Metagenome / Metatranscriptome Family F043475

Basic Information
Family ID	F043475
Family Type	Metagenome / Metatranscriptome
Number of Sequences	156
Average Sequence Length	46 residues
Representative Sequence	MADVDAARRALEDALGAGEVLSDPLALRLYARDASMVEGGCALV
Number of Associated Samples	144
Number of Associated Scaffolds	156

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	37.18 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	94.23 %
Associated GOLD sequencing projects	142
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Most Common Taxonomy
Group	Bacteria (93.590 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (18.590 % of family members)
Environment Ontology (ENVO)	Unclassified (30.128 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (34.615 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 43.06% β-sheet: 0.00% Coil/Unstructured: 56.94%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 156 Family Scaffolds
PF00581	Rhodanese	43.59
PF01661	Macro	8.97
PF01243	Putative_PNPOx	8.97
PF03883	H2O2_YaaD	3.21
PF11975	Glyco_hydro_4C	1.92
PF02557	VanY	1.28
PF02581	TMP-TENI	0.64
PF01663	Phosphodiest	0.64
PF00202	Aminotran_3	0.64
PF01872	RibD_C	0.64
PF08402	TOBE_2	0.64
PF01547	SBP_bac_1	0.64
PF03588	Leu_Phe_trans	0.64
PF12270	Cyt_c_ox_IV	0.64
PF00005	ABC_tran	0.64
PF13360	PQQ_2	0.64
PF04107	GCS2	0.64
PF00107	ADH_zinc_N	0.64
PF00232	Glyco_hydro_1	0.64
PF00534	Glycos_transf_1	0.64
PF00294	PfkB	0.64

COG ID	Name	Functional Category	% Frequency in 156 Family Scaffolds
COG2110	O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain	Translation, ribosomal structure and biogenesis [J]	8.97
COG3022	DNA-binding protein YaaA associated with the oxidative stress response	Replication, recombination and repair [L]	3.21
COG1876	LD-carboxypeptidase LdcB, LAS superfamily	Cell wall/membrane/envelope biogenesis [M]	1.28
COG2173	D-alanyl-D-alanine dipeptidase	Cell wall/membrane/envelope biogenesis [M]	1.28
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.64
COG0352	Thiamine monophosphate synthase	Coenzyme transport and metabolism [H]	0.64
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.64
COG2360	Leu/Phe-tRNA-protein transferase	Posttranslational modification, protein turnover, chaperones [O]	0.64
COG2723	Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase	Carbohydrate transport and metabolism [G]	0.64

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.59 %
Unclassified	root	N/A	6.41 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.59 %
Unclassified	root	N/A	6.41 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.59 %
Unclassified	root	N/A	6.41 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	85.90 %
Unclassified	root	N/A	6.41 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.64 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.64 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	84.62 %
Unclassified	root	N/A	6.41 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.64 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.64 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	59.62 %
Unclassified	root	N/A	6.41 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.64 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.64 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	26.92 %
Unclassified	root	N/A	6.41 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.56 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	2.56 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.92 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.64 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.64 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.64 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.64 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	26.92 %
Unclassified	root	N/A	6.41 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	2.56 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.56 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.92 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.64 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.64 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.64 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.64 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	26.92 %
Unclassified	root	N/A	6.41 %
Saccharopolyspora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora	2.56 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.56 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.92 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.64 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	0.64 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.64 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.64 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	26.92 %
Unclassified	root	N/A	6.41 %
Saccharopolyspora elongata	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora elongata	2.56 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.56 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.92 %
unclassified Nocardioides	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides	0.64 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.64 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.64 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.64 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	26.92 %
Unclassified	root	N/A	6.41 %
Saccharopolyspora elongata	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora elongata	2.56 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.56 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.92 %
Nocardioides sp. WL0053	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. WL0053	0.64 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.64 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.64 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.64 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000550\|F24TB_10495400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	583	Open in IMG/M
3300000890\|JGI11643J12802_12343762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	733	Open in IMG/M
3300000956\|JGI10216J12902_116157144	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300004114\|Ga0062593_101795146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	674	Open in IMG/M
3300004463\|Ga0063356_101893566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	899	Open in IMG/M
3300004480\|Ga0062592_101488679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	649	Open in IMG/M
3300005168\|Ga0066809_10000546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5043	Open in IMG/M
3300005354\|Ga0070675_100186228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1796	Open in IMG/M
3300005447\|Ga0066689_10317770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	968	Open in IMG/M
3300005471\|Ga0070698_100951958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	805	Open in IMG/M
3300005536\|Ga0070697_101401520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	624	Open in IMG/M
3300005546\|Ga0070696_100009445	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6531	Open in IMG/M
3300005554\|Ga0066661_10569789	All Organisms → cellular organisms → Bacteria → Terrabacteria group	675	Open in IMG/M
3300005555\|Ga0066692_10237478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1149	Open in IMG/M
3300005615\|Ga0070702_101552099	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300005841\|Ga0068863_100566523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1122	Open in IMG/M
3300005877\|Ga0075296_1007638	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300006047\|Ga0075024_100756310	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	539	Open in IMG/M
3300006224\|Ga0079037_102217285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	549	Open in IMG/M
3300006358\|Ga0068871_101948272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	559	Open in IMG/M
3300006572\|Ga0074051_10012630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2144	Open in IMG/M
3300006573\|Ga0074055_11502661	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300006575\|Ga0074053_11964513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1991	Open in IMG/M
3300006577\|Ga0074050_10645057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora elongata	516	Open in IMG/M
3300006606\|Ga0074062_12345040	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300006853\|Ga0075420_101153319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	666	Open in IMG/M
3300006871\|Ga0075434_101755856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	628	Open in IMG/M
3300006876\|Ga0079217_11407318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	545	Open in IMG/M
3300006876\|Ga0079217_11461840	Not Available	538	Open in IMG/M
3300007076\|Ga0075435_101894291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	523	Open in IMG/M
3300009031\|Ga0103682_10250556	All Organisms → cellular organisms → Bacteria → Proteobacteria	918	Open in IMG/M
3300009082\|Ga0105099_10550540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	703	Open in IMG/M
3300009098\|Ga0105245_10425094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1332	Open in IMG/M
3300009137\|Ga0066709_103368973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	581	Open in IMG/M
3300009162\|Ga0075423_12341450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	581	Open in IMG/M
3300009179\|Ga0115028_11076547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	652	Open in IMG/M
3300009503\|Ga0123519_10317620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	954	Open in IMG/M
3300009810\|Ga0105088_1086777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	566	Open in IMG/M
3300009816\|Ga0105076_1086756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	596	Open in IMG/M
3300009816\|Ga0105076_1114817	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	531	Open in IMG/M
3300009818\|Ga0105072_1039611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	885	Open in IMG/M
3300009836\|Ga0105068_1031256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	932	Open in IMG/M
3300009840\|Ga0126313_11056265	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	666	Open in IMG/M
3300010040\|Ga0126308_10201282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1279	Open in IMG/M
3300010041\|Ga0126312_10504293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	866	Open in IMG/M
3300011003\|Ga0138514_100017303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1256	Open in IMG/M
3300011107\|Ga0151490_1417889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	729	Open in IMG/M
3300011119\|Ga0105246_11826038	Not Available	581	Open in IMG/M
3300012039\|Ga0137421_1231051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	538	Open in IMG/M
3300012093\|Ga0136632_10062946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1712	Open in IMG/M
3300012204\|Ga0137374_10698872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	762	Open in IMG/M
3300012204\|Ga0137374_11159762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	545	Open in IMG/M
3300012356\|Ga0137371_10572105	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	869	Open in IMG/M
3300012359\|Ga0137385_11633438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	508	Open in IMG/M
3300012360\|Ga0137375_10863467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	722	Open in IMG/M
3300012680\|Ga0136612_10458989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	646	Open in IMG/M
3300012901\|Ga0157288_10292281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	566	Open in IMG/M
3300012964\|Ga0153916_10669104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1117	Open in IMG/M
3300012976\|Ga0134076_10141715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	979	Open in IMG/M
3300012976\|Ga0134076_10226724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	791	Open in IMG/M
3300013306\|Ga0163162_10935539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	978	Open in IMG/M
3300014299\|Ga0075303_1099170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	565	Open in IMG/M
3300014326\|Ga0157380_11258324	Not Available	786	Open in IMG/M
3300014745\|Ga0157377_11675820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. WL0053	512	Open in IMG/M
3300014829\|Ga0120104_1091297	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300014968\|Ga0157379_11357871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora elongata	688	Open in IMG/M
3300015374\|Ga0132255_102415019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	802	Open in IMG/M
3300018028\|Ga0184608_10429497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	571	Open in IMG/M
3300018032\|Ga0187788_10272544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	677	Open in IMG/M
3300018052\|Ga0184638_1194234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	716	Open in IMG/M
3300018066\|Ga0184617_1197796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	598	Open in IMG/M
3300018067\|Ga0184611_1267272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	601	Open in IMG/M
3300018071\|Ga0184618_10242379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	761	Open in IMG/M
3300018074\|Ga0184640_10161524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1003	Open in IMG/M
3300018078\|Ga0184612_10007803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5370	Open in IMG/M
3300018078\|Ga0184612_10599209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	523	Open in IMG/M
3300018078\|Ga0184612_10618568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	511	Open in IMG/M
3300018422\|Ga0190265_12581597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	606	Open in IMG/M
3300018433\|Ga0066667_11435987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	607	Open in IMG/M
3300018469\|Ga0190270_10146948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1907	Open in IMG/M
3300018469\|Ga0190270_12106433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	623	Open in IMG/M
3300018482\|Ga0066669_10680984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	905	Open in IMG/M
3300019767\|Ga0190267_10448842	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	741	Open in IMG/M
3300020003\|Ga0193739_1006942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	3023	Open in IMG/M
3300020006\|Ga0193735_1106467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	776	Open in IMG/M
3300020020\|Ga0193738_1095588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	853	Open in IMG/M
3300021073\|Ga0210378_10082864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1255	Open in IMG/M
3300021078\|Ga0210381_10051169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1238	Open in IMG/M
3300021080\|Ga0210382_10534752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	519	Open in IMG/M
3300021082\|Ga0210380_10476801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	572	Open in IMG/M
3300022694\|Ga0222623_10066053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1397	Open in IMG/M
3300022756\|Ga0222622_11342459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	526	Open in IMG/M
3300022898\|Ga0247745_1044577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	690	Open in IMG/M
3300025159\|Ga0209619_10448515	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	651	Open in IMG/M
3300025313\|Ga0209431_11193105	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	521	Open in IMG/M
3300025325\|Ga0209341_10545274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	917	Open in IMG/M
3300025327\|Ga0209751_10399717	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1140	Open in IMG/M
3300025917\|Ga0207660_11680293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	511	Open in IMG/M
3300025919\|Ga0207657_11187592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	580	Open in IMG/M
3300025942\|Ga0207689_11190655	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	641	Open in IMG/M
3300025945\|Ga0207679_11693348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	579	Open in IMG/M
3300026063\|Ga0208656_1007880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	738	Open in IMG/M
3300026071\|Ga0208537_1019738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	856	Open in IMG/M
3300026075\|Ga0207708_10907037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	763	Open in IMG/M
3300026090\|Ga0208912_1073683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	514	Open in IMG/M
3300026095\|Ga0207676_12005428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora elongata	577	Open in IMG/M
3300026121\|Ga0207683_10515326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1105	Open in IMG/M
3300026326\|Ga0209801_1207272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	779	Open in IMG/M
3300027209\|Ga0209875_1044999	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	533	Open in IMG/M
3300027561\|Ga0209887_1078350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	682	Open in IMG/M
3300027577\|Ga0209874_1116565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	625	Open in IMG/M
3300027650\|Ga0256866_1171068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	588	Open in IMG/M
3300027695\|Ga0209966_1165945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	516	Open in IMG/M
3300027877\|Ga0209293_10287061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	832	Open in IMG/M
3300027882\|Ga0209590_10649175	All Organisms → cellular organisms → Bacteria → Terrabacteria group	677	Open in IMG/M
3300027909\|Ga0209382_10758268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1038	Open in IMG/M
3300028590\|Ga0247823_11204350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	567	Open in IMG/M
3300028592\|Ga0247822_11789841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	524	Open in IMG/M
3300028597\|Ga0247820_10207789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1249	Open in IMG/M
3300028597\|Ga0247820_11145105	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	560	Open in IMG/M
3300028711\|Ga0307293_10224766	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	597	Open in IMG/M
3300028722\|Ga0307319_10071586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1098	Open in IMG/M
3300028744\|Ga0307318_10087875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1046	Open in IMG/M
3300028782\|Ga0307306_10149568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	648	Open in IMG/M
3300028784\|Ga0307282_10282049	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300028784\|Ga0307282_10651979	Not Available	510	Open in IMG/M
3300028791\|Ga0307290_10374553	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	521	Open in IMG/M
3300028807\|Ga0307305_10315389	Not Available	711	Open in IMG/M
3300028814\|Ga0307302_10071933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1630	Open in IMG/M
3300028876\|Ga0307286_10001058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7934	Open in IMG/M
3300028878\|Ga0307278_10236515	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	812	Open in IMG/M
3300028880\|Ga0307300_10007876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2694	Open in IMG/M
3300028884\|Ga0307308_10094331	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1423	Open in IMG/M
3300030006\|Ga0299907_10021720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4842	Open in IMG/M
3300030006\|Ga0299907_10562653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	892	Open in IMG/M
3300030336\|Ga0247826_10345567	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1082	Open in IMG/M
3300030336\|Ga0247826_11536543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	541	Open in IMG/M
3300030619\|Ga0268386_10481184	Not Available	854	Open in IMG/M
3300031198\|Ga0307500_10179613	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300031226\|Ga0307497_10037870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1619	Open in IMG/M
3300031226\|Ga0307497_10581693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora elongata	564	Open in IMG/M
3300031229\|Ga0299913_11110189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	753	Open in IMG/M
3300031538\|Ga0310888_10878615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	559	Open in IMG/M
3300031862\|Ga0315280_10504258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	525	Open in IMG/M
3300031965\|Ga0326597_12032400	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300031997\|Ga0315278_11735031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	592	Open in IMG/M
3300032012\|Ga0310902_11003590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	580	Open in IMG/M
3300032075\|Ga0310890_10929968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	696	Open in IMG/M
3300032156\|Ga0315295_11515865	Not Available	646	Open in IMG/M
3300032174\|Ga0307470_11851627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	512	Open in IMG/M
3300032342\|Ga0315286_11152847	Not Available	761	Open in IMG/M
3300032516\|Ga0315273_10109887	Not Available	3770	Open in IMG/M
3300033407\|Ga0214472_10623351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	988	Open in IMG/M
3300033482\|Ga0316627_100260092	All Organisms → cellular organisms → Bacteria	1392	Open in IMG/M
3300033513\|Ga0316628_102571375	Not Available	672	Open in IMG/M
3300033550\|Ga0247829_10162058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1750	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.90%
Host-Associated	Host-Associated	14.10%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.03%
Aquatic	Environmental → Aquatic	19.87%
Plants	Host-Associated → Plants	14.10%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.38%
Freshwater	Environmental → Aquatic → Freshwater	10.90%
Sediment	Environmental → Aquatic → Sediment	8.33%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.33%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.13%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.64%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.64%
Roots	Host-Associated → Plants → Roots	0.64%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	48.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.33%
Loam	Environmental → Terrestrial → Soil → Loam	6.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.41%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.13%
Sand	Environmental → Terrestrial → Soil → Sand	5.13%
Sediment	Environmental → Aquatic → Freshwater → Sediment	4.49%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.85%
Lake	Environmental → Aquatic → Freshwater → Lake	3.21%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.92%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.28%
Ice	Environmental → Aquatic → Freshwater → Ice	1.28%
Drinking Water	Environmental → Aquatic → Freshwater → Drinking Water	0.64%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.64%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.64%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.64%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.64%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.33%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.41%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.77%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.13%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	5.13%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	4.49%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.85%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	3.21%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.21%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	1.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.92%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.28%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	1.28%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.28%
Chlorinated	Environmental → Aquatic → Freshwater → Drinking Water → Chlorinated	0.64%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	0.64%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.64%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.64%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.64%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.64%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.64%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	18.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.41%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.13%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	5.13%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.85%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	3.21%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.21%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.21%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.56%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.56%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	1.92%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	1.28%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	1.28%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.28%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.28%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.28%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.28%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.28%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.28%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.28%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.28%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.28%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.28%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.28%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.64%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.64%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.64%
Groundwater	Environmental → Aquatic → Freshwater → Drinking Water → Chlorinated → Groundwater	0.64%
Hot Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring	0.64%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.64%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.64%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.64%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.64%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.64%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.64%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.64%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.64%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.64%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.64%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005877	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_404	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006572	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006577	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009031	Microbial communities from groundwater in Rifle, Colorado, USA - 3D_0.1um	Environmental	Open in IMG/M
3300009082	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009179	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1	Environmental	Open in IMG/M
3300009503	Hot spring microbial communities from Yellowstone National Park - Yellowstone National Park OP-RAMG-02	Environmental	Open in IMG/M
3300009810	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30	Environmental	Open in IMG/M
3300009816	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10	Environmental	Open in IMG/M
3300009818	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40	Environmental	Open in IMG/M
3300009836	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300011107	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012039	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT534_2	Environmental	Open in IMG/M
3300012093	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ611 (21.06)	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012680	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ224A (23.06)	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014299	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014829	Permafrost microbial communities from Nunavut, Canada - A10_35cm_6M	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020020	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a1	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300022898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S109-311C-5	Environmental	Open in IMG/M
3300025159	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 3	Environmental	Open in IMG/M
3300025313	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 (SPAdes)	Environmental	Open in IMG/M
3300025325	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2 (SPAdes)	Environmental	Open in IMG/M
3300025327	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1 (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026063	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D1 (SPAdes)	Environmental	Open in IMG/M
3300026071	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_TuleA_D1 (SPAdes)	Environmental	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026090	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D2 (SPAdes)	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300027209	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027561	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027577	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027650	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67 HiSeq	Environmental	Open in IMG/M
3300027695	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes)	Host-Associated	Open in IMG/M
3300027877	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028590	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day30	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300030619	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031862	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_40	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032156	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032342	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F043475

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F24TB_104954001	3300000550	Soil	MADVDAARRALEDALGAGEVLSDPLALRLYARDASMVE
JGI11643J12802_123437621	3300000890	Soil	VVDVEGARRALEDVLGAGEVLSDPLALRLYARDASMVEGGCALVAFPRSRN
JGI10216J12902_1161571441	3300000956	Soil	VPDLDLARSELIAALGADAVLSDPLALRLYARDASMVE
Ga0062593_1017951462	3300004114	Soil	MADVDAARRDLEAALGAGRVRADPLTRRLYARDASMVEGSC
Ga0063356_1018935663	3300004463	Arabidopsis Thaliana Rhizosphere	VPNLEAARTDLIDVLGVEAVLADPLALRLYARDASMVEGSAGLVVFVRSADDVVT
Ga0062592_1014886791	3300004480	Soil	VADVEGARRALEDALGAGEVLSDPLALRLYARDASMVEGGCALVAFPRSRDDI
Ga0066809_100005468	3300005168	Soil	VADVEGARRALEEAFGAGEVLSDPLALRLYARDASMVEGGCA
Ga0070675_1001862281	3300005354	Miscanthus Rhizosphere	VADVEGARRALEDALGAGEVLSDPLALRLYARDASMVEGGCALVAFPRSRED
Ga0066689_103177701	3300005447	Soil	VANLEAARTDLIDALGVEAVLADPLALRLYARDASMVEGG
Ga0070698_1009519581	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MTDADVDRARADLERSLGGARVLSDPAALRLYARDASMVEGGCALVVFPTSV
Ga0070697_1014015201	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VADVEGARRALEDALGAGEVLSDPLALRLYARDASMVEGGCALVAFPRSRDDIVAC
Ga0070696_1000094451	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VPNPDAARTDLIAALGVEAVLADPLALRLYARDASMVEGS
Ga0066661_105697892	3300005554	Soil	MTGVDDARRDLETALGPVEVLSDPLALRLYARDASMVEGSCGLV
Ga0066692_102374784	3300005555	Soil	MTGVDDARRDLETALGPVEVLSDPLALRLYARDASMV
Ga0070702_1015520991	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MPDVDAARRALEEALGRSEVLSDPLALRLYARDASLVEGGCSLVAFPRKLEDV
Ga0068863_1005665233	3300005841	Switchgrass Rhizosphere	MADVDAARRALEDALGAGEVLSDPLALRLYARDASMVEGGCALVAFPRTRDDIV
Ga0075296_10076383	3300005877	Rice Paddy Soil	MADVEGARRALQDVLGSDEVLSDPLALRLYARDASMVEGGCALVAFPHSTEHIV
Ga0075024_1007563102	3300006047	Watersheds	VSDLTAARHDLEATLGADAVLADPLALRLYARDASMVEGSAGLVVFPR
Ga0079037_1022172852	3300006224	Freshwater Wetlands	MADVEAARGALEEALGAAEVLSDPLALALYGRDASMVEGGCALVAF
Ga0068871_1019482721	3300006358	Miscanthus Rhizosphere	MADVDAARRALEDALGAGEVLSDPLALRLYARDASMVEGGCALV
Ga0074051_100126301	3300006572	Soil	VADVEGARRALEDALGAGEVLSDPLALRLYSRDAS
Ga0074055_115026613	3300006573	Soil	MTDVDAARHALEDALGPGDVLSDPLSLKLYARDASMVEGGCALVAFP
Ga0074053_119645131	3300006575	Soil	VPNLEAARTDLIDALGVEAVLADPLALRLYARDASMVEGSA
Ga0074050_106450572	3300006577	Soil	MTDVDAARHALEDALGPGDVLSDPLSLKLYARDASMVEGGCALVAFPRSTD
Ga0074062_123450403	3300006606	Soil	MTDVDGARRALEDALGPAEVLSDPLALKLYARDASMVEGGCALVAFPRSTE
Ga0075420_1011533191	3300006853	Populus Rhizosphere	MTDVDVARRALEDALGPERVLSDTLALRLYAWDASMVEGGC
Ga0075434_1017558561	3300006871	Populus Rhizosphere	VANLDAAHTDLIDALGDEAVIADPLALRLYARDASMV
Ga0079217_114073181	3300006876	Agricultural Soil	MADVDAARRELEEALGADAVLSDPLALRLYARDASMVEGSAGLVVFP
Ga0079217_114618401	3300006876	Agricultural Soil	MPDADGARLALERVLGASAVLADPLARRLYARDASM
Ga0075435_1018942912	3300007076	Populus Rhizosphere	VTPDLAGARVELERVLGAEDVLSDPLARRLYARDASMVEGSA
Ga0103682_102505561	3300009031	Groundwater	MADVEAARRALHDTLGPSEVLSDPLALALYARDASMV
Ga0105099_105505403	3300009082	Freshwater Sediment	MADVDAARRALEEALGPAEVLSDPLALAVYGRDASMLEGGCALVAFPRERDHIVACVRVA
Ga0105245_104250944	3300009098	Miscanthus Rhizosphere	VPNLDAARTDLIDALGVEAVLADPLALRLYARDAS
Ga0066709_1033689732	3300009137	Grasslands Soil	MTDVGMARRALEEALGPDDVLTDPLALTLYRRDASMVEGGCAIVVFP
Ga0075423_123414502	3300009162	Populus Rhizosphere	VPNLNAARTDLIDSLGVESVLADPLALRLYARDASMVEGSAGLVVFVRSA
Ga0115028_110765471	3300009179	Wetland	MADVEAARRALEDALGPSEVLSDPLALALYARDASMVEGGCALVAFPRE
Ga0123519_103176201	3300009503	Hot Spring	MADVDAARRALEQALGPAEVLSDPLALLLYARDSSMVEGSCALVAFPRRVEDIVACVR
Ga0105088_10867771	3300009810	Groundwater Sand	VADVEGARRALEDALGAGEVLSDPLALRLYARDASMVEGGCALVATPRSRDDIVACV
Ga0105076_10867562	3300009816	Groundwater Sand	MADVDAARLELEEALGTNEVLSDPLALTLYARDASMVEGGCALVAFPHTV
Ga0105076_11148171	3300009816	Groundwater Sand	MADVDAARLELEEALGTTEVLSDPLALTLYARDASMVE
Ga0105072_10396111	3300009818	Groundwater Sand	MTDVDAARRALEDALGPAEVLSDPLALRLYARDASMVEGGCALVAFPRSRDDIVTCI
Ga0105068_10312563	3300009836	Groundwater Sand	MADVDAARLELEEALGTNEVLSDPLALTLYARDASMVEGGCALVAFPHTVE
Ga0126313_110562653	3300009840	Serpentine Soil	MADVEGALRALEDVLGAGEVLSDSLALRLYARDASMVEGGC
Ga0126308_102012824	3300010040	Serpentine Soil	VANVEGARRALEDALGAGEVLAEPLALRLYARDASMVEGGCALVAFPRSRDDIVACV
Ga0126312_105042931	3300010041	Serpentine Soil	VADVQGARRALEAAFGTSEVLTDPLALRLYARDASMLEG
Ga0138514_1000173034	3300011003	Soil	VPNLDAARTDLIDALGVEAVLADPLALRLYARDASMVEGSAGLVVFVHS
Ga0151490_14178891	3300011107	Soil	MADVDAARLELEATLGVAEVLSDPLARKLYSRDASL
Ga0105246_118260381	3300011119	Miscanthus Rhizosphere	VSDLTAARRDLEATLGAEAVLADPLALRLYARDASMVEGSAGLVAFPRSAD
Ga0137421_12310511	3300012039	Soil	MSDVTAARHALEDALGVEEVLSDPLALRLYARDASMVEGG
Ga0136632_100629461	3300012093	Polar Desert Sand	MADVVAARRELEAALGPDAVLADPLALRLYARDASMVEG
Ga0137374_106988721	3300012204	Vadose Zone Soil	MADVNAARLELEEALGTNEVLSDPLALTLYARDASMVEGGCALVA
Ga0137374_111597621	3300012204	Vadose Zone Soil	MADVDAARLELEEALGTNEVLSDPLALTLYARDASMVEGGCALVA
Ga0137371_105721051	3300012356	Vadose Zone Soil	MAGLDVARDELVAALGADAVLHDPLALRLYARDASMVEGSAG
Ga0137385_116334381	3300012359	Vadose Zone Soil	MAELDAARDELVAALGADAVLHDPLALRLYAGDASMVEGSAGLVVFVRSADDVVT
Ga0137375_108634671	3300012360	Vadose Zone Soil	MADVDAARLELEEALGTNEVLSDPLALTLYTRDASMVEGGCALVAFPHTVEDVVACVRVA
Ga0136612_104589891	3300012680	Polar Desert Sand	MADVDAARRELEAELGSGAVLTDPLALRLYARDASMVEGECAIVAL
Ga0157288_102922811	3300012901	Soil	VADVDVARRALEDALGPERVLSDPLALRLYARDASMVEGGCAFVAFPQTAE
Ga0153916_106691041	3300012964	Freshwater Wetlands	MADVEAARRALEAALGPAEVLSDPLALALYGRDASLVEGGCALVAFPTELEHVVAC
Ga0134076_101417153	3300012976	Grasslands Soil	MADVDAARRELEEALGTTEVLSDPLALTLYARDAAMVEGGCALV
Ga0134076_102267243	3300012976	Grasslands Soil	VPDLDPARTELVAALGEGAVLTDPLALRLYARDASM
Ga0163162_109355393	3300013306	Switchgrass Rhizosphere	MTDVDAARRALEAALGPDEVLSDPLALKLYARDASMVEGGCALVAFPRST
Ga0075303_10991701	3300014299	Natural And Restored Wetlands	MADVDAARRALEDALGPAEVLSDPRALRLYARDGAMVEGGCALVAFPRTRADIVSCIRIAAE
Ga0157380_112583241	3300014326	Switchgrass Rhizosphere	VTDLGGARQDLEAALGPGAVVDDPLERRLYARDAS
Ga0157377_116758202	3300014745	Miscanthus Rhizosphere	MTDVEAARRALEAALGSDEVLSDPLALKLYARDAS
Ga0120104_10912973	3300014829	Permafrost	MPDVGSARRALEDALGAAEILTEPTALKLYARDASLVEGSAALVAFPRTIDD
Ga0157379_113578711	3300014968	Switchgrass Rhizosphere	MTDVDAARRALEAALGPDEVLSDPLALKLYARDASMV
Ga0132255_1024150191	3300015374	Arabidopsis Rhizosphere	MADVDAARRALEDALGAGEVLSDPLALRLYARDASMVEGGCALVAFPRTR
Ga0184608_104294971	3300018028	Groundwater Sediment	VADVEGARRALEDALGAGEVLSDPLALRLYARDASMVEGGCALVAF
Ga0187788_102725443	3300018032	Tropical Peatland	MAAVDEARRALEAALGPDEVLSDPLALKLYARDASMVEGGCALVAF
Ga0184638_11942343	3300018052	Groundwater Sediment	VTDVEGARRSLEDALGPAEVLSDPLALRLYARDASMV
Ga0184617_11977961	3300018066	Groundwater Sediment	VADVEGARRALEDALGAGEVLSDPLALRLYARDASM
Ga0184611_12672721	3300018067	Groundwater Sediment	VPNLDAARTDLIDALGLEAVLADPLALRLYARDASMVEGSAGLVVFVHS
Ga0184618_102423791	3300018071	Groundwater Sediment	MTDVDGARRALEEALGASEVLADPLALKLYARDASMVEGGCA
Ga0184640_101615243	3300018074	Groundwater Sediment	MPDVEAARRALEVALGADEVLSDPLELRLYARDASMVEGGCALVAFPRTT
Ga0184612_100078031	3300018078	Groundwater Sediment	MTDVDAARRALEDALGPAEVLSDPLALRLYARDASMVEGGCALV
Ga0184612_105992092	3300018078	Groundwater Sediment	MADVDAARRELEEALGTSEVLSDPLALTLYARDASMVEGGCALVAFP
Ga0184612_106185681	3300018078	Groundwater Sediment	VADVEGARRALEGALGPAEVLSDPLALRLYARDASMVEGGCALVAFPRS
Ga0190265_125815971	3300018422	Soil	MADVEAARRALLEALGPDEVLSDPLALTLYARDASLVEGTCALVVFPRSVEDI
Ga0066667_114359871	3300018433	Grasslands Soil	MADLDAARRELVDAFGADAVLADPLALQLYARDASMVEGTA
Ga0190270_101469485	3300018469	Soil	VADVEGARRALEDALGAGEVLSDPLALRLYARDASMVEGGCALVAFP
Ga0190270_121064332	3300018469	Soil	MADVEGARRALEDALGPAEVLSDPLALRLYARDASMVEGGCALVAFPRSRDDIVTC
Ga0066669_106809841	3300018482	Grasslands Soil	MATLDAARDELVAALGADAVLHDPLALRLYARDASMVEGSAGL
Ga0190267_104488421	3300019767	Soil	VVDVEGARRALEDALGAGEVLSDPLALRLYARDASMVEGGCAL
Ga0193739_10069426	3300020003	Soil	VADVEGARGALEDALGPAQVLSDPLALRLYARDASMVDGG
Ga0193735_11064671	3300020006	Soil	VPNLDAARTDLIDALGVEAVLADPLALRLYARDASMVEGSAGLVVFVYSAD
Ga0193738_10955881	3300020020	Soil	VADVEGARGALEDALGPAQVLSDPLALRLYARDASMVDGGCAF
Ga0210378_100828644	3300021073	Groundwater Sediment	MADVDAARLELEESLGTTEVLSDPLALTLYARDAS
Ga0210381_100511694	3300021078	Groundwater Sediment	VPNLDAARTDLIDALGVEAVLADPLALRLYARDASMVEGSAGLVVFVHSADDVVTC
Ga0210382_105347521	3300021080	Groundwater Sediment	MADVDAARIALRGALGPAEVLSDPLSLRLYARDASMVEGGCALVAFPRRLEDIV
Ga0210380_104768012	3300021082	Groundwater Sediment	MADVDAARRALEDALGAGEVLSDPLSLRLYARDASMVEGGCALVAF
Ga0222623_100660534	3300022694	Groundwater Sediment	VADVEGARRSLEDALGPAEVLSDPLALRLYARDASMVEGGCALVAFPRSRDDIVRCIRVAAE
Ga0222622_113424592	3300022756	Groundwater Sediment	MAAVDAARRALEDALGAGEVLSDPLALRLYSRDASMVEGGCALVAFPRTRDDIVACLNV
Ga0247745_10445771	3300022898	Soil	VADVDVARRALEDALGPERVLSDPLALRLYARDASMVEGGCAFVAFPQTAEEI
Ga0209619_104485151	3300025159	Soil	MADIDAARRALEEALGPAEVLSDPLALVLYGRDASMVEGGCALVAFPRELGQIVTCVRVA
Ga0209431_111931052	3300025313	Soil	MADVDGARRALEDALGPTEVLSDPLALILYARDASMVEGGCALVAFPHSLEDIVECMRI
Ga0209341_105452741	3300025325	Soil	MADVDGARRSLEDALGPTEVLSDPLALILYARDASMVEGQCA
Ga0209751_103997173	3300025327	Soil	MADVDAARRALEDALGPAEVLSDPLALRLYARDGSMVEG
Ga0207660_116802931	3300025917	Corn Rhizosphere	VPNPDAARTDLIAALGVEAVLADPLALRLYARDASM
Ga0207657_111875921	3300025919	Corn Rhizosphere	VADVEGARRALEDALGAGEVLSDPLALRLYARDASMVEGGCALVA
Ga0207689_111906552	3300025942	Miscanthus Rhizosphere	MADIEAARRDLVAALDADRVLADPLALRLYARDASMVEGGCA
Ga0207679_116933481	3300025945	Corn Rhizosphere	MADVDAARRDLEAALGAGRVRADPLTRRLYARDASMVEGSCELVAFPA
Ga0208656_10078803	3300026063	Natural And Restored Wetlands	MADVDAARRELEAALGPEAVLSDPLARRLYARDASMVEGGCALVALP
Ga0208537_10197381	3300026071	Natural And Restored Wetlands	MADVDAARRELDAALGSRSVLSDPLALRLYARDASMVEGGCA
Ga0207708_109070371	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	VTDLRAARRDLDAALGAQAVHSDPLAVKLYARDAS
Ga0208912_10736831	3300026090	Natural And Restored Wetlands	MADVDAARRELDAALGSRSVLSDPLALRLYARDASMVEGGCALVALPTTTE
Ga0207676_120054282	3300026095	Switchgrass Rhizosphere	MTDVDAARRALEAALGPDEVLSDPLALKLYARDASMVEGGCALVAFPRSTDDIV
Ga0207683_105153263	3300026121	Miscanthus Rhizosphere	MPDVDAARRALEEALGRSEVLSDPLALRLYARDASLVEGECALVAF
Ga0209801_12072723	3300026326	Soil	VANLEAARTDLIDALGVEAVLADPLALRLYARDASMVEGGA
Ga0209875_10449992	3300027209	Groundwater Sand	VADVEGARRALEDALGAGEVLSDPLALRLYARDASMVEGGCALVAFPRSRDDIV
Ga0209887_10783503	3300027561	Groundwater Sand	VADVEGARGALEGALGPAEVLSDPLALRLYARDASMAEGGC
Ga0209874_11165653	3300027577	Groundwater Sand	MPDLDGARRALEEALGTSEVLSDPLALRLYARDASMVEGGCALVAFP
Ga0256866_11710682	3300027650	Soil	MADVEAARRALEEALGRSEVLSDPLALRLYARDASLVEGGCALVTFPRRLP
Ga0209966_11659452	3300027695	Arabidopsis Thaliana Rhizosphere	VADVEGARRALEDALGAGEVLSDPLALRLYARDASMVEGGCALVAFPRSR
Ga0209293_102870611	3300027877	Wetland	MADVEAARRALEDALGPSEVLSDPLALALYARDASMVEGGCALVAFPREL
Ga0209590_106491751	3300027882	Vadose Zone Soil	MTGVDDARRDLETALGPAEVLSDPLALRLYARDASMVEGSCGLVAFSRTVD
Ga0209382_107582681	3300027909	Populus Rhizosphere	VTDVDDARRALEGALGPERVLSDPLALRLYARDASMVEGGCALVVFPESTDEIV
Ga0247823_112043502	3300028590	Soil	MVDLDAARRALTDVLGADAVLADPLSLRLYARDASLVEGNASV
Ga0247822_117898412	3300028592	Soil	MADIEAARRDLVAALDADRVLADPLALRLYARDASMVE
Ga0247820_102077894	3300028597	Soil	MADVDAARRELEAALGPEAVLSDPLARRLYARDASMVEGGCA
Ga0247820_111451052	3300028597	Soil	MADVDAARRALEDALGAGEVLSDPLALRLYARDASMVEGGCALDA
Ga0307293_102247661	3300028711	Soil	MADVDAARLELEEALGTTEVLSDPLALTLYARDASMVEGGCA
Ga0307319_100715861	3300028722	Soil	MQDLHAARRELEAALGADAVLSDRLALRLYARDASMVEGSAGLVVFPLS
Ga0307318_100878751	3300028744	Soil	MPDLDAARRDLEETLGADAVLSDPLALRLYARDASMVEGSAGLVVFPTSTD
Ga0307306_101495682	3300028782	Soil	VPNLDAARTDLIDALGVEAVLADPLALRLYARDASMVEGSAGLVVFVRSADDVV
Ga0307282_102820493	3300028784	Soil	MTDVDGARRALEEALGPAEVLSDPLALKLYARDASMVE
Ga0307282_106519791	3300028784	Soil	MADVDAARRELEAALGADRVMADPLTRRLYARDASMV
Ga0307290_103745532	3300028791	Soil	MSDLDAARSELEEALGADAVLSDPLALRLYARDASMVEGSAGLV
Ga0307305_103153891	3300028807	Soil	VPGRRDPPAGVERARRDLARVLGQDGVLAEPLARALYRRDASMLEGDCALVAFPRSR
Ga0307302_100719334	3300028814	Soil	MADVDAARRALEDALGTGEVLSDPLALRLYARDASMVEGGCALVAFPRTRDDIVTCV
Ga0307286_100010581	3300028876	Soil	VPNLDAARTHLIDALGVEAVLADPLALRLYARDASMVEGSAGLVVFVHSADDVVTC
Ga0307278_102365153	3300028878	Soil	MADIEAARRELEEALGASEVLSDPLALTLYARDASMVEGGCALVAFPHTVEDV
Ga0307300_100078766	3300028880	Soil	VADVEGARRALEDALGAGEVLSDPLALRLYARDASMVEGGCALVAFPRSRE
Ga0307308_100943314	3300028884	Soil	VPNLDAARTDLIDALGVEAVLADPLALRLYARDASMVEGSAGLVVFVYSA
Ga0299907_100217207	3300030006	Soil	MADLAAARRELEAALGSDRVLADALALRLYARDASMVQGSAGLVV
Ga0299907_105626531	3300030006	Soil	MADVDAARRELEVALGSEGVLSDPLALRLYSRDASMVEGGCALVALPTT
Ga0247826_103455673	3300030336	Soil	MADVDAARRALEDALGAGEVLSDPLALRLYARDASMVEGG
Ga0247826_115365431	3300030336	Soil	VPNLDAARTDLIDALGVEAVLADPLALRLYARDASMVEGSAGLVVFVHSADDVVTCM
Ga0268386_104811843	3300030619	Soil	MADLAAARRELEAALGSDRVLADALALRLYARDASMVQGSAGLVVFPGST
Ga0307500_101796132	3300031198	Soil	MTDVDGARRALEVALGSTEVLADPLALKLYARDAS
Ga0307497_100378701	3300031226	Soil	VPNLDAARADLIDALGVEAVLADPLALRLYARDASMVEGSAGLVVFVHSAGDVVT
Ga0307497_105816931	3300031226	Soil	MTDVEGARRALEETLGPAEVLSDPLALKLYARDASMVEGGCALVAFPRSTE
Ga0299913_111101891	3300031229	Soil	MADVEAARRALIEALGPDEVLSDPLALTLYARDASLVEGACALVVFPRSVADTA
Ga0310888_108786151	3300031538	Soil	MADVDAARRALEDALGAGEVLSDPLALRLYARDASMVEG
Ga0315280_105042581	3300031862	Sediment	MADVKAARRALEDALGPAEVLSEPLALLLYARDSSMVEGGCALVAFP
Ga0326597_120324001	3300031965	Soil	MANVQAARRELEDALGPSEVLSDPLALRLYARDASLVEGGCALV
Ga0315278_117350312	3300031997	Sediment	MTATDAARAAISQALAPERVLSDPLELALYARDASMFEGGCSLVALPLSTQE
Ga0310902_110035902	3300032012	Soil	MTKLEAARRELSAALGAEAVLVDPLALRLYARDASIVEGSAGLVA
Ga0310890_109299681	3300032075	Soil	MADLDAARRDLVDALGADGVAADPLTRRLYARDAS
Ga0315295_115158652	3300032156	Sediment	VGDLTAARRDLEAALGADAVLTDPLALRLYARDASMVEGS
Ga0307470_118516272	3300032174	Hardwood Forest Soil	MADLDAARRALEAALGADDVLTDPLALRLYARDASMVEGSA
Ga0315286_111528472	3300032342	Sediment	VSDLSAARRDLEAALGADAVLADPLALRLYARDASM
Ga0315273_101098871	3300032516	Sediment	MADVDGAKRALEAALGLAEVLADPLSLKLYTRDASMVEGSCALVAFARSTDD
Ga0214472_106233511	3300033407	Soil	MADVDGARRSLEDALGPTEVLSDPLALILYARDASMVEGGCALVVFPHF
Ga0316627_1002600924	3300033482	Soil	MADVEAARRALEDALGPSEVLSDPLALALYARDASMVEGGCALVAFPRELEHIVAC
Ga0316628_1025713752	3300033513	Soil	MADLDAARVDLDRALGSDAVFADPLALRLYGRDASMVEGEAGLVAL
Ga0247829_101620581	3300033550	Soil	MADVDAARRELEAALGPEAVLSDPLARRLYARDASMVEGGCALVALPTT

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign