Metagenome / Metatranscriptome Family F043539

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F043539
Family Type	Metagenome / Metatranscriptome
Number of Sequences	156
Average Sequence Length	63 residues
Representative Sequence	MAKQPPKQQQLHSWAVYHIKGTPAKLVGIIDNAPDEQTAIARAIEEYQVPPNERGRLIAQRRD
Number of Associated Samples	68
Number of Associated Scaffolds	156

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	15.58 %
% of genes near scaffold ends (potentially truncated)	42.95 %
% of genes from short scaffolds (< 2000 bps)	89.10 %
Associated GOLD sequencing projects	59
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (80.769 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (39.103 % of family members)
Environment Ontology (ENVO)	Unclassified (71.154 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (64.744 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.78% β-sheet: 23.08% Coil/Unstructured: 57.14%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 156 Family Scaffolds
PF07045	DUF1330	3.21
PF00196	GerE	3.21
PF00589	Phage_integrase	1.92
PF07750	GcrA	1.28
PF00578	AhpC-TSA	0.64
PF16656	Pur_ac_phosph_N	0.64
PF03466	LysR_substrate	0.64
PF05362	Lon_C	0.64
PF03030	H_PPase	0.64
PF07369	DUF1488	0.64
PF01436	NHL	0.64
PF02674	Colicin_V	0.64
PF00557	Peptidase_M24	0.64
PF00857	Isochorismatase	0.64
PF00239	Resolvase	0.64
PF04964	Flp_Fap	0.64
PF00805	Pentapeptide	0.64

COG ID	Name	Functional Category	% Frequency in 156 Family Scaffolds
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	3.21
COG5352	Uncharacterized conserved protein	Function unknown [S]	1.28
COG0466	ATP-dependent Lon protease, bacterial type	Posttranslational modification, protein turnover, chaperones [O]	0.64
COG1067	Predicted ATP-dependent protease	Posttranslational modification, protein turnover, chaperones [O]	0.64
COG1286	Colicin V production accessory protein CvpA, regulator of purF expression and biofilm formation	Cell wall/membrane/envelope biogenesis [M]	0.64
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.64
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	0.64
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.64
COG1750	Predicted archaeal serine protease, S18 family	General function prediction only [R]	0.64
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.64
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.64
COG3480	Predicted secreted protein YlbL, contains PDZ domain	Signal transduction mechanisms [T]	0.64
COG3808	Na+ or H+-translocating membrane pyrophosphatase	Energy production and conversion [C]	0.64
COG3847	Flp pilus assembly protein, pilin Flp	Extracellular structures [W]	0.64

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.77 %
All Organisms	root	All Organisms	19.23 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.77 %
cellular organisms	root	All Organisms → cellular organisms	18.59 %
Viruses	superkingdom	All Organisms → Viruses	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.77 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	18.59 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.77 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	12.18 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.77 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	11.54 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.77 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.69 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.28 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.77 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.21 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.28 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.64 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.64 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.77 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.92 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.28 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.64 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.64 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.77 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.28 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.64 %
unclassified Mesorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium	0.64 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.64 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.77 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.28 %
Mesorhizobium sp. L103C565B0	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. L103C565B0	0.64 %
Bradyrhizobium sp. C9	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. C9	0.64 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.64 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.64 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005332\|Ga0066388_106238947	Not Available	602	Open in IMG/M
3300005332\|Ga0066388_107515507	Not Available	547	Open in IMG/M
3300005332\|Ga0066388_108434080	Not Available	513	Open in IMG/M
3300005363\|Ga0008090_14302608	Not Available	648	Open in IMG/M
3300005764\|Ga0066903_100260648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2690	Open in IMG/M
3300005764\|Ga0066903_101087071	Not Available	1473	Open in IMG/M
3300005764\|Ga0066903_103798510	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. C9	812	Open in IMG/M
3300005764\|Ga0066903_107854788	Not Available	548	Open in IMG/M
3300006162\|Ga0075030_100756471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	768	Open in IMG/M
3300006174\|Ga0075014_100311191	Not Available	833	Open in IMG/M
3300010048\|Ga0126373_10124143	Not Available	2420	Open in IMG/M
3300010048\|Ga0126373_10159729	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2151	Open in IMG/M
3300010048\|Ga0126373_10208536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1898	Open in IMG/M
3300010048\|Ga0126373_10304075	Not Available	1592	Open in IMG/M
3300010048\|Ga0126373_10696898	Not Available	1074	Open in IMG/M
3300010048\|Ga0126373_10827250	Not Available	988	Open in IMG/M
3300010048\|Ga0126373_10947428	Not Available	926	Open in IMG/M
3300010048\|Ga0126373_11713371	Not Available	692	Open in IMG/M
3300010048\|Ga0126373_12218842	Not Available	610	Open in IMG/M
3300010048\|Ga0126373_12261183	Not Available	604	Open in IMG/M
3300010361\|Ga0126378_10328206	Not Available	1637	Open in IMG/M
3300010361\|Ga0126378_11373753	Not Available	799	Open in IMG/M
3300010361\|Ga0126378_12662621	Not Available	571	Open in IMG/M
3300010366\|Ga0126379_10504231	Not Available	1282	Open in IMG/M
3300010366\|Ga0126379_11352425	Not Available	818	Open in IMG/M
3300010366\|Ga0126379_11713615	Not Available	733	Open in IMG/M
3300010376\|Ga0126381_100331914	Not Available	2095	Open in IMG/M
3300010376\|Ga0126381_100462586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1782	Open in IMG/M
3300010376\|Ga0126381_102614354	Not Available	722	Open in IMG/M
3300010376\|Ga0126381_104572070	Not Available	534	Open in IMG/M
3300016270\|Ga0182036_10337331	Not Available	1158	Open in IMG/M
3300016270\|Ga0182036_10546256	Not Available	923	Open in IMG/M
3300016270\|Ga0182036_11030871	Not Available	679	Open in IMG/M
3300016294\|Ga0182041_11063671	Not Available	734	Open in IMG/M
3300016294\|Ga0182041_11832673	Not Available	563	Open in IMG/M
3300016319\|Ga0182033_10156794	All Organisms → cellular organisms → Bacteria	1764	Open in IMG/M
3300016319\|Ga0182033_10899569	Not Available	784	Open in IMG/M
3300016319\|Ga0182033_10942459	Not Available	766	Open in IMG/M
3300016319\|Ga0182033_11414454	Not Available	626	Open in IMG/M
3300016341\|Ga0182035_11024482	Not Available	732	Open in IMG/M
3300016341\|Ga0182035_11152090	Not Available	691	Open in IMG/M
3300016341\|Ga0182035_11385973	Not Available	631	Open in IMG/M
3300016341\|Ga0182035_11849337	Not Available	547	Open in IMG/M
3300016357\|Ga0182032_10211375	Not Available	1484	Open in IMG/M
3300016357\|Ga0182032_10260235	Not Available	1353	Open in IMG/M
3300016357\|Ga0182032_10416951	Not Available	1089	Open in IMG/M
3300016371\|Ga0182034_10216710	Not Available	1490	Open in IMG/M
3300016371\|Ga0182034_10416400	Not Available	1105	Open in IMG/M
3300016371\|Ga0182034_11401369	Not Available	611	Open in IMG/M
3300016371\|Ga0182034_11635549	Not Available	566	Open in IMG/M
3300016387\|Ga0182040_11209501	Not Available	636	Open in IMG/M
3300016404\|Ga0182037_11134661	Not Available	685	Open in IMG/M
3300016404\|Ga0182037_11162132	Not Available	677	Open in IMG/M
3300016422\|Ga0182039_10070105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2475	Open in IMG/M
3300016422\|Ga0182039_10177306	Not Available	1679	Open in IMG/M
3300016422\|Ga0182039_12058014	Not Available	526	Open in IMG/M
3300020199\|Ga0179592_10001228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10400	Open in IMG/M
3300020580\|Ga0210403_10630924	All Organisms → cellular organisms → Bacteria → Proteobacteria	863	Open in IMG/M
3300020580\|Ga0210403_10941728	Not Available	679	Open in IMG/M
3300020580\|Ga0210403_11060243	Not Available	631	Open in IMG/M
3300021170\|Ga0210400_10006845	All Organisms → cellular organisms → Bacteria	9527	Open in IMG/M
3300021170\|Ga0210400_10864214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	739	Open in IMG/M
3300021180\|Ga0210396_11617985	Not Available	529	Open in IMG/M
3300021560\|Ga0126371_10117543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2677	Open in IMG/M
3300021560\|Ga0126371_10148005	Not Available	2406	Open in IMG/M
3300021560\|Ga0126371_10904170	Not Available	1027	Open in IMG/M
3300021560\|Ga0126371_13243301	Not Available	550	Open in IMG/M
3300029636\|Ga0222749_10355349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	768	Open in IMG/M
3300031543\|Ga0318516_10522938	Not Available	680	Open in IMG/M
3300031543\|Ga0318516_10809619	Not Available	529	Open in IMG/M
3300031545\|Ga0318541_10109624	Not Available	1490	Open in IMG/M
3300031545\|Ga0318541_10126887	Not Available	1389	Open in IMG/M
3300031545\|Ga0318541_10554457	Not Available	643	Open in IMG/M
3300031545\|Ga0318541_10784131	Not Available	532	Open in IMG/M
3300031668\|Ga0318542_10596808	Not Available	576	Open in IMG/M
3300031679\|Ga0318561_10620794	Not Available	595	Open in IMG/M
3300031682\|Ga0318560_10188562	Not Available	1100	Open in IMG/M
3300031682\|Ga0318560_10725502	Not Available	537	Open in IMG/M
3300031713\|Ga0318496_10548274	Not Available	639	Open in IMG/M
3300031719\|Ga0306917_10240193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1385	Open in IMG/M
3300031719\|Ga0306917_10411419	Not Available	1057	Open in IMG/M
3300031719\|Ga0306917_10530377	All Organisms → cellular organisms → Bacteria	925	Open in IMG/M
3300031719\|Ga0306917_10699832	Not Available	796	Open in IMG/M
3300031719\|Ga0306917_10980028	Not Available	660	Open in IMG/M
3300031724\|Ga0318500_10640766	Not Available	540	Open in IMG/M
3300031736\|Ga0318501_10699411	Not Available	559	Open in IMG/M
3300031744\|Ga0306918_10301972	All Organisms → cellular organisms → Bacteria	1234	Open in IMG/M
3300031744\|Ga0306918_10354732	All Organisms → cellular organisms → Bacteria	1138	Open in IMG/M
3300031744\|Ga0306918_10387451	Not Available	1088	Open in IMG/M
3300031744\|Ga0306918_10873427	Not Available	701	Open in IMG/M
3300031744\|Ga0306918_11047400	Not Available	633	Open in IMG/M
3300031747\|Ga0318502_10453357	Not Available	766	Open in IMG/M
3300031747\|Ga0318502_10697024	Not Available	614	Open in IMG/M
3300031748\|Ga0318492_10495062	Not Available	648	Open in IMG/M
3300031768\|Ga0318509_10446747	Not Available	723	Open in IMG/M
3300031770\|Ga0318521_10342528	Not Available	885	Open in IMG/M
3300031770\|Ga0318521_11008834	Not Available	510	Open in IMG/M
3300031771\|Ga0318546_10766031	Not Available	679	Open in IMG/M
3300031795\|Ga0318557_10264265	Not Available	789	Open in IMG/M
3300031796\|Ga0318576_10447860	Not Available	610	Open in IMG/M
3300031820\|Ga0307473_10120593	Not Available	1438	Open in IMG/M
3300031820\|Ga0307473_10914858	Not Available	634	Open in IMG/M
3300031821\|Ga0318567_10726306	Not Available	563	Open in IMG/M
3300031833\|Ga0310917_10451310	Not Available	875	Open in IMG/M
3300031846\|Ga0318512_10074593	All Organisms → cellular organisms → Bacteria	1558	Open in IMG/M
3300031879\|Ga0306919_10303024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1213	Open in IMG/M
3300031879\|Ga0306919_10338809	Not Available	1147	Open in IMG/M
3300031879\|Ga0306919_10444188	Not Available	998	Open in IMG/M
3300031879\|Ga0306919_10616853	Not Available	837	Open in IMG/M
3300031890\|Ga0306925_10162129	All Organisms → cellular organisms → Bacteria	2408	Open in IMG/M
3300031890\|Ga0306925_10348170	Not Available	1591	Open in IMG/M
3300031890\|Ga0306925_10364839	Not Available	1550	Open in IMG/M
3300031890\|Ga0306925_11125879	Not Available	792	Open in IMG/M
3300031893\|Ga0318536_10195808	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1029	Open in IMG/M
3300031897\|Ga0318520_11069320	Not Available	511	Open in IMG/M
3300031910\|Ga0306923_10156273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2604	Open in IMG/M
3300031910\|Ga0306923_11411601	Not Available	733	Open in IMG/M
3300031912\|Ga0306921_11401277	Not Available	768	Open in IMG/M
3300031912\|Ga0306921_11927852	Not Available	631	Open in IMG/M
3300031941\|Ga0310912_11139094	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300031941\|Ga0310912_11507489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	506	Open in IMG/M
3300031942\|Ga0310916_10215553	Not Available	1610	Open in IMG/M
3300031942\|Ga0310916_10290636	Not Available	1383	Open in IMG/M
3300031942\|Ga0310916_10691104	Not Available	864	Open in IMG/M
3300031945\|Ga0310913_10145528	Not Available	1635	Open in IMG/M
3300031945\|Ga0310913_10872742	Not Available	633	Open in IMG/M
3300031946\|Ga0310910_10738813	Not Available	777	Open in IMG/M
3300031946\|Ga0310910_10901253	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300031946\|Ga0310910_11151955	Not Available	603	Open in IMG/M
3300031954\|Ga0306926_10092366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. L103C565B0	3700	Open in IMG/M
3300031954\|Ga0306926_10107523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3427	Open in IMG/M
3300031954\|Ga0306926_10457811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1571	Open in IMG/M
3300031954\|Ga0306926_11513797	Not Available	774	Open in IMG/M
3300031954\|Ga0306926_12946151	Not Available	510	Open in IMG/M
3300032001\|Ga0306922_11666093	Not Available	632	Open in IMG/M
3300032001\|Ga0306922_11714486	Not Available	621	Open in IMG/M
3300032025\|Ga0318507_10123398	Not Available	1095	Open in IMG/M
3300032025\|Ga0318507_10386809	Not Available	609	Open in IMG/M
3300032043\|Ga0318556_10614089	Not Available	567	Open in IMG/M
3300032051\|Ga0318532_10342530	Not Available	530	Open in IMG/M
3300032059\|Ga0318533_11047477	Not Available	598	Open in IMG/M
3300032064\|Ga0318510_10298624	Not Available	671	Open in IMG/M
3300032076\|Ga0306924_11478333	Not Available	721	Open in IMG/M
3300032091\|Ga0318577_10060693	Not Available	1715	Open in IMG/M
3300032091\|Ga0318577_10242655	Not Available	863	Open in IMG/M
3300032091\|Ga0318577_10342221	Not Available	715	Open in IMG/M
3300032261\|Ga0306920_100288687	Not Available	2445	Open in IMG/M
3300032261\|Ga0306920_100604793	Not Available	1622	Open in IMG/M
3300032261\|Ga0306920_100789115	Not Available	1395	Open in IMG/M
3300032261\|Ga0306920_100895965	Not Available	1297	Open in IMG/M
3300032261\|Ga0306920_100953917	Not Available	1251	Open in IMG/M
3300033289\|Ga0310914_10107070	All Organisms → cellular organisms → Bacteria	2415	Open in IMG/M
3300033289\|Ga0310914_11196737	Not Available	662	Open in IMG/M
3300033290\|Ga0318519_10989362	Not Available	522	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.72%
Aquatic	Environmental → Aquatic	1.28%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.72%
Sediment	Environmental → Aquatic → Sediment	1.28%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	94.23%
Loam	Environmental → Terrestrial → Soil → Loam	4.49%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.28%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	76.92%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.49%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.28%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.64%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	39.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	36.54%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	16.03%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.49%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.28%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.28%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.64%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.64%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066388_1062389472	3300005332	Tropical Forest Soil	MPKLRPIKQQEVRGRSWSVYHIKRTPAKLVGIVDNAPDEQTATARAIVEYDVPPNESGRLIAYRRRD*
Ga0066388_1075155071	3300005332	Tropical Forest Soil	MAKRPMGKELRQRKRSWAVYHLKGTPAKLVGLIYDAPDEQTAITRAIEEYQVPPNESGRLLAHRRRD
Ga0066388_1084340801	3300005332	Tropical Forest Soil	MAERPTKPQRQRTHSSWSVYHIKSTPAKLVGIVAAPDAETAIARAIEEYQVPPNERGQLIAHRRRD*
Ga0008090_143026081	3300005363	Tropical Rainforest Soil	MTKQPQTNSWAVYHIKGTPAKLVGVIRNVPDAETAIEHAIEKYQVPPNERGRLMAQRRD*
Ga0066903_1002606485	3300005764	Tropical Forest Soil	MAKRPSKQQQATHSWAVYHIKGTPAKFVGVVDDAPDEEMAIARAIDQYQVPLNERSRLMARRRE*
Ga0066903_1010870712	3300005764	Tropical Forest Soil	MPVMAKQQQSHSWAVHHIKGTPAKLVGIIDNAPDAETAIARAIDEYQVPPNERGRLIAQRRD*
Ga0066903_1037985102	3300005764	Tropical Forest Soil	MAFAMAKQPTKQRQGHSWAIYHIKGTPREAVGIIDNAPDAETAIAPRDRGISGAPNERGRLMARRRV*
Ga0066903_1078547881	3300005764	Tropical Forest Soil	HSWAVYHIKGTPAKLVGIIDDAPDEKTAIERAIEEYKVPPNERGRLMAQRRD*
Ga0075030_1007564711	3300006162	Watersheds	MSPESRIGAPAAVAKQLTNPQAPSWAVYHLKGTPATLVGIVDDQPDEAAAIERAIKEYDVPPNERGRLMAQRRD*
Ga0075014_1003111911	3300006174	Watersheds	TLSFRHCNAMPKRPTTQQAHSWAVYHLKGTPAKLVGIIADAPDAKTAMERAIEEYQVPPNQRGRLIAQRRD*
Ga0126373_101241432	3300010048	Tropical Forest Soil	MAKPPTRQPHTYSWAVYLTKTIPAKLVGFIEEAPDEQTAIARAIMEYRVPKNEHGQLVARRRG*
Ga0126373_101597294	3300010048	Tropical Forest Soil	MAKRPTRQQQQGHSWAVYHLKSNPAKLVGIVDAPDEQTAIARAIVEYDVPLNESGRLIAHRRRARTPHRRPRRSPP*
Ga0126373_102085362	3300010048	Tropical Forest Soil	MTKRSTKQQHPQLGRRSWAIYHIKGTPAKLVGIVDAPDEQTAIARAIVEYDVSPNESGRLIAHQRRIDPAGR*
Ga0126373_103040754	3300010048	Tropical Forest Soil	VPDPAAATKPSWAVYHLKGTPAKLVGIIDNAPDENTSIERAIEEYKVPPNEHDQLMALRRD*
Ga0126373_106968983	3300010048	Tropical Forest Soil	MARRPKQPQPTTKQHSSWSVYHITGTPAKLVGIVEAPDAETAIARVIKEYHVPPNERGGLIAHRRD*
Ga0126373_108272501	3300010048	Tropical Forest Soil	MHSWAVYHIKGTPAKLAGIIDDAPDEKTAIERAIEEYKVPPNERGRLMAQRRD*
Ga0126373_109474281	3300010048	Tropical Forest Soil	MAKRPMGKELRQRKRSWAVYHLKGTPAKLVGLIYDAPDEQTAITRAIEEYQVPPNESGRLLAHRRRD*
Ga0126373_117133712	3300010048	Tropical Forest Soil	MAERPTKPQRQRTHSSWSVYHIKSKPAKLVGIVAAPDAETAIARAIEEYQVPPNERGQLIAHRRRD*
Ga0126373_122188421	3300010048	Tropical Forest Soil	MPKLRPIKQPRGHSWAVYHIKGTPAKLVGVVDAPDEQTAIARPIEEYQVPPNERDQLTADQRRATAVADAAESSV
Ga0126373_122611831	3300010048	Tropical Forest Soil	MPVMAKQQQSHSWAVHHIKGTPAKLVGIIDNAPDEKTAIARAIEEYQVPPNERGRLIARRRD*
Ga0126378_103282063	3300010361	Tropical Forest Soil	MSKRPTKQQRHSWAVYHIKGTPAKLVGIIDNAPDAETAVARAIEEYQVPPSERGRLIAQRRD*
Ga0126378_112571222	3300010361	Tropical Forest Soil	MTMARSATPQTYSWSVYHIKGTPAKFVGIVDNQPDAESAIKAAIEEHQVPPNERGRLIAKRRSNP*
Ga0126378_113737532	3300010361	Tropical Forest Soil	MPKLRPIKQQTKTQSWAVYHIKETAVKLVGIVGAPDEQTAIARAIEEYQVPPNERGRLIARRRD*
Ga0126378_126626211	3300010361	Tropical Forest Soil	PPTATFPSKQQSHSWAVYHIKGTPAQLVGIIDNAPDEQTAIARAIVEYDVPPNESDRLMALRRRD*
Ga0126379_105042311	3300010366	Tropical Forest Soil	MLTAMTKKRPINQHLPRGYPWSVYHIKSTAAKLVAIIDNAPDEQTAIARAIEEYQVPPNERGRLMALRRD*
Ga0126379_113524251	3300010366	Tropical Forest Soil	MAKRPIKQQQTTHSWAIYHIKGTPAKLVGIIDAPDEQTAVARAIEEYQVPPNERGRLIAQRRD*
Ga0126379_117136152	3300010366	Tropical Forest Soil	MSKRHTKQQPTTHSWSVYRIKGTPATLVGIVDAPGAETAMARAIEEYQVPPNERVKLIAHRRRD*
Ga0126381_1003319145	3300010376	Tropical Forest Soil	KQPLHSWAVYHIKGAPAKLVGIVYDQPDADAAIKQAIEEYQVPPNERGRLIARQRD*
Ga0126381_1004625864	3300010376	Tropical Forest Soil	MSKRPTKQQTYSSAVYHIKGTPAKLVGIVYDQPDADSAIKQAIMEYDVPPNERGRLIAQRRS*
Ga0126381_1026143541	3300010376	Tropical Forest Soil	VPRLRPIKQKQTHSWSVYHLKGTPAKFVGIIENAPDEQTAIARAIVEFDVPPNEHGQLIYHRRRD*
Ga0126381_1045720701	3300010376	Tropical Forest Soil	MPKLRPIKQQTKTQSWAVYHIKETAAKLVGIVGAPDEQTAIARAIEEYQVPPNERSRLIARRRD*
Ga0182036_103373312	3300016270	Soil	MAKRPTEQQQQGHSWAVYHIKGTPAKLVGIIDNAPDEQTAIARAIEEYQVPPNERGRLMARRRD
Ga0182036_105462561	3300016270	Soil	MPKRPTKQQGHSWAVYHIKGTPAKLVGIIDNAPDEQTAIARAIVEYDMPPNESSRLMAQRRD
Ga0182036_110308711	3300016270	Soil	QSWAVYHIKETAAKLVGIVGAPDEQTAIERAIEEYQVPPNERSRLIARRRD
Ga0182041_110636713	3300016294	Soil	MAKQPPKQQQLHSWAVYHIKGTPAKLVGIIADAPDAETAIARAIEEYQVPPNERDRLIAQRRD
Ga0182041_118326732	3300016294	Soil	QSWTVYHIKGTPPKLVGVIRNATDAETAIGRAIQEYQVPPNERGRLMAQRRIE
Ga0182033_101567941	3300016319	Soil	MANRPTKQWQGHSWAVYHIKGTPAKLVGIIDNAPDAETAIARAIEEYQVPPNERGRLIAQRRD
Ga0182033_108995691	3300016319	Soil	TVALMPKRPTKQQSRSWAVYHIKGTPAKLVGIIDNAPDEQTAIARAIVEYDVPPNESGRLMALRRRD
Ga0182033_109424591	3300016319	Soil	TKQRQGHSWAVYHIKGTPAKLVGIIDNAPDEQTAIARALEEYQVPPNERGRLIAQRRD
Ga0182033_114144541	3300016319	Soil	MAVAMAKQPTKQQTHSWAVYHIKSTPAKLVGIIDDAPDAETAIARAIEEYQVPPNERGRLIAHRRRD
Ga0182035_110244822	3300016341	Soil	MGYHGDRHGEGSMPKRPTKQQQGHSWAVYHIKGTPAKLVGIIDNAPDEQTAIARAIVEYDVPLNESG
Ga0182035_111520901	3300016341	Soil	MATAMAKQPTKQQQRHSWAVFHIKGTPAKLVGIIDNAPDAQTAIARAIVEYDVPPNESGRLAAQRRD
Ga0182035_113859731	3300016341	Soil	MAKRPTNQRQRHSWAVYHIKSTPAKLVGIIDNAPDAETAIARAIEEYQVPPNERGRLIAQRRD
Ga0182035_118493372	3300016341	Soil	DRFRLMPKRSTKQQQQGQSWAVYHIKGTPAKLVGVIRNATDAETAIERAIQEYQVPPNERGRLMAQRRIE
Ga0182032_102113753	3300016357	Soil	SWAVYHIKGTPAKLVGVIRNVPDAETAIEHAIEKYQVPPNERGRLMAQRRD
Ga0182032_102602351	3300016357	Soil	MPKRPTKQQSHSWAVYHIKGTPAKLVGIIDNAPDEQTAIARAIVEYDVPPNESGRLMALRRRD
Ga0182032_104169511	3300016357	Soil	MGKQPTKQQQGHSWAVYHIKGTPAKLVGIIVDAPDAETAIARAIKEYQLPPNERGRLIAQRRD
Ga0182034_102167102	3300016371	Soil	MAKPPTKQQLHSWAVYHIKGTPAKLVGIIDNAPDAETAIARAIEEYQGPPNERGWLMAHRSIV
Ga0182034_104164001	3300016371	Soil	KGHDSNHNSRFFRAPPTATSPSKQQSHSWAVYHIKGTPAQLVGIIDNAPDEQTAIARAIVEYDVPPNESGRLMALRRRD
Ga0182034_114013691	3300016371	Soil	MTKQPQTNSWAVYHIKGTPAKLVGVIRNVPDAETAIEHAIEKYQVPPNERGR
Ga0182034_116355491	3300016371	Soil	MTKQPSSKQTHSWAVYHIKGTPAKLVGIIGNAPDEKTAIARAIEEYQVPPNERGRVIAQRRD
Ga0182040_112095011	3300016387	Soil	MATAMAKQPTKQQQRHSWAVFHIKGTPAKLVGIIDNAPDAQTAIARAIVEYDVPPNESGRLIAQRQD
Ga0182037_111346612	3300016404	Soil	MAKQPPKQQQLHSWAVYHIKGTPAKLVGIIDNAPDEQTAIARAIEEYQVPPNERGRLIAQRRD
Ga0182037_111621321	3300016404	Soil	MPKRPTKQQSHSWAVYHIKGTPAKLAGIIDNAPDEQTAIARAIVEYDVPPNESGRLMALRRRD
Ga0182039_100701054	3300016422	Soil	MPKRPTKQQSHSWAVYHIKGTPAKLVGIIDNVPDAQTAIARAIEEYQVPPNERGRLMALRRG
Ga0182039_101773064	3300016422	Soil	MTKRPTKQQQTHSWAVYHIKGTPAKLVGIIVDAPDAETAIARAIDEHQVPPNERGRLIAQRLD
Ga0182039_120580141	3300016422	Soil	QGHSWAVYHIKGTPAKLVGIIDNVPDTETAIARAIEEYQVPPNERGRLIAQRRD
Ga0179592_1000122810	3300020199	Vadose Zone Soil	MVKRMTKQQSHSWAVYHLKGTPAKLVGIIDDAPDEQTAIERAIEEYKVPPNERGRLVAQRRD
Ga0210403_106309243	3300020580	Soil	MAKRPTKPEAHSWAVYHIKGTPAKLVGIVDAADEQSAIAKTIEEYEVPENQRGRLIARRR
Ga0210403_109417282	3300020580	Soil	MTLAMAKRPNRQRSYSWAVYHIRRTPAKLVGIVDAPDEQTAIAKAIEEYDVPPNQRGRLMAQRRD
Ga0210403_110602432	3300020580	Soil	MPHKQRTYSWSVYHIKGAPAKLVGIIDDAPDEKTAIERAIEEYNVPPNQRGRLIAQRRD
Ga0210400_100068458	3300021170	Soil	MAKKPTKQNHSWAVYYLKGTPAKLVGMVDDQPDEAAPIKQAIKEYDVPPNERGRPMAQRR
Ga0210400_108642141	3300021170	Soil	SWVVYHLKGTPAKLVGIVDDQPDTVAAIEQAIKQYDVPPDERGRLMAQRRAN
Ga0210396_116179851	3300021180	Soil	KPQAHSWAVYHLKGTPAKLVGIVDDQPDEAAAIEQAIKEYNVAPNERGRLIARRRD
Ga0126371_101175431	3300021560	Tropical Forest Soil	TPGRSTGVTGTPAKLIGFIDDAPGEDTAIAQAIEIYDIPLNLRGRLIARRRD
Ga0126371_101480054	3300021560	Tropical Forest Soil	MSKRPTKQQTYSSAVYHIKGTPAKLVGIVYDQPDADSAIKQAIMEYDVPPNERGRLIAQRRS
Ga0126371_109041702	3300021560	Tropical Forest Soil	MAKQPSSKQTHSWAVYHIKGTPAKLVGFIDNAPDEKTAIARAIEEYQVPPNERGRLIARRRD
Ga0126371_132433011	3300021560	Tropical Forest Soil	GHDRGWVGGAWYAIMCGMAKRPTTSKPRTHSWAVYHIKGTPAKLVGIIDNAPDAETAIARAIEEYQVPPNERGRLMALRRD
Ga0222749_103553491	3300029636	Soil	SWVVYHIRGTPAKLVGIAPDEQSAIAKAIEEYDMPQNLRGRLIARRRD
Ga0318516_105229381	3300031543	Soil	FQRLGRASSPTVALMPKRPTKQQSHSWAVYHIKGTPAKLAGIIDNAPDEQTAIARVIVEYDVPPNESGRLMALRRRD
Ga0318516_108096192	3300031543	Soil	MTKQPSSKQTHSWAVYHIKGTPAKLVGIIDNAPDEKTAIARAIEEYQVPPNERGRLIAQRRD
Ga0318541_101096243	3300031545	Soil	MMTKRPTKQRQGHSWAVYHIKGTPAKLVGIIDNVPDTETAIARAIEEYQVPPNERGRLIAQRRD
Ga0318541_101268871	3300031545	Soil	MTKQPQTNSWAVYHIKGTPAKLVGVIRNVPDAETAIEHAIEKYQVPPNERGRLMAQRRD
Ga0318541_105544571	3300031545	Soil	MAKQPPKQQQLHSWAVYHIKGTPAKLVGIIDNAPDAETAIARAIEEYQVPPNERDRLIAQRRD
Ga0318541_107841311	3300031545	Soil	FQRSGSASSPTVALMPKRPTKQQSRSWAVYHIKGTPAKLVGIIDNAPDEQTAIARAIVEYDVPPNESGRLMALRRRD
Ga0318528_102559692	3300031561	Soil	GIRWNDAMAKPPPTKQQSRSWAVYHTKGTPAKLVDIIADAPDEKTAIERAIIEYQVPPNERGRLIAQRRN
Ga0318542_105968081	3300031668	Soil	QPRGHSWSVYHIKGTPAKLVGIIDNAPDEQTAIARAIEEYQVPPNERGRLIAQRRD
Ga0318561_106207941	3300031679	Soil	MPKRPTKQQGHSWAVYHIKGTPAKLVGIIDNAPDEQTAIARAIDEYQVPPNERGRLIAQRRY
Ga0318560_101885621	3300031682	Soil	MAKLPTKQHLHSWAVYHIKGTPAKLVGIIDNAPDAETAIARAIEEYQVPPNERGRLIAQRRD
Ga0318560_107255021	3300031682	Soil	MPKRSTKQQQQGQSWAVYHIKGTPAKLVGVIRNATDAETAIERAIQEYQVPPNERGRLMAQRRRE
Ga0318496_105482742	3300031713	Soil	GSASSPTVALMPKRPTKQQSHSWAVYHIKGTPAKLVGIIDNAPDAETAIERAIEEYQVPPNERGRLIAQRRD
Ga0306917_102401931	3300031719	Soil	MTKQPSSKQTYSWAVYRIKGTPAKLVGIIGNAPDEKTAIARAIEEYQVPPNERGRVIAQRRD
Ga0306917_104114192	3300031719	Soil	LAPKGGARRSDQHTVALMPKRPTKQQSRSWAVYHIKGTPAKLVGIIDNAPDEQTAIARAIVEYDVPPNESGRLMALRRRD
Ga0306917_105303771	3300031719	Soil	MPKRPTKQQSHSWAVYHIKGTPAKLAGIIDNAPDEQTAIARVIVEYDVPPNESGRLM
Ga0306917_106998324	3300031719	Soil	QPTKQQTHSWAVYHIKGTPAKLVGIIDDAPDAETAIARAIEEYQVPPNERGRLMGRRRD
Ga0306917_109800282	3300031719	Soil	MPKRPTKQQSHSWAVYHIKGTPAKLVGIIDNAPDAETAIERAIEEYQVPPNERGRLIAQRRD
Ga0318500_106407661	3300031724	Soil	ALMPKRPTKQQSHSWAVYHIKGTPAKLAGIIDNAPDEQTAIARVIVEYDVPPNESGRLMALRRRD
Ga0318501_106994111	3300031736	Soil	MARRPTKQQPQPRGHSWSVYHIKGTPAKLVGIIDNAPDEQTAIARAIEEYQVPPNERGRLIAQRRD
Ga0306918_103019721	3300031744	Soil	RLLILDQRATMAVAMAKQPTKQQTHSWAVYHIKSTPAKLVGIIDDAPDAETAIARAIEEYQVPPNERGRLMGRRRD
Ga0306918_103547321	3300031744	Soil	MPKRPTKQQSHSWAVYHIKGTPAKLAGIIDNAPDEQTAIARVIVEYDVPPNESGRLMALRRRD
Ga0306918_103874511	3300031744	Soil	VTIERDGRCQAIGMAKQPTKPPQLHSWAVYHIKGTPAKLVGIIDNAPDAETAIARAIEEYQVPPNERGRLIAQRRD
Ga0306918_108734272	3300031744	Soil	MGTMATAMAKQPTKKQQRHSWAVFHIKGTPAKLVGIIDNAPDAQTAIARAIVEYDVPPNESGRLIAQRQD
Ga0306918_110474002	3300031744	Soil	RQGHSWAVYHIKGTPAKLVGIIDNVPDAETAIARAIEEYQVPPNERGRLIAQRRD
Ga0318502_104533572	3300031747	Soil	VYHIKGTPAKLVGVIRNVPDAETAIEHAIEKYQVPPNERGRLMAQRRD
Ga0318502_106970241	3300031747	Soil	MAKQPSSKQTHSWAVYHIKGTPAKLVGIIDNAPDEKTAIARAIEEYQVPPNERGRVIAQR
Ga0318492_104950621	3300031748	Soil	MAKPPAKQQLHSWAVYHIKGTPAKLVGIIVDAPDEQTAIARAIEEYQVPPNERGRLMALRRG
Ga0318509_104467472	3300031768	Soil	RPTKQRQGHSWAVYHIKGTPAKLVGIIDNVPDAETAIARAIEEYQVPPNERGRLIAQRRD
Ga0318521_103425281	3300031770	Soil	MPKRPTKQQSHSWAVYHIKGTPAKLVGIIDNAPDAETAIARAIDEYQVPPNERGRLIAQRRD
Ga0318521_110088342	3300031770	Soil	RQPTKQRQGHSWAVYHIKGTPAKLVGIIDNAPDAETAIARAIEEYQVPPNERGRLIAQRR
Ga0318546_107660311	3300031771	Soil	AHSWAVYHIKNTPAKLVGIIEAPDKETAIKRAIEEYKVPPNERARLMAQQRD
Ga0318557_102642652	3300031795	Soil	MPKRPTKQQNHSWAVYHIKGTPAKLVGIIDNAPDEQTAIARAIVEYDVPPNESGRLMALRRRD
Ga0318576_104478602	3300031796	Soil	SWAVYHIKGTPAKLVGIIDNVPDAQTAIARAIEEYQVPPNERGRLMALRRG
Ga0307473_101205932	3300031820	Hardwood Forest Soil	VTAKRQVKQKTHIWAVYHIKGTPAKFMGFIYDAPDEQTAIARAIKKYSVPPNEREQLMARRRD
Ga0307473_109148582	3300031820	Hardwood Forest Soil	VLQCPYHGEETNTKQQTTHSWAVYHLKGTPAKLVGIIDDAPDEKTAIARAIEEYKVPPNERGRLMAQRPD
Ga0318567_107263062	3300031821	Soil	SSPTVALMPKRPTKQQSHSWAVYHIKGTPAKLVGIIDNAPDAETAIERAIEEYQVPPNERGRLIAQRRD
Ga0310917_104513101	3300031833	Soil	MGYHGDRHGEGSMPKRPTKQQQGHSWAVYHIKGTPAKLVGIIDNAPDEQTAIARAIVEYDVPLNESGRLMAQRQD
Ga0318512_100745934	3300031846	Soil	VYHIKGTPAKLVGVVHNVPDAETAIARASEKYEVPPNERGRLIAQRRD
Ga0306919_103030244	3300031879	Soil	AKQPSSKQTHSWAVYHIKGTPAKLVGIIDNAPDEKIAIARAIEEYQVPPNERGRLIAQRR
Ga0306919_103388093	3300031879	Soil	QPHSWAVYHIKGTPAKLVGIIDNAPDEQTAIARAIEEYQVPPNERGRLIAQRRD
Ga0306919_104441884	3300031879	Soil	RLLIPDQRATMAVAMAKQPTKQQTHSWAVYHIKGTPAKLVGIIDDAPDAETAIARAIEEYQVPPNERGRLMGRRRD
Ga0306919_106168531	3300031879	Soil	RRRFQRLGRASSPTVALMPKRPTKQQSHSWAVYHIKGTPAKLAGIIDNAPDEQTAIARVIVEYDVPPNESGRLMALRRRD
Ga0306925_101621294	3300031890	Soil	MPKRSTKQQQQAQSWTVYHIKGTPPKLVGVIRNATDAETAIGRAIQEYQVPPNERGRLMAQRRIE
Ga0306925_103481703	3300031890	Soil	MPKRSTKQQQQGQSWAVYHIKGTPAKLVGVIRNATDAETAIERAIQEYQVPPNERGRLMAQRRIE
Ga0306925_103648391	3300031890	Soil	MMTKRPTKQRQGHSWAVYHIKGTPAKLVGIIDNVPDAETAIARAIEEYQVPPNERGRLIAQRRD
Ga0306925_111258792	3300031890	Soil	MAKRPTNQRQRHSWAVYHIKSTPAKLVGIIDNAPDEPTAIARAIVEYDVPPNESGRLMAQRRD
Ga0318536_101958081	3300031893	Soil	MAKPPTKQQLHSWAVYHIKGTPAKLVGIIDNVPDAQTAIARAIEEYQVPPNERGRLMALRRG
Ga0318520_110693202	3300031897	Soil	GQSWVVYHIKGTPAKLVGVVHNVPDAETAVARASEKYEVPRNERGRLIAQRRH
Ga0306923_101562733	3300031910	Soil	MTKQPSSKQTHSWAVYHIKGTPAKLVGIIDNAPDEKTAIARAIEEYQVPPNERGRLIAQ
Ga0306923_114116011	3300031910	Soil	CFAEARLESRQWATMAKQPTKQQAHSWAVYHIKGTPAKLVGIIDNAPDEKTAIARAIEEYQVRPNERGRLIAQRRD
Ga0306921_114012771	3300031912	Soil	QSLSESWPKQQQTHSWAVYHIKGTPAKLVGSIDNAPDAETAIARAIEEYQVPPNERGRLMGRRRD
Ga0306921_119278521	3300031912	Soil	RFQRLGRASSPTVALMPKRPTKQQSHSWAVYHIKGTPAKLAGIIDNAPDEQTAIARVIVEYDVPPNESGRLMALRRRD
Ga0310912_111390942	3300031941	Soil	LLGYNDAMVKKPTKQDTRSWAVYHIKGTPVKLVGIVYDARDEKTAIERAIEEYKVPPNERGRLLARRRD
Ga0310912_115074892	3300031941	Soil	MPKRPTKQAVLHSWAVYHIKGTPAKLIGIIDNAPDEQTAIARAVEEYQVPPNERGRLIAQRRD
Ga0310916_102155531	3300031942	Soil	MAKQPSSKQTHSWAVYHIKGTPAKLVGIIDNAPDEKIAIARAIEEYQVPPNERGRLIAQRRD
Ga0310916_102906362	3300031942	Soil	MGYHGDRHGEATTEQQAHSWAVYHIKGTPAKLVGIIDNAPDEKTAIARAIEEYQVRPNERGRLIAQRRD
Ga0310916_106911041	3300031942	Soil	KQQSRSWAVYHTKGTPAKLVDIIADAPDEKTAIERAIIEYQVPPNERGRLIAQRRN
Ga0310913_101455282	3300031945	Soil	MGYHGDRHGEATTKQQAHSWAVYYIKGTPAKLVGIIDNAPDEKIAIARAIEEYQVPPNERGRLIAQRRD
Ga0310913_108727421	3300031945	Soil	SRSWAVYHIKGTPAKLVGIIDNAPDEQTAIARAIVEYDVPPNESGRLMALRRRD
Ga0310910_107388131	3300031946	Soil	RRFQRSGSASSPTVALMPKRPTKQQSRSWAVYHIKGTPAKLVGIIDNAPDEQTAIARAIVEYDVPPNESGRLMALRRRD
Ga0310910_109012531	3300031946	Soil	LHSWAVYHIKSTPAKLVGIVDNAPDEQSAIARAIEEYQVPPNERGRLVALRRD
Ga0310910_111519551	3300031946	Soil	MTKQPSSKQTHSWAVYHIKGTPAKLVGIIDNAPDEKTAIARAIEEYQVPPNERGRVIAQRRD
Ga0306926_100923662	3300031954	Soil	MAKQPPKQQQLHSWAVYHIKGTPAKLVGIIDNAPDAETAIERAIEEYQVPPNERGRLIAQRRD
Ga0306926_101075232	3300031954	Soil	MAKRPTEQQQQGHSWAVYHIKGTPAKLVGIIDNAPDEQTAIARAIDEYQVPPNERGRLIAQRRD
Ga0306926_104578112	3300031954	Soil	MTKQPSSKQTYSWAVYRIKGTPAKLVGIIGNAPDEKTAIARAIEEYQVPPNERGRLIAQ
Ga0306926_115137971	3300031954	Soil	MTKRPTKQQQTHSWAVYHIKGTPAKFVGIVDAPDEKTAIARAIEEHQVPPNERGRLIAQRLD
Ga0306926_129461511	3300031954	Soil	MIKRPTNPPQHPLYSRAVYHLKGTPPKLVGIIDNAPDEQTAIARAIVEYDVPLNESRRLMAGRRD
Ga0306922_116660931	3300032001	Soil	IERDGRCQAIGMAKQPTKPPQLHSWAVYHIKGTPAKLVGIIDNAPDAETAIARAIEEYQVPPNERGRLIAQRRD
Ga0306922_117144861	3300032001	Soil	MQPHSWAVYHIKGTPAKLVGIIDNAPDEQTAIARAIEEYQVPPNERGRLIAQRRD
Ga0318507_101233984	3300032025	Soil	RYNDDMAKLPTKQHLHSWAVYHIKGTPAKLVGIIDNAPDAETAIARAIEEYQVPPNERGRLIAQRRD
Ga0318507_103868091	3300032025	Soil	ALAMAVDFDSCPGDQPTKQQQRHSHIKGTPAKLVGIIVDASDEQTAIERAIEEYKVPPNERGRLIALRRD
Ga0318556_106140892	3300032043	Soil	VALMPKRPTKQQSHSWAVYHIKGTPAKLVGIIDNAPDAETAIERAIEEYQVPPNERGRLIAQRRD
Ga0318532_103425302	3300032051	Soil	MVKKPTKQDTRSWAVYHIKGTPVKLVGIVYDARDEKTAIERAIEEYKVPPNERGRLLARRRD
Ga0318533_110474771	3300032059	Soil	MTKQPSSKQTYSWAVYRIKGTPAKLVGIIGNAPDEKTAIARAIEEYQVPPNERGRVIAQ
Ga0318510_102986242	3300032064	Soil	SWAVYHIKGTPAKLVGIIDNAPDAETAIARAIEEYQVPPNERGRLIAQRRD
Ga0306924_114783332	3300032076	Soil	HSWAVYHIKGTPAKLVGIIDNAPDEKTAIARAIEEYQVRPNERGRLIAQRRD
Ga0318577_100606934	3300032091	Soil	SWVVYHIKGTPAKLVGVVHNVPDAETAVARASEKYEVPRNERGRLIAQRRH
Ga0318577_102426553	3300032091	Soil	DMAKPPTKQQLHSWAVYHIKGTPAKLVGIIDNAPDAETAIARAIEEYQVPPNERGRLIAQRRD
Ga0318577_103422212	3300032091	Soil	TKQQSRSWAVYHIKGTPAKLVGIIDNAPDEQTAIARAIVEYDVPPNESGRLMALRRRD
Ga0306920_1002886872	3300032261	Soil	MTLQPLRGQHAMARRPTKQQPQPRGHSWSVYHIKGTPAKLVGIIDNAPDEQTAIARAIEEYQVPPNERGRLIAQRRD
Ga0306920_1006047934	3300032261	Soil	MGYHGDRHGEATTKQQAHSWAVYHIKGTPAKLVGIIDNAPDEKTAIARAIEEYQVRPNERGRLIAQRRD
Ga0306920_1007891151	3300032261	Soil	MAKPPPTKQQSRSWAVYHTKGTPAKLVDIIADAPDEKTAIERAIIEYQVPPNERGRLIAQRRN
Ga0306920_1008959651	3300032261	Soil	NFWRRSPRRLLILDQRATMAVAMAKQPTKQQTHSWAVYHIKSTPAKLVGIIDDAPDAETAIARAIEEYQVPPNERGRLMGRRRD
Ga0306920_1009539173	3300032261	Soil	QPGQSWVVYHIKGTPAKLVGVVHNVPDAETAVARASEKYEVPRNERGRLIAQRRH
Ga0310914_101070701	3300033289	Soil	TQPGQPWVVYHIQGTPAKLVGVVHNVPDAETAIARASEKYEVPPNERGRLIAQRRD
Ga0310914_111967373	3300033289	Soil	THSWAVYHIKGTPAKLVGIIDDAPDAETAIARAIEEYQVPPNERGRLMGRRRD
Ga0318519_109893621	3300033290	Soil	LMPKRSTKQQQQAQSWTVYHIKGTPPKLVGVIRNATDAETAIGRAIQEYQVPPNERGRLMAQRRIE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F043539

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences