NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F043309

Metagenome / Metatranscriptome Family F043309

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F043309
Family Type Metagenome / Metatranscriptome
Number of Sequences 156
Average Sequence Length 51 residues
Representative Sequence MFKTIIATLILATASVALTSKVNAGPTDKYPTQAEQNYMDRASKIWDGGAQ
Number of Associated Samples 96
Number of Associated Scaffolds 156

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 83.77 %
% of genes near scaffold ends (potentially truncated) 26.28 %
% of genes from short scaffolds (< 2000 bps) 88.46 %
Associated GOLD sequencing projects 91
AlphaFold2 3D model prediction Yes
3D model pTM-score0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (67.308 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(26.923 % of family members)
Environment Ontology (ENVO) Unclassified
(32.051 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(50.000 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 44.30%    β-sheet: 0.00%    Coil/Unstructured: 55.70%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.30
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 156 Family Scaffolds
PF13545HTH_Crp_2 4.49
PF00027cNMP_binding 3.85
PF00239Resolvase 3.21
PF01177Asp_Glu_race 1.92
PF13407Peripla_BP_4 1.92
PF03480DctP 1.28
PF00535Glycos_transf_2 1.28
PF06808DctM 1.28
PF03073TspO_MBR 0.64
PF01425Amidase 0.64
PF10518TAT_signal 0.64
PF13193AMP-binding_C 0.64
PF12697Abhydrolase_6 0.64
PF13632Glyco_trans_2_3 0.64
PF00082Peptidase_S8 0.64
PF01058Oxidored_q6 0.64
PF00248Aldo_ket_red 0.64
PF00378ECH_1 0.64
PF00557Peptidase_M24 0.64
PF04168Alpha-E 0.64
PF01522Polysacc_deac_1 0.64
PF01042Ribonuc_L-PSP 0.64
PF01569PAP2 0.64
PF08546ApbA_C 0.64
PF13244MbhD 0.64
PF14760Rnk_N 0.64
PF00106adh_short 0.64

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 156 Family Scaffolds
COG1961Site-specific DNA recombinase SpoIVCA/DNA invertase PinEReplication, recombination and repair [L] 3.21
COG2452Predicted site-specific integrase-resolvaseMobilome: prophages, transposons [X] 3.21
COG0154Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidaseTranslation, ribosomal structure and biogenesis [J] 0.64
COG0251Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 familyDefense mechanisms [V] 0.64
COG0377NADH:ubiquinone oxidoreductase 20 kD subunit (chain B) or related Fe-S oxidoreductaseEnergy production and conversion [C] 0.64
COG0726Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 familyCell wall/membrane/envelope biogenesis [M] 0.64
COG1740Ni,Fe-hydrogenase I small subunitEnergy production and conversion [C] 0.64
COG1893Ketopantoate reductaseCoenzyme transport and metabolism [H] 0.64
COG1941Coenzyme F420-reducing hydrogenase, gamma subunitEnergy production and conversion [C] 0.64
COG2307Uncharacterized conserved protein, Alpha-E superfamilyFunction unknown [S] 0.64
COG3260Ni,Fe-hydrogenase III small subunitEnergy production and conversion [C] 0.64
COG3476Tryptophan-rich sensory protein TspO/CrtK (mitochondrial benzodiazepine receptor homolog)Signal transduction mechanisms [T] 0.64


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A67.31 %
All OrganismsrootAll Organisms32.69 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000956|JGI10216J12902_107653681All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2795Open in IMG/M
3300000956|JGI10216J12902_112733567Not Available946Open in IMG/M
3300000956|JGI10216J12902_114749190Not Available575Open in IMG/M
3300001305|C688J14111_10241996Not Available565Open in IMG/M
3300001686|C688J18823_10371568Not Available928Open in IMG/M
3300001686|C688J18823_11033231Not Available521Open in IMG/M
3300002568|C688J35102_118775908Not Available595Open in IMG/M
3300002568|C688J35102_119423322Not Available692Open in IMG/M
3300002568|C688J35102_120819777Not Available1686Open in IMG/M
3300002897|JGI24804J43974_1002109All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1519Open in IMG/M
3300002897|JGI24804J43974_1008812Not Available789Open in IMG/M
3300003319|soilL2_10018061All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3055Open in IMG/M
3300003321|soilH1_10087041All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3769Open in IMG/M
3300004114|Ga0062593_100419181All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1205Open in IMG/M
3300004114|Ga0062593_100642468Not Available1022Open in IMG/M
3300004156|Ga0062589_101239998Not Available716Open in IMG/M
3300004463|Ga0063356_100078725Not Available3469Open in IMG/M
3300004463|Ga0063356_103144079Not Available711Open in IMG/M
3300004479|Ga0062595_100352152All Organisms → cellular organisms → Bacteria → Proteobacteria1026Open in IMG/M
3300004479|Ga0062595_101258740Not Available662Open in IMG/M
3300004479|Ga0062595_101806299Not Available581Open in IMG/M
3300004480|Ga0062592_102523270Not Available517Open in IMG/M
3300004643|Ga0062591_102596642Not Available534Open in IMG/M
3300005093|Ga0062594_103357395Not Available503Open in IMG/M
3300005175|Ga0066673_10353748Not Available857Open in IMG/M
3300005289|Ga0065704_10467849Not Available692Open in IMG/M
3300005329|Ga0070683_100729750All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069949Open in IMG/M
3300005330|Ga0070690_100366676All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi1049Open in IMG/M
3300005332|Ga0066388_107502429Not Available547Open in IMG/M
3300005343|Ga0070687_101463276Not Available512Open in IMG/M
3300005364|Ga0070673_101616399Not Available612Open in IMG/M
3300005365|Ga0070688_100335287Not Available1103Open in IMG/M
3300005458|Ga0070681_10744277All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069897Open in IMG/M
3300005459|Ga0068867_101419824Not Available644Open in IMG/M
3300005566|Ga0066693_10101479Not Available1038Open in IMG/M
3300005566|Ga0066693_10313347Not Available628Open in IMG/M
3300005587|Ga0066654_10208168Not Available1019Open in IMG/M
3300005587|Ga0066654_10335599Not Available819Open in IMG/M
3300005614|Ga0068856_100355414Not Available1484Open in IMG/M
3300005616|Ga0068852_101570157Not Available680Open in IMG/M
3300005618|Ga0068864_102377672Not Available536Open in IMG/M
3300005764|Ga0066903_105027719Not Available701Open in IMG/M
3300005840|Ga0068870_10435225Not Available861Open in IMG/M
3300005843|Ga0068860_102010470Not Available599Open in IMG/M
3300006031|Ga0066651_10119003All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1353Open in IMG/M
3300006046|Ga0066652_101967737Not Available522Open in IMG/M
3300006794|Ga0066658_10519143Not Available648Open in IMG/M
3300006806|Ga0079220_10850944Not Available699Open in IMG/M
3300006954|Ga0079219_11656218Not Available590Open in IMG/M
3300009156|Ga0111538_13232452Not Available567Open in IMG/M
3300009177|Ga0105248_11183104Not Available864Open in IMG/M
3300010322|Ga0134084_10238112All Organisms → cellular organisms → Bacteria652Open in IMG/M
3300010375|Ga0105239_13015277Not Available549Open in IMG/M
3300010400|Ga0134122_11814645Not Available642Open in IMG/M
3300010400|Ga0134122_12450713Not Available570Open in IMG/M
3300010400|Ga0134122_12632343Not Available554Open in IMG/M
3300010400|Ga0134122_12857255Not Available536Open in IMG/M
3300010400|Ga0134122_13102009Not Available519Open in IMG/M
3300010403|Ga0134123_10701464Not Available990Open in IMG/M
3300011119|Ga0105246_10320560All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1259Open in IMG/M
3300011119|Ga0105246_11300667Not Available674Open in IMG/M
3300012212|Ga0150985_116936643All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1227Open in IMG/M
3300012212|Ga0150985_121669185Not Available554Open in IMG/M
3300012469|Ga0150984_112521177Not Available844Open in IMG/M
3300012469|Ga0150984_118657501Not Available1125Open in IMG/M
3300012901|Ga0157288_10312843Not Available554Open in IMG/M
3300012907|Ga0157283_10059771All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales905Open in IMG/M
3300012916|Ga0157310_10043008Not Available1278Open in IMG/M
3300012951|Ga0164300_10566737Not Available663Open in IMG/M
3300012988|Ga0164306_11688810Not Available549Open in IMG/M
3300012989|Ga0164305_10474269Not Available978Open in IMG/M
3300013307|Ga0157372_12304514Not Available618Open in IMG/M
3300013308|Ga0157375_10989065Not Available981Open in IMG/M
3300014325|Ga0163163_11427754Not Available754Open in IMG/M
3300014325|Ga0163163_13320754Not Available502Open in IMG/M
3300014326|Ga0157380_12459891Not Available586Open in IMG/M
3300014326|Ga0157380_12909905Not Available545Open in IMG/M
3300015200|Ga0173480_10796732Not Available603Open in IMG/M
3300015371|Ga0132258_11632919All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD00691627Open in IMG/M
3300015371|Ga0132258_11766352All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1559Open in IMG/M
3300015371|Ga0132258_12112468All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1415Open in IMG/M
3300015371|Ga0132258_12326365All Organisms → cellular organisms → Bacteria → Proteobacteria1343Open in IMG/M
3300015371|Ga0132258_12843399Not Available1205Open in IMG/M
3300015372|Ga0132256_101509590Not Available783Open in IMG/M
3300015372|Ga0132256_101804834Not Available720Open in IMG/M
3300015374|Ga0132255_102970101Not Available724Open in IMG/M
3300015374|Ga0132255_103557577Not Available663Open in IMG/M
3300017792|Ga0163161_10731398Not Available826Open in IMG/M
3300017792|Ga0163161_10955392Not Available729Open in IMG/M
3300017965|Ga0190266_10189557Not Available971Open in IMG/M
3300017965|Ga0190266_11238804Not Available520Open in IMG/M
3300018067|Ga0184611_1033965Not Available1647Open in IMG/M
3300018067|Ga0184611_1065393All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1230Open in IMG/M
3300018067|Ga0184611_1074064Not Available1161Open in IMG/M
3300018422|Ga0190265_10183872All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2083Open in IMG/M
3300018431|Ga0066655_10448433Not Available852Open in IMG/M
3300018431|Ga0066655_10547229All Organisms → cellular organisms → Bacteria773Open in IMG/M
3300018431|Ga0066655_10672899Not Available700Open in IMG/M
3300018432|Ga0190275_10036759All Organisms → cellular organisms → Bacteria → Proteobacteria3982Open in IMG/M
3300018432|Ga0190275_10056946All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta3291Open in IMG/M
3300018432|Ga0190275_10183710Not Available1962Open in IMG/M
3300018432|Ga0190275_10472944All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1281Open in IMG/M
3300018432|Ga0190275_10728277All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1051Open in IMG/M
3300018432|Ga0190275_11850630All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069682Open in IMG/M
3300018466|Ga0190268_10855496All Organisms → cellular organisms → Bacteria699Open in IMG/M
3300018468|Ga0066662_10584480Not Available1041Open in IMG/M
3300018468|Ga0066662_10759654Not Available935Open in IMG/M
3300018468|Ga0066662_11370602Not Available730Open in IMG/M
3300018469|Ga0190270_10340510All Organisms → cellular organisms → Bacteria1358Open in IMG/M
3300018469|Ga0190270_10696536Not Available1007Open in IMG/M
3300018469|Ga0190270_12086870Not Available626Open in IMG/M
3300018476|Ga0190274_10253403Not Available1598Open in IMG/M
3300018476|Ga0190274_10471653All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 761245Open in IMG/M
3300018476|Ga0190274_11147532All Organisms → cellular organisms → Bacteria → Proteobacteria859Open in IMG/M
3300018476|Ga0190274_11768149All Organisms → cellular organisms → Bacteria → Proteobacteria713Open in IMG/M
3300018476|Ga0190274_12836898Not Available581Open in IMG/M
3300018481|Ga0190271_10098850All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae2681Open in IMG/M
3300018481|Ga0190271_10407823All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae1455Open in IMG/M
3300018481|Ga0190271_11245848All Organisms → cellular organisms → Bacteria → Proteobacteria865Open in IMG/M
3300018481|Ga0190271_11546113Not Available780Open in IMG/M
3300019361|Ga0173482_10001562All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium4658Open in IMG/M
3300019361|Ga0173482_10346490All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069671Open in IMG/M
3300023073|Ga0247744_1099478Not Available519Open in IMG/M
3300025898|Ga0207692_11199404Not Available504Open in IMG/M
3300025907|Ga0207645_11028764Not Available557Open in IMG/M
3300025920|Ga0207649_10137430All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1668Open in IMG/M
3300025930|Ga0207701_10692636Not Available863Open in IMG/M
3300025937|Ga0207669_10234345Not Available1357Open in IMG/M
3300025981|Ga0207640_10037384All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3054Open in IMG/M
3300026075|Ga0207708_10999686Not Available727Open in IMG/M
3300026075|Ga0207708_11669143All Organisms → cellular organisms → Bacteria560Open in IMG/M
3300026075|Ga0207708_11829248Not Available533Open in IMG/M
3300026078|Ga0207702_10309335All Organisms → cellular organisms → Bacteria → Proteobacteria1502Open in IMG/M
3300026078|Ga0207702_10590138Not Available1089Open in IMG/M
3300026095|Ga0207676_11886714Not Available596Open in IMG/M
3300026121|Ga0207683_11771671Not Available567Open in IMG/M
3300026142|Ga0207698_11019997Not Available839Open in IMG/M
3300026301|Ga0209238_1187122Not Available608Open in IMG/M
3300027266|Ga0209215_1005809Not Available1431Open in IMG/M
3300027326|Ga0209731_1049348All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria635Open in IMG/M
3300027517|Ga0209113_1026853All Organisms → cellular organisms → Bacteria → Proteobacteria791Open in IMG/M
3300031716|Ga0310813_10081969Not Available2464Open in IMG/M
3300031716|Ga0310813_10325578All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1303Open in IMG/M
3300031716|Ga0310813_10428040All Organisms → cellular organisms → Bacteria1144Open in IMG/M
3300031720|Ga0307469_10027782All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3222Open in IMG/M
3300031740|Ga0307468_100337157All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1117Open in IMG/M
3300032126|Ga0307415_102157335Not Available545Open in IMG/M
3300032205|Ga0307472_102216831Not Available554Open in IMG/M
3300033412|Ga0310810_10038885All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi5811Open in IMG/M
3300033412|Ga0310810_10059457All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales4640Open in IMG/M
3300033412|Ga0310810_10145675All Organisms → cellular organisms → Bacteria2759Open in IMG/M
3300033412|Ga0310810_10234410All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2036Open in IMG/M
3300033475|Ga0310811_10562858All Organisms → cellular organisms → Bacteria1163Open in IMG/M
3300033475|Ga0310811_10873649Not Available819Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil26.92%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil6.41%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil5.77%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil4.49%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil4.49%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere4.49%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil3.85%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere3.85%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.56%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.92%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.92%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.92%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.92%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.92%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.28%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.28%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil1.28%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.28%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.28%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere1.28%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere1.28%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.28%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.28%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere1.28%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.28%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.28%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.28%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere1.28%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere1.28%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.64%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.64%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.64%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere0.64%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.64%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.64%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.64%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.64%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.64%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.64%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.64%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.64%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.64%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001305Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300001686Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300002897Soil microbial communities from Manhattan, Kansas, USA - Sample 500um NexteraEnvironmentalOpen in IMG/M
3300003319Sugarcane bulk soil Sample L2EnvironmentalOpen in IMG/M
3300003321Sugarcane bulk soil Sample H1EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005289Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2Host-AssociatedOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005566Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142EnvironmentalOpen in IMG/M
3300005587Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103EnvironmentalOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006794Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300010322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012901Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1EnvironmentalOpen in IMG/M
3300012907Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1EnvironmentalOpen in IMG/M
3300012916Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300015200Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300017965Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 TEnvironmentalOpen in IMG/M
3300018067Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coexEnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018432Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 TEnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300019361Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)EnvironmentalOpen in IMG/M
3300023073Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S154-409C-5EnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300027266Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027326Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027517Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300030988Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_157 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300032126Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2Host-AssociatedOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M
3300033475Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YCEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI10216J12902_10765368123300000956SoilMFKTLIATLIIATASVALTAKVNAGPNQYPTQHELNYMDRASKIWDGGAQ*
JGI10216J12902_11273356723300000956SoilMFKTLIATLIIATASVALASKVNAGPTKYPTQAELNWMDRASANFDGGGPQ*
JGI10216J12902_11474919013300000956SoilMFKTIVATLILATASVALTSKVNAGPTDKYPTHAEQNYMDRASKIWDGGAQ*
C688J14111_1024199613300001305SoilMFKTLIATLILATASVALTSKVNAGPTPKYPTQAELNWMDRASQNTGGDVQ*
C688J18823_1037156823300001686SoilMFKTLIATLIVATASVALTAKVNAGPTQKYPTQAEQNWMDRASQLSGGDVQ*
C688J18823_1103323113300001686SoilLIATLILATASVALTSKVNAGPTQKYPTQAETNWMDRASQLSDSGAQ*
C688J35102_11877590813300002568SoilMFKTLIATLILATASVALASKVNAGPTSKYPTQAELNWMDRASQNTGGDVQ*
C688J35102_11942332213300002568SoilMIMFKTFVAALILATASVALTPKANAGPTTNHNPTQSEANYFDRASKVWDGGAQ*
C688J35102_12081977723300002568SoilMFKTLIATLILATASVALTSKVNAGPTTNHNPTQPEANYFDRASKVWDGGAQ*
JGI24804J43974_100210923300002897SoilMFKTFVATLILVTASVALTSKVNAGPTTNHNPTQPEANYFDRASKVWDGGAQ*
JGI24804J43974_100881223300002897SoilMFKTFIATLILATASVALTSNVNAGPASKYPSQAELNWMDRASQLSDAGAQ*
soilL2_1001806133300003319Sugarcane Root And Bulk SoilMFKTLIATLILATASVALTSKVNAGPTQKYPTQAETSWMDRASQLGGGDVQ*
soilH1_1008704153300003321Sugarcane Root And Bulk SoilMFKTFIVTLILATASVALTSKVNAGPITNHNPTQPEANYFDRASKVYDGGAQ*
Ga0062593_10041918123300004114SoilMFKTLIATLILATASVALTSKVNAGPTKFQNAAPTQGESNYMERASKIWDGGAQ*
Ga0062593_10064246823300004114SoilMFKTLIATLIIATASVALTAKVNAGPTDKYPTQAEQNWMDRASQLGGGDVQ*
Ga0062589_10123999813300004156SoilIATLILATASVALTSKVNAGPTQKYPTQAETNWMDRASQLSDSGAQ*
Ga0063356_10007872523300004463Arabidopsis Thaliana RhizosphereMFKTLIATLIIATASVALTAKVNAGPTQKHSVQEDLSYMDRASKIWDGGAQ*
Ga0063356_10314407913300004463Arabidopsis Thaliana RhizosphereMFKTLIATLILATASVALTSNVNAGPTQKYPTQAELNWMDRASQVSDAGAQ*
Ga0062595_10035215213300004479SoilMFKTLIATLIIATASVALTAKVNAGPTQKYPTQAELNWMDRASQNFDGGGPQ*
Ga0062595_10125874023300004479SoilMFAKTLFATLILATVSVALTPKVNAAPSAQPSQAELNWMDRASQVIDGGSL*
Ga0062595_10180629913300004479SoilMVKTLIATLILATASVALTSKVNAGPIGYQNSTFAQGDYMDRASKVWDGGAQ*
Ga0062592_10252327023300004480SoilMFKTIIATLILATASVALTSKVNAGPTDKYPTHAEQNYMDRASKIWDGGAQ*
Ga0062591_10259664223300004643SoilMFKTIIATLILATASVALTSKVNAGPTDKYPTQAEQNYMDRASKI
Ga0062594_10335739523300005093SoilMFKTLIATLILATASVALTSKVNAGPTQKYPTQAEHNWMDRASQLGGGD
Ga0066673_1035374833300005175SoilMFKALIATLILATASVALTSKVNAGPSEYQNPTFTPGDYMDRASKIWDGGAQ*
Ga0065704_1046784913300005289Switchgrass RhizosphereMFTKTLVAALVLASASLVLTSNVNAGPIKYPTQAELNWMDRA
Ga0070683_10072975013300005329Corn RhizosphereMFKTFIVTLILATASVALTSKVNAGPTTNHNPTQPEANYFDRASKVFDGGAQ*
Ga0070690_10036667623300005330Switchgrass RhizosphereMFTKTLVAALVLASASFVLTSNVNAGPIKHPTQAELNWMDRAS
Ga0066388_10750242913300005332Tropical Forest SoilMFKTVIATLIIATASVALASKVNAGPTDKYPTQAELNWMDRASQNFNGGGTQ*
Ga0070687_10146327623300005343Switchgrass RhizosphereLVAALVLASASFVLTSNVNAGPIKHPTQAELNWMDRASQVSDAGGL*
Ga0070673_10161639923300005364Switchgrass RhizosphereMFKTLIATLIIATASVALTAKVNAGPTSKYPTQAELNWMDRASQLSDAGAQ*
Ga0070688_10033528723300005365Switchgrass RhizosphereMFKIIIATLILATASVALTSKVNAGPTDKYPTQAEQNYMDRASKIWDGGAQ*
Ga0070681_1074427713300005458Corn RhizosphereMFKTFIVTLILATASVALTSKVNAGPTTNHNPTQPEANYFDRASKVYDGGAQ*
Ga0068867_10141982423300005459Miscanthus RhizosphereMFKTLIATLILATASVALTSNVNAGPTDKKYPTQAEQNWMDRASQLSDAGAQ*
Ga0066693_1010147933300005566SoilMFKTFIATLILATASVALTSNVNAGPTQKYPTQAESNWMDRASQLGGGDVQ*
Ga0066693_1031334713300005566SoilASVALTSKVNAGPTTNHNPTQPEANYFDRASKVWDGGAQ*
Ga0066654_1020816823300005587SoilVRSPQRTSIMFKTLVATLILATASVALTSKVNAGPTSKYPTQAELNWMDRASQNTGGDVQ
Ga0066654_1033559923300005587SoilMFKTLIATLIIATASVALTAKVNAGPTQKYPTQAEQNWMDRASQLSGGDVQ*
Ga0068856_10035541423300005614Corn RhizosphereMFKTLIATLILATASVALTSKVNAGPTQKSPSQAELSWMDRASQLGGGDVQ*
Ga0068852_10157015713300005616Corn RhizosphereRRIMFKTLIATLIIATASVALTAKVNAGPTDKYPTQAEQNWMDRASQLGGGDVQ*
Ga0068864_10237767223300005618Switchgrass RhizosphereMFKTLVAALILATASVALASKVNAGPTKYSNPATPQAESNYMDRASKSWDGGAQ*
Ga0066903_10502771923300005764Tropical Forest SoilMFKALIATLIVATASVALASKVNAGPAKYPTQEEQNYMDRASKIWDGGAQ*
Ga0068870_1043522523300005840Miscanthus RhizosphereMFKTIIATLILATASVALTSKVNAGPTDKYPTQAEQNYMDRASKIWDGGAQ*
Ga0068860_10201047013300005843Switchgrass RhizosphereMFTKTLVAALVLASASFVLTSNVNAGPIKHPTQAELNWMDRASQVSDAGGL*
Ga0066651_1011900323300006031SoilMFTKTLIAALILATTSVALTSKVNAAPTKHPSEAELNWMDRASKTFDGGAI*
Ga0066652_10196773723300006046SoilMFAKSLIAALILTTTSVALTSKVNAGPTEYQNPTFAPGDYMDRASKIWDGGAQ*
Ga0066658_1051914323300006794SoilMFKTLIATLILATASVALTSNVNAGPAQKYPTQAETNWMDRASQLSDSGAQ*
Ga0079220_1085094413300006806Agricultural SoilIATLILATASVALTAKANAGPTQKYPSQAELNWMDRASQVSDAGAQ*
Ga0079219_1165621813300006954Agricultural SoilMFKTFIATLILATASVALTAKANAGPTQKYPTQAEQNWMDRASAVSDAGAQ*
Ga0111538_1323245213300009156Populus RhizosphereMFKTVIATLIIATASVALASKVNAGPTQKYPTQAESNWMDRASQLSDAGAQ*
Ga0105248_1118310433300009177Switchgrass RhizosphereMFKALIATLIIATASVALTAKVNAGPTSKYPTQAELNWMDRASQLSDAGAQ*
Ga0134084_1023811223300010322Grasslands SoilFTKTLIAALILATTSVALTSKVNAAPTKHPSEAELNWMDRASKTFDGGAI*
Ga0105239_1301527713300010375Corn RhizosphereMFKTIIATLILATASVALTSKVNAGPTDKYPTPAEQNYMDRASKIWDGGAQ*
Ga0134122_1181464513300010400Terrestrial SoilMFKALVATLILATASVALTSKVNAGPTEYQNPTFTPGDYMDRASKIWDGGAQ*
Ga0134122_1245071313300010400Terrestrial SoilMFKTLIATLIIATASVALTAKVNAGPTQKYPTQAELNWMDRA
Ga0134122_1263234323300010400Terrestrial SoilMFKTLIATLILATASVALTSKVNAGPTDKYPTQAELNWMDRASQN
Ga0134122_1285725513300010400Terrestrial SoilMFKTLVAALILTTASVALTSKVNAGPTDKYPTHAEQNYMDRASKIWDGGAQ*
Ga0134122_1310200913300010400Terrestrial SoilMFKALIATLIVATASVALTAKVNAGPTSKYPTQAELNWMDRASQNTGGDVQ*
Ga0134123_1070146423300010403Terrestrial SoilMFNTIIATLILATASVALTSKVNAGPTDKYPTQAEQNYMDRASKIWDGGAQ*
Ga0105246_1032056013300011119Miscanthus RhizosphereTLILATASVALTSKVNAGPTDKYPTQAEQNYMDRASKIWDGGAQ*
Ga0105246_1130066723300011119Miscanthus RhizosphereTASVALTSKVNAGPTKYSNPATPQAESNYMDRASKSWDGGAQ*
Ga0150985_11693664323300012212Avena Fatua RhizosphereMFKTLIATLILATASVALTSKVNAGPTQKYPTQAETNWMDRASQLSDSGAQ*
Ga0150985_12166918523300012212Avena Fatua RhizosphereMFKTLVAALILATASVALTSKVNAGPTEYQNPTFAPGDYMDRASKIWDGGAQ*
Ga0150984_11252117733300012469Avena Fatua RhizosphereFKTLIATLILATASVALTSKVNAGPTTNHNPTQPEANYFDRASKVWDGGAQ*
Ga0150984_11865750123300012469Avena Fatua RhizosphereMFKTLIATLILATTSVALTCKVNAGPNDKYPSQAEQNWMDRASKVFDGGGPQ*
Ga0157288_1031284313300012901SoilFKTLIATLIIATASVALTAKVNAGPTQKYPTQAELNWMDRASQNFDGGGPQ*
Ga0157283_1005977133300012907SoilIMFKTLIATLILATASVALTSNVNAGPTDKKYPTQAEQNWMDRASQLGGGDVQ*
Ga0157310_1004300833300012916SoilMFKTLIATLIIATASVALTAKVNAGPTDKYPTQAAQNWMDRASQLGGGDVQ*
Ga0164300_1056673713300012951SoilMFKTLVAALILTTASVALTSKVNAGPTKYSNPATPQAESNYMDRASKIWDGGAQ*
Ga0164306_1168881013300012988SoilMFKTFIATLILATASVALTSKVNAGPTKHSAPAQAESNYFDRASKIWDGGAQ*
Ga0164305_1047426923300012989SoilMFKTFIATLILATASVALTSKVNAGPTDKYPTQAEQNYMDRASKIWDGGAQ*
Ga0157372_1230451413300013307Corn RhizosphereMFKTFIATLILATASVALTAKANAGPTQKYPSQAELNWMDRASQVSDAGAQ*
Ga0157375_1098906513300013308Miscanthus RhizosphereMFKTIIATLILATASVALTSKVNAGPTDKYPTQAEQNYRDRASKIWDGGAQ*
Ga0163163_1142775413300014325Switchgrass RhizosphereNLARPSTQRRRIMFKTLIATLILATASVALTSNVNAGPTDKKYPTQAEQNWMDRASQLSDAGAQ*
Ga0163163_1332075413300014325Switchgrass RhizosphereMFKTIIATLILATASVALTSKVNAGPTDKYPTQAEQNYMDRASKIWD
Ga0157380_1245989123300014326Switchgrass RhizosphereMFKTLVAALILATASVALTSKVNAGPTKYSNPATPQAESNYMDRASKIWDGGAQ*
Ga0157380_1290990523300014326Switchgrass RhizosphereMFKTLIATLILATASVALTSNVNAGPTDKKYPTQAEQNWMDRASQLSDAGAQ
Ga0173480_1079673213300015200SoilMFKTIIATLILATASVALTSKVNAGPNDKYPTHAEQNYMDRASKIWDGGAQ*
Ga0132258_1163291943300015371Arabidopsis RhizosphereMFKALVATLILATASVALTSKVNAGPTEYQNPVFQKGDYMDRASKIWDGGAQ*
Ga0132258_1176635233300015371Arabidopsis RhizosphereMFKALVATLILATASVALTSKVNAGPTTNHNPTQPEANYFDRASKVFDGGAQ*
Ga0132258_1211246823300015371Arabidopsis RhizosphereMFKTLIATLIVATAAVALTTKVNAGPTNKYPTQAEQNWMDRASQLSGGDVQ*
Ga0132258_1232636533300015371Arabidopsis RhizosphereMFKTLIATLIVATASVALATKVNAGPTKYPTQAELNWMDRASQVSDAGAQ*
Ga0132258_1284339933300015371Arabidopsis RhizosphereMFAKTLFATLILATVSVALAPKVNAAPSAQPSQAELSWMDRASQVVDGGGQ*
Ga0132256_10150959013300015372Arabidopsis RhizosphereMFKTLIATLILATASVALTSKVNAGPTQKYPAQSESNWMDRASQLSDAGAQ*
Ga0132256_10180483433300015372Arabidopsis RhizosphereMFKTLVAALILATASIALTSKVNAGPTDKYPTQAEQNYMERASKIWDGGAQ*
Ga0132255_10297010123300015374Arabidopsis RhizosphereMFKTLVAALILATASVALTSKVNAGPTKSSTPATPQAESNYMDRASKIWDGGAQ*
Ga0132255_10355757723300015374Arabidopsis RhizosphereMFKTLVATLILVTASVALTSKVNAGPTTNHNPTQPEANYFDRASKV*
Ga0163161_1073139813300017792Switchgrass RhizosphereMFKTIIATLILATASVALTSKVNAGPTDKYPTQAEQNYMDRASKIWDGGAQ
Ga0163161_1095539233300017792Switchgrass RhizosphereMFKTLIATLILATASVALTSNVNAGPTDKKYPTQAEQNWMDRASQLSDAGA
Ga0190266_1018955733300017965SoilMFKTIIATLILATASVALTSKVNAGPTQKYPTQAEQNWMDRASQLSDAGAQ
Ga0190266_1123880413300017965SoilMFKTLVAALILATASVALTSKVNAGPTTNPNPTQPEANYFDRASKVWDGGAQ
Ga0184611_103396523300018067Groundwater SedimentMFKTLVAALILATASVALTSKVNAGPTDKYPTHAEQNYMDRASKIWDGGAQ
Ga0184611_106539313300018067Groundwater SedimentMFKTVIATLIIATASVALASKVNAGPTQKYPTQAESNWMDRAAQLSDAGAQ
Ga0184611_107406433300018067Groundwater SedimentMFKTLIATLILATASVALTSRVNAGPTDKYPTHAEQNYMDRASKIWDGGAQ
Ga0190265_1018387243300018422SoilMFTKTLVAALVLASASLVLTSNVNAGPTKYPAQTELNWMDRASQVSDAGAQ
Ga0066655_1044843313300018431Grasslands SoilMFKALIATLILATASVALTSKVNAGPSEYQNPTFTPGDYMDRASKIWDGGAQ
Ga0066655_1054722913300018431Grasslands SoilQRRRTMFTKTLIAALILATTSVALTSKVNAAPTKHPSEAELNWMDRASKTFDGGAI
Ga0066655_1067289923300018431Grasslands SoilMFKTLIATLILATASVALTSKVNAGPTQKYPTQAETSWMDRASQLSDSGAQ
Ga0190275_1003675933300018432SoilMFKTVIATLIIATASVALASKVNAGPKYPTQAELTWMDRASQNFDGGGPQ
Ga0190275_1005694633300018432SoilMFKTFIATLILATASVALTSKVNAGPNEYPTHQESNYMDRASKIWDGGAQ
Ga0190275_1018371023300018432SoilMFKTLIATLILAAATVALTSNGNAGPTTNHDPAQPEANYFDRASKVWDGGAQ
Ga0190275_1047294433300018432SoilMFKTIIATLILATASVALTSKVNAGPTDKYPTHAEQNYMDRASKIWDGGAQ
Ga0190275_1072827713300018432SoilMFKTLIATLILATASVALTSKVNAGPTSNPATPQAESNYMDRASKIWDGGAQ
Ga0190275_1185063013300018432SoilMFKTLIATLILATASVALTSKVTAGPTDKYPTHAEQNYMDRASKIWDGGAQ
Ga0190268_1085549623300018466SoilMFKTLIATLILATASVALTSKVNADPTKYSNPATPQAESNYMDRASKIWDGGAQ
Ga0066662_1058448033300018468Grasslands SoilMFKTLIATLIVATASVALTAKVNAGPAQKYPTQAEQNWMDRASQLSDAGAQ
Ga0066662_1075965433300018468Grasslands SoilMFKTFIATLILATASVALTSKVNAGPTQKYPTQAETNWMDRASQLGGGDVQ
Ga0066662_1137060223300018468Grasslands SoilMFKTLIATLILATASVALTSNVNAGPAQKYPTQAETNWMDRASQLSDSGAQ
Ga0190270_1034051013300018469SoilMFKIIIATLIVATASVALTSKVNAGPTDKYPTHAEQNYMDRASKI
Ga0190270_1069653623300018469SoilMFKTFIATLILATASVALTSKVNARPTKYSNPAPAEVESNYMERASKIWDGGAQ
Ga0190270_1208687013300018469SoilMFKTLVAALILATASVALTSKVNAGPTDKYPTYAEQNYMDRASKIWDGGAQ
Ga0190274_1012696313300018476SoilPKHPMETTMFTKTLLAALVLASASLVLTSNVNAGPTKYPTQAELNWMDRASQVSDAGAQ
Ga0190274_1025340343300018476SoilMFKTLIATLILATASVALTSRVNAGPTDKYPTHAEQNYMDRASKIWDAGAQ
Ga0190274_1047165343300018476SoilMFKTIIATLILATASVALTSKVNAGPTDKYPTHAEQNYMDRASK
Ga0190274_1114753233300018476SoilMFKTVIATLIIATASVALASKVNAGPTQKYPTQAESNWIDRASQLSDAGAQ
Ga0190274_1176814923300018476SoilMFKTFIATLILATASVALTSKVNAGPNEYPTHQESNYM
Ga0190274_1283689813300018476SoilMFTKTLFAALILASASLALTAKVNAGPSAPTQAELNWMDRASQLSDAGAI
Ga0190271_1009885013300018481SoilMFKTLIATLIIATASVALASKVNAGPTKYPTQAELSWMDRASANFDGGGPQ
Ga0190271_1040782333300018481SoilMFKTIIATLILATASVALTSKVNAGPTDKYPTHAEQNYMDR
Ga0190271_1124584823300018481SoilMFKTFIATLILATASVALTSKVNAGPNQYPTHQETNYMDRASKIWDGGAQ
Ga0190271_1154611313300018481SoilMFKTVIATLIIATASVALASKVNAGPTQKYPTQAESNWMDRASQLSDAGAQ
Ga0173482_1000156253300019361SoilMFKTLIATLIIATASVALTAKVNAGPTDKYPTQAEQNWMDRASQLGGGDVQ
Ga0173482_1034649023300019361SoilMFKALVATMILATASVALTSKVNAGPTKYSNPATPQAESNYMDRASKIWDGGAQ
Ga0247744_109947813300023073SoilMFTKTLVAALVLASASLVLTSNVNAGPIKYPTQAELNWMDRASQVSDSGAQ
Ga0207692_1119940413300025898Corn, Switchgrass And Miscanthus RhizosphereKTLVATLILTAASVALTSKVNAGPTPKYPTQAELNWMDRASQNTGGDVQ
Ga0207645_1102876413300025907Miscanthus RhizosphereMFKTIIATLILATASVALTSKVNAGPTEKYPTHAEQNYMDRASKIWDGGAQ
Ga0207649_1013743043300025920Corn RhizosphereFKTLIATLIIATASVALTAKVNAGPTDKYPTQAEQNWMDRASQLGGGDVQ
Ga0207701_1069263623300025930Corn, Switchgrass And Miscanthus RhizosphereQAPHGDSIMFKTIIATLILATASVALTSKVNAGPTDKYPTQAEQNYMDRASKIWDGGAQ
Ga0207669_1023434533300025937Miscanthus RhizosphereMFKTIIATLILATASVALTSKVNAGPTQKYPTQAEQNWMDRASQLSDAGGAQ
Ga0207640_1003738453300025981Corn RhizosphereMIKSLIATLIIATASVALTAKVNAGPTDKYPTQAEQNWMDRASQLGGGDVQ
Ga0207708_1099968613300026075Corn, Switchgrass And Miscanthus RhizosphereMFKTIIATLILATASVGLTSKVNAGPTDKYPTHAEQNYMDRASKIWDGGAQ
Ga0207708_1166914323300026075Corn, Switchgrass And Miscanthus RhizosphereMFKTLIAALILATASVALTSKVNAGPTEYQNPVFQHGDYMDRASKVWDGGAQ
Ga0207708_1182924813300026075Corn, Switchgrass And Miscanthus RhizosphereLILATASVALTSNVNAGPTDKKYPTQAEQNWMDRASQLSDAGAQ
Ga0207702_1030933513300026078Corn RhizosphereMFKTFIVTLILATASVALTSKVNAGPTTNHNPTQPEANYFDRASKVFDGGAQ
Ga0207702_1059013833300026078Corn RhizosphereMFKTLIATLILATASVALTSKVNAGPTQKSPSQAELSWMDRASQLGGGDV
Ga0207676_1188671423300026095Switchgrass RhizosphereMFKTLVAALILATASVALASKVNAGPTKYSNPATPQAESNYMDRASKSWDGGAQ
Ga0207683_1177167113300026121Miscanthus RhizosphereMFKTLIATLILATASVALTSNVNAGPTDKKYPTQAEQNWMDRASHL
Ga0207698_1101999733300026142Corn RhizosphereMFKALIATLIIATASVALTAKVNAGPTDKYPTQAEQNWMDRASQLGGGDVQ
Ga0209238_118712223300026301Grasslands SoilMFKTFIATLILATASVALTSNVNAGPTQKYPTQAESNWMDRASQLGGGDVQ
Ga0209215_100580913300027266Forest SoilMFKTVIATLIIATASVALASKVNAGPTQKYPTQAELNWMDRASQNFDGGGSQ
Ga0209731_104934813300027326Forest SoilMFKALVATLILATASVALTSKVSAGPTSNYPTQAELNWMDRASQNTGGDVQ
Ga0209113_102685323300027517Forest SoilSTYRRLIMFKALIATLIVATASVALASKVNAGPTKQPTQEELNYMDRASKIWDGGAQ
Ga0308183_109872913300030988SoilTVIAPRPPKHPGDADMLTKTLLAALILASTSVALTSRVNAGPKAPTAAEINWMERASQVVDGGGN
Ga0310813_1008196923300031716SoilMFKTLIATLILATASVALTSKVNAGPTQKYPAQSESNWMDRASQLGGGDVQ
Ga0310813_1032557823300031716SoilMFKTLIATLILATASVALTSKVNAGPTKFQNAAPTQGESNYMERASKIWDGGAQ
Ga0310813_1042804033300031716SoilMFKTLVATLILATASVALASKVNAGPTTNHEPTQPESNYFDRASKVFDGGAQ
Ga0307469_1002778213300031720Hardwood Forest SoilMFKTLIATLILATASVALTSNVNAGPTGKYPTQAETNWMDRASQLSDAGAQ
Ga0307468_10033715713300031740Hardwood Forest SoilMFTKTLFAALILATASVALTSKVNAGPTQKYPTQAETNWMDRASQLSDAGAQ
Ga0307415_10215733513300032126RhizosphereMFTKTLVAALVLASASLVLTSNVNAGPAKYPTHADLNWMDRASQVSDSGAQ
Ga0307472_10221683113300032205Hardwood Forest SoilMFKALIATLIIATASVALTAKVNAGPTSKYPTQAELNWMDRASQLSDAGAQ
Ga0310810_1003888513300033412SoilMFKTLIATLILATASVALTSKVNAGPTQKYPTQAESNWMDRASQLAGGDVQ
Ga0310810_1005945753300033412SoilMFKTFIVTLILATASVALTSKVNAGPTTNHNPTQPEANYFDRASK
Ga0310810_1014567523300033412SoilMFKTLVATLILATASVALASKVNAGPTTNHNPTQPESNYFDRASKVFDGGAQ
Ga0310810_1023441033300033412SoilGPRPRNHPTEIIMFKTFIVTLILATASVALTSKVNAGPTTNHNPTQPEANYFDRASKVFDGGAQ
Ga0310811_1056285813300033475SoilMFKTLVATLILATASVALASKVNAGPTTNHNPTQPESNYFDRASKVFDGGA
Ga0310811_1087364923300033475SoilPKHPTETLIMFKTLIATLILATASVALTSKVNAGPTQKSPSQAELSWMDRASQLGGGDVQ


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