYLKVRANARPEGAAVSHSESGAAVR*
Ga0137407_103478963	3300012930	Vadose Zone Soil	AGLAFHEAGLSSLTPDGERLAREWDLCSLYARRDRRWYLKVRTNARSEGAAVSHSESGAAVR*
Ga0137407_105227511	3300012930	Vadose Zone Soil	WDLCSLYARRDRRWYLKVRANARPEGAAISHSESGAAVP*
Ga0137407_111526341	3300012930	Vadose Zone Soil	MEWDLCSLYARRDRRWYLKVRTNARSEGAAVSHSESSTAVR*
Ga0137407_122850512	3300012930	Vadose Zone Soil	VSAGLAFREAGLSSLTPDGARLAREWDLCSLYARRDRRWYWKVRTNPRPEGAAVGHSESGVAVR*
Ga0162652_1000825451	3300012941	Soil	LTPDGVRLAREWDLCSLYARRDRRWYLKVRTNARPEGATVSHSESGATVR*
Ga0137410_103042081	3300012944	Vadose Zone Soil	SLTPDGVRMAREWDLCSLYARRDRRWYLKVRTNTRPEAAAVSHSESSAAVR*
Ga0137410_114020372	3300012944	Vadose Zone Soil	PDGVRMAREWDLCSLYARRDRRWYLKVRTNTRPEGAAVSHSESGAAVR*
Ga0137405_10991631	3300015053	Vadose Zone Soil	VSAGLAFHEAGLSSLMTPDGVRLAMEWDRCSLYARRDRRWYLKVRANARPQGAAVSHSESDAAIR*
Ga0167639_10127321	3300015080	Glacier Forefield Soil	ADGVRLAREWDLCSLYARRDRRWYLKVRTNTRPEGVAVSHSESGAAVR*
Ga0167668_10336061	3300015193	Glacier Forefield Soil	LVSAGLAFHEAGLSSLTPDGARLAREWDLCSLYARRDRRWYLKVRTNTRPEGTAVSHSESGAAVR*
Ga0137409_105289031	3300015245	Vadose Zone Soil	GRCDLVSAGLAFHEAGLSSLTPDGVRLAREWDLCSLYARRDRRWYLKVRTSARPEGAAVSHSESGGAVR*
Ga0137403_101158311	3300015264	Vadose Zone Soil	RLAREWDLCSLYARRDRRWYLKVRANARPQGAAVNHSESSVAVR*
Ga0137403_110930522	3300015264	Vadose Zone Soil	HEAGLSSLTPDGARLAREWDLCSLYARRDRRWYLKVRANARPQGAAVSYSESGAAVR*
Ga0184638_11767281	3300018052	Groundwater Sediment	SAGLAFHEAGLSSLTPDGLRLAREWDLCSLYARRDRRWYLKVRANARPQGATVSHSESGAAVR
Ga0184619_104590492	3300018061	Groundwater Sediment	DGVRLAREWDLCSLYARRDRRWYLKVRTNARSEGAAVSHSESSAAVR
Ga0184617_10677821	3300018066	Groundwater Sediment	LAREWDLCSLYARRDRRWYLKMRAIARPQGAAVSHSESGAAVR
Ga0184635_101876192	3300018072	Groundwater Sediment	ELVSAGLAFHEAGLSSLTPDGVRLAREWDLCSLYARRDRRWYLKVRANARPQGATVSHSESGAAVR
Ga0184635_103577061	3300018072	Groundwater Sediment	LSSLTPDGVRLAREWDLCSLYARRDRRWYLKVRTNARPEGAAVSRSESGAAVR
Ga0184632_100619044	3300018075	Groundwater Sediment	FREAGLSSLTPDGVRLAREWDPCSLYARRDRRWYLKVRTNARSEGAAVSHSESSAAVR
Ga0184632_101217892	3300018075	Groundwater Sediment	REAGLSSLTPDGVRLAREWDLRSLYARRDRRWYLKVRTNARPEGAAVSHSESGAAVR
Ga0184632_101729534	3300018075	Groundwater Sediment	SAGLAFHEAGLSSLTPDGVRLAREWDLCSLYARRDRRWYLKVRTNARPEGAPVSRSESGAAVR
Ga0137408_11022133	3300019789	Vadose Zone Soil	RCDLVSAGLAFHEAGLSSLTPDGVRMAREWDLCSLYARRDRRWYLKVRTNTRPEGAAVNHSESGAAVR
Ga0193705_10517093	3300019869	Soil	DLCSLYARRDRRWYLKVRTNARSEGAAVSHSESSAAVR
Ga0193700_10547792	3300019873	Soil	AGLAFHEAGLSSLTPDGVRLAREWDLCSLYARRDRRWYLKVRAIARPQGAAVSHSESGAAVR
Ga0193722_10249934	3300019877	Soil	RCDLVSAGLAFHEAGLSSLTPDGVRLAREWDLCSLYARRDRRWYLKVRTNTRLGGAAVSHSASGAVR
Ga0193747_10903872	3300019885	Soil	SAGLAFHQAGLSSLTPDGVRLAREWDLCSLYARRDRRWYLKVRTNARPESAAVSHSESGAAVR
Ga0193727_11973542	3300019886	Soil	LSSLTPDGARLAREWDLCSLYARRDRRWYWKVRTNPRPEGAAVSHSESGVAVR
Ga0193718_11016522	3300019999	Soil	GLAFHEAGLSSLTPDGVRLAREWDLCSLYARRDRRWYLKVRADARPEGAAVSRSESGAAV
Ga0193755_10681142	3300020004	Soil	AGLSFLTPDGVRLAMEWDLCSLYARRDRRWYSKVRANARPEGAAVSHSESGAAVR
Ga0193734_10901342	3300020015	Soil	SAGLAFHEAGLSSLTPDAERLAREWDLCSLYARRDRRWYLKVRADARPEGAAVSRSESGAAVR
Ga0193724_10802961	3300020062	Soil	DGERLAREWDLCSLYARRDRRWYLKVRTNARSEGAAVSHSESGAAVR
Ga0179596_101049614	3300021086	Vadose Zone Soil	GLAFHEAGLSSLTPDGAHLAGEWDLCSLYARRDRRWYLKVRTNARPEGAAVSHSESGAAV
Ga0179596_105002231	3300021086	Vadose Zone Soil	AGLSSLTPDGVRMAREWDLCSLYARRDRRWYLKVRTNTRPEGAAVSHSESGAAVR
Ga0193709_10844692	3300021411	Soil	PDGERLAMEWDLCSLYARRDRRWYLKVRSIACPLGAAVSHSESGAAVR
Ga0222622_106354333	3300022756	Groundwater Sediment	EAGLSSLTPDGVRLAREWDPCSLYARRDRRWYLKVRANARSEGAAVSHSESSAAVR
Ga0209838_10589141	3300026214	Soil	LAFHEAGLSSLTPDGVRLAREWDLCSLYARRDRRWYLKVRTNTRLGGAAVSHSASGAVR
Ga0209890_100079621	3300026291	Soil	TPDGVRLAREWDLCSLYARRDRRWYLKVRTNARAGGAAVSHSESGAANR
Ga0209890_100580241	3300026291	Soil	LSSLTPDGARLAREWDLCSLYARRDRRWYLKVRTNTRPEGAAVSHSESGAAVR
Ga0209890_100609901	3300026291	Soil	VRLAREWDLCSLYARRDRRWYLKVRTNPRPEGAAVNHSESGAAVR
Ga0209647_12361991	3300026319	Grasslands Soil	LVSAGLAFHEAGLSSLTPDGVRLAREWDPCSLYARRDRRWYLKVRTNPLPEGAAVSHSESGAAVR
Ga0257170_10145151	3300026351	Soil	GLAFHEAGLSSLTPDGERLAMEWDLCSLYARRDRRWYLKVRSIACPQGAAVSHSESGAAV
Ga0257179_10072791	3300026371	Soil	LAFHEAGLSSLTPDGVRMAREWDLCSLYARRDRRWYLKVRTNARSEGAAVSHSESSAAVR
Ga0257155_10057615	3300026481	Soil	VRLAREWDLCSLYARRDRRWYLKVRTNPRPEGAAVSHSESGAAVR
Ga0257172_10559542	3300026482	Soil	DLVSAGLAFHEARLSSLTPDGVRLAREWDLRSLYARRDRRWYFKVRTNPRPEGAAVSHSESGAAVR
Ga0257160_10759621	3300026489	Soil	FHEAGLSSLTPDGVRLAREWDPCSLYARRDRRWYLKVRTNPLPEGAAVSHSESGAAVR
Ga0257165_10701371	3300026507	Soil	GLSSLTPDGVRLAREWDPCSLYARRDRRWYLKVRTNARSEGAAVSHSESSAAVR
Ga0257161_10974093	3300026508	Soil	AGLSSLTPDGVRLAREWDLRSLYARRDRRWYLKVRTNGRPEGAAVSAYICRF
Ga0257158_11095901	3300026515	Soil	GRCELVSAGLAFHEAGLSSLTPDGVRLAREWDLCSLYARRDRRWYLKVRTNMRPEGAAVSHSESGAAVR
Ga0179587_104694651	3300026557	Vadose Zone Soil	WDLCSLYARRDRRWYLKVRTNTRPEGAAVSHSESGAAVR
Ga0209213_10099874	3300027383	Forest Soil	PDGVRLAREWDLCSLYARRDRRWYLKVRATARPEGAAVSLSESGAAVR
Ga0209106_10312761	3300027616	Forest Soil	LTPDGERLAMEWDLCSLYARRDRRWYLKVRANARPEGAGVSHSESGAAVR
Ga0208988_11604011	3300027633	Forest Soil	SLTPDGARLAMEWDLCSLYARRDRRWYLKVQANARAEGAAVSYSESGAAVR
Ga0209388_11386281	3300027655	Vadose Zone Soil	TPDGVRLAREWDPCSLYARRDRRWYLKVRTNARSEGAAVSHSESSAAVR
Ga0208990_10307411	3300027663	Forest Soil	DGERLAREWDLCSLYARRDRRWYLKVRSIACPQGAAVSHSESGAAVR
Ga0209588_11420411	3300027671	Vadose Zone Soil	GRCDLVSAGLAFHEAGLSSLTPDGVRLAREWDLCSLYARRDRRWYLKVRTSARPEGAAVGHSESGAAVR
Ga0209011_10839221	3300027678	Forest Soil	HEAGLSSLTPDGARLAREWDLCSLYARRDRRWYLKVRTNPRSEGAAVSHSESGAAVR
Ga0208991_10331042	3300027681	Forest Soil	CDLVSAGLAFHEAGLSSLTPDGVRLAREWDPCSLYARRDRRWYLKVRTNPRSESAAVSHSKSGAAIR
Ga0209180_104156841	3300027846	Vadose Zone Soil	LTPDGARLAREWDLCSLYARRDRRWYWKVRTNPRPEGAAVSHSESGAAVR
Ga0209701_1000476713	3300027862	Vadose Zone Soil	EAGLSSLTPDGARLAREWDLCSLYARRDRRWYWKVRTNPRPEGAAVSHSESGAAVR
Ga0209283_104051183	3300027875	Vadose Zone Soil	AGLSSLTPDGVRLAREWDLCSLYARRDRRWYLKVRTNARPEGAAVSHSESGAAVR
Ga0209068_105870721	3300027894	Watersheds	GVRLAREWDLCSLYARRDRRWYLKVRAIARPQGAAVSHSESGAAVR
Ga0209488_101728731	3300027903	Vadose Zone Soil	EAGLSSLTPDGVRLAREWDLRSLYARRDRRWYLKVRTNPRPEGAAVSHSESGAAVR
Ga0209488_107539041	3300027903	Vadose Zone Soil	DLVSAGLAFHEAGLSSLTPDGVRLAREWDLCSLYARRDRRWYLKVRADARPEGAAVSRSESRAAVR
Ga0209069_100404941	3300027915	Watersheds	HEAGLSSLTPDGVRLAREWDLCSLYARRDRRWYLKVRAIARPQGAAVSHSESGAAVR
Ga0209526_107570001	3300028047	Forest Soil	LTPDGARLAREWDLCSLYARRDRRWYLKVRANTRPEGAAVSHSESGAAVR
Ga0209526_109977592	3300028047	Forest Soil	SLTPDGARLAREWDLCSLYARRDRRWYLKVRTNPRSEGAAVSHSESGAAVR
Ga0137415_100869583	3300028536	Vadose Zone Soil	TPDGVRLAREWDPCSLYARRDRRWYLKVRTNPLPEGAAVSHSESGAAVR
Ga0307305_102412521	3300028807	Soil	DQSAPAHAGLAFHEAGLSSLTPDGARLAREWDLCSLYARRDRRWYLKVRTNARPEGAAVSHSESGAAVR
Ga0307302_100681963	3300028814	Soil	GLAFHEAGLSSLTPDGVRLAREWDLCSLYARRDRRWYLKVRTDARPQGAAVSHSESGAAV
Ga0307296_100744575	3300028819	Soil	ERLAREWDLCSLYARRDRRWYLKVRANARPQGAAVSHSESGAAVR
Ga0307312_103624073	3300028828	Soil	AGLAFHQAGLSSLTPDGVRLAREWDLCSLYARRDRRWYLKVRANARPPGAAVSHSESGVAVR
Ga0307277_102774802	3300028881	Soil	AFHEAGLSSLTPDGVRLAREWDLCSLYARRDRRWYLKVRTNARPQGATVSHSESGATVR
Ga0370497_0091419_44_202	3300034965	Untreated Peat Soil	MSSLTPDGVRLAGEWDLRSLYARRDRRWYLKVRKNARAEATISHSESGAAVR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F043592

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences