Metagenome / Metatranscriptome Family F043575

Basic Information
Family ID	F043575
Family Type	Metagenome / Metatranscriptome
Number of Sequences	156
Average Sequence Length	44 residues
Representative Sequence	MSFWRRVACVLLLLVVGVSLAANWLAPAGYAKQYREAAGAP
Number of Associated Samples	136
Number of Associated Scaffolds	156

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	95.51 %
% of genes near scaffold ends (potentially truncated)	98.72 %
% of genes from short scaffolds (< 2000 bps)	88.46 %
Associated GOLD sequencing projects	131
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (12.180 % of family members)
Environment Ontology (ENVO)	Unclassified (21.795 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.846 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 49.28% β-sheet: 0.00% Coil/Unstructured: 50.72%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 156 Family Scaffolds
PF00528	BPD_transp_1	80.77
PF00990	GGDEF	8.97
PF13185	GAF_2	4.49
PF13487	HD_5	1.28
PF13426	PAS_9	1.28
PF00989	PAS	0.64
PF04223	CitF	0.64
PF13492	GAF_3	0.64

COG ID	Name	Functional Category	% Frequency in 156 Family Scaffolds
COG3051	Citrate lyase, alpha subunit	Energy production and conversion [C]	0.64

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	94.87 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	75.00 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	18.59 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	75.00 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	18.59 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	75.00 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	18.59 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	75.00 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	16.03 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.64 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	75.00 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	8.97 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	7.05 %
Granulicella tundricola	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella tundricola	0.64 %
Unclassified	root	N/A	0.00 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10150936	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	874	Open in IMG/M
3300001356\|JGI12269J14319_10097776	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1456	Open in IMG/M
3300001471\|JGI12712J15308_10064832	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	924	Open in IMG/M
3300001593\|JGI12635J15846_10082200	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2354	Open in IMG/M
3300001593\|JGI12635J15846_10134248	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella tundricola	1724	Open in IMG/M
3300002245\|JGIcombinedJ26739_100737474	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	864	Open in IMG/M
3300002245\|JGIcombinedJ26739_100932959	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	751	Open in IMG/M
3300002245\|JGIcombinedJ26739_101294581	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	620	Open in IMG/M
3300002245\|JGIcombinedJ26739_101389221	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300002568\|C688J35102_118244233	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300004080\|Ga0062385_10446832	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300004152\|Ga0062386_100345165	All Organisms → cellular organisms → Bacteria	1192	Open in IMG/M
3300005437\|Ga0070710_10066887	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	2061	Open in IMG/M
3300005454\|Ga0066687_10780323	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300005541\|Ga0070733_10615903	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	728	Open in IMG/M
3300005542\|Ga0070732_10615771	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	660	Open in IMG/M
3300005542\|Ga0070732_10821987	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300005557\|Ga0066704_10684693	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	648	Open in IMG/M
3300005575\|Ga0066702_10009057	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4339	Open in IMG/M
3300005586\|Ga0066691_10817428	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300005586\|Ga0066691_10892887	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300005591\|Ga0070761_10138096	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1423	Open in IMG/M
3300005591\|Ga0070761_10354923	All Organisms → cellular organisms → Bacteria	889	Open in IMG/M
3300005921\|Ga0070766_10694519	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300006028\|Ga0070717_10459812	All Organisms → cellular organisms → Bacteria → Acidobacteria	1148	Open in IMG/M
3300006102\|Ga0075015_100369564	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	803	Open in IMG/M
3300006162\|Ga0075030_100217403	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1536	Open in IMG/M
3300006173\|Ga0070716_100055941	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	2260	Open in IMG/M
3300006176\|Ga0070765_100199914	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1813	Open in IMG/M
3300006797\|Ga0066659_11158622	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300007265\|Ga0099794_10286223	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	852	Open in IMG/M
3300007788\|Ga0099795_10047839	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1547	Open in IMG/M
3300009524\|Ga0116225_1036626	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	2410	Open in IMG/M
3300009524\|Ga0116225_1435567	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300009624\|Ga0116105_1021152	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1367	Open in IMG/M
3300009683\|Ga0116224_10437299	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	623	Open in IMG/M
3300010043\|Ga0126380_10235117	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1256	Open in IMG/M
3300010360\|Ga0126372_12847903	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300010376\|Ga0126381_100890549	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1281	Open in IMG/M
3300010880\|Ga0126350_11032391	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300012203\|Ga0137399_11296494	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	612	Open in IMG/M
3300012209\|Ga0137379_11232583	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	655	Open in IMG/M
3300012210\|Ga0137378_10530690	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1085	Open in IMG/M
3300012363\|Ga0137390_10122079	All Organisms → cellular organisms → Bacteria	2580	Open in IMG/M
3300012685\|Ga0137397_10554570	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	855	Open in IMG/M
3300012923\|Ga0137359_11495115	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	563	Open in IMG/M
3300012929\|Ga0137404_11234213	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	688	Open in IMG/M
3300013105\|Ga0157369_11020238	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	847	Open in IMG/M
3300014657\|Ga0181522_10284921	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	980	Open in IMG/M
3300017924\|Ga0187820_1190536	All Organisms → cellular organisms → Bacteria → Acidobacteria	636	Open in IMG/M
3300017924\|Ga0187820_1211527	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609	Open in IMG/M
3300017955\|Ga0187817_10400944	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	875	Open in IMG/M
3300017970\|Ga0187783_10207324	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	1438	Open in IMG/M
3300017972\|Ga0187781_10861869	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	659	Open in IMG/M
3300018006\|Ga0187804_10039861	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	1804	Open in IMG/M
3300018007\|Ga0187805_10510913	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	564	Open in IMG/M
3300018008\|Ga0187888_1205027	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	781	Open in IMG/M
3300018009\|Ga0187884_10124918	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1100	Open in IMG/M
3300018017\|Ga0187872_10446752	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300018030\|Ga0187869_10024607	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	3393	Open in IMG/M
3300018030\|Ga0187869_10576176	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300018037\|Ga0187883_10515455	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	617	Open in IMG/M
3300018042\|Ga0187871_10392258	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	767	Open in IMG/M
3300018058\|Ga0187766_10145710	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	1467	Open in IMG/M
3300018058\|Ga0187766_11096844	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	571	Open in IMG/M
3300018062\|Ga0187784_10732546	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	790	Open in IMG/M
3300018085\|Ga0187772_10458082	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	895	Open in IMG/M
3300018085\|Ga0187772_11225678	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553	Open in IMG/M
3300018088\|Ga0187771_10630888	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	909	Open in IMG/M
3300018090\|Ga0187770_10797830	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	756	Open in IMG/M
3300019786\|Ga0182025_1097246	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	1926	Open in IMG/M
3300020580\|Ga0210403_10937017	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	681	Open in IMG/M
3300020581\|Ga0210399_10079183	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	2668	Open in IMG/M
3300020582\|Ga0210395_10514733	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	900	Open in IMG/M
3300020583\|Ga0210401_11055653	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	671	Open in IMG/M
3300021088\|Ga0210404_10227047	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1009	Open in IMG/M
3300021171\|Ga0210405_11102263	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	593	Open in IMG/M
3300021171\|Ga0210405_11389385	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300021181\|Ga0210388_10819585	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	806	Open in IMG/M
3300021403\|Ga0210397_10007596	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6571	Open in IMG/M
3300021407\|Ga0210383_10730074	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	850	Open in IMG/M
3300021420\|Ga0210394_10875221	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	782	Open in IMG/M
3300021432\|Ga0210384_10304061	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	1436	Open in IMG/M
3300021433\|Ga0210391_11362570	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300021475\|Ga0210392_11233313	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300021477\|Ga0210398_10355303	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1195	Open in IMG/M
3300021478\|Ga0210402_10584095	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1036	Open in IMG/M
3300022557\|Ga0212123_10299737	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1124	Open in IMG/M
3300022734\|Ga0224571_106440	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	783	Open in IMG/M
3300024220\|Ga0224568_1040119	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300024225\|Ga0224572_1069906	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	649	Open in IMG/M
3300024271\|Ga0224564_1081375	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	650	Open in IMG/M
3300025412\|Ga0208194_1004981	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	2402	Open in IMG/M
3300025906\|Ga0207699_11426894	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300025911\|Ga0207654_10899107	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	642	Open in IMG/M
3300025929\|Ga0207664_10950391	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	771	Open in IMG/M
3300027334\|Ga0209529_1095539	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300027505\|Ga0209218_1009955	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	1632	Open in IMG/M
3300027545\|Ga0209008_1065958	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	818	Open in IMG/M
3300027575\|Ga0209525_1035017	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1237	Open in IMG/M
3300027591\|Ga0209733_1000206	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9797	Open in IMG/M
3300027701\|Ga0209447_10227289	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300027853\|Ga0209274_10369343	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	740	Open in IMG/M
3300027879\|Ga0209169_10024014	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3268	Open in IMG/M
3300027898\|Ga0209067_10015481	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3957	Open in IMG/M
3300027905\|Ga0209415_10984994	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	563	Open in IMG/M
3300027911\|Ga0209698_10236430	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	1464	Open in IMG/M
3300028017\|Ga0265356_1016716	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	794	Open in IMG/M
3300028746\|Ga0302233_10363249	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300028759\|Ga0302224_10359347	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	589	Open in IMG/M
3300029636\|Ga0222749_10779837	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300029908\|Ga0311341_10703072	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	564	Open in IMG/M
3300029914\|Ga0311359_10083740	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	3163	Open in IMG/M
3300029918\|Ga0302143_1109126	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	654	Open in IMG/M
3300029945\|Ga0311330_10073578	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	3551	Open in IMG/M
3300029955\|Ga0311342_10202522	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	1915	Open in IMG/M
3300030041\|Ga0302274_10127788	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	1334	Open in IMG/M
3300030051\|Ga0302195_10150858	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1109	Open in IMG/M
3300030057\|Ga0302176_10284426	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	663	Open in IMG/M
3300030058\|Ga0302179_10155697	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1009	Open in IMG/M
3300030618\|Ga0311354_11057786	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	744	Open in IMG/M
3300030618\|Ga0311354_11709759	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300030847\|Ga0075405_10868141	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	676	Open in IMG/M
3300031231\|Ga0170824_122915679	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	579	Open in IMG/M
3300031236\|Ga0302324_101550590	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	857	Open in IMG/M
3300031241\|Ga0265325_10372272	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	628	Open in IMG/M
3300031247\|Ga0265340_10542550	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300031474\|Ga0170818_108972909	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	683	Open in IMG/M
3300031474\|Ga0170818_114821512	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	847	Open in IMG/M
3300031525\|Ga0302326_11422592	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	935	Open in IMG/M
3300031640\|Ga0318555_10670270	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	561	Open in IMG/M
3300031708\|Ga0310686_105030809	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	775	Open in IMG/M
3300031711\|Ga0265314_10265085	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	979	Open in IMG/M
3300031712\|Ga0265342_10608358	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300031715\|Ga0307476_10014734	All Organisms → cellular organisms → Bacteria	4970	Open in IMG/M
3300031715\|Ga0307476_11289426	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300031718\|Ga0307474_10324083	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1189	Open in IMG/M
3300031718\|Ga0307474_11074084	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	637	Open in IMG/M
3300031718\|Ga0307474_11462943	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300031753\|Ga0307477_10307365	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1094	Open in IMG/M
3300031753\|Ga0307477_10875743	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300031823\|Ga0307478_11642918	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300031938\|Ga0308175_102620416	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	564	Open in IMG/M
3300032001\|Ga0306922_10419740	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	1432	Open in IMG/M
3300032076\|Ga0306924_11162756	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	837	Open in IMG/M
3300032160\|Ga0311301_11423848	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	862	Open in IMG/M
3300032421\|Ga0310812_10521923	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300032770\|Ga0335085_11179336	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	815	Open in IMG/M
3300032782\|Ga0335082_10895044	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	750	Open in IMG/M
3300032805\|Ga0335078_10520355	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1523	Open in IMG/M
3300032828\|Ga0335080_10062227	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4133	Open in IMG/M
3300032828\|Ga0335080_11000614	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	851	Open in IMG/M
3300032896\|Ga0335075_11449268	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	575	Open in IMG/M
3300032898\|Ga0335072_10094668	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	3837	Open in IMG/M
3300032955\|Ga0335076_10776234	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	840	Open in IMG/M
3300033158\|Ga0335077_10394814	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1488	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.23%
Host-Associated	Host-Associated	5.77%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.49%
Aquatic	Environmental → Aquatic	14.74%
Plants	Host-Associated → Plants	5.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	69.23%
Freshwater	Environmental → Aquatic → Freshwater	11.54%
Peat	Environmental → Terrestrial → Peat	9.62%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.77%
Sediment	Environmental → Aquatic → Sediment	2.56%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.64%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.64%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.67%
Loam	Environmental → Terrestrial → Soil → Loam	15.38%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	12.18%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	11.54%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	9.62%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.21%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.56%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.64%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.64%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	20.51%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.67%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	11.54%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.54%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	9.62%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	7.05%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.85%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.21%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.21%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.56%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.28%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.64%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.64%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.64%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.64%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.64%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.18%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.69%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.77%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.77%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.77%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.13%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.13%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	4.49%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.49%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	4.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.85%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.85%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.21%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	3.21%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.56%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.56%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.92%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.92%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.28%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.28%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.28%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.64%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.64%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.64%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.64%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.64%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.64%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.64%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.64%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.64%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022734	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU3	Host-Associated	Open in IMG/M
3300024220	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLU5	Environmental	Open in IMG/M
3300024225	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5	Host-Associated	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300025412	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10 (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027334	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O2 (SPAdes)	Environmental	Open in IMG/M
3300027505	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027575	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027701	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028017	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4	Host-Associated	Open in IMG/M
3300028746	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_1	Environmental	Open in IMG/M
3300028759	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029908	II_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029914	III_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029918	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_1	Environmental	Open in IMG/M
3300029945	I_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029955	II_Bog_E2 coassembly	Environmental	Open in IMG/M
3300030041	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_1	Environmental	Open in IMG/M
3300030051	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_2	Environmental	Open in IMG/M
3300030057	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030847	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031241	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG	Host-Associated	Open in IMG/M
3300031247	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG	Host-Associated	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031711	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG	Host-Associated	Open in IMG/M
3300031712	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG	Host-Associated	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F043575

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_101509362	3300000567	Peatlands Soil	MSFWRRVACVVLLLAVGVSLAANWLAPAGYARQYREAAGAP
JGI12269J14319_100977761	3300001356	Peatlands Soil	MNFYRINAWRRLACALLLVVAGVTLAANWLAPAGYARQYREAAGAPPSHEHWLGTD
JGI12712J15308_100648322	3300001471	Forest Soil	MRMNIWRRFACAVLLLVAVASLGASWLAPAGYAKQDRDATDAVPS
JGI12635J15846_100822003	3300001593	Forest Soil	MSVLRKLACAALLLVVGVSMAANWLAPAGYAKQYRTQPNA
JGI12635J15846_101342483	3300001593	Forest Soil	MKLWPTNFWRSSACAVLLLVVGLSLAANWLAPAGY
JGIcombinedJ26739_1007374742	3300002245	Forest Soil	MKFWRKVACVLLVLVIGASLAANWLAPDGYAKQYRE
JGIcombinedJ26739_1009329592	3300002245	Forest Soil	MRMNIWRRFACAVLLLVAVASLGASWLAPAGYAKQDRDATDAVPSRVHW
JGIcombinedJ26739_1012945812	3300002245	Forest Soil	MKFLRGNLWRNVACVVLLLVVGTSLSANWLAPDGYARQYR
JGIcombinedJ26739_1013892212	3300002245	Forest Soil	MKFLRGNLWRNVACVVLLLVVGTSLSANWLAPDGYARQYREAADA
C688J35102_1182442331	3300002568	Soil	MRLWRRLACALLLLVLVVSLAANWLAPAGYAKQYREAAGASPSR
Ga0062385_104468321	3300004080	Bog Forest Soil	MNFWRKLACVVLVLVIGASLAANWLAPAGYAKQYRDATNAPPSRTHWLGT
Ga0062386_1003451653	3300004152	Bog Forest Soil	VNVWRRVACVVLLLVVTVSLAASWLAPAGYAKQYREAAGAPP
Ga0070710_100668873	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MSFWRKIACAVLLLVVTVSLAANWLAPAGYAKQDREAAGAPPSHA
Ga0066687_107803232	3300005454	Soil	MKLRHTDIWRTVACSVLLLVVGVSLAANWLAPAGYAKQYRE
Ga0070733_106159032	3300005541	Surface Soil	MKLWRAAAYGVLLLVAGVSLSANWLAPSGYARQYREA
Ga0070732_106157712	3300005542	Surface Soil	MKILRRNFWRNLVCGILLVVVGVSVAANWLAPGGYAKQYRE
Ga0070732_108219871	3300005542	Surface Soil	MRIQRKNFWRTLACAVLLLVVSISLAANWLAPAGYAKQYREA
Ga0066704_106846932	3300005557	Soil	MSFWRKIACMVLLLVVAVSLAANCLAPAGYAKQDREA
Ga0066702_100090571	3300005575	Soil	MKLRHTDIWRTVACSVLLLVVGVSLAANWLAPAGYAKQYRETAGA
Ga0066691_108174281	3300005586	Soil	MKTGRRLACLVLVLVVGASLAAGWLAPAGYAKQYREAAGAAP
Ga0066691_108928872	3300005586	Soil	MKIWRRVACAVLLLVLGMSLAATWLAPAGHAKQYREAVNSPPSRQHWLGTDD
Ga0070761_101380961	3300005591	Soil	MTAWRRFACALLFLMVSVSLAASWLAPGGYARQYREV
Ga0070761_103549232	3300005591	Soil	MTAWRRLACALLLLVVSVSLAASWLAPGGYARQYREVAGAPPSAAHWLG
Ga0070766_106945191	3300005921	Soil	MKFLRENLWRNVACVVLLLVVGTSLAANWLAPDGYARQYRETADAPPSHAHWLG
Ga0070717_104598121	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MSVIRKLACAILVLVLAASLAAGWLAPAGYATQFRESPNS
Ga0075015_1003695641	3300006102	Watersheds	MSFWRKAACAVLLLVGVVSLAANWLAPAGYAKQYREAAGAPPS
Ga0075030_1002174031	3300006162	Watersheds	MSFWRRVACVVLLLTVGVSLAANWLAPAGYARQYRE
Ga0070716_1000559413	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MRLRHQNVWRTMACVVLVLLVSISMAANWLAPAGYAKQYREA
Ga0070765_1001999141	3300006176	Soil	MRLWRKHFWRAAACAVLLLVVGGSLAAGWLAPAGYAKQYRE
Ga0066659_111586222	3300006797	Soil	MSFWRKIACGVLLLVVAVSLAANWLAPAGYAKQDREAAGAPPSHAHWLG
Ga0099794_102862232	3300007265	Vadose Zone Soil	MSVFRKLACVALLLVVGVSMAANWLAPAGYAKQYRTQPNAPPTRQHWLGTDEVG
Ga0099795_100478391	3300007788	Vadose Zone Soil	MSLGRKLACAVLLLVLGVSAAANWLAPAGYSRQYREATNA
Ga0116225_10366261	3300009524	Peatlands Soil	MSLWRKLACAVLVLVVCASLAASWLAPSGYAKQYRDATDAPPSRTH
Ga0116225_14355671	3300009524	Peatlands Soil	VSLWRKLPYVLLALVLAASLAANWLAPAGYARQYRE
Ga0116105_10211521	3300009624	Peatland	MSLWQKLACALLVLVLGASVAANWLAPAGYARQYREATDAPPSRTHWLGT
Ga0116224_104372991	3300009683	Peatlands Soil	MNFWRKLACVVLVLVLGASLAANWLAPAGYARQYRDLTNAPPS
Ga0126380_102351173	3300010043	Tropical Forest Soil	MRIWRTIACIVLVLVVGASLAANRLAPGGYAKQYREAVGAPPSHQHWL
Ga0126372_128479032	3300010360	Tropical Forest Soil	MSIWRRLAGAVLLLVLGLSLASNWLAPAGYAKQYRAAA
Ga0126381_1008905491	3300010376	Tropical Forest Soil	MIWRRVACAVLLLVVGVSLAANWLAPAGYAAQDREAADASPSHTHWLGTDEI
Ga0126350_110323911	3300010880	Boreal Forest Soil	MNLWRKLACVILVVVVCASVAANWLAPAGYARQYREATNAAPSRSHWLGTD
Ga0137399_112964941	3300012203	Vadose Zone Soil	MSVFRKLACVALLLAVGVSMAANWLAPSGYAKQYREEANAAPSHQHWL
Ga0137379_112325831	3300012209	Vadose Zone Soil	MSLSGKNIWRTNIWRTLACVILLLVVSVSLAANWLAPAGYAKQYRDAADAAPSHAHWLG
Ga0137378_105306902	3300012210	Vadose Zone Soil	MSLSGKNIWRTNIWRTLACVILLLVVSVSLAANWLAPAGYAKQYRDAAG
Ga0137390_101220791	3300012363	Vadose Zone Soil	LSIWRKVAWVVLLLVAGVSLAANWLAPAGYARQYRETVNAPP
Ga0137397_105545702	3300012685	Vadose Zone Soil	MSIWRKVAWAVLLLVVSVSLAANWIAPGEYARQYREATGAPP
Ga0137359_114951152	3300012923	Vadose Zone Soil	MRLWRIPALRMNVWRSLACAVLLLVVGVSLAANWLAPGGYARQYREAADAAPSRQHWLGT
Ga0137404_112342132	3300012929	Vadose Zone Soil	VKLWRALVCVVLLLVVCVSLAANWLAPAGYAKQYRD
Ga0157369_110202381	3300013105	Corn Rhizosphere	MKIWRRVACAVLLLVVGVSLCATFVAPAGYARQYREAADAPPSRQHWL
Ga0181522_102849211	3300014657	Bog	MTAWRRFACALLLLVVSVSLAASWLAPGGYARQYREVAGAPPSAAHWL
Ga0187820_11905361	3300017924	Freshwater Sediment	MSFWRKLACAVLLLIVCLSMAANWLAPAGYARQDRQAADAPPSRVHWLGTD
Ga0187820_12115272	3300017924	Freshwater Sediment	MSFWRRVACSVLLLVLAVSLAASWLAPAGYARQDRE
Ga0187817_104009442	3300017955	Freshwater Sediment	MRLSRINFWRILACAVLLTVVGVSLAANWLAPAGYARQYREAA
Ga0187783_102073241	3300017970	Tropical Peatland	MSLGQKAACVALALVLGTAAAANWLAPTGYAWQYR
Ga0187781_108618692	3300017972	Tropical Peatland	MSNWRRDVLRRMACAVLLLVVGMSLVANWLAPAGYAKQYREVADAPPSHAHWLG
Ga0187804_100398613	3300018006	Freshwater Sediment	MIFWRRVACVVLLVVVGVSLAANWLAPAGYAKQYRE
Ga0187805_105109131	3300018007	Freshwater Sediment	MKAWRTHVWRTDVWRWLAAVVLLLIVSLSLAANWLAPAGYAKQYREAADAP
Ga0187888_12050271	3300018008	Peatland	MNLWRKLACALLAAILCVSAAANWLAPAGYAKQYREATDAPPSRT
Ga0187884_101249181	3300018009	Peatland	MNLWQKLACAVLAVVLCASVAANWLAPAGYAKQYREATNAPPSRTHWLGTD
Ga0187872_104467521	3300018017	Peatland	MNLWRKLACALLAAILCVSAAANWLAPAGYAKQYREATDAPPSRTHW
Ga0187869_100246071	3300018030	Peatland	MNLWRKLACALLAAILCVSAAANWLAPGGYAKQYREATDAPPSRTHWLG
Ga0187869_105761761	3300018030	Peatland	MNLWRKLACVALAVVVCASLGANWLAPAGYEKQYREATDAP
Ga0187883_105154551	3300018037	Peatland	MNLWQKLACAVLAVVLCASVAANWLAPAGYAKQYREATNAPPSRTH
Ga0187871_103922581	3300018042	Peatland	MSFWRKLACVVLVLVIGASLAANWLASAGYAKQYREATNAPP
Ga0187766_101457103	3300018058	Tropical Peatland	MSLWRKLACVVLLLVAAMSLAANWLAPSGYAKQYR
Ga0187766_110968442	3300018058	Tropical Peatland	MTIWRRVACAVLLLVVGVSLAANWLAPAGYARQYREVAGAPPSCEHWLGTDD
Ga0187784_107325462	3300018062	Tropical Peatland	MSNWRRDVLRRMACAVLLLVVGMSLATNWLAPAGYAKQYREVADAP
Ga0187772_104580822	3300018085	Tropical Peatland	MRLWRSVACIVLLLVVGVSLSANWLAPSGYAKQYRE
Ga0187772_112256781	3300018085	Tropical Peatland	MSLWRKLACVVLVLVVGASLAANWLASAGYARQYREA
Ga0187771_106308882	3300018088	Tropical Peatland	MKIWRRAACAVLLIVVGVSLAANFLAPAGYARQYREAADARPSRQHWLGTDEIGR
Ga0187770_107978302	3300018090	Tropical Peatland	MNLWRKLACAVLAIVLCAAAAANWLAPAGYARQYR
Ga0182025_10972463	3300019786	Permafrost	MNLWRKLACVILAVVLCASFAANWMAPAGYARQYREATNAGPSRT
Ga0210403_109370171	3300020580	Soil	MTGSMNFSRLNFSRTRVWRTLACAVLLLVVSVSLAANWLAPAGYAKQYREAADAVPSH
Ga0210399_100791833	3300020581	Soil	MRIWRRFACVVLLLVVSLSLAANWLAPAGYAKQYREAAGV
Ga0210395_105147332	3300020582	Soil	MNLWQKLACALLAVVLCASAAAKWLAPAGYAKQDREAISAPPSHSHWLGTDDL
Ga0210401_110556532	3300020583	Soil	MSFWRGAAGAVLLLVVGVSLAANRLAPAGYAKQYREAADAPPS
Ga0210404_102270471	3300021088	Soil	MRRWHISIWRSLACAVLLLVVSVSLAANWLAPAGYAKQYRDVAGAAP
Ga0210405_111022632	3300021171	Soil	MNLWRKLACVVLVGVVCASLAANWLAPAGYARQYREATNAA
Ga0210405_113893851	3300021171	Soil	MNPWRTNFWRNLACSVLLLVVGLSLAANWLAPAGYARQFREATDA
Ga0210388_108195851	3300021181	Soil	VNLWRKLACAILALVVLASIGANWLAPAGYAKQYRE
Ga0210397_100075961	3300021403	Soil	MRLWRILACTLLLLVVSVSLAANWLAPAGYAKQYREAAGAAPSH
Ga0210383_107300741	3300021407	Soil	MRLWRILACTLLLLVVSVSLAANWLAPAGYAKQYREAAGAPPSHEHWLGTAE
Ga0210394_108752212	3300021420	Soil	MSLGRKLAFVVLVLVLGASAAANWLAPAGYAKQYREATDAPPSHAHLL
Ga0210384_103040611	3300021432	Soil	MSLGRKLACVVLVLVLAASAAANWLAPAGYAKQYREATDAPPSH
Ga0210391_113625701	3300021433	Soil	MRLCRKLACVVLLIVVGVSVAANWLAPAGYARQYREATDAPPSHVHWLGTDEI
Ga0210392_112333131	3300021475	Soil	MTAWRRLACALLLLVVSVSLAASWLAPGGYARQYREAAGAPPSAAH
Ga0210398_103553031	3300021477	Soil	MNRWQTNFGRNLACAVLLLVVCFSLAANWLAPAGYARQYR
Ga0210402_105840951	3300021478	Soil	MSISRTNIWRALACAVLLLVVGASLSANWLAPAGYAKQYREAADA
Ga0212123_102997373	3300022557	Iron-Sulfur Acid Spring	MNLGRTSFWRKVAGAVLLLVLSLSLAAGWLAPGGYAKQYREAAGAAPS
Ga0224571_1064401	3300022734	Rhizosphere	MSSWQKLACAVLALVLAASLAANWLAPAGYAKQYREATDAPPSR
Ga0224568_10401192	3300024220	Plant Litter	MNFWRTLACAVLLLAVSVSLAANWLAPAGYAKQYREAT
Ga0224572_10699062	3300024225	Rhizosphere	MNPWQKLACAVLALVLAASLAANWLAPAGYAKQYRE
Ga0224564_10813751	3300024271	Soil	MNLWRKLACALLAIVLCASAAANWLAPEGYARQDREAISVPPSRAHWLGT
Ga0208194_10049811	3300025412	Peatland	MNLWRKLACVALAVVVCASLGANWLAPAGYEKQYREATDAPPSHAH
Ga0207699_114268941	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MNVWRRVACAVLLLVAAVSLAANALAPAGYAKQYREAADSGPSRTHLLGTD
Ga0207654_108991071	3300025911	Corn Rhizosphere	MKIWRRVACAVLLLVVGVSLCATFVAPAGYARQYREAA
Ga0207664_109503911	3300025929	Agricultural Soil	MSYWRKVACVVLLLVAAVSLAANWVAPAGYAKQYR
Ga0209529_10955391	3300027334	Forest Soil	MNLWQKLACAILALVLCASAAANWLAPGGYSRQYRDATDA
Ga0209218_10099553	3300027505	Forest Soil	MNLWRKLACVILVVVVCASVAANWLAPAGYARQYREATNAAPSRSHWL
Ga0209008_10659582	3300027545	Forest Soil	MKFWRKVACVLLVLVIGASLAANWLAPDGYAKQYREGTNAPPSRTHWL
Ga0209525_10350171	3300027575	Forest Soil	MTAWRRFACALLLLVVSVSLAASWLAPGGYARQYREVAG
Ga0209733_10002069	3300027591	Forest Soil	MRLSRTNFWRSFACAVLLVVVGASLAANWLAPAGYAKQY
Ga0209447_102272891	3300027701	Bog Forest Soil	MNFWRKLACVVLVLVIGASLAANWLAPAGYAKQYRDATNAPPSRTHW
Ga0209274_103693431	3300027853	Soil	MKFLRGNLWRNVACVVLLLVVGTSLSANWLAPDGYARQYREAADAPPS
Ga0209169_100240142	3300027879	Soil	MKIWRRVACAVLLLVIGVTLAANWLAPAGYAKQYREEADAARHADGADPR
Ga0209067_100154814	3300027898	Watersheds	MKFRRAHVGRWLACAVLLLVVGVSLAANWIAPAGYAKQYREVADAPPS
Ga0209415_109849941	3300027905	Peatlands Soil	MTLWHINFWRSLACAVLLLVVSVSLAANWLAPAGYAKQYREA
Ga0209698_102364303	3300027911	Watersheds	MSFWRKVACAVLLLVMAVSLAASWLAPAGYAKQDR
Ga0265356_10167161	3300028017	Rhizosphere	MKFWRNLACGVLLLVLAASMAANWIAPAGYAKQYRDVADAAPSRTHWLGTDDI
Ga0302233_103632492	3300028746	Palsa	MTAWRRFACAALLLVVSVSLAANWLAPGGYARQYREV
Ga0302224_103593472	3300028759	Palsa	MTAWRRFACAALLLVVSVSLAANWLAPGGYARQYREVAGAPPSAAHW
Ga0222749_107798371	3300029636	Soil	MSLGRKLACVVLVLVLAASAAANWLAPAGYAKQYREATDAPPSHA
Ga0311341_107030721	3300029908	Bog	MSLGRKLALAVLMLVLSAAAAANWLAPAGYAKQYRDAAGA
Ga0311359_100837401	3300029914	Bog	MSLGRKLALAVLMLVLSAAAAANWLAPAGYAKQYRDAAGATPS
Ga0302143_11091262	3300029918	Bog	VSLGRKLACVILALVLCASAAANWLAPAGYARQYREATDAPPSR
Ga0311330_100735781	3300029945	Bog	VSLGRKLACGILALVLCASAAANWLAPAGYARQYREATDAPPSRTHWLGT
Ga0311342_102025223	3300029955	Bog	VNLWRKLAYLVLAIIMCASAAANWLAPAGYSRQYREATDA
Ga0302274_101277881	3300030041	Bog	VNLWRKLAYLVLAIIMCASAAANWLAPAGYSRQYRE
Ga0302195_101508581	3300030051	Bog	MSLGRKLALAVLMLVLSAAAAANWLAPAGYAKQYR
Ga0302176_102844261	3300030057	Palsa	MSAGRRVACAVLLLVAGVSLAANWLAPGGYAKQYREATDAPPSRQ
Ga0302179_101556972	3300030058	Palsa	MKLVRKSACVVLFLLVGASLAANWLAPAGYARQYREEANAAPSRGHWLGTDED
Ga0311354_110577862	3300030618	Palsa	MKLVRKSACVVLFLLVGASLAANWLAPAGYARQYREEANAAPSRGHWLGT
Ga0311354_117097592	3300030618	Palsa	MSLWRKLACGILALVLGAALAANWLAPAGYAKQYR
Ga0075405_108681412	3300030847	Soil	MKFARTNLWRTLACAVLLLVVGASLAANWLAPAGYAKQYREAADAAPSHEHWLG
Ga0170824_1229156792	3300031231	Forest Soil	MSLWRIGNWRKNFWRNLACAVLLLVVCISLAANWLAPA
Ga0302324_1015505902	3300031236	Palsa	MTAWRRFACAALLLVVSVSLAANWLAPGGYARQYREVAGAPPSAA
Ga0265325_103722721	3300031241	Rhizosphere	MNLWRTNFWRKVACGVLLLVVSLSLAAGWLAPGGYAKQYRA
Ga0265340_105425501	3300031247	Rhizosphere	MKLWRINVWRSLACAVLLLVVSVSLAANWLAPAGYAKQYREAAGAPPSHQ
Ga0170818_1089729092	3300031474	Forest Soil	MKLDRTNIWRALACAVLLLVVSVSLAANWLSPAGYAKQYR
Ga0170818_1148215121	3300031474	Forest Soil	MRLGHIGIWRALACAVLLLVVSMSLAAKWLVPAGYAKQYREAADAAPSRQH
Ga0302326_114225921	3300031525	Palsa	VNLWRKLAYLVLAIIMCASAAANWLAPAGYSRQYR
Ga0318555_106702701	3300031640	Soil	MSFWRRVACVLLLLVVGVSLAANWLAPAGYAKQYREAAGAP
Ga0310686_1050308092	3300031708	Soil	MSFWRKLACVALVLVLGASVAANWLAPASYAKQFRDATNAAPSR
Ga0265314_102650851	3300031711	Rhizosphere	MKLWRINVWRSLACAVLLLVVSVSLAANWLAPAGYAKQYREAAGAPPSHQHWL
Ga0265342_106083581	3300031712	Rhizosphere	MSLWRTNFWRKVACGILLLVASLSLAAGWLAPGGYA
Ga0307476_100147344	3300031715	Hardwood Forest Soil	MSLGRKLACVVLALMLGASAAATWLAPAGYSRQYREVTNAPPSRTHWLGTD
Ga0307476_112894261	3300031715	Hardwood Forest Soil	MRIPLNTGRTNFWRGFACAVLLIVVSVSLAANWLAPAGYAKQYREAA
Ga0307474_103240833	3300031718	Hardwood Forest Soil	MRIPPINARHTNFWRGFACAVLLIVVSVSLAANWLAPGGYAKQYR
Ga0307474_110740841	3300031718	Hardwood Forest Soil	MNLWRNMSLWRKLSYAVLALVLAASMAANWLAPAGYARQ
Ga0307474_114629431	3300031718	Hardwood Forest Soil	MSHGQKLACAILVLVVGASATATWLAPAGYARQYRD
Ga0307477_103073652	3300031753	Hardwood Forest Soil	MKAWRIVALVVLLLVVGVSVAANWLAPAGYARQYRDAVGAPPSHQHWL
Ga0307477_108757432	3300031753	Hardwood Forest Soil	VSFWRKLACVLLMLALGASAAANWLAPAGYAKQYRDATDAPPSRDHWLGTDEIG
Ga0307478_116429182	3300031823	Hardwood Forest Soil	MNFWRKVACVVLALALGASLAANWLAPAGYAKQYRATTNAPP
Ga0308175_1026204162	3300031938	Soil	MKVWRRVACAVLLLVLGMSLCAKLVAPGGYARQYRETADAP
Ga0306922_104197401	3300032001	Soil	MSFWRRVACVLLLLVVGVSLAANWLAPAGYAKQYR
Ga0306924_111627562	3300032076	Soil	MSFWRRVACVLLLLVVGVSLAADWLAPAGYAKQYREAAGAP
Ga0311301_114238482	3300032160	Peatlands Soil	MSLWRGVAIAVLLLVVGVSVAAPWLAPAGYARQYREAASASPS
Ga0310812_105219232	3300032421	Soil	MKIWRRVACAVLLLVVGVSLCATFVAPAGYARQYREAADAPPSRQHW
Ga0335085_111793362	3300032770	Soil	MSASANLWRWVACAVLLLVVSASLAAGWLAPAGYSKQYREAADAAPSRQHWLGTDD
Ga0335082_108950442	3300032782	Soil	MNFWRKFACAVLMLVFAVSLAATWLAPAGYAKQDR
Ga0335078_105203553	3300032805	Soil	MTIWRRVACAVLLLVAGVSLAANWVAPAGYAKEYRDAPDAAPSHAHWLGTD
Ga0335080_100622271	3300032828	Soil	MSTFRANFWRIAACVVLLLVVGVSLSANWLAPGGYARQYREAA
Ga0335080_110006142	3300032828	Soil	MSLWHKLAFAVVLLVVGVSLAANWLAPAGYAKQDREAVSAPP
Ga0335075_114492681	3300032896	Soil	MRLGRILSCAVLALVLGASLAANWLAPRGYAKQYREAI
Ga0335072_100946683	3300032898	Soil	MTIWRRVACAVLLLVAGVSLAANWVAPAGYAKEYRDA
Ga0335076_107762341	3300032955	Soil	MRSPANLWRWVACGVLLLVLSASLAAGWLAPAGYSKQYREAADA
Ga0335077_103948141	3300033158	Soil	MNLWRKIALAALLCVAGVALTANFWAPQGYAKQYREVADAQPSRAHWLGTDEIG

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign