Metagenome Family F043280

Basic Information
Family ID	F043280
Family Type	Metagenome
Number of Sequences	156
Average Sequence Length	40 residues
Representative Sequence	MATNIDKALYQQPTGIDALAQDEEAIEIEIVDPEEVNI
Number of Associated Samples	126
Number of Associated Scaffolds	156

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	89.80 %
% of genes near scaffold ends (potentially truncated)	94.23 %
% of genes from short scaffolds (< 2000 bps)	83.33 %
Associated GOLD sequencing projects	119
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.27

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (57.692 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (17.949 % of family members)
Environment Ontology (ENVO)	Unclassified (57.692 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (56.410 % of family members)

Multiple Sequence Alignments

Select alignment to view:

Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62. 1JGIcombinedJ13530_1077157441 2JGI1221J15618_12273902 3JGI24890J29729_10505841 4JGI26470J50227_10159951 5Ga0007846_10024822 6Ga0007842_10046191 7Ga0007856_10083201 8Ga0065171_10131323 9Ga0065171_10696731 10Ga0007804_11420861 11Ga0007809_100228473 12Ga0078894_109561231 13Ga0007819_10456603 14Ga0007815_10440661 15Ga0007866_10633844 16Ga0007852_11189052 17Ga0075464_108324861 18Ga0075459_10102573 19Ga0075459_10910431 20Ga0075473_103255901 21Ga0070748_10036951 22Ga0070748_10265921 23Ga0070748_10941072 24Ga0070748_11963181 25Ga0070748_12979852 26Ga0070745_11250951 27Ga0075458_101511522 28Ga0075458_102686041 29Ga0099846_12242581 30Ga0102875_12744782 31Ga0102859_10346531 32Ga0102859_10982272 33Ga0114346_12784501 34Ga0114350_10196824 35Ga0114355_12315292 36Ga0114841_12130481 37Ga0105093_103205252 38Ga0105099_1000661010 39Ga0105099_105492491 40Ga0114962_102184681 41Ga0114968_105593891 42Ga0114970_102590461 43Ga0105102_107519511 44Ga0105102_108633851 45Ga0105104_100714063 46Ga0073936_106580221 47Ga0114959_100281866 48Ga0114976_106048162 49Ga0114971_104190571 50Ga0114960_100998392 51Ga0133913_113330883 52Ga0139556_10216482 53Ga0157140_100087641 54Ga0157138_10061421 55Ga0157208_100037391 56Ga0153916_125854642 57Ga0119960_10113201 58Ga0181364_10297992 59Ga0181362_10324142 60Ga0181365_10385741 61Ga0181352_10638572 62Ga0181352_10956291 63Ga0181352_11235293 64Ga0181344_10706501 65Ga0181344_11449392 66Ga0181356_10170745 67Ga0181343_11233631 68Ga0181357_10201701 69Ga0181357_10354111 70Ga0181357_12077351 71Ga0181357_12930511 72Ga0181346_11389442 73Ga0181348_12516082 74Ga0181355_11397303 75Ga0181359_10672292 76Ga0181359_12686442 77Ga0207193_18663561 78Ga0211734_112068062 79Ga0211733_102561572 80Ga0211726_109949331 81Ga0211729_104899601 82Ga0214255_10372271 83Ga0214172_10438053 84Ga0194048_102343081 85Ga0222714_101677762 86Ga0222714_103239882 87Ga0222714_104275001 88Ga0222713_101167603 89Ga0181354_10128781 90Ga0181354_10785132 91Ga0181354_11590291 92Ga0181354_12499532 93Ga0181351_11158702 94Ga0181351_12058352 95Ga0228703_10207933 96Ga0255168_10671332 97Ga0209697_105683532 98Ga0208738_10331931 99Ga0208871_10276152 100Ga0208256_10283832 101Ga0208251_10233112 102Ga0208745_10073582 103Ga0208424_10076313 104Ga0208497_10181781 105Ga0208105_10703152 106Ga0207954_10977372 107Ga0208428_11320952 108Ga0208386_10403611 109Ga0208544_100178495 110Ga0208923_10964381 111Ga0255075_10406512 112Ga0208966_10963081 113Ga0209188_11967492 114Ga0209297_13685201 115Ga0209087_12175031 116Ga0209087_12908362 117Ga0209084_13338742 118Ga0209288_103022091 119Ga0209829_103880142 120Ga0209246_101099111 121Ga0209972_103641931 122Ga0209777_105286871 123Ga0209777_109105612 124Ga0209702_101294232 125Ga0315907_101239341 126Ga0315900_103380051 127Ga0315904_101295291 128Ga0315294_106549691 129Ga0315901_102725081 130Ga0315274_102300573 131Ga0315903_104364061 132Ga0315903_105752661 133Ga0315903_108164131 134Ga0315903_109211662 135Ga0316218_12024492 136Ga0315295_112720331 137Ga0315268_104437472 138Ga0315268_115619382 139Ga0315276_123496042 140Ga0315271_117966693 141Ga0316226_13235972 142Ga0316228_11681391 143Ga0316232_13052622 144Ga0334992_0476936_420_542 145Ga0334987_0261445_1050_1172 146Ga0334995_0090879_2231_2341 147Ga0335010_0436368_3_131 148Ga0335012_0575044_3_107 149Ga0335031_0386572_746_883 150Ga0335036_0413689_744_863 151Ga0335056_0248269_902_1006 152Ga0335061_0530521_480_596 153Ga0335065_0329132_826_957 154Ga0335065_0446053_644_784 155Ga0335049_0438532_727_846 156Ga0335048_0092156_1733_1837
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62. 1JGIcombinedJ13530_1077157441 2JGI1221J15618_12273902 3JGI26470J50227_10159951 4Ga0007846_10024822 5Ga0007842_10046191 6Ga0065171_10131323 7Ga0007804_11420861 8Ga0078894_109561231 9Ga0075464_108324861 10Ga0070748_10036951 11Ga0070748_10265921 12Ga0070748_10941072 13Ga0070748_11963181 14Ga0099846_12242581 15Ga0102859_10982272 16Ga0114346_12784501 17Ga0114355_12315292 18Ga0114841_12130481 19Ga0105099_1000661010 20Ga0114962_102184681 21Ga0105102_108633851 22Ga0105104_100714063 23Ga0114959_100281866 24Ga0114971_104190571 25Ga0133913_113330883 26Ga0139556_10216482 27Ga0157138_10061421 28Ga0157208_100037391 29Ga0119960_10113201 30Ga0181352_10638572 31Ga0181344_10706501 32Ga0181356_10170745 33Ga0181357_10201701 34Ga0181346_11389442 35Ga0181348_12516082 36Ga0181355_11397303 37Ga0211733_102561572 38Ga0214172_10438053 39Ga0181354_10128781 40Ga0181354_10785132 41Ga0181354_12499532 42Ga0181351_12058352 43Ga0228703_10207933 44Ga0255168_10671332 45Ga0208738_10331931 46Ga0208871_10276152 47Ga0208256_10283832 48Ga0208497_10181781 49Ga0208428_11320952 50Ga0208544_100178495 51Ga0208923_10964381 52Ga0208966_10963081 53Ga0315274_102300573 54Ga0315903_104364061 55Ga0315903_109211662 56Ga0315295_112720331 57Ga0316226_13235972 58Ga0316232_13052622 59Ga0335012_0575044_3_107 60Ga0335061_0530521_480_596
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38 1Ga0211726_109949331 2JGIcombinedJ13530_1077157441 3JGI1221J15618_12273902 4JGI24890J29729_10505841 5JGI26470J50227_10159951 6Ga0007842_10046191 7Ga0065171_10696731 8Ga0007804_11420861 9Ga0078894_109561231 10Ga0075459_10102573 11Ga0075459_10910431 12Ga0075473_103255901 13Ga0070748_10036951 14Ga0070748_11963181 15Ga0099846_12242581 16Ga0114346_12784501 17Ga0114350_10196824 18Ga0114841_12130481 19Ga0105093_103205252 20Ga0105099_1000661010 21Ga0114962_102184681 22Ga0114968_105593891 23Ga0105102_108633851 24Ga0114971_104190571 25Ga0114960_100998392 26Ga0157140_100087641 27Ga0157138_10061421 28Ga0157208_100037391 29Ga0153916_125854642 30Ga0119960_10113201 31Ga0181362_10324142 32Ga0181352_10638572 33Ga0181352_11235293 34Ga0181356_10170745 35Ga0181357_10201701 36Ga0181357_10354111 37Ga0181346_11389442 38Ga0181348_12516082 39Ga0181355_11397303 40Ga0181359_12686442 41Ga0211734_112068062 42Ga0211733_102561572 43Ga0211729_104899601 44Ga0214172_10438053 45Ga0194048_102343081 46Ga0222714_103239882 47Ga0181354_10128781 48Ga0181354_10785132 49Ga0181354_11590291 50Ga0181354_12499532 51Ga0181351_12058352 52Ga0228703_10207933 53Ga0255168_10671332 54Ga0209697_105683532 55Ga0208738_10331931 56Ga0208871_10276152 57Ga0208256_10283832 58Ga0208497_10181781 59Ga0208105_10703152 60Ga0207954_10977372 61Ga0208428_11320952 62Ga0208544_100178495 63Ga0208923_10964381 64Ga0255075_10406512 65Ga0208966_10963081 66Ga0209188_11967492 67Ga0209297_13685201 68Ga0209084_13338742 69Ga0209288_103022091 70Ga0209777_105286871 71Ga0209777_109105612 72Ga0315294_106549691 73Ga0315901_102725081 74Ga0315274_102300573 75Ga0315903_109211662 76Ga0315295_112720331 77Ga0315276_123496042 78Ga0316226_13235972 79Ga0334987_0261445_1050_1172 80Ga0335012_0575044_3_107 81Ga0335061_0530521_480_596 82Ga0335049_0438532_727_846 83Ga0335048_0092156_1733_1837
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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 25.76% β-sheet: 0.00% Coil/Unstructured: 74.24%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.27
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.27
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Pfam ID	Name	% Frequency in 156 Family Scaffolds
PF03237	Terminase_6N	83.33
PF01726	LexA_DNA_bind	0.64
PF13403	Hint_2	0.64

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	42.31 %
Unclassified	root	N/A	57.69 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	2.56 %
Unclassified	root	N/A	57.69 %
Viruses	superkingdom	All Organisms → Viruses	39.74 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.56 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	26.28 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.46 %
Unclassified	root	N/A	57.69 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.92 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	26.28 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.46 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.64 %
Unclassified	root	N/A	57.69 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.64 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	1.92 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.46 %
Unclassified	root	N/A	57.69 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	26.28 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.64 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.92 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	26.28 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.46 %
Unclassified	root	N/A	57.69 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.64 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	7.69 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	1.92 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.46 %
Unclassified	root	N/A	57.69 %
unclassified Caudoviricetes	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes	16.67 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.64 %
Caudoviricetes sp.	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.	16.67 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	1.92 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.46 %
Unclassified	root	N/A	57.69 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7.69 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.64 %
Caudoviricetes sp.	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.	16.67 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	1.92 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.46 %
Unclassified	root	N/A	57.69 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7.69 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.64 %
Caudoviricetes sp.	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.	16.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.46 %
Unclassified	root	N/A	57.69 %
unclassified Flavobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae	1.92 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7.69 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.64 %
Caudoviricetes sp.	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.	16.67 %
Flavobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	1.92 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.46 %
Unclassified	root	N/A	57.69 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7.69 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001213\|JGIcombinedJ13530_107715744	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.	523	Open in IMG/M
3300001523\|JGI1221J15618_1227390	Not Available	1049	Open in IMG/M
3300002307\|JGI24890J29729_1050584	Not Available	760	Open in IMG/M
3300003375\|JGI26470J50227_1015995	Not Available	1742	Open in IMG/M
3300003798\|Ga0007842_1004619	All Organisms → Viruses → Predicted Viral	1015	Open in IMG/M
3300003815\|Ga0007856_1008320	Not Available	713	Open in IMG/M
3300004692\|Ga0065171_1013132	All Organisms → Viruses → Predicted Viral	1326	Open in IMG/M
3300004692\|Ga0065171_1069673	Not Available	556	Open in IMG/M
3300004807\|Ga0007809_10022847	Not Available	2181	Open in IMG/M
3300005662\|Ga0078894_10956123	Not Available	740	Open in IMG/M

Showing 1 to 10 of 147 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	83.33%
Marine	Environmental → Aquatic → Marine	16.03%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	0.64%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	10.26%
Creek	Environmental → Aquatic → Freshwater → Creek	0.64%
Hypersaline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline	0.64%
Ice	Environmental → Aquatic → Freshwater → Ice	0.64%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	2.56%
Lake	Environmental → Aquatic → Freshwater → Lake	30.13%
Lentic	Environmental → Aquatic → Freshwater → Lentic	37.82%
Lotic	Environmental → Aquatic → Freshwater → Lotic	1.92%
River	Environmental → Aquatic → Freshwater → River	1.28%
Sediment	Environmental → Aquatic → Freshwater → Sediment	4.49%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	5.77%
Unclassified	Environmental → Aquatic → Marine → Unclassified	2.56%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.64%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.64%

Habitat	Taxonomy	Distribution
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	0.64%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	2.56%
Glacial Lake	Environmental → Aquatic → Freshwater → Ice → Glacial Lake	0.64%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	3.21%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	5.13%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	2.56%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.64%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	31.41%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	25.00%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	10.26%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	5.77%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	4.49%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	2.56%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	1.92%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	1.28%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.64%
Unclassified	Environmental → Aquatic → Freshwater → Creek → Unclassified	0.64%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Unclassified	0.64%

Habitat	Taxonomy	Distribution
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	0.64%
Aquatic	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Aquatic	0.64%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	10.26%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	2.56%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	2.56%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	12.18%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	8.33%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	5.13%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	3.21%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	3.21%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	1.92%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater	1.28%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	1.28%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	0.64%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater	0.64%
Freshwater	Environmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater	0.64%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	17.95%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	8.97%
Freshwater Lake Hypolimnion	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion	1.28%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	1.28%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment	0.64%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	0.64%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	4.49%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.64%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	2.56%
Hypersaline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Unclassified → Hypersaline	0.64%
Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Lentic	0.64%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	4.49%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.64%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300001523	Hypersaline microbial communities from Lake Vida, Antarctica - Brine Hole Two >0.2 micron	Environmental	Open in IMG/M
3300002307	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-C2 co-culture F-D7	Environmental	Open in IMG/M
3300003375	Freshwater actinobacteria microbial communities from Trout Bog Lake, Wisconsin, USA - enrichment TB-E6	Environmental	Open in IMG/M
3300003797	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE19Jun07	Environmental	Open in IMG/M
3300003798	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Sep07	Environmental	Open in IMG/M
3300003815	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jun07	Environmental	Open in IMG/M
3300004692	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Jun07 (version 2)	Environmental	Open in IMG/M
3300004770	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE25Aug07	Environmental	Open in IMG/M
3300004807	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE02Aug07	Environmental	Open in IMG/M

Showing 1 to 10 of 126 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ13530_1077157441	3300001213	Wetland	MATNIDKALYQQPQGIADAAENEEPIEIEIIDPEEVNIHAG
JGI1221J15618_12273902	3300001523	Hypersaline	MATNIDRVLNQQPMGIEELAQNEEPIEIEIVDPEAVNISVGDL
JGI24890J29729_10505841	3300002307	Lentic	MAIDKGLYQAPQGIEDLAQNEEPIEIEIIDPEEVDIHAGDT
JGI26470J50227_10159951	3300003375	Freshwater	MATNIDKALYSDTQGAGPDQADEPIEIEIVDPEAVKIHAGDMEMELKPDGEGD
Ga0007846_10024822	3300003797	Freshwater	LYQAPEGIDALAAKEQPLEIEVVNPEEVTIGMDGLEITLTPDX*
Ga0007842_10046191	3300003798	Freshwater	MATNIDKALYSDNQGIAAAHSDEPIEIEVIDPEAVKIHAGDLDIEIKPD
Ga0007856_10083201	3300003815	Freshwater	MATNIDKALYSDTQGIAAQHSDEPIEIEVIDPEAVHITAGDMELDIEKA
Ga0065171_10131323	3300004692	Freshwater	MATNIDKALYSDTQGADPSHIDEPIEIEIVDPEAVKIHAG
Ga0065171_10696731	3300004692	Freshwater	MATNIDKALYSDTQGADPSHVDEPIEIEIVDPEAVKIHAG
Ga0007804_11420861	3300004770	Freshwater	MAIDKALYQAPEGIDALAAKEVPLEIEVVNPEEVTIGMDG
Ga0007809_100228473	3300004807	Freshwater	MATNIDKALYSDTQGADPSHIDEPIEIEIVDPEAVKIHAGDL
Ga0078894_109561231	3300005662	Freshwater Lake	MATNIDKALYQQPAGLDELAYHQEPIEIEIIDPEAVRIDMGDVEID
Ga0007819_10456603	3300006105	Freshwater	MAIDKGLYQAPQGIEDLAQNEEPIEIEIIDPEEVDIHAG
Ga0007815_10440661	3300006114	Freshwater	MAIDKGLYQAPQGIEDLAQNEEPIEIEIIDPEEVDIH
Ga0007866_10633844	3300006119	Freshwater	MATNIDKALYSDTQGADPSHVDEPIEIEIVDPEAVKIHAGDL
Ga0007852_11189052	3300006123	Freshwater	MAIDKALYQAPEGIDALAAKEVPLEIEVVNPEEVTIGMD
Ga0075464_108324861	3300006805	Aqueous	MATNIDKALFQAPQGLESEAEGAEPIEIEIVDPEEVNISAGDL
Ga0075459_10102573	3300006863	Aqueous	MATNIDKALFQAPQGLESEAEGAEPIEIEIVDPEEVNIS
Ga0075459_10910431	3300006863	Aqueous	MATNIDKALYQNPQGIAGAAENEEPIEIEVIDPEQV
Ga0075473_103255901	3300006875	Aqueous	MATNIDKALYQNPVGMEEAAQNEEPIEIEIVDPEAVNIHA
Ga0070748_10036951	3300006920	Aqueous	MATNIDKALYQTPTGLEESMDAEPIEIEIVDPEEVTIGM
Ga0070748_10265921	3300006920	Aqueous	MATNIDKALYQQPQGIDDLARGEPELEIEIVDPEE
Ga0070748_10941072	3300006920	Aqueous	MATNIDKALYQAPMGLDDMGDEGIEIEIVDPESVKI
Ga0070748_11963181	3300006920	Aqueous	MATNIYKALDQQPQGIDELGEQEEAVEIEIIDPEE
Ga0070748_12979852	3300006920	Aqueous	MATNVDKALYQQPAGIDALAQDESPLEIEIVDPEEV
Ga0070745_11250951	3300007344	Aqueous	MATNIDKALFQAPQGLESEAEGAEPIEIEIIDPEEVNISAGD
Ga0075458_101511522	3300007363	Aqueous	MATNIDKALFQAPQGLESEAEGTEPIEIEIVDPEEVNISA
Ga0075458_102686041	3300007363	Aqueous	MATNIDKALYQNPQGIAGAAENEEPIEIEVIDPEQ
Ga0099846_12242581	3300007542	Aqueous	MATNIDKALYQQPLGIEELAQEESPLEIEIVDPEEVTIG
Ga0102875_12744782	3300007547	Estuarine	MATNIDKALYQQPMGIDALGEQESPLEIEIVDPEEVTIGMDG
Ga0102859_10346531	3300007708	Estuarine	MATNIDKALYQQPLGIDALGEQESPHEIEIVDPEEDT
Ga0102859_10982272	3300007708	Estuarine	MATNIDKALFQQPQGMESLAQDEEAIEIEIVDPEAVN
Ga0114346_12784501	3300008113	Freshwater, Plankton	MATNIDKALYQLPAGLDDGMEDESIEIEIEDPESVTVGLG
Ga0114350_10196824	3300008116	Freshwater, Plankton	MATNIDKALYQQPMGIDAAAIKEEPIEIEIIDPEAVNIDMGGL
Ga0114355_12315292	3300008120	Freshwater, Plankton	MATNIDKALFQQPTGIDAAGEAEEPIEIEIVDPEAVNIDMGD
Ga0114841_12130481	3300008259	Freshwater, Plankton	MATNIDKALFQSPVGIADDAEGIEPIEIEIVDPEAVHIEAGDLEI
Ga0105093_103205252	3300009037	Freshwater Sediment	MATNIDKALFQQPMGIDAAGEMEEPIEIEIVDPEAVHIDMGDVEIDIEK
Ga0105099_1000661010	3300009082	Freshwater Sediment	MATNIDKALFQQPQGIESLAQDESPIEIEIVDPEAVHIDLGDTEIS
Ga0105099_105492491	3300009082	Freshwater Sediment	MATNIDKALFQQPLGMEELAGEAEPIEIEIIDPEAVHIDLGDIEI
Ga0114962_102184681	3300009151	Freshwater Lake	MATNVDKALYQQPAGIDSLGAEEAPLEIEIVDPEEVN
Ga0114968_105593891	3300009155	Freshwater Lake	MATNIDKALYQQPQGMEELAQDEDAIEIEIIDPEAVNISIGDLEISM
Ga0114970_102590461	3300009163	Freshwater Lake	MATNIDKALYQAPMGLGDMGEEAIEIEIVDPESVKIGIGGIE
Ga0105102_107519511	3300009165	Freshwater Sediment	MATNIDKALYQQPVGIDALGEQETPLEIEIVDPEEVTIGMD
Ga0105102_108633851	3300009165	Freshwater Sediment	LRKIPNMPTNIDKALYTAPTGIAAAAENEEPIEIEIIDPEEVNIQAG
Ga0105104_100714063	3300009168	Freshwater Sediment	MATNIDKALYQQPMGLAATNEEPIEIEIIDPEAVNINMGDVEINIEKG
Ga0073936_106580221	3300009175	Freshwater Lake Hypolimnion	MATNIDKALYSDTQGIASAHADEPIEIEVVDPEAVNIHAGDLDIE
Ga0114959_100281866	3300009182	Freshwater Lake	MATSNFDKAIYQAPQGIDALAQEEEPLEIEIVDPEEV
Ga0114976_106048162	3300009184	Freshwater Lake	MATNIDKALYQQPTGIDALAQNEDAIEIEIVDPEEVNIR
Ga0114971_104190571	3300009185	Freshwater Lake	MATNIDKSLYRAPQGIDTLAAQEEPLEIEIVDPEA
Ga0114960_100998392	3300010158	Freshwater Lake	MMATNIDKALYQQPQGIESLAQDEEPIEIEIIDPEAVNIHAGDLDIS
Ga0133913_113330883	3300010885	Freshwater Lake	MATNIDKALYQQPQGIEELAQDQPEDFEIEIIDPEEV
Ga0139556_10216482	3300011011	Freshwater	MATNIDKALYQAPMGLESAEEEAIEIEIIDPEEVN
Ga0157140_100087641	3300012348	Freshwater	MATNIDKALFQQPTGIDALGQAEEPIEIEIIDPEAVNIHADGLD
Ga0157138_10061421	3300012352	Freshwater	MATNIDKALFQQPIGMEELAGAAEPIEIEIIDPEAVHIDLG
Ga0157208_100037391	3300012667	Freshwater	MSIDKALYQAPAGLDALAQDEEAIEIEIVDPEEVN
Ga0153916_125854642	3300012964	Freshwater Wetlands	MATNIDKALYQQPAGLDDLAEAQEPIEIEIIDPEAVNIGIGDMEISIE
Ga0119960_10113201	3300014811	Aquatic	MATNIDKALYQQPVGIDALGEQESPLEIEIVAPDRDWE
Ga0181364_10297992	3300017701	Freshwater Lake	MATNIDKALYQQPQGIDELGEQEEAVEIEIIDPEEVNIEGPG
Ga0181362_10324142	3300017723	Freshwater Lake	MATNVDKGLYQAPLGIDALAEDEEAIEIEIVDPEEV
Ga0181365_10385741	3300017736	Freshwater Lake	MATNIDKALYQQPQGMEELAQDEDAIEIEIIDPEAVN
Ga0181352_10638572	3300017747	Freshwater Lake	MATNIDKALYQAPVSIEELAQDEEPIEIEIIDPEQVNIHAGGLDLSITP
Ga0181352_10956291	3300017747	Freshwater Lake	MATNIDKALFQSPVGIADDAEGIEPIEIEIVDPEAVHIEAGDLEIDIE
Ga0181352_11235293	3300017747	Freshwater Lake	MATNIDKALYQQPQGMEELAQEEEAVEIEIVDPEA
Ga0181344_10706501	3300017754	Freshwater Lake	MATNIDKALFQQPQGIDALAEDEQGIEIEIVDPESVSIEGPGFAIE
Ga0181344_11449392	3300017754	Freshwater Lake	MMATNIDKALYQQPQGIESLAQDEEAIEIEIIDPEAVNIHAGDLDISI
Ga0181356_10170745	3300017761	Freshwater Lake	MAIEKGLYQAPLGIEALAVEEEPIEIEIVDPEEINI
Ga0181343_11233631	3300017766	Freshwater Lake	MATNIDKALFQSPVGIADDAEGIEPIEIEIVDPEAVHIE
Ga0181357_10201701	3300017777	Freshwater Lake	VATNMDKALTQAPAGLEALAQDESAIEIEIVDPEAVHIGIG
Ga0181357_10354111	3300017777	Freshwater Lake	MATNIDKALYQQPMGIDALGEQESPLEIEIVDPEEVTILFFP
Ga0181357_12077351	3300017777	Freshwater Lake	MATNIDKALYQAPMGLDDMGEEAIEIEIVDPESVKIGIG
Ga0181357_12930511	3300017777	Freshwater Lake	MDKALTQAPAGLEALAQDESAIEIEIVDPEAVHIGIG
Ga0181346_11389442	3300017780	Freshwater Lake	MATNIDKALYQQPMEEDAAEAIEIEIIDPEEVNIGIGDLEIS
Ga0181348_12516082	3300017784	Freshwater Lake	MATNVDKALFQPPMGLEAIEEEAIEIEIIDPEEVNIRAGDLEISIGKGED
Ga0181355_11397303	3300017785	Freshwater Lake	MSVDKTLYQAPVGIEEAAVGPEIEIEIVDPEEVNI
Ga0181359_10672292	3300019784	Freshwater Lake	MATNVDKALYQQPRGIDALAQDESPLEIEIIDPEEV
Ga0181359_12686442	3300019784	Freshwater Lake	MATNIDKSLYQAPMGLDDMGDEAIEIEIVDPESVKIGI
Ga0207193_18663561	3300020048	Freshwater Lake Sediment	MATNIDKALYQQPLGIEELAQEEAPLEIEIVDPEEV
Ga0211734_112068062	3300020159	Freshwater	MATNIDKALYQNPVGIEDAALNEEAVEIEIIDPEQVNIHADGLDISI
Ga0211733_102561572	3300020160	Freshwater	MATNIDKSLFQQPTGIDALGEMEEPIEIEIVDPEAVRIDMGDLEIELMKAEP
Ga0211726_109949331	3300020161	Freshwater	MATNIDKALYQQPTGIDALAQDEEAIEIEIVDPEEVNI
Ga0211729_104899601	3300020172	Freshwater	MATNIDKALFQSPQGLESESDGMEGIEIEIIDPEEVNISAGDLDISIKP
Ga0214255_10372271	3300020712	Freshwater	MAIDKALYQAPEGIDALAAKEQPLEIEVVNPDEITIGMDGLEITLT
Ga0214172_10438053	3300020733	Freshwater	MEKSVYQAPQGITGASQEPIEIEIVDPEEVNIHAGGLDI
Ga0194048_102343081	3300021519	Anoxic Zone Freshwater	MATNIDKALYQNPQGIDALAQDEEPIEIEIVDPEAV
Ga0222714_101677762	3300021961	Estuarine Water	MATNIDKALYQQPVGIDALGEQESPLEIEIVDPEE
Ga0222714_103239882	3300021961	Estuarine Water	MATNIDKALFQQPTGIEALGEAEEPIEIEIVDPESVSIR
Ga0222714_104275001	3300021961	Estuarine Water	LKEHMATNIDKSLYQAPMGLDDMGDEAIEIEIVDPESMKIG
Ga0222713_101167603	3300021962	Estuarine Water	MATNIDKALYQQPQGIADAAENEEPIEIEIIDPEEVNIHAGDLELSI
Ga0181354_10128781	3300022190	Freshwater Lake	MANIDKGLYQAPMGLEAMGMSEEPIEIEIIDPEAVNIRTGD
Ga0181354_10785132	3300022190	Freshwater Lake	MATNIDKALYQAPSSMEEDALDEEPIEIEIIDPEAVNIHADG
Ga0181354_11590291	3300022190	Freshwater Lake	MATNIDKALFQQPQGIDELAEDEQGIEIEIVDPESVSIEGPSSL
Ga0181354_12499532	3300022190	Freshwater Lake	MATNIDKALYQAPVGMMGSQEPDIEIEIEDPESVKIG
Ga0181351_11158702	3300022407	Freshwater Lake	MATNIDKALYQAPMGLDDMGEEAIEIEIVDPESVKIGI
Ga0181351_12058352	3300022407	Freshwater Lake	MATNFMDKGLYQAPQGLEQEEAEPIEIEIVDPEEVSIHAGG
Ga0228703_10207933	3300022747	Freshwater	MAIDKSLYQAPAGIDALAQEEEPIEIEIVDPEEVNIHAGDVD
Ga0255168_10671332	3300024506	Freshwater	MATNIQKSLYEAPVGIEAAAEEIEPIEIEIVDPEEVNIDMG
Ga0209697_105683532	3300025316	Freshwater Lake Hypolimnion	MATNIDKALYSDTQGIASAHADEPIEIEVVDPEAVNIHAGDLDIEI
Ga0208738_10331931	3300025379	Freshwater	MAMDKGLYQAPQGIAGSPNEPPLEIEIVDPEAIHIG
Ga0208871_10276152	3300025381	Freshwater	MTIAKSLYQAPQGLDSLDHEAVEIEIVDPEEVNIHAGGVDIHIGKEED
Ga0208256_10283832	3300025382	Freshwater	MATNIDKALYQAPMGMGMDDGNPIEVEIEDPESVH
Ga0208251_10233112	3300025398	Freshwater	MAIDKALYQAPEGIDALAEKEQPLEIEVVNPEEVTIGMDGLEI
Ga0208745_10073582	3300025403	Freshwater	MAIDKALYQAPEGIDALAAKEQPLEIEVVNPDEMTIGMDGLEITLT
Ga0208424_10076313	3300025445	Aqueous	MATNIDKALFQAPQGLESEAEGAEPIEIEIVDPEEVNISAGDLE
Ga0208497_10181781	3300025466	Freshwater	MAIDKALYQAPEGIDALAEKEVPIEIEIVSIEEGG
Ga0208105_10703152	3300025487	Freshwater	MAIDKALYQAPEGIDALAEKEQPLEIEVVDPKEVTIGM
Ga0207954_10977372	3300025606	Freshwater	MATNIDKALYQQPQGIEDLAQDQPEDFEIEIIDPEAVNIH
Ga0208428_11320952	3300025653	Aqueous	MATNIDKGLYQAPAGLESAATDVEPIEIEIEDPES
Ga0208386_10403611	3300025781	Freshwater	MATNIDKALYSDNQGIAAAHSDEPIEIEVIDPEAVKIHAGDLD
Ga0208544_100178495	3300025887	Aqueous	MATNMDKALRGHQTGIDALAQNEEPIEIEIIDPEEVNIDGPG
Ga0208923_10964381	3300027320	Estuarine	MATNFDKALYEQPRSMDDLAQDEEAIEIEIIDPEAVNISIGDLEISM
Ga0255075_10406512	3300027578	Freshwater	MATNIDKALYQAPMGLDDMGDEGIEIEIVDPEEVEI
Ga0208966_10963081	3300027586	Freshwater Lentic	MATNIDKALYQQPQGIDELGEQEEPLEIEIIDPEEVNIEGPGFAMS
Ga0209188_11967492	3300027708	Freshwater Lake	MATSNFDKAIYQAPQGIDALAQEEEPLEIEIVDPEEVNIHAGD
Ga0209297_13685201	3300027733	Freshwater Lake	MATNVDKALYQQPAGIDALAEDESPLEIEIVDPEEVN
Ga0209087_12175031	3300027734	Freshwater Lake	MATNIDKALYQQPMGIDALGEQESPLEIEIVDPEE
Ga0209087_12908362	3300027734	Freshwater Lake	MATNIDKALYQQPQGIESLAQDEEPIEIEIIDPEAVNIDMGD
Ga0209084_13338742	3300027749	Freshwater Lake	MATNIDKALFQQPQGMESMAQDEEPIEIEIVDPEAVN
Ga0209288_103022091	3300027762	Freshwater Sediment	MATNIDKALFQQPTGIAAAAEAEEPIEIEIVDPEAVRIDMGDLEIEMLKAE
Ga0209829_103880142	3300027777	Freshwater Lake	MATSNFDKAIYQAPQGIDALAQDEAPLEIEIVDPEEVSIK
Ga0209246_101099111	3300027785	Freshwater Lake	MATNIDKALYQQPMGIDALGEQESPLEIEIVDPEEVTIG
Ga0209972_103641931	3300027793	Freshwater Lake	MATNIDKALYQQPMGIDAAAIKEEPIEIEIIDPEAVNIDMG
Ga0209777_105286871	3300027896	Freshwater Lake Sediment	MAIDKALYQAPEGIEALAEKESPLEIEIVDPEEVNI
Ga0209777_109105612	3300027896	Freshwater Lake Sediment	MATNIDKALYQQPQGIDDLARGEPSMEIEIVDPEEVS
Ga0209702_101294232	3300027976	Freshwater	MATNIDRVLNQQPTGIEELAQNEEPIEIEIVDPEAV
Ga0315907_101239341	3300031758	Freshwater	MATNIDKALYQQPTGIAAAAEAEEPIEIEIVDPESVTIGMGDLEIELTPGE
Ga0315900_103380051	3300031787	Freshwater	MATNIDKALFQAPQGLESEAEGAEPIEIEIIDPEEVNIQ
Ga0315904_101295291	3300031951	Freshwater	MATNIDKALFQAPQGLESEAEGAEPIEIEIIDPEEVNI
Ga0315294_106549691	3300031952	Sediment	MAIEKGLYQAPEGIEALAENETPMEIEIVNPEEVTI
Ga0315901_102725081	3300031963	Freshwater	MATNIDKALFQQPMGIDAAGDMEETIEIEIVDPEEVSIRAG
Ga0315274_102300573	3300031999	Sediment	MATNIDKALFQQPMGIAAAAEELDPIEIEIVDPEEVSIKVGDMEIE
Ga0315903_104364061	3300032116	Freshwater	MATNIDKALFQQPRGIDALAEDEQGIEIEIVDPES
Ga0315903_105752661	3300032116	Freshwater	MATNIDKALYQQPAGIDALAQDEDAIEIEIVDPEEVNIRAGD
Ga0315903_108164131	3300032116	Freshwater	MATNIDKALYQAPSSMEEDALDEEPIEIEIIDPEAVNI
Ga0315903_109211662	3300032116	Freshwater	MATNIDKALYPAPTGIEELAQAEPEIEIEIIDPEE
Ga0316218_12024492	3300032117	Freshwater	MAIDKGLYQAPQGIEDLAQNEEPIEIEIIDPEEVDIHA
Ga0315295_112720331	3300032156	Sediment	MATNVDKALYQAPEGIDDAAADESAIEIEVVDPEAIKIG
Ga0315268_104437472	3300032173	Sediment	MATNIDKALYQQPLGIDALGEQESPLEIEIVDPEE
Ga0315268_115619382	3300032173	Sediment	MATNIDKALYQQPQGIDELGEQEEAVEIEIIDPEEVNI
Ga0315276_123496042	3300032177	Sediment	MATNVDKALYQQPRGIDALAQDEEALEIEIIDPEEVN
Ga0315271_117966693	3300032256	Sediment	MATNIDKSLYQAPMGLDDMGEEAIEIEIVDPESVKI
Ga0316226_13235972	3300032562	Freshwater	MATNIDKALYADTQGIAGAQDEEPLEIEIIDPEAV
Ga0316228_11681391	3300032579	Freshwater	MATNIDKALYSDNQGIAAAHSDEPIEIEVIDPEAV
Ga0316232_13052622	3300032605	Freshwater	MAIDKGLYQAPQGIEDLAQNEEPIEIEIIDPEEVDIHAGDTDISIKPG
Ga0334992_0476936_420_542	3300033992	Freshwater	MATNIDKALYQQPQGIDELGEQEEAVEIEIIDPEEVNIEGP
Ga0334987_0261445_1050_1172	3300034061	Freshwater	MATNIDKALYQQPQGIDALGEAEPELEIEIIDPEEVSIKGP
Ga0334995_0090879_2231_2341	3300034062	Freshwater	MATNIDKALYQQPMGIDALGEQESPLEIEIVDPEEVT
Ga0335010_0436368_3_131	3300034092	Freshwater	MATNIDKALFQQPTGIAAAAEELDPIEIEIVDPEAVRIDMGDM
Ga0335012_0575044_3_107	3300034093	Freshwater	MATNIDKSLSQAPTGLEAMLGEPDIEIEIEDPESV
Ga0335031_0386572_746_883	3300034104	Freshwater	MATNIDKALYQAPASIEELAQDEEPIEIEIIDPEQVNIHAGGLDLS
Ga0335036_0413689_744_863	3300034106	Freshwater	MATNIDKALYQQPMGIDALGEQESPLEIEIVDPEEVTIGM
Ga0335056_0248269_902_1006	3300034120	Freshwater	MATNIDKALYQQPTGIDALAQNEDAIEIEIVDPEE
Ga0335061_0530521_480_596	3300034168	Freshwater	MATNIDKALYQQPQGIDALGGEEQGIEIEIVDPEEVSIR
Ga0335065_0329132_826_957	3300034200	Freshwater	MATNIDKALYQQPTGIDALAQNEDAIEIEIVDPEEVNIKAGDLE
Ga0335065_0446053_644_784	3300034200	Freshwater	MATNIDKALYQNPVGIDDAALNEEAIEIEIIDPEQVNIHAGDLDISI
Ga0335049_0438532_727_846	3300034272	Freshwater	MATNIDKALYQSPTGIEELAEDESPIEIEIVDPEMVKIGI
Ga0335048_0092156_1733_1837	3300034356	Freshwater	MATNIDKALYQSPMGLEAAEEEAIEIEIIDPEEVN

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F043280

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences