Metagenome / Metatranscriptome Family F043548

Basic Information
Family ID	F043548
Family Type	Metagenome / Metatranscriptome
Number of Sequences	156
Average Sequence Length	65 residues
Representative Sequence	MVRLHVDKAGRRHVFAHARDLYEGSRISVHYAAKFKCIGSGSRKLFDPRPNERQRFKLPNSLLEE
Number of Associated Samples	122
Number of Associated Scaffolds	156

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	4.90 %
% of genes near scaffold ends (potentially truncated)	76.92 %
% of genes from short scaffolds (< 2000 bps)	79.49 %
Associated GOLD sequencing projects	116
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.30

Most Common Taxonomy
Group	Unclassified (59.615 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (13.462 % of family members)
Environment Ontology (ENVO)	Unclassified (40.385 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.077 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.35% β-sheet: 8.60% Coil/Unstructured: 72.04%
Feature Viewer

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Pfam ID	Name	% Frequency in 156 Family Scaffolds
PF02518	HATPase_c	10.90
PF02873	MurB_C	5.77
PF07719	TPR_2	3.85
PF08448	PAS_4	1.92
PF00856	SET	1.28
PF01909	NTP_transf_2	1.28
PF07690	MFS_1	1.28
PF08447	PAS_3	1.28
PF01061	ABC2_membrane	0.64
PF08245	Mur_ligase_M	0.64
PF06823	DUF1236	0.64
PF02656	DUF202	0.64
PF00593	TonB_dep_Rec	0.64
PF00330	Aconitase	0.64
PF02875	Mur_ligase_C	0.64
PF09140	MipZ	0.64
PF00484	Pro_CA	0.64
PF07883	Cupin_2	0.64
PF10431	ClpB_D2-small	0.64
PF00515	TPR_1	0.64
PF00248	Aldo_ket_red	0.64
PF00589	Phage_integrase	0.64
PF12146	Hydrolase_4	0.64
PF02586	SRAP	0.64
PF09722	Xre_MbcA_ParS_C	0.64
PF07238	PilZ	0.64
PF02698	DUF218	0.64
PF10027	DUF2269	0.64
PF00155	Aminotran_1_2	0.64
PF02423	OCD_Mu_crystall	0.64
PF06904	Extensin-like_C	0.64
PF06441	EHN	0.64

COG ID	Name	Functional Category	% Frequency in 156 Family Scaffolds
COG0812	UDP-N-acetylenolpyruvoylglucosamine reductase	Cell wall/membrane/envelope biogenesis [M]	5.77
COG0288	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	0.64
COG0596	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold	Coenzyme transport and metabolism [H]	0.64
COG1192	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	Cell cycle control, cell division, chromosome partitioning [D]	0.64
COG1434	Lipid carrier protein ElyC involved in cell wall biogenesis, DUF218 family	Cell wall/membrane/envelope biogenesis [M]	0.64
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.64
COG2149	Uncharacterized membrane protein YidH, DUF202 family	Function unknown [S]	0.64
COG2423	Ornithine cyclodeaminase/archaeal alanine dehydrogenase, mu-crystallin family	Amino acid transport and metabolism [E]	0.64
COG2949	Uncharacterized periplasmic protein SanA, affects membrane permeability for vancomycin	Cell wall/membrane/envelope biogenesis [M]	0.64
COG3921	Uncharacterized conserved protein, contains Extensin-like_C domain	Function unknown [S]	0.64

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.62 %
All Organisms	root	All Organisms	40.38 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.62 %
cellular organisms	root	All Organisms → cellular organisms	40.38 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.62 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	40.38 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.62 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	33.97 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.62 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	30.77 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.62 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	21.79 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.62 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5.13 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	2.56 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	1.92 %
Hyphomicrobiales incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis	0.64 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.64 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.62 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5.13 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	1.92 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	1.28 %
Nordella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Nordella	0.64 %
Rhizobiales bacterium GAS113	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS113	0.64 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.62 %
Bradyrhizobium diazoefficiens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	4.49 %
Methylobacterium oryzihabitans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → Methylobacterium oryzihabitans	1.92 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.64 %
unclassified Nordella	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Nordella → unclassified Nordella	0.64 %
Rhizobiales bacterium GAS113	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS113	0.64 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.62 %
Bradyrhizobium diazoefficiens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	4.49 %
Methylobacterium oryzihabitans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → Methylobacterium oryzihabitans	1.92 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.64 %
Nordella sp. HKS 07	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Nordella → unclassified Nordella → Nordella sp. HKS 07	0.64 %
Rhizobiales bacterium GAS113	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS113	0.64 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.64 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10089750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1399	Open in IMG/M
3300001471\|JGI12712J15308_10053589	All Organisms → cellular organisms → Bacteria	1023	Open in IMG/M
3300004152\|Ga0062386_101716536	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300004479\|Ga0062595_102292018	Not Available	532	Open in IMG/M
3300005330\|Ga0070690_100334427	Not Available	1095	Open in IMG/M
3300005535\|Ga0070684_101367547	Not Available	667	Open in IMG/M
3300005538\|Ga0070731_10012161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6268	Open in IMG/M
3300005541\|Ga0070733_10676727	Not Available	692	Open in IMG/M
3300005591\|Ga0070761_10251317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Nordella → unclassified Nordella → Nordella sp. HKS 07	1056	Open in IMG/M
3300005615\|Ga0070702_100825246	Not Available	719	Open in IMG/M
3300005764\|Ga0066903_101569967	Not Available	1246	Open in IMG/M
3300005764\|Ga0066903_104738615	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300005764\|Ga0066903_105580955	Not Available	662	Open in IMG/M
3300006173\|Ga0070716_101815779	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300006893\|Ga0073928_10665370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	729	Open in IMG/M
3300007982\|Ga0102924_1000090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	104278	Open in IMG/M
3300007982\|Ga0102924_1001088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	32055	Open in IMG/M
3300009101\|Ga0105247_11019190	Not Available	648	Open in IMG/M
3300009518\|Ga0116128_1094024	Not Available	891	Open in IMG/M
3300009519\|Ga0116108_1100141	Not Available	878	Open in IMG/M
3300009520\|Ga0116214_1280618	Not Available	636	Open in IMG/M
3300009521\|Ga0116222_1392735	Not Available	603	Open in IMG/M
3300009525\|Ga0116220_10431721	Not Available	592	Open in IMG/M
3300009551\|Ga0105238_12082037	Not Available	602	Open in IMG/M
3300009623\|Ga0116133_1096522	Not Available	749	Open in IMG/M
3300009629\|Ga0116119_1040174	Not Available	1232	Open in IMG/M
3300009630\|Ga0116114_1074501	Not Available	927	Open in IMG/M
3300009634\|Ga0116124_1209154	Not Available	542	Open in IMG/M
3300009638\|Ga0116113_1031403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1197	Open in IMG/M
3300009640\|Ga0116126_1225361	Not Available	595	Open in IMG/M
3300009641\|Ga0116120_1257507	Not Available	547	Open in IMG/M
3300009643\|Ga0116110_1073401	Not Available	1192	Open in IMG/M
3300009824\|Ga0116219_10333008	Not Available	852	Open in IMG/M
3300009824\|Ga0116219_10454497	Not Available	711	Open in IMG/M
3300009824\|Ga0116219_10698020	Not Available	555	Open in IMG/M
3300009826\|Ga0123355_11055883	Not Available	853	Open in IMG/M
3300010049\|Ga0123356_10280687	All Organisms → cellular organisms → Bacteria → Proteobacteria	1760	Open in IMG/M
3300010379\|Ga0136449_100531175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2030	Open in IMG/M
3300010379\|Ga0136449_101724094	All Organisms → cellular organisms → Bacteria → Proteobacteria	942	Open in IMG/M
3300010379\|Ga0136449_101780801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	923	Open in IMG/M
3300010379\|Ga0136449_102319097	Not Available	777	Open in IMG/M
3300010379\|Ga0136449_103067536	Not Available	650	Open in IMG/M
3300010379\|Ga0136449_104084606	Not Available	543	Open in IMG/M
3300012984\|Ga0164309_10225427	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1306	Open in IMG/M
3300014156\|Ga0181518_10061683	Not Available	2198	Open in IMG/M
3300014158\|Ga0181521_10050370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2878	Open in IMG/M
3300014164\|Ga0181532_10786620	Not Available	510	Open in IMG/M
3300014165\|Ga0181523_10122550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	1547	Open in IMG/M
3300014199\|Ga0181535_10581384	Not Available	643	Open in IMG/M
3300014200\|Ga0181526_10041752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2939	Open in IMG/M
3300014200\|Ga0181526_10634520	Not Available	675	Open in IMG/M
3300014201\|Ga0181537_10974775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	574	Open in IMG/M
3300014493\|Ga0182016_10004344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	15750	Open in IMG/M
3300014501\|Ga0182024_12076934	Not Available	626	Open in IMG/M
3300014657\|Ga0181522_10007383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5913	Open in IMG/M
3300014657\|Ga0181522_10395982	Not Available	826	Open in IMG/M
3300015371\|Ga0132258_13093367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1150	Open in IMG/M
3300015372\|Ga0132256_102499453	Not Available	618	Open in IMG/M
3300015372\|Ga0132256_103408682	Not Available	534	Open in IMG/M
3300015373\|Ga0132257_100414072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1640	Open in IMG/M
3300016387\|Ga0182040_11784540	Not Available	526	Open in IMG/M
3300016750\|Ga0181505_10338560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	681	Open in IMG/M
3300017940\|Ga0187853_10366964	Not Available	641	Open in IMG/M
3300017942\|Ga0187808_10600568	Not Available	511	Open in IMG/M
3300017943\|Ga0187819_10711037	Not Available	566	Open in IMG/M
3300017946\|Ga0187879_10176043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1204	Open in IMG/M
3300017959\|Ga0187779_11078974	Not Available	560	Open in IMG/M
3300017961\|Ga0187778_10440230	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300017966\|Ga0187776_11077304	Not Available	595	Open in IMG/M
3300017970\|Ga0187783_10688434	Not Available	738	Open in IMG/M
3300017972\|Ga0187781_10464475	All Organisms → cellular organisms → Bacteria → Proteobacteria	907	Open in IMG/M
3300017972\|Ga0187781_10475065	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	896	Open in IMG/M
3300017972\|Ga0187781_10992375	Not Available	614	Open in IMG/M
3300017973\|Ga0187780_11349017	Not Available	525	Open in IMG/M
3300017973\|Ga0187780_11366813	Not Available	522	Open in IMG/M
3300017975\|Ga0187782_11287521	Not Available	573	Open in IMG/M
3300018001\|Ga0187815_10060157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1599	Open in IMG/M
3300018008\|Ga0187888_1096539	Not Available	1264	Open in IMG/M
3300018017\|Ga0187872_10296511	Not Available	708	Open in IMG/M
3300018020\|Ga0187861_10258334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	757	Open in IMG/M
3300018021\|Ga0187882_1379565	Not Available	537	Open in IMG/M
3300018022\|Ga0187864_10125579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1299	Open in IMG/M
3300018022\|Ga0187864_10437964	Not Available	557	Open in IMG/M
3300018023\|Ga0187889_10361010	Not Available	633	Open in IMG/M
3300018040\|Ga0187862_10822239	Not Available	537	Open in IMG/M
3300018057\|Ga0187858_10507145	Not Available	737	Open in IMG/M
3300018057\|Ga0187858_10643882	Not Available	636	Open in IMG/M
3300018062\|Ga0187784_11263130	Not Available	585	Open in IMG/M
3300018085\|Ga0187772_11128323	Not Available	576	Open in IMG/M
3300018086\|Ga0187769_11506524	Not Available	509	Open in IMG/M
3300018090\|Ga0187770_10327985	All Organisms → cellular organisms → Bacteria	1194	Open in IMG/M
3300018090\|Ga0187770_10534256	Not Available	929	Open in IMG/M
3300019082\|Ga0187852_1240315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	735	Open in IMG/M
3300020579\|Ga0210407_10091006	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2308	Open in IMG/M
3300020579\|Ga0210407_11207430	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300020583\|Ga0210401_10489046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1093	Open in IMG/M
3300021168\|Ga0210406_10166605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1843	Open in IMG/M
3300021170\|Ga0210400_10150445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1875	Open in IMG/M
3300021170\|Ga0210400_10193377	Not Available	1652	Open in IMG/M
3300021171\|Ga0210405_10050709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3284	Open in IMG/M
3300021404\|Ga0210389_11113020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	610	Open in IMG/M
3300021406\|Ga0210386_11376166	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	592	Open in IMG/M
3300021407\|Ga0210383_11490610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS113	560	Open in IMG/M
3300021477\|Ga0210398_11389845	Not Available	549	Open in IMG/M
3300021478\|Ga0210402_10013209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7086	Open in IMG/M
3300021479\|Ga0210410_11134257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	672	Open in IMG/M
3300021559\|Ga0210409_10003710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	16830	Open in IMG/M
3300024225\|Ga0224572_1085217	Not Available	583	Open in IMG/M
3300025444\|Ga0208189_1006941	All Organisms → cellular organisms → Bacteria → Proteobacteria	3059	Open in IMG/M
3300025460\|Ga0208562_1054210	Not Available	862	Open in IMG/M
3300025898\|Ga0207692_11146985	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300025911\|Ga0207654_11335461	Not Available	523	Open in IMG/M
3300025916\|Ga0207663_11591009	Not Available	526	Open in IMG/M
3300025918\|Ga0207662_10562636	Not Available	790	Open in IMG/M
3300025945\|Ga0207679_10899544	Not Available	810	Open in IMG/M
3300027064\|Ga0208724_1016905	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	721	Open in IMG/M
3300027855\|Ga0209693_10274218	Not Available	825	Open in IMG/M
3300028800\|Ga0265338_10408691	Not Available	966	Open in IMG/M
3300028906\|Ga0308309_11061164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	701	Open in IMG/M
3300031057\|Ga0170834_107103558	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300031231\|Ga0170824_120524842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	646	Open in IMG/M
3300031525\|Ga0302326_13329504	Not Available	539	Open in IMG/M
3300031546\|Ga0318538_10014976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3330	Open in IMG/M
3300031708\|Ga0310686_102036379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → Methylobacterium oryzihabitans	1170	Open in IMG/M
3300031708\|Ga0310686_103448376	Not Available	540	Open in IMG/M
3300031708\|Ga0310686_118860810	Not Available	589	Open in IMG/M
3300031890\|Ga0306925_11600379	Not Available	633	Open in IMG/M
3300031945\|Ga0310913_10586606	Not Available	791	Open in IMG/M
3300032001\|Ga0306922_10749902	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → Methylobacterium oryzihabitans	1024	Open in IMG/M
3300032055\|Ga0318575_10101137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1398	Open in IMG/M
3300032160\|Ga0311301_10033454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	13040	Open in IMG/M
3300032160\|Ga0311301_10628174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1537	Open in IMG/M
3300032783\|Ga0335079_10498446	All Organisms → cellular organisms → Bacteria → Proteobacteria	1299	Open in IMG/M
3300032828\|Ga0335080_10395710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1483	Open in IMG/M
3300032892\|Ga0335081_10071997	Not Available	5280	Open in IMG/M
3300032898\|Ga0335072_11431452	Not Available	595	Open in IMG/M
3300033134\|Ga0335073_11081589	Not Available	819	Open in IMG/M
3300033134\|Ga0335073_12115022	Not Available	509	Open in IMG/M
3300033158\|Ga0335077_10202000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2234	Open in IMG/M
3300033158\|Ga0335077_10745933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → Methylobacterium oryzihabitans	1003	Open in IMG/M
3300033158\|Ga0335077_11113709	Not Available	779	Open in IMG/M
3300033158\|Ga0335077_12176874	Not Available	510	Open in IMG/M
3300033887\|Ga0334790_033917	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2073	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.67%
Host-Associated	Host-Associated	8.33%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	64.10%
Aquatic	Environmental → Aquatic	27.56%
Plants	Host-Associated → Plants	6.41%
Arthropoda	Host-Associated → Arthropoda	1.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	62.82%
Freshwater	Environmental → Aquatic → Freshwater	25.64%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.13%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.92%
Digestive System	Host-Associated → Arthropoda → Digestive System	1.92%
Peat	Environmental → Terrestrial → Peat	1.28%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.28%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	32.69%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	25.64%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	19.87%
Loam	Environmental → Terrestrial → Soil → Loam	10.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.56%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.56%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.92%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	1.92%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.28%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.28%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	17.95%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	16.67%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	16.03%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.38%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	7.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.49%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.56%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.92%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.92%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.92%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	1.92%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.28%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.28%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.64%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.46%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	10.90%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	10.26%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	8.97%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	7.69%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	7.05%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	6.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.85%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.56%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.56%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.92%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.92%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	1.92%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.28%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.28%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.28%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.28%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.28%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.28%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.28%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.64%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.64%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.64%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.64%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.64%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.64%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.64%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.64%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.64%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.64%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009518	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150	Environmental	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009629	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_100	Environmental	Open in IMG/M
3300009630	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40	Environmental	Open in IMG/M
3300009634	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150	Environmental	Open in IMG/M
3300009638	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10	Environmental	Open in IMG/M
3300009640	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40	Environmental	Open in IMG/M
3300009641	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150	Environmental	Open in IMG/M
3300009643	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300010049	Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3	Host-Associated	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018021	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019082	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300024225	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5	Host-Associated	Open in IMG/M
3300025444	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40 (SPAdes)	Environmental	Open in IMG/M
3300025460	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150 (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027064	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF003 (SPAdes)	Environmental	Open in IMG/M
3300027662	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033887	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_100897502	3300000567	Peatlands Soil	MVRLHVNKAGRRHVYTHARELYEGSRLSVHYAAKFKCVGSGSRKLFDPRPNERQRFKLPSSLLEQ*
JGI12712J15308_100535891	3300001471	Forest Soil	PIATQCPICQQMVRLHVDKAGRRHVFAHARGLYEGSRFRVHYAAKMRCVGSGAQTMFDPRPDEHQSFKLPRSLVDES*
Ga0062386_1017165361	3300004152	Bog Forest Soil	VNKAGRRHMFAHARSLYEGSRFSVHYAANVKCVGSDSPKRFDPRPSERQSFKLPGSLLDEQ*
Ga0062595_1022920181	3300004479	Soil	RRHVFRHARTLYEGSRLRVHYTAEMKCVGSGTFKMFDPRPNEPQRFKLPDILLDD*
Ga0070690_1003344272	3300005330	Switchgrass Rhizosphere	CKQMVRLHVDKAGRRHVFRHARTLYEGSRLRVHYTAEMKCVGSGTYKMFDPRPNEPQRFKLPDILLDD*
Ga0070684_1013675472	3300005535	Corn Rhizosphere	CKQMVRLHVDKAGRRHVFRHARTLYEGSRLRVHYTAEMKCVGSGTFKMFDPRPNEPQRFKLPDILLDD*
Ga0070731_1001216110	3300005538	Surface Soil	QCPICQQMVRLHVNKAGRQHVYGHARDLYEGSRLSVHYAADMKCVGSGSRKLFDPHPNEHQHFKLPNTLIEK*
Ga0070733_106767272	3300005541	Surface Soil	QCPICQQMVRLHVDQAGRRHAIAHARSLYEGSRFGVHYAAAAKCVGSGAPKVFHPRPNEPQRFKLPNTLLEK*
Ga0070761_102513172	3300005591	Soil	LHPIATQCPICQQMVRLHVDKAGRRHVFAHARGLYEGSRFGVHYAAKMKCVGSGAQTMFDPRPNEHQSFNLPRSLLDES*
Ga0070702_1008252461	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	RLHPVVTQCPMCKQMVRLHVDKAGRRHVFRHARTLYEGSRLRVHYTAEMKCVGSGTYKMFDPRPNEPQRFKLPDILLDD*
Ga0066903_1015699671	3300005764	Tropical Forest Soil	TQCPICQQTVRLHVNKAGRRHVFTHARSLYEGCRLCVHFVAEVKCLGSGTVMTFDPHPDEHQRFKLPDSLLEE*
Ga0066903_1047386151	3300005764	Tropical Forest Soil	TPCPICKQMVRLHVDKAGRRHVFRHARTLYEGSRLRVHYTAEMKCVGSGTFKMFDPRPNELQRFKLPDILLDD*
Ga0066903_1055809551	3300005764	Tropical Forest Soil	TQCPICQQTVRLHVNKAGRRHVFTHARSLYEGCRLCVHFVARVKCLGSGTVMTFDPRPDEHQRFKLPDSLLEE*
Ga0080026_101434021	3300005952	Permafrost Soil	ARGLYEGSRFGVHYAAKMRCDGSGAQTMFDPRPNEHQSFNLPRSLVDES*
Ga0070716_1018157792	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	HVYGHARELYAGARLSVHYTAEAKCVGSGAHKPFDPRPTEHQHFKLPNSLLEE*
Ga0073928_106653701	3300006893	Iron-Sulfur Acid Spring	ICQQMVRLHVNKAGRRHVFAHARGLYEGSRFGVHYAAKMRSDGSGAQTMFDPRPNEHQSFNLPRSLVDES*
Ga0102924_100009042	3300007982	Iron-Sulfur Acid Spring	MIRLHVNKAGRRHVFAHARVLYEGSRYRVHYAAKIRCLGSGVPAKFDPRPNEGQHFKLPRSLLED*
Ga0102924_100108833	3300007982	Iron-Sulfur Acid Spring	MVRLHVDKAGRRHVFAHARALYEGSRFSLHYAAKIKCTGSGDPKLFDPRPNEHQRFKLPNSLLEE*
Ga0105247_110191902	3300009101	Switchgrass Rhizosphere	MCKQMVRLHVDKAGRRHVFQHAHTLYEGSRLRVHYTAKMKCISSSTFKMFDPRPNE
Ga0116128_10940241	3300009518	Peatland	MVRLHVDKAGRRHVFAHARDLYEGSRISVHYAAKFKCIGSGSRKLFDPRPNERQRFKLPNSLLEQ*
Ga0116108_11001412	3300009519	Peatland	MVRLHVDKAGRRHVFAHARDLYEGSRISVHYAAKFKCIGSGSRKLFDPRPNERQRFKLPNSLLEE*
Ga0116214_12806182	3300009520	Peatlands Soil	ATQCPICQQMVRLHVNKAGRRHVFAHARGLYEGSRFDVHYAAKMRCVGSGAQTMFDPRPNEHQSFNLPRSLVDES*
Ga0116222_13927352	3300009521	Peatlands Soil	VRLHVNKAGRRHVFAHARGLYEGSRFDVHYAAKMRCVGSGAQTMFDPRPNEHQSFNLPRSLLDES*
Ga0116220_104317211	3300009525	Peatlands Soil	GRRHVFAHARGLYEGSRFGVHYAAKMRCVGSGAQTMFDPRPNEHQNFKLPRSLLDES*
Ga0105238_120820372	3300009551	Corn Rhizosphere	KQMVRLHVDKAGRRHVFRHARTLYEGSRLRVHYTAEMKCVGSGTFKMFDPRPNEPQRFKLPDILLDD*
Ga0116133_10965221	3300009623	Peatland	VCQQMVRLHVDKAGRRHVFAHARELYEGSRISVHYAAKFKCIGSGSRKLFDPRPNERLRFKLPNSLLEE*
Ga0116119_10401741	3300009629	Peatland	HVFAHARELYEGSRFSVHYAAKFKCVGSGSRKLFDPRPNERQRFKLPNPLLEE*
Ga0116114_10745011	3300009630	Peatland	MVRLHVNKAGRRHAFAHARALYEGSKIPVHYAADVKCTGSESLKRFDPRPNEHQRFKLPSSLLEG
Ga0116124_12091541	3300009634	Peatland	MVRLHVDKAGRRHVFAHARELYEGSRISVHYAAKFKCIGSGSRKLFDPRPNERQRFKLPNSLLNE*
Ga0116113_10314032	3300009638	Peatland	MVRLHVDKAGRRHVFAHARALYEGSRYGVHYASEIRCVGSGNLAQFDPRPNEHQRFKLPNALLEE*
Ga0116126_12253613	3300009640	Peatland	RRHVFAHARELYQGSRLSAHYAANFKCVGSGSRKLFDPRPNERQRFKLPNSLLEE*
Ga0116120_12575071	3300009641	Peatland	CRQMVRLHVNKAGRRHVFAHARELYEGSRFSVHYAAKFKCVGSGSRKLFDPRPNERQRFKLPNPLLEE*
Ga0116110_10734011	3300009643	Peatland	KAGRRHVFAHARGLYEGSRFDVHYAAKMRCGGSGAQTMFDPRPNEHQNFKLPRSLLDES*
Ga0116219_103330082	3300009824	Peatlands Soil	MVRLHVNKAGRRHAFAHARALYEGSKIPVHYAADVKCTGSESLKRFDPRPNEHQRFKLPSSLLEGQ*
Ga0116219_104544971	3300009824	Peatlands Soil	MVRLHVNQAGRRHVFAHARELYQGSRLSAHYAANFKCVGSGSRKLFDPRPNERQRFKLPNSLLNE*
Ga0116219_106980202	3300009824	Peatlands Soil	PLVAQCPVCRQMVRLHVNKAGRRHVFAHARELYEGSRFSVHYAAKFKCVGSGSRKLFDPRPNERQRFKLPNPLLEE*
Ga0123355_110558831	3300009826	Termite Gut	HPVVTECPFCHQMVRLHVNKAGRQHMYAHARELYEGSRLSDHYAAKVKCVGSGSPKAFDPHPNEHLHFKLPSSLRDE*
Ga0123356_102806871	3300010049	Termite Gut	RLYPVVTECPFCHQMVRLHVNKAGRRHMYAHARELYEDSRLSEHYTAKVKCVGSGSPKVFDPHPNEHLRFKLPSSLRDE*
Ga0123356_114436082	3300010049	Termite Gut	YAHARELYEGSRLSDHYAAKVKCVGSGSPKAFDPHPNEHLHFKLPSSLRDE*
Ga0136449_1005311751	3300010379	Peatlands Soil	PIATQCPICQQMVRLHVNKAGRRHVFAHARGLYEGSRFGVHYAAKMRCVGSGAQTMFDPRPNEHQNFKLPRSLLDES*
Ga0136449_1017240941	3300010379	Peatlands Soil	HPLVAKCPVCQQMVRLHVNKAGRRHVFAHARELYEGSRFSVHYATKFKCVGSGGIKRFDPRPNERQRFKLPNSLLEE*
Ga0136449_1017808013	3300010379	Peatlands Soil	DKAGRRHVFAHARGLYEGSRFGVHYAAKMKCVGSGAQTMFDPRPNERQSFKLPRSLLDES
Ga0136449_1023190971	3300010379	Peatlands Soil	PIATQCPICQQMVRLHVDKAGRRHVFAHARGLYEGSRFGVHYAAKMRCVGSGAQTMFDPRPNEHQSFNLPRSLLDES*
Ga0136449_1030675361	3300010379	Peatlands Soil	RRHVFAHARDLYEGSRISVHYAAKFKCIGSGSRKLFDPRPNERQRFKLPNSLLEQ*
Ga0136449_1040846062	3300010379	Peatlands Soil	PIATQCPICQQMVRLHVDKAGRRHVFAHARGLYEGSRFGVHYAAKMRCVGSGAQTMFDPRPNEHQNFKLPRSLLDES*
Ga0164309_102254272	3300012984	Soil	MVRLHVDKAGRQHVFGHARTLYEGSRLRVHYTAKIKCVGSGALKMFDPRPNEPQRFKLPHTLLEE*
Ga0181518_100616831	3300014156	Bog	LHVNKAGRRHVFAHARGLYEGSRFDVHYAAKMRCGGSGAQTMFDPRPNEHQNFKLPRSLLDES*
Ga0181521_100503701	3300014158	Bog	MVRLHVNKAGRRHVFAHARGLYEGSRFDVHYAAKMRCGGSGAQTMFDPRPNEHQNFKLPRSLLDES*
Ga0181532_107866201	3300014164	Bog	ATQCPICQQMVRLHVNKAGRRHVFAHARGLYEGSRFDVHYAAKMRCVGSGAQTMFDPRPNEHQNIKLPRSLLDES*
Ga0181523_101225502	3300014165	Bog	MVRLHVNKAGRRHVYGHARELYAGAQISVHYAANMKCVGSGSRKLFDPRPNEHQHFKLPNSLLEK*
Ga0181535_105813843	3300014199	Bog	MVRLRVDMAGRRHVFAHARDLYEGSRISVHYAAKFKCIGSGSRKLFDPRPNERQRFKLPNSLLEQ*
Ga0181526_100417525	3300014200	Bog	HVNKAGRRHVFAHARGLYEGSRFDVHYAAKMRCGGSGAQTMFDPRPNEHQNFKLPRSLLDES*
Ga0181526_106345202	3300014200	Bog	MVRLHVDMAGRRHVFAHARDLYEGSRISVHYAAKFKCIGSGSRKLFDPRPNERQRFKLPNSLLEQ*
Ga0181537_109747752	3300014201	Bog	MVRLHVNKAGRRHVFAHARALYEGSRYGVHYASEIRCVGSGNLAQFDPRPNEHQRFKLPSALAEE*
Ga0182016_1000434413	3300014493	Bog	MVRLHVDKAGRRHVFAHARALYEGSRYGVHYASEIRCVGSGNLAQFDPRPNEHQRFKLPSALLEE*
Ga0182024_120769341	3300014501	Permafrost	MVRLHVDKAGRRHVFAHARALYEGSRYGVHYAAEIRCLGSGHLAQFDPRPNEHQRFKLPNSLLEK*
Ga0181522_100073839	3300014657	Bog	MVRLHVNKAGRRHVYGHARELYEGAQLSVHYAANTKCDGSGSRKLFDPHPNERQHFKLPNSLAEK*
Ga0181522_103959822	3300014657	Bog	MCQQMVRLHVDKAGRRHVYGHARELYEDARLSVHYAADMKCVGSGSRKLFDPHPNEHQHFKLPNSLLEK*
Ga0132258_130933671	3300015371	Arabidopsis Rhizosphere	MCKQMVRLHVDKAGRRHVFRHARTLYEGSRLRVHYTEEMKCVGSGTFKMFDPRPNEPQRFKLPDILLDD*
Ga0132256_1024994531	3300015372	Arabidopsis Rhizosphere	MCKQMVRLHVDKAGRRHVFRHARTLYEGSRLRVHYTAEMKCVGSGTYKMFDPRPNEPQRF
Ga0132256_1034086821	3300015372	Arabidopsis Rhizosphere	LHVDKAGRRHVFRHARTLYEGSRLRVHYTEEMKCVGSGTFKMFDPRPNEPQRFKLPDILLDD*
Ga0132257_1004140722	3300015373	Arabidopsis Rhizosphere	MCGQRVQLHVNRAGRRHVFSHARGLYEGCRLCVHYVAKIKCLGSGSRPIFDPHPNERQRFKLPDLLVEK*
Ga0182040_117845401	3300016387	Soil	CPICQQTVHLHVNKAGRRHVFAHARGLYEGCRFCVHFVGSIKCLGSGMAIVFDPRPNEKQRFKLPDPLVEQD
Ga0181505_103385602	3300016750	Peatland	RLHPLVAQCPVCQQMVRLHVDKAGRRHVFAHARELYEGSRFSVHYAAKFKCIGSGNRKLFDPRPNERQRFKLPNSLLEG
Ga0187853_103669641	3300017940	Peatland	CQQMVRLHVNQAGRRHVFAHARELYQGSRLSVHYAANFKCVGSGSRKLFDPRPNERQRFKLPNSLLNE
Ga0187808_106005681	3300017942	Freshwater Sediment	HVFAHARELYEGSRFSVHYAAKFKCVGSGSRKLFDPRPNERQRFKLPNSLLEE
Ga0187819_107110371	3300017943	Freshwater Sediment	AGRRHVFAHARDLYEGSRISVHYAAKFKCIGSGSRKLFDPRPNERQRFKLPNSLLEQ
Ga0187879_101760431	3300017946	Peatland	CQQMVRLHVDKAGRRHVFAHARELYEGSRISVHYAAKFKCIGSGSRKLFDPRPNERLRFKLPNSLLEE
Ga0187779_110789741	3300017959	Tropical Peatland	AGRRHVFGHARSLYEGSRFSTHYATDMKCVASGSPKLFDPHPSERQHFKLPGGLLEE
Ga0187778_104402302	3300017961	Tropical Peatland	PICRQRVRLHVNKAGRRHVLAHARGLYEGCRLSVHYAAEFKCVGSGSLMIFDPRPDEHQRFNLPQSLREGR
Ga0187776_110773042	3300017966	Tropical Peatland	VRLHVNKAGRRHVFAHARALYEGSRLQVHYAANIRCVGSGAPKTFDPRPNEHQRFKLPDRLLDN
Ga0187783_106884341	3300017970	Tropical Peatland	QCPICQQMVRLHVNKAGRRHVYGHARDLYEGARLSVHYAADMKCVGSGSRKLFDPHPNEHQHFKLPNSLLEK
Ga0187781_104644751	3300017972	Tropical Peatland	RLHVNKAGRRHVFGHARALYEGSRLEPHYAAKARCVGSGAVKTFDPRPNEHQRFKLPDRLLD
Ga0187781_104750653	3300017972	Tropical Peatland	CHQAVRLHVNKAGRRHVFAHALALYEGSRISVHYVATFKCVGSGSPMLFNPRPQEHQHFKLPSLLEK
Ga0187781_107364261	3300017972	Tropical Peatland	DLYEGGRLSVHYAANMKCVGSGSRKLFDPHPNEHQHFKLPNSLLEK
Ga0187781_109923752	3300017972	Tropical Peatland	VRLHVDKAGRRHVYAHAHELYEGSRFAVHYTAKMKCVGSGSVKLFNPRPNEHQRFKLPNSLEK
Ga0187780_113490172	3300017973	Tropical Peatland	GQMVRLHVNKAGRRHVFAHARALYEGSQFSVHYAAKVKCAGSGNAKQFDPRPDEHQHFKLPSSLLDE
Ga0187780_113668132	3300017973	Tropical Peatland	HPITAQCPICHQMVRLHVNKAGRRHVLAHARALYEGARYSKHYAAGSIECSGSGSIKLFDPRPNEDQRFKLPNSLLEDGGLPLS
Ga0187782_107610041	3300017975	Tropical Peatland	ELYEGSRLSVHYAANMKCVGSGSPKPFDPHPNEHQHFKLPNSLLEK
Ga0187782_112875211	3300017975	Tropical Peatland	CPICRQMVRLHVNKAGRRHVFGHARALYEGSRLEPHYAAKARCVGSGAVKTFDPRPNEHQRFKLPDRLLD
Ga0187815_100601573	3300018001	Freshwater Sediment	MVRLHVNRAGRRHVFAHARELYEGSRLSIHYAAKFKCVGSGNPKLFDPRPNERQRFKLPNALLEE
Ga0187888_10965394	3300018008	Peatland	MVRLHVNKAGRRHAFAHARALYEGSKFSAHYAAKIKCTGSESLKRFDPRPNEHQRFKLPSSLLEG
Ga0187872_102965112	3300018017	Peatland	LVAQCPVCQQMVRLHVDKAGRRHVFAHARDLYEGSRISVHYAAKFKCIGSGSRKLFDPRPNERQRFKLPNSLLEQ
Ga0187861_102583342	3300018020	Peatland	PICQQMVRLHVNKAGRRHVFAHARGLYEGSRFDVHYAAKMRCGGSGAQTMFDPRPNEHQNFKLPRSLLDES
Ga0187882_13795652	3300018021	Peatland	PICQQMVRLHVNKAGRQHAFAHARALYQGSRFSVHYSANIKCVASDSSKRFDPRPNEHQEFKLPGSLLEE
Ga0187864_101255791	3300018022	Peatland	NKAGRRHAFAHARALYEESRVSVHYAAKMKCVGSHSLKRFDPRPNEHQHFKLPSSLLEE
Ga0187864_104379641	3300018022	Peatland	HVNKAGRRHVFTHARELYEGSRFSVHYAATFKCVGSGSRKLFDPRPNERLRFKLPNSLLE
Ga0187889_103610101	3300018023	Peatland	HPLVTQCPVCQQMVRLHVNQAGRRHVFAHARELYQGSRLSAHYAANFKCVGSGSRKLFDPRPNERQRFKLPNSLLNE
Ga0187862_108222391	3300018040	Peatland	VRLHVNKAGRRHAFQHARSLYEGSQFSEHYAASVKCIGSGRRKVFDPRPDEHQRFKLPSTLLEG
Ga0187858_105071451	3300018057	Peatland	CQQMVRLHVNKAGRRHVFAHARELYEGSRFSVHYAAKSECVGSGSRKVFDPRPTERQRFKLPNSLLEE
Ga0187858_106438821	3300018057	Peatland	HVDKAGRRHAFAHARALYEESRVSVHYAAKIKCLGSDSLKRFDPRPNEHQRFKLPSALLE
Ga0187784_112631302	3300018062	Tropical Peatland	RLHVDKAGRRHVYAHARELYAGSRLSVHYAANMKCVGSGSPKLFDPHPNERQHFKLPNSLLEK
Ga0187772_111283231	3300018085	Tropical Peatland	TQCPICQQMVRLHVNKAGRRHVFGHARSLYEGSRFSTHYATDMKCVASGSPKLFDPHPSERQHFKLPGGLLEE
Ga0187769_115065242	3300018086	Tropical Peatland	AQCPICGQMVRLHANKAGRRHVYAHANELYEGSRFAVHYSAKMKCVGSGSVKLFNPRPNEHQRFKLPNSLLEE
Ga0187770_103279852	3300018090	Tropical Peatland	PICRQTVRLHVNQAGRRHMFAHVRGLYEGSRFCEHYAAETRCGGSGALAAFDPRPNEHQRFKLPASLREE
Ga0187770_105342563	3300018090	Tropical Peatland	PICRQTVRLHVNQAGRRHMFAHVRGLYEGSRFCEHYAAETKCGGSGALAAFDPRPNEHQRFKLPASLREE
Ga0187852_12403151	3300019082	Peatland	CPVCQQMVRLHVNKAGRRHVFAHARELYEGSRISVHYAAKFKCVGSGSRKLFDPRPNERLRFKLPNSLLEE
Ga0210407_100910063	3300020579	Soil	HVDKAGRQHVFGHARTLYEGSRLRVHYTAKIKCVGSGALKMFDPRPNEPQRFKLPHTLLE
Ga0210407_112074302	3300020579	Soil	CQQMVRLHVNKAGRRHVFAHARGLYEGSRFGVHYAAKMKCVGSGAQTMFDPRPNEHQSFNLPRSLLDES
Ga0210401_104890461	3300020583	Soil	MVRLHVDKAGRRHVFAHARGLYEGSRFGVHYAAKMRCVGSGAQTMFDPRPNEHQSFNLPRSLADES
Ga0210406_101666052	3300021168	Soil	VDKAGRQHVFGHARTLYEGSRLRVHYTAKIKCVGSGALKMFDPRPNEPQRFKLPHTLLEE
Ga0210400_101504451	3300021170	Soil	HPVVTQCPICKQMVRLHVDKAGRQHVFGHARTLYEGSRLRVHYTAKIKCVGSGALKMFDPRPNEPQRFKLPHTLLEE
Ga0210400_101933772	3300021170	Soil	VRLHVNKAGRRHVFAHARGLYEGSRFGVHYAAKMRCVGSGAQTMFDPRPDEHQSFKLPRSLVDES
Ga0210405_100507091	3300021171	Soil	QCPICQQMVRLHVNKAGRRHVFAHARGLYEGSRFGVHYAAKMRCDGSGAQTMFDPRPNEHQSFNLPRSLLDES
Ga0210389_111130201	3300021404	Soil	RHVFAHARGLYEGSRFGVHYAAKMRCVGSGAQTMFDPRPNEHQSFNLPRSLLDES
Ga0210387_111681082	3300021405	Soil	RGLYEGSRFGVHYAAKMKCVGSGAQTMFDPRPNEHQSFNLPRSLLDES
Ga0210386_113761661	3300021406	Soil	EAGRRHVFAHARGLYEGSRFGVHYAAKMRCVGSGAQTMFDPRPNEHQSFNLPRSLLDES
Ga0210383_114906101	3300021407	Soil	ICQQMVRLHVNKAGRRHVFAHARGLYEGSRFGVHYAAKMRCVGSGAETMFDPRPNEHQSFNLPRSLLDES
Ga0210394_109519742	3300021420	Soil	HARGLYERSRFGVHYAAKMKCVGSGAQTMFDPRPNEHQSFNLPRSLLDES
Ga0210398_113898451	3300021477	Soil	MVRLHVNKAGRRHVFAHARELYGGSRLSEHYAAEMKCVGSGRPKPFDPHPNENQRFKLPNSLREE
Ga0210402_100132091	3300021478	Soil	QHVFGHARTLYEGSRLRVHYTAKIKCVGSGALKMFDPRPNEPQRFKLPHTLLEE
Ga0210410_111342571	3300021479	Soil	MVRLHVNKAGRRHVFAHARGLYEGSRFGVHYAAKMRCDGSGAQTMFDPRPNEHQSFNLPRSLVDES
Ga0210410_112704491	3300021479	Soil	ARGLYEGSRFGVHYAAKTRCDGSGAQTMFDPRPNEHQSFNLPRSLLDES
Ga0210409_1000371018	3300021559	Soil	DKAGRQHVFGHARTLYEGSRLRVHYTAKIKCVGSGALKMFDPRPNEPQRFKLPHTLLEE
Ga0224572_10852171	3300024225	Rhizosphere	KAGRRHVFAHARGLYEGSRFGVHYAAKMRCVGSGAQTMFDPRPNEHQSFNLPRSLVDES
Ga0208189_10069416	3300025444	Peatland	HPLVAQCPVCRQMVRLHVNKAGRRHVFAHARELYEGSRFSVHYAAKFKCVGSGSRKLFDPRPNERQRFKLPNPLLEE
Ga0208562_10542102	3300025460	Peatland	QCPVCQQMVRLHVNKAGRRHVFAHARELYEGSRFSVHYAAKFKCVGSGSRKLFDPRPNERLRFKLPNSLLEE
Ga0207692_111469852	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	HPITAQCPICRQMVRLHVNQAGRQHVYGHARELYAGARLSVHYTAEAKCVGSGAHKPFDPRPTEHQHFKLPNSLLEE
Ga0207654_113354612	3300025911	Corn Rhizosphere	MVRLHVDKAGRRHVFRHARTLYEGSRLRVHYTAEMKCVGSGTYKMFDPRPNEPQRFKLPDILLDD
Ga0207663_115910092	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	QCPICKQMVRLHVDKAGRRHVFRHARTLYEGSRLRVHYTAEMKCVGSGTYKMFDPRPNEPQRFKLPDILLDD
Ga0207662_105626361	3300025918	Switchgrass Rhizosphere	RRHVFRHARTLYEGSRLRVHYTAEMKCVGSGTYKMFDPRPNEPQRFKLPDILLDD
Ga0207679_108995442	3300025945	Corn Rhizosphere	HPVVTQCPICKQMVRLHVDKAGRRHVFRHARTLYEGSRLRVHYTAEMKCVGSGTYKMFDPRPNEPQRFKLPDILLDD
Ga0208724_10169051	3300027064	Forest Soil	LHVDKAGRRHVFAHARGLYEGSRFGVHYAAKMKCVGSGAQTMFDPRPNEHQSFNLPRSLLDES
Ga0208565_10237481	3300027662	Peatlands Soil	VFAHARGLYEGSRFDVHYAAKMRCGGSGAQTMFDPRPNEHQSFNLPRSLLDES
Ga0209274_102060562	3300027853	Soil	VFAHARGLYEGSRFGVHYAAKMKCVGSGAQTMFDPRPNEHQSFNLPRSLLDES
Ga0209693_102742182	3300027855	Soil	AGRRHVFAHARGLYEGSRFGVHYAAKMRCVGSGAQTMFDPRPNEHQSFNLPRSLADES
Ga0265338_104086912	3300028800	Rhizosphere	KAGRRHVYGHARELYEGSRLSVHYAAEAKCVGSGAIKAFDPHPNEHLRFKLPNSLLDE
Ga0308309_110611641	3300028906	Soil	QCPICQQMVRLHVNKAGRRHVFAHARGLYEGSRFGVHYAAKTRCDGSGAQTMFDPRPNEHQSFNLPRSLVDES
Ga0170834_1071035581	3300031057	Forest Soil	TQCPICQQMVRLHVNKAGRRHVFAHARGLYEGSRFGVHYAAKMRCDGSGAQTMFDPRPNEHQSFNLPRSLVDES
Ga0265760_100510362	3300031090	Soil	AHARGLYEGSRFGVHYAAKMKCVGSGAQTMFDPRPNEHQSFNLPRSLVDES
Ga0170824_1205248421	3300031231	Forest Soil	ICQQMVRLHVNKAGRRHVFAHARGLYEGSRFGVHYAAKMRCDGSGAQTMFDPRPNEHQSFNLPRSLVDES
Ga0302326_133295042	3300031525	Palsa	AGRRHVYGHARELYEGARISAHYAANMKCIGSGSRKLFDPHPNEHQHFKLPNSLLEK
Ga0318538_100149764	3300031546	Soil	VQLHVNEAGRQHVYGHARGLYEGSRFSAHYAAEMKCVGSDSPTAFDPRPSEHQRFKLPGTLAEE
Ga0310686_1020363793	3300031708	Soil	RRHVFAHARGLYEGSRFGVHYAAKMRCVGSGAQTMFDPRPNEHQSFKLPRTLLDES
Ga0310686_1034483762	3300031708	Soil	RRHVFAHARGLYEGSRFGVHYAAKMRCVGSGAQTMFDPRPNEHQSFKLPRSLLDES
Ga0310686_1188608101	3300031708	Soil	PLVTQCPICRQMVRLHVDKAGRRHVYGHARELYEGSRLSVHYAAEVKCVGSGAAKAFDPHPNEHLRFKLPNSLLEE
Ga0310686_1190442382	3300031708	Soil	VFAHARGLYEGSRFGVHYAAKMKCVGSGAQTMFDPRPNEHQSFNLPRSLVDES
Ga0306925_116003791	3300031890	Soil	ICRQTVRLHVNKAGRRHVVTHARSLYEGCRLCVHFVARVKCLGSGTVMTFDPRPDEHQRFKLPDSLLEE
Ga0310916_100508155	3300031942	Soil	HVNKAGRRHVVTHARSLYEGCRLCVHFVARVKCLGSGTVMTFDPRPDEHQRFKLPDSLLE
Ga0310913_105866062	3300031945	Soil	VVTQCPICKQMVRLHVNKAGRRHVFRHARTLYEGSRLRVHYTAEMKCVGSGALKMFDPRPNEPQRFKLPDILLEE
Ga0306922_107499022	3300032001	Soil	VQLHVNKAGRQHVYGHARGLYEGSRFSVHYAAEMKCVGSDSPTAFDPRPSEHQRFKLPGTLAEE
Ga0318575_101011373	3300032055	Soil	HVNKAGRQHVYGHARGLYEGSRFSAHYAAEMKCVGSDSPTAFDPRPSEHQRFKLPGTLAE
Ga0311301_1003345416	3300032160	Peatlands Soil	VLAHARSLYEGSRFDVHYAAKIRCVGSGTPKVFHPRPNESQHFKLPDTLAEE
Ga0311301_106281741	3300032160	Peatlands Soil	CPICQQMVRLHVNKAGRRHVFAHARGLYEGSRFGVHYAAKMRCVGSGAQTMFDPRPNEHQNFKLPRSLLDES
Ga0335079_104984462	3300032783	Soil	MVRLHVNKAGRRHVFAHARALYEGSRFRVHYAAKIKCPGSGVPPNFDPRPDEDQRFKLPSSLLGA
Ga0335079_123156032	3300032783	Soil	RGLYEGSRFDVHYAAKMRCVGSGAQTMFDPRPNEHQSFNLPRSLVDES
Ga0335080_103957103	3300032828	Soil	RAGRQHVYGHARGLYEGSRFSAHYAAEMKCVGSDSPTAFDPRPSEHQRFKLPGTLAEE
Ga0335081_100719971	3300032892	Soil	LVTPCPICGQMVRLHVNKAGRRHVFAHARELYAGSHLSEHYTAEVKCVGSGSTKLFDPRPNERQRFKLPNSLLEES
Ga0335072_114314521	3300032898	Soil	AGRQHVFAHARGLYAGARLSVHYSAKMKCVASGSRKQFDPRPNEHQHFKLPTMLLDE
Ga0335073_110815891	3300033134	Soil	RHVYGHARDLYEGSRLSVHYAADMKCVGSGSRKLFDPHPNEHQHFKLPNTLIEK
Ga0335073_121150222	3300033134	Soil	GRRHVYGHARELYEGASLSVHYASNMKCVGSGSPKLFDPHPNEHQRFKLPNSLLES
Ga0335077_102020001	3300033158	Soil	MVQLHVNKAGRQHVYGHARGLYEGSRFSAHYAAEMKCVGSDSPTAFDPRPSEHQRFKLPISLADE
Ga0335077_107459331	3300033158	Soil	QMVQLHVNRAGRQHVYGHARGLYEGSRFSAHYAAEMKCVGSDSPTAFDPRPSEHQRFKLPGTLAEE
Ga0335077_111137092	3300033158	Soil	CPICGQMVRLHVNRAGRRHVFAHAHALYEGSQFSVHYAAKAKCAGSGNAKLFDPRPDEHQRFKLPSSLLDE
Ga0335077_121768742	3300033158	Soil	KQMVRLHVNKAGRRHVFGHARELYEGSRLSVHYAAEVKCVGSGALKAFDPHPNEHLRFNLPNSLLDE
Ga0334790_033917_427_624	3300033887	Soil	MVRLHVNKAGRRHVFAHARDLYEGSRISVHYAAKFKCIGSGSRKLFDPRPNERQRFKLPNSLLEQ

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.30
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.30
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F043548

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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