Metagenome Family F043224

Basic Information
Family ID	F043224
Family Type	Metagenome
Number of Sequences	156
Average Sequence Length	96 residues
Representative Sequence	QMALLLGTMPQDSVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVKTGVSAGQLRAAASASQGVASGALLQIPSPMTMSSEDEE
Number of Associated Samples	60
Number of Associated Scaffolds	156

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	8.39 %
% of genes near scaffold ends (potentially truncated)	84.62 %
% of genes from short scaffolds (< 2000 bps)	91.03 %
Associated GOLD sequencing projects	58
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (97.436 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater (38.462 % of family members)
Environment Ontology (ENVO)	Unclassified (50.641 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (63.462 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 61.36% β-sheet: 0.00% Coil/Unstructured: 38.64%
Feature Viewer

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Pfam ID	Name	% Frequency in 156 Family Scaffolds
PF01702	TGT	1.92
PF00078	RVT_1	0.64
PF06991	MFAP1	0.64
PF00125	Histone	0.64

COG ID	Name	Functional Category	% Frequency in 156 Family Scaffolds
COG0343	Queuine/archaeosine tRNA-ribosyltransferase	Translation, ribosomal structure and biogenesis [J]	1.92
COG1549	Archaeosine tRNA-ribosyltransferase, contains uracil-DNA-glycosylase and PUA domains	Translation, ribosomal structure and biogenesis [J]	1.92

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.44 %
All Organisms	root	All Organisms	2.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.44 %
cellular organisms	root	All Organisms → cellular organisms	2.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.44 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	2.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.44 %
Cryptophyceae	class	All Organisms → cellular organisms → Eukaryota → Cryptophyceae	0.64 %

Scaffold	Taxonomy	Length	IMG/M Link
3300000756\|JGI12421J11937_10079541	Not Available	953	Open in IMG/M
3300002447\|JGI24768J34885_10127130	Not Available	859	Open in IMG/M
3300002447\|JGI24768J34885_10211235	Not Available	654	Open in IMG/M
3300002447\|JGI24768J34885_10213171	Not Available	650	Open in IMG/M
3300004240\|Ga0007787_10716189	Not Available	500	Open in IMG/M
3300005517\|Ga0070374_10287876	Not Available	835	Open in IMG/M
3300005525\|Ga0068877_10537020	Not Available	642	Open in IMG/M
3300005527\|Ga0068876_10692088	Not Available	545	Open in IMG/M
3300005662\|Ga0078894_10752222	Not Available	856	Open in IMG/M
3300005662\|Ga0078894_11572368	Not Available	543	Open in IMG/M
3300005662\|Ga0078894_11789142	Not Available	501	Open in IMG/M
3300006018\|Ga0068875_1024949	Not Available	540	Open in IMG/M
3300007547\|Ga0102875_1285842	Not Available	501	Open in IMG/M
3300007548\|Ga0102877_1242920	Not Available	507	Open in IMG/M
3300007600\|Ga0102920_1080555	Not Available	1030	Open in IMG/M
3300008108\|Ga0114341_10300304	Not Available	835	Open in IMG/M
3300008114\|Ga0114347_1056162	Not Available	1657	Open in IMG/M
3300008119\|Ga0114354_1048852	Not Available	3308	Open in IMG/M
3300008119\|Ga0114354_1167802	Not Available	798	Open in IMG/M
3300008119\|Ga0114354_1205283	Not Available	679	Open in IMG/M
3300008119\|Ga0114354_1282795	Not Available	512	Open in IMG/M
3300008120\|Ga0114355_1165911	Not Available	762	Open in IMG/M
3300008259\|Ga0114841_1009610	All Organisms → cellular organisms → Eukaryota	5185	Open in IMG/M
3300008259\|Ga0114841_1017893	Not Available	3726	Open in IMG/M
3300008259\|Ga0114841_1038252	Not Available	6117	Open in IMG/M
3300008259\|Ga0114841_1051163	Not Available	2008	Open in IMG/M
3300008259\|Ga0114841_1096441	Not Available	1296	Open in IMG/M
3300008259\|Ga0114841_1097403	Not Available	1287	Open in IMG/M
3300008259\|Ga0114841_1110572	Not Available	1171	Open in IMG/M
3300008259\|Ga0114841_1113288	Not Available	1151	Open in IMG/M
3300008259\|Ga0114841_1169247	Not Available	837	Open in IMG/M
3300008259\|Ga0114841_1174041	Not Available	817	Open in IMG/M
3300008259\|Ga0114841_1209414	Not Available	692	Open in IMG/M
3300008259\|Ga0114841_1237524	Not Available	611	Open in IMG/M
3300008259\|Ga0114841_1258280	Not Available	559	Open in IMG/M
3300008261\|Ga0114336_1234707	Not Available	744	Open in IMG/M
3300008262\|Ga0114337_1049405	Not Available	3809	Open in IMG/M
3300009056\|Ga0102860_1110412	Not Available	766	Open in IMG/M
3300013004\|Ga0164293_10987201	Not Available	526	Open in IMG/M
(restricted) 3300014720\|Ga0172376_10586848	Not Available	613	Open in IMG/M
3300020160\|Ga0211733_10631555	Not Available	690	Open in IMG/M
3300020205\|Ga0211731_11368560	Not Available	589	Open in IMG/M
3300024343\|Ga0244777_10588141	Not Available	676	Open in IMG/M
3300027145\|Ga0255114_1076330	Not Available	576	Open in IMG/M
3300027593\|Ga0255118_1015499	Not Available	1464	Open in IMG/M
3300027679\|Ga0209769_1089468	Not Available	1003	Open in IMG/M
3300027679\|Ga0209769_1226878	Not Available	573	Open in IMG/M
3300027679\|Ga0209769_1253057	Not Available	535	Open in IMG/M
3300027707\|Ga0209443_1084353	Not Available	1227	Open in IMG/M
3300027707\|Ga0209443_1201695	Not Available	699	Open in IMG/M
3300027756\|Ga0209444_10242435	Not Available	632	Open in IMG/M
3300027816\|Ga0209990_10090332	Not Available	1496	Open in IMG/M
3300027836\|Ga0209230_10208687	Not Available	1123	Open in IMG/M
3300027836\|Ga0209230_10288752	Not Available	945	Open in IMG/M
3300027836\|Ga0209230_10312114	Not Available	906	Open in IMG/M
3300027836\|Ga0209230_10529138	Not Available	666	Open in IMG/M
3300027836\|Ga0209230_10685114	Not Available	566	Open in IMG/M
3300031758\|Ga0315907_10565149	Not Available	888	Open in IMG/M
3300031758\|Ga0315907_10655636	Not Available	805	Open in IMG/M
3300031758\|Ga0315907_10662128	Not Available	800	Open in IMG/M
3300031758\|Ga0315907_10662167	Not Available	800	Open in IMG/M
3300031758\|Ga0315907_10742049	Not Available	741	Open in IMG/M
3300031758\|Ga0315907_10798280	Not Available	705	Open in IMG/M
3300031758\|Ga0315907_10880282	Not Available	659	Open in IMG/M
3300031758\|Ga0315907_10895279	Not Available	652	Open in IMG/M
3300031758\|Ga0315907_11098691	Not Available	565	Open in IMG/M
3300031758\|Ga0315907_11129972	Not Available	554	Open in IMG/M
3300031758\|Ga0315907_11171802	Not Available	540	Open in IMG/M
3300031784\|Ga0315899_10008961	All Organisms → cellular organisms → Eukaryota	10729	Open in IMG/M
3300031784\|Ga0315899_10169428	Not Available	2218	Open in IMG/M
3300031784\|Ga0315899_10250586	Not Available	1766	Open in IMG/M
3300031784\|Ga0315899_10287378	Not Available	1630	Open in IMG/M
3300031784\|Ga0315899_10496044	Not Available	1171	Open in IMG/M
3300031784\|Ga0315899_10505754	Not Available	1156	Open in IMG/M
3300031784\|Ga0315899_10529743	Not Available	1123	Open in IMG/M
3300031784\|Ga0315899_10602095	Not Available	1036	Open in IMG/M
3300031784\|Ga0315899_10738370	Not Available	909	Open in IMG/M
3300031784\|Ga0315899_10747134	Not Available	902	Open in IMG/M
3300031784\|Ga0315899_11140664	Not Available	680	Open in IMG/M
3300031784\|Ga0315899_11253229	Not Available	638	Open in IMG/M
3300031784\|Ga0315899_11578218	Not Available	545	Open in IMG/M
3300031784\|Ga0315899_11780750	Not Available	502	Open in IMG/M
3300031786\|Ga0315908_10506607	Not Available	1007	Open in IMG/M
3300031786\|Ga0315908_10626588	Not Available	891	Open in IMG/M
3300031786\|Ga0315908_10914066	Not Available	711	Open in IMG/M
3300031786\|Ga0315908_10921380	Not Available	707	Open in IMG/M
3300031786\|Ga0315908_10937451	Not Available	700	Open in IMG/M
3300031786\|Ga0315908_10956243	Not Available	692	Open in IMG/M
3300031786\|Ga0315908_11257044	Not Available	585	Open in IMG/M
3300031787\|Ga0315900_10156055	Not Available	2101	Open in IMG/M
3300031787\|Ga0315900_10399238	Not Available	1086	Open in IMG/M
3300031787\|Ga0315900_10846558	Not Available	623	Open in IMG/M
3300031787\|Ga0315900_10961239	Not Available	566	Open in IMG/M
3300031857\|Ga0315909_10407106	Not Available	972	Open in IMG/M
3300031857\|Ga0315909_10835664	Not Available	577	Open in IMG/M
3300031951\|Ga0315904_11178112	Not Available	590	Open in IMG/M
3300031951\|Ga0315904_11265465	Not Available	561	Open in IMG/M
3300032050\|Ga0315906_10145319	Not Available	2298	Open in IMG/M
3300032050\|Ga0315906_10650251	Not Available	857	Open in IMG/M
3300032050\|Ga0315906_10720966	Not Available	797	Open in IMG/M
3300032050\|Ga0315906_10973941	Not Available	641	Open in IMG/M
3300032050\|Ga0315906_11227151	Not Available	541	Open in IMG/M
3300032092\|Ga0315905_10014548	All Organisms → cellular organisms → Eukaryota → Cryptophyceae	7957	Open in IMG/M
3300032092\|Ga0315905_10030425	Not Available	5477	Open in IMG/M
3300032092\|Ga0315905_10046830	All Organisms → cellular organisms → Eukaryota	4390	Open in IMG/M
3300032092\|Ga0315905_10637268	Not Available	956	Open in IMG/M
3300032092\|Ga0315905_10715664	Not Available	885	Open in IMG/M
3300032092\|Ga0315905_10765877	Not Available	845	Open in IMG/M
3300032092\|Ga0315905_10949076	Not Available	729	Open in IMG/M
3300032092\|Ga0315905_11079144	Not Available	667	Open in IMG/M
3300032092\|Ga0315905_11168683	Not Available	631	Open in IMG/M
3300032092\|Ga0315905_11251426	Not Available	601	Open in IMG/M
3300032092\|Ga0315905_11440403	Not Available	544	Open in IMG/M
3300032092\|Ga0315905_11440695	Not Available	544	Open in IMG/M
3300032092\|Ga0315905_11491321	Not Available	531	Open in IMG/M
3300032092\|Ga0315905_11591709	Not Available	507	Open in IMG/M
3300033980\|Ga0334981_0102298	Not Available	1418	Open in IMG/M
3300033984\|Ga0334989_0431118	Not Available	671	Open in IMG/M
3300034023\|Ga0335021_0457632	Not Available	656	Open in IMG/M
3300034050\|Ga0335023_0337755	Not Available	809	Open in IMG/M
3300034063\|Ga0335000_0453819	Not Available	750	Open in IMG/M
3300034064\|Ga0335001_0118131	Not Available	1512	Open in IMG/M
3300034066\|Ga0335019_0291245	Not Available	1027	Open in IMG/M
3300034066\|Ga0335019_0671276	Not Available	598	Open in IMG/M
3300034068\|Ga0334990_0246020	Not Available	975	Open in IMG/M
3300034094\|Ga0335014_0341493	Not Available	666	Open in IMG/M
3300034095\|Ga0335022_0311259	Not Available	887	Open in IMG/M
3300034095\|Ga0335022_0338753	Not Available	836	Open in IMG/M
3300034095\|Ga0335022_0345593	Not Available	824	Open in IMG/M
3300034095\|Ga0335022_0395850	Not Available	748	Open in IMG/M
3300034095\|Ga0335022_0405893	Not Available	735	Open in IMG/M
3300034095\|Ga0335022_0498423	Not Available	635	Open in IMG/M
3300034095\|Ga0335022_0580964	Not Available	569	Open in IMG/M
3300034095\|Ga0335022_0653976	Not Available	523	Open in IMG/M
3300034101\|Ga0335027_0558725	Not Available	705	Open in IMG/M
3300034105\|Ga0335035_0545697	Not Available	625	Open in IMG/M
3300034107\|Ga0335037_0484142	Not Available	662	Open in IMG/M
3300034109\|Ga0335051_0090942	Not Available	1594	Open in IMG/M
3300034116\|Ga0335068_0100950	Not Available	1617	Open in IMG/M
3300034121\|Ga0335058_0616689	Not Available	605	Open in IMG/M
3300034122\|Ga0335060_0307126	Not Available	866	Open in IMG/M
3300034122\|Ga0335060_0611511	Not Available	547	Open in IMG/M
3300034166\|Ga0335016_0312883	Not Available	955	Open in IMG/M
3300034167\|Ga0335017_0229020	Not Available	1057	Open in IMG/M
3300034167\|Ga0335017_0287401	Not Available	920	Open in IMG/M
3300034167\|Ga0335017_0366538	Not Available	788	Open in IMG/M
3300034167\|Ga0335017_0707820	Not Available	511	Open in IMG/M
3300034200\|Ga0335065_0802204	Not Available	527	Open in IMG/M
3300034357\|Ga0335064_0210338	Not Available	1228	Open in IMG/M
3300034357\|Ga0335064_0364921	Not Available	922	Open in IMG/M
3300034357\|Ga0335064_0494377	Not Available	776	Open in IMG/M
3300034357\|Ga0335064_0514260	Not Available	758	Open in IMG/M
3300034357\|Ga0335064_0616857	Not Available	679	Open in IMG/M
3300034357\|Ga0335064_0856121	Not Available	551	Open in IMG/M
3300034357\|Ga0335064_0975982	Not Available	505	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	96.79%
Marine	Environmental → Aquatic → Marine	3.21%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	41.67%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	38.46%
Lentic	Environmental → Aquatic → Freshwater → Lentic	15.38%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	3.21%
River	Environmental → Aquatic → Freshwater → River	1.28%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	41.67%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	38.46%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	14.74%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	3.21%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	1.28%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.64%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	38.46%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	26.28%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	14.10%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	9.62%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	5.13%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	3.21%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.28%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	1.28%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	0.64%

Visualization

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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000756	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011	Environmental	Open in IMG/M
3300002447	Freshwater and sediment microbial communities from Lake Ontario - Sta 18 epilimnion Metagenome	Environmental	Open in IMG/M
3300004240	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN	Environmental	Open in IMG/M
3300005517	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 4)	Environmental	Open in IMG/M
3300005525	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel6S_1000h metaG	Environmental	Open in IMG/M
3300005527	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300006018	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel4S_1600h metaG	Environmental	Open in IMG/M
3300007547	Estuarine microbial communities from the Columbia River estuary - metaG 1547B-02	Environmental	Open in IMG/M
3300007548	Estuarine microbial communities from the Columbia River estuary - metaG 1548B-3	Environmental	Open in IMG/M
3300007600	Estuarine microbial communities from the Columbia River estuary - metaG 1568A-3	Environmental	Open in IMG/M
3300008108	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-C-NA	Environmental	Open in IMG/M
3300008114	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-C-NA	Environmental	Open in IMG/M
3300008119	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0110-C-NA	Environmental	Open in IMG/M
3300008120	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-3-NA	Environmental	Open in IMG/M
3300008259	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0132-C-NA	Environmental	Open in IMG/M
3300008261	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-C-NA	Environmental	Open in IMG/M
3300008262	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-C-NA	Environmental	Open in IMG/M
3300009056	Estuarine microbial communities from the Columbia River estuary - metaG 1449A-3	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300014720 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_35m	Environmental	Open in IMG/M
3300020160	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_105 megahit1	Environmental	Open in IMG/M
3300020205	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_103 megahit1	Environmental	Open in IMG/M
3300024343	Combined assembly of estuarine microbial communities from Columbia River, Washington, USA >3um size fraction	Environmental	Open in IMG/M
3300027145	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Law_RepA_8h	Environmental	Open in IMG/M
3300027593	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Atlam_RepB_8h	Environmental	Open in IMG/M
3300027679	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.DN (SPAdes)	Environmental	Open in IMG/M
3300027707	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DCMD (SPAdes)	Environmental	Open in IMG/M
3300027756	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.DN (SPAdes)	Environmental	Open in IMG/M
3300027816	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG (SPAdes)	Environmental	Open in IMG/M
3300027836	Freshwater and sediment microbial communities from Lake Ontario - Sta 18 epilimnion Metagenome (SPAdes)	Environmental	Open in IMG/M
3300031758	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123	Environmental	Open in IMG/M
3300031784	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA112	Environmental	Open in IMG/M
3300031786	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA124	Environmental	Open in IMG/M
3300031787	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300031951	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120	Environmental	Open in IMG/M
3300032050	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122	Environmental	Open in IMG/M
3300032092	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121	Environmental	Open in IMG/M
3300033980	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME09Aug2015-rr0007	Environmental	Open in IMG/M
3300033984	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13Mar2001-rr0030	Environmental	Open in IMG/M
3300034023	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME21Oct2016-rr0090	Environmental	Open in IMG/M
3300034050	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07May2013-rr0095	Environmental	Open in IMG/M
3300034063	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Oct2008D10-rr0053	Environmental	Open in IMG/M
3300034064	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME14Nov2013-rr0054	Environmental	Open in IMG/M
3300034066	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Jul2017-rr0087	Environmental	Open in IMG/M
3300034068	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13Apr2016-rr0031	Environmental	Open in IMG/M
3300034094	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Sep2000-rr0077	Environmental	Open in IMG/M
3300034095	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Feb2014D0-rr0091	Environmental	Open in IMG/M
3300034101	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19Sep2005-rr0107	Environmental	Open in IMG/M
3300034105	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME15May2014-rr0127	Environmental	Open in IMG/M
3300034107	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME21Apr2017-rr0133	Environmental	Open in IMG/M
3300034109	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME26Aug2009-rr0158	Environmental	Open in IMG/M
3300034116	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-CONTROL-GENDONOR	Environmental	Open in IMG/M
3300034121	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19May2015-rr0174	Environmental	Open in IMG/M
3300034122	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Aug2014-rr0181	Environmental	Open in IMG/M
3300034166	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13Sep2012-rr0079	Environmental	Open in IMG/M
3300034167	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Apr2015-rr0082	Environmental	Open in IMG/M
3300034200	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jul2013-rr0190	Environmental	Open in IMG/M
3300034357	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME12May2017-rr0187	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12421J11937_100795412	3300000756	Freshwater And Sediment	HPLISELCTRFPWDDFTQHQQMALLLGTMSQDPVDQRHKQWFRTMLPLCHALAARITLTVQKELQMLAVQTGMSAGQLRAAASASQGVASGALIQIPSPMTMSSEDEE*
JGI24768J34885_101271301	3300002447	Freshwater And Sediment	MPQAPVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVQAGVSAGQLRAAASASNGVASGALS*
JGI24768J34885_102112352	3300002447	Freshwater And Sediment	GTMPQAPVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVQAGVSAGQLRAAASASHGVASGALS*
JGI24768J34885_102131711	3300002447	Freshwater And Sediment	VLSAQRHKQWFRTILPQCHALAARITLTVQKELQMLAVQTGVSAGQLRAAASASQVVASGTLIQIQSPMTMSSEDEE*
Ga0007787_107161891	3300004240	Freshwater Lake	MALLLGTMPQAPVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVRAGVSAGQLRAAASASNGVASGALS*
Ga0070374_102878761	3300005517	Freshwater Lake	LGSEAHLYLSCPVTSSLAHPLISELRGHFPWDGFTQHQQMALLLGTMPQAPVDQSHKQWFRTMLPQCHALAARITLTVQKELQMLAVKAGVSAGQLRAAVCASQRVASGALLQIPSPMTMSSEDDE*
Ga0068877_105370202	3300005525	Freshwater Lake	SVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVKTGVSAGQLRAAASASQGVASGALLQIPSPMTMSSEDEE*
Ga0068876_106920881	3300005527	Freshwater Lake	WDGFTQQQQMALLLGTMPQDPVDQRHKQWFRTILPQCHALAARITLTVQKELQMLAVQTGGSAGQLRAAAIAPQVVAGGALIQVPSPMTMSSEDEE*
Ga0078894_107522221	3300005662	Freshwater Lake	LLGTMPQDSVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVKTGVSAGQLRAAASASQGVASGALLQIPSPMTMSSEDEE*
Ga0078894_115723682	3300005662	Freshwater Lake	TQHQQMALLLGTMPQAPVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVRAGVSAGQLRAAASASNGVASGALS*
Ga0078894_117891421	3300005662	Freshwater Lake	QQMALLLGTMPQDPVDQRHKQWFRTMLPQCHALAARITLTVQKELQKLAVHTGVSAGQLRAAASASQGVAGGALIQIPSPMTMSSEDEE*
Ga0068875_10249491	3300006018	Freshwater Lake	ALLLRTMPQDPVAQRHKQWFRTILPQCHALAARITLTVQKELQRLAVQTGMSAGQLLTTDSVSQVAVIGVLIQTLSLMTMCLNSAILRA*
Ga0102875_12858422	3300007547	Estuarine	QMALLLGTMPQDSVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVKTGVSAGQLRAAASASQGVASGALLQIPSPMTMSSEDEE*
Ga0102877_12429201	3300007548	Estuarine	SELRVRFPWDGFTQQQQMALLLGTMPQDPVDQRHKQWFRTMLPQCHALASRITLTVQKELQMLAVQTGMSAGQLRAAASASKVTVSGVLMRSVLDDYEL*
Ga0102920_10805551	3300007600	Estuarine	LGSEAHLYLSCPVTSPLAHPLISEFRDRFPWDGFTQHQQMALLLGTMPQDSVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVKTGVSAGQLRAAASASQGVASGALLQIPSPMTMSSEYEE*
Ga0114341_103003041	3300008108	Freshwater, Plankton	SSLAHPLISELRGHFPWDGFTQHQQMALLLGTMPQAPVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVKTGVSAGQLRAAAYASHGVASGALLQIPSPMTMSSEDDE*
Ga0114347_10561621	3300008114	Freshwater, Plankton	FTQHQQMALLLGTMPQDPVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVQTGVSAGQLRAAASATQVVAGGALIQIPKFRPL*
Ga0114354_10488522	3300008119	Freshwater, Plankton	MSQDSVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVKTGVSAGQLRAAASASQGVASGALLQIPSPMTMSSEDEE*
Ga0114354_11678021	3300008119	Freshwater, Plankton	LAHPLISELRSHFPWDGFTQHQQMALLLGTMPQAPVDQRHKQWFMTMLPQCHALAARITLTVQKELQMLAVRAGVSAGQLRAAASVSNGVASGALS*
Ga0114354_12052831	3300008119	Freshwater, Plankton	MALLLGTMPQDPVDQRHKQWFRTMLPLCHALAARITLTVQKELQMLAVQTGMSAGQLRAAASASQGVASGALIQIPSPMTMSSEDEE*
Ga0114354_12827951	3300008119	Freshwater, Plankton	LRGHFPWDGFTQHQQMALLLGTMPQAPVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVKTGVSAGQLRAAACASHGVASGALLQIPSPMTMSSEDDE*
Ga0114355_11659111	3300008120	Freshwater, Plankton	LLAHPLISELRGHFPWDGFTQHQQMALLLGTMPQAPVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVKAGVSAGQLRAAVCASQRIASGALLQIPSPMTMSSEDDE*
Ga0114841_10096101	3300008259	Freshwater, Plankton	MALLLGTMPQDSVDQRHKQWFRTILPQCHALAARITLTVQKELQMLMLAVQTGVSAGQLRAAASASQGVASGALLQIPSPMTMGS
Ga0114841_10178931	3300008259	Freshwater, Plankton	MFFSRISGGHFQWDDFTQHQQMSLLLGTMPQAPVDQHHKQWFRTMLPQCHALAARITLTVQKELQMLAVQAGVSAGQLRAAASASNGVASGALS*
Ga0114841_10382521	3300008259	Freshwater, Plankton	MALLLGTMPHDPVAQRHKQWFRTILPQCHALAARITLTVQKELQMLAVQTGVSAGQLRAAASASQVATGGALIQAPSPTTMSSEDEE*
Ga0114841_10511633	3300008259	Freshwater, Plankton	EAHLYLSCTVTSPLAHPLISELRVRFPWDGFTQQQQMALLLGTMPQDPVAQRHKQWFGTILPLCHALAARITLTVQKELQMLAVQTGVSAGQFRAAASASQVVAGGTLIQIPSPMTMSSEDEE*
Ga0114841_10964412	3300008259	Freshwater, Plankton	MALLLGTMPQDPVAQRHKQWFRTILPQCHALAARITLTVQKELQMLAVQTGVSAGQLRAAASASQVAASGALIQAPSPMTMSSEDEE*
Ga0114841_10974031	3300008259	Freshwater, Plankton	LYLSCTVTSPLDHPLISEFRVRFPWDGFTQQQQMALLLGTMSQDPIAQRHKQWFRTILPQCHAHAALITLTVQKELQRLAVQTGMSAGQLRVTASVSQVASGGVLIQAPSPMTMSSEDEE
Ga0114841_11105722	3300008259	Freshwater, Plankton	HKQWFRTILPQCHALAARITLTVQKELQMLAVQTGVSAGQLRAAASASQVAASGALIQDPSPMTMISEDEE*
Ga0114841_11132881	3300008259	Freshwater, Plankton	MALLLGTMPQDPVDQRHTQWFRTILPQCHALAARITLTVQKELQMLAVQTGVSAGQLRAAASASQGVAGGALIQIPSPMTMISEDEE*
Ga0114841_11692472	3300008259	Freshwater, Plankton	QQMALLLGTMPQAPVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVKAGVSAGQLRAAVCASQGVASGALLQIPSPMTMSSEDDE*
Ga0114841_11740412	3300008259	Freshwater, Plankton	MHSHVTTGSLFRFPWDGYTQQQQMALLLGTMPQDPVAQRQKQWFRTILPQCDALAARITLTVQKELQMLAVQAGVLAGQLRATASTSQVAASGVLIQAPSPMIMSSEDEE*
Ga0114841_12094142	3300008259	Freshwater, Plankton	YLPCAVTSPLVHPLISELRVRFPWDGYTQQQQMALLLGTLPQDPVAQRHQQWFRTILPQCHALAARITLTVQKELQMLAVQTGMSAGQLRAAASASKVTASGVLLQAPSSTTLTSEDEE*
Ga0114841_12375241	3300008259	Freshwater, Plankton	YGDRRCPLCPGRHLGSEAHLYLSCTVTSPLAHPLISELRVRFLWNGFTQQQQMALLLGTMPQDPVGQRHKQWFRTILPQCHALAARITLTVQKELQMLAVQTGVSAGQLRAAASASQVAAGGALIRTPSPMTMSSEDEE*
Ga0114841_12582801	3300008259	Freshwater, Plankton	FTQHQQMALLLGTMPQEPVDQRHKQWFRMMLPQCHALAARITLTVQKELQKLAVQAGVSAGQLRAAASASNGVASGSLI*
Ga0114336_12347071	3300008261	Freshwater, Plankton	MALLLGTMPQDSVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVKTGVSAGQLRAAASASQGVASGALLQIPSPMTMSSEDEE*
Ga0114337_10494052	3300008262	Freshwater, Plankton	MLPQCHASEFRDRFPWDGFTQHQQMALLLGTMPQDSVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVKTGVSAGQLRAAASASQGVASGALLQIPSPMTMSSEDEE*
Ga0102860_11104122	3300009056	Estuarine	GFTQHQQMAFLLGTMPQDSVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVKTGVSAGQLRAAASASQGVASGALLQIPSPMTMSSEDEE*
Ga0164293_109872011	3300013004	Freshwater	ISELCTRFPWDDFTQHQQMALLLGTMSQDPVDQRHKQWFRTMLPLCHALAARITLTVQKELQMLAVQTGMSAGQLRAAASASQGVASGALIQIPSPIIMSSEDEE*
(restricted) Ga0172376_105868481	3300014720	Freshwater	VPGRGVLVNYNDIDRARFPWDDFTQHQQMALLLGTMPQDPVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVQTGMSAGQLRAAASASQGVASGARIQTPSPMTMSSEDEE*
Ga0211733_106315551	3300020160	Freshwater	ISELRVRFLWDGFTQQQQMALLLRTMPQDPVAQRHKQWFRTILPQCHALAARITLTVQKELQMLAVQTGVSAGQLRAAASASQVAASWVLIQAPSPMTMSSEDEE
Ga0211731_113685601	3300020205	Freshwater	LLGTMPQAPVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVRAGVSAGQLRAAASASNGVASGALS
Ga0244777_105881411	3300024343	Estuarine	SVDQCHKQWFRTMLPQCHALAARITLTVQKELQMLAVKTGVSAGQLRAAASASQGVASGALIQIPSPMTMSAEDEE
Ga0255114_10763302	3300027145	Freshwater	LSCPVTSSLAHPLISELRGHFPWDGFTQHQQMALLLGTMPQAPVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVKAGVSAGQLRAAASASQGVASGALLQIPSPMTMSSEDEE
Ga0255118_10154991	3300027593	Freshwater	HQQMALLLGTMPQDSVDKRHKQWFRTILPQCHALAARITLTAQKELQMLAVKTGVSTGQLRAAVSASQGVASGALLQIPSPMTMSSEDEE
Ga0209769_10894682	3300027679	Freshwater Lake	CTVTSPLAHPLISELRVRFPWDGFTLQQQMALLLGTMPQDPVAQRHKQWFRTILPQCHALAARITLTVQKELQMLAVQTGVSAGQLRAAASATQVVAGGALIQIPKFRPL
Ga0209769_12268781	3300027679	Freshwater Lake	MAFLLGTMPQGSVDQRHKQWFRTMLSQCHALAARITLTVQKELQMLSVKTGVSTGQLRAAASAS
Ga0209769_12530571	3300027679	Freshwater Lake	SELRVRFPWDGFTQHQQMALLLGTMPQDSVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVQTGVSAGQLRAAASASQGVASGALLQIPSPMTMGSEDEE
Ga0209443_10843531	3300027707	Freshwater Lake	TMPLDAVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVKTGVSAGQLRAAASASQGVASGALLQIPSPMTMSSEDEE
Ga0209443_12016951	3300027707	Freshwater Lake	LGSEAHLYLSCPVTSLLAHPLISELRGLFPWDGFTQHQQMALLLGTMPQAPVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVKAGVSAGQLRAAACASQGVASGALLQIPSPMTMSSEDDE
Ga0209444_102424352	3300027756	Freshwater Lake	PLISELRGHFPWDGFTQHQQMALLLGTMPQAPVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVKAGVSAGQLRAAVCASQRAASGALLQIPSPMTMSSEDDE
Ga0209990_100903321	3300027816	Freshwater Lake	LSCPVTSPLAHPLISEFRSHFPWDGFTQHQQMALLLGTMPQDSVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVKTGVSAGQLRAAASASQGVASGALLQIPSPMTMSSEDEE
Ga0209230_102086871	3300027836	Freshwater And Sediment	FTQHQQMALLLGTMPQDPVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVQAGVSAGQLRAAASASQVVAGGALIQIPSPMPMSSEDEE
Ga0209230_102887521	3300027836	Freshwater And Sediment	PLCPGRHLGSETHLYLSCTVTSPLAYPLIAELRARFPWDGFTQHQQMALLLGTMPQDPVAQRHKQWFRMILPQCHALAARITLTVQKELQRLAVQTGVSAGQLRASASASQVVASGSLIQIPSPMTMSSEDEE
Ga0209230_103121141	3300027836	Freshwater And Sediment	MALLLGTMPQDPVAQRHKQWFRTILPQCHALAARITLTVQKELQMLAVQTGVSAGQLRAAASASQVAASGALIQAPSPMTMSSEDEE
Ga0209230_105291381	3300027836	Freshwater And Sediment	MPQDSVDQRHKQWFRTILPQCHALAARITLTVQKELQMLMLAVQTGVSAGQLRAAASASQGVASGALLQIPSPMTMGS
Ga0209230_106851142	3300027836	Freshwater And Sediment	TSSLAHPLISELRGHFPWDGFTQHQQMALLLGTMPQAPVDQSHKQWFRTMLPQCHALAARITLTVQKELQRLAVKTGVSAGQLRAAACASHGVASGALLQIPSPMTMSSEDDE
Ga0315907_105651492	3300031758	Freshwater	GTMPQDPVGQRHKQWFRTILPQCHALAARITLTVQKELQMLAVQTGVSAGQLRAAASASQVAAGGALIRTPSPMTMSSEDEE
Ga0315907_106556361	3300031758	Freshwater	AHLYLSCPVTSPLAHPLISELRVRFPWDGFTQHQQMALLLGTMPQDSVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVQTGVSAGQLRAAASASQGVASGALLQIPSPMTMGSEDED
Ga0315907_106621281	3300031758	Freshwater	LGTMPQDPVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVQTGVSAGQLRAAASASQGVSSGALIQIPSPMTMSSEDEE
Ga0315907_106621671	3300031758	Freshwater	TAGTSTHFRASRSLPVGWLHATLLGTMPQDSVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVQTGVSAGQLRAAASASQGVASGALLQIPSPMTMGSEDEE
Ga0315907_107420491	3300031758	Freshwater	LGSEAHLYLSCPVTSPLAHPLISELRDRFPWDGFTQHQQMALLLGTMPQDSVDQGHKQWFRTILPQCHDLAARITLTVQKELQMLAVQTGVSAGQLRAAASASQGVASEVLLQIPSPMTMGSEDEE
Ga0315907_107982801	3300031758	Freshwater	HQQMALLLGTMPQDPVAQRHKQWFRMILPQCHALAARITLTVQKELQRLAVQTGVSAGQLRASASASQVVASGALIQIPSPMTMSSEDEE
Ga0315907_108802821	3300031758	Freshwater	QMALLLGTMPQDSVDQRHKQWFRTILPQCHALAARITLTVQKELQMLMLAVQTGVSAGQLRAAASASQGVASGALLQIPSPMTMGSEDEE
Ga0315907_108952792	3300031758	Freshwater	GTMPQAPVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVQAGVSAGQLRAAASASHGVASGALS
Ga0315907_110986911	3300031758	Freshwater	RHLGSEAHLYLSCPVTSPLAHPLISELRVRFQWDGFTQHQQMALLLGTMPQDPVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVQAGVSAGQLRAAASASQVVAGGALIQIPSPMPMSSEDEE
Ga0315907_111299721	3300031758	Freshwater	HKQWFRTMLPQCHALAARITLTVQKELQMLAVKTGVSAGQLRSAACASHEVASGALLQIPSPMTMSSEDDE
Ga0315907_111718022	3300031758	Freshwater	DPVAQRHKQWFRTILPQCHALAARITLTVQKELQMLAVQTGVSAGQLRAAASASQVATGGALIQAPSPTTMSSEDEE
Ga0315899_100089611	3300031784	Freshwater	MALLLGTMPQDSVDQRHKQWFRTILPQCHALAARITLTVQKELQMLMLAVQTGVSAGQLRAAASASQGVASGALLQIPSPMTMGSE
Ga0315899_101694282	3300031784	Freshwater	MALLLGTMPQAPVDQRHKQWFMTMLPQCHALAARITLTVQKELQMLAVRAGVSAGQLRAAASASHGVASGALS
Ga0315899_102505861	3300031784	Freshwater	PVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVQTGVSAGQLRAAASASQGVSSGALIQIPSPMTMSSEDEE
Ga0315899_102873782	3300031784	Freshwater	TQHQQMALLLGTMPQEPVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVQAGVTAGQLRAAASVSNGVASGALL
Ga0315899_104960441	3300031784	Freshwater	VTSPLAHPLISELRVRFQWDGFTQHQQMALLLGTMPQDPVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVQAGVSAGQLRAAASASQVVAGGALIQIPSPMPMSSEDEE
Ga0315899_105057542	3300031784	Freshwater	LGSEAHLYLSCTVTSPLAHPLISELRVCFPWDGFTQQQQMALLRGTMPQDPVAQRHKQWFRTILPQCHALAARITLTVQKELQMLAVQTGVSASQLRAAASASQVVAGGAFIQVPSPMTMSSEDEE
Ga0315899_105297432	3300031784	Freshwater	MALLLGTMPHDPVAQRHKQWFRTILPQCHALAARITLTVQKELQMLAVQTGVSAGQLRAAASASQVATGGALIQAPSPTTMSSEDEE
Ga0315899_106020951	3300031784	Freshwater	SEAHLYLSCTVTSPLAHPLISELRVRFPWDGFTLQQQMALLLGTMPQDPVAQRHKQWFRTILPQCHALAARITLTVQKELQMLAVQTGVSAGQLRAAASATQVVAGGALIQIPKFRPL
Ga0315899_107383702	3300031784	Freshwater	RHLGSEAHLYLSCPVTSPLAHPLISELRVRFLWDGFTQQQQMALLLGTMPQDPAAQRHKQWFRTILPQCHAQAARITLTVQKELQMVAVQTGVSAGQLRAAASAFHVAAGGALIQAPSPMTMSSEDEE
Ga0315899_107471341	3300031784	Freshwater	QQMALLLGTMPQDPVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVQTGVSAGQLRAAASTSKGVAGGALIQIPSPMTMSSEDEE
Ga0315899_111406641	3300031784	Freshwater	LYLSCTVTSPLAHPLISELRVRFPWDGFTQQQQMALLLGTMPQDPVAQRHKQWFGTILPLCHALAARITLTVQKELQMLAVQTGVSAGQFRAAASASQVVAGGALIQIPSPMTMSSEDEE
Ga0315899_112532291	3300031784	Freshwater	FTQHQQMALLLGTMPQAPVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVKTGVSAGQLRAAACASHGVASGALLQIPSPMTMSSEDDE
Ga0315899_115782181	3300031784	Freshwater	KQWFRTMLPQCHALAARITLTVQKELQMLAVQTGVSAGQLRAAASASQGVASGALLQIPSPMTMGSEDEA
Ga0315899_117807502	3300031784	Freshwater	PLISELRGHFPWDCFTQHQQMALLLGTMPQAPVDQRHKQWFKTMLPQCHALAARITLTVQKELQMLAVRAGVPADQLRAAASASNGVASGDLS
Ga0315908_105066072	3300031786	Freshwater	ISELRVCFPWDGFTQQQQMALLLGTMPQDPVAQRHKQWFRTILPQCHALAARITLTVQKELQMLAVQTGVSASQLRAAASASQVVAGGAFIQVPSPMTMSSEDEE
Ga0315908_106265882	3300031786	Freshwater	SELRVSFPWDGFTQHHQMALLLGAMPQDPVDQRHTQWFRTMLPQCHALAARITLTVQKELQMLSVQTGVSAGQLRAAASASPGVASGALLQIPSPMAMSPEDKE
Ga0315908_109140661	3300031786	Freshwater	CPRRHLGSEAHLYLSCPVTSPLAHPLISELRVRFLWDGFTQQQQMALLLGTMPQDPAAQRHKQWFRTILPQCHAQAARITLTVQKELQMVAVQTGVSAGQLRAAASAFHVAAGGALIQAPSPMTMSSEDEE
Ga0315908_109213801	3300031786	Freshwater	QMALLLGTMPQDSVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVKTGVSAGQLRAAASASQGVASGALLQIPSPMTMSSEDEE
Ga0315908_109374511	3300031786	Freshwater	SCTVTSPLAYPLIAELHARFTWDGFTQHQQMALLLGTMPQDPVAQRHKQRFRTILPQCHALAARITLTVQKELQRLAVQTGVSAGQLRASASASQVVASGALIQIPSPMTMSSEDEE
Ga0315908_109562432	3300031786	Freshwater	MPQNPVAQRRKQWFRTILPQCHALAARITLTVQKELQMLAVQTGVSAGQLRAAASASQVVVGGALIQVPSPMTMSSEDEE
Ga0315908_112570441	3300031786	Freshwater	YLSCPVTSPLAHPLISELRVRFQWDGFTQHQQMALLLGTMPQDPVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVQAGVSAGQLRAAASASQVVAGGALIQIPSPMPMSSEDEE
Ga0315900_101560553	3300031787	Freshwater	LGTMPQDPVAQRHKQWFRTILPQCHALAARITLTVQKELQMLAVQTGVSAGQLRAAASATQVVAGGALIQIPKFRPL
Ga0315900_103992381	3300031787	Freshwater	EAHLYLSCPVTSLLAHPLISELRGHFPWDGFTQHQQMALLLGTMPQAPVDQSHKQWFRTMLPQCHALAARITLTVQKELQMLAVKAGVSAGQLRAAVCASQRIASGALLQIPSPMTMSSEDDE
Ga0315900_108372451	3300031787	Freshwater	WFRTILPQCHALAARITLTVQKELQMLAVQTGVSAGQLRAAASASQVVASGTLIQIQSPMTMSSEDEE
Ga0315900_108465581	3300031787	Freshwater	LYLSCTVTSPLARPLISEFRVRFPWDGYTQQQQMALLLGTMPQDPVAQRQKQWFRTILPQCDALAARITLTVQKELQMLAVQAGVLAGQLRATASTSQVAASGVLIQAPSPMIMSSEDEE
Ga0315900_109612391	3300031787	Freshwater	HHQMALLLGTMPQDPVDQRHTQWFRTMLPQCHALAARITLTVQKELQMLSVQTGVSAGQLRAAASASPGVASGALLQIPSPMAMSPEDKE
Ga0315909_104071061	3300031857	Freshwater	FPWDGFTQHQQMALLLGTMPQAPVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVKAGVSAGQLRAAVCASQGVASGALLQIPSPMTMSSEDDE
Ga0315909_108356641	3300031857	Freshwater	SVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVQTGVSAGQLRAAASASQGVASGALLQIPSPMTMGSEDEE
Ga0315904_111781121	3300031951	Freshwater	LGTMPQAPVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVKAGVSAGQLRAAVCASQRIASGALLQIPSPMTMSSEDDE
Ga0315904_112654651	3300031951	Freshwater	TQQQQMALLLGTMPQDPVAQRHKQWFRTILPQCHALAARITLTVQKELQMLAVQTGVSAGQLRAAASASQVAASGALIQAPSPMTMSSEDEE
Ga0315906_101453192	3300032050	Freshwater	MALLLGTMPQDPVAQRHKQWFRTILPQCHALAARITLTVQKELQMLAVQTGVSAGQLRAAASATQVVAGGALIQIPKFRPL
Ga0315906_106502511	3300032050	Freshwater	HLYLSCPVTSPLAHPLISELRVRFQWDGFTQHQQMALLLGTMPQDPVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVQAGVSAGQLRAAASASQVVAGGALIQIPSPMPMSSEDE
Ga0315906_107209661	3300032050	Freshwater	WDGFTQQQQMALLLGTMPHDPVAQRHKQWFRTILPQCHALAARITLTVQKELQMLAVQTGVSAGQLRAAASASQVATGGALIQAPSPTTMSSEDEE
Ga0315906_109739411	3300032050	Freshwater	HLYLSCPVTSPLAHPLISEFRDRFPWDGFTQHQQMALLLGTMPQDSVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVKTGVSAGQLRAAASASQGVASGALLQIPSPMTMSSEDE
Ga0315906_112271511	3300032050	Freshwater	TQHQQMAFLLGTMPQAPVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVKAGVSAGQLRAAVCASQGVASGALLQIPSPMTMSSEDDE
Ga0315905_100145481	3300032092	Freshwater	MALLLGTMPQEPVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVQAGVTAGQLRAAASVSNGVASGALL
Ga0315905_100304256	3300032092	Freshwater	LLLGTMPQDPVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVQTGVSAGQLRAAASTSKGVAGGALIQIPSPMTMSSEDEE
Ga0315905_100468301	3300032092	Freshwater	MALLLGTMPQDSVDQRHKQWFRTILPQCHALAARITLTVQKELQMLMLAVQTGVSAGQLRAAASASQGVASGALLQIPSPM
Ga0315905_106372683	3300032092	Freshwater	MALLLGTMPQDPAAQRHKQWFRTILPQCHAQAARITLTVQKELQMVAVQTGVSAGQLRAAASAFHVAAGGALIQAPSPMTMSSEDEE
Ga0315905_107156641	3300032092	Freshwater	ISELRVRFPWDGFTQHQQMALLLGTMPQDPVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVKTGVSAGQLRAAASASQGVASGALIQIPSPMPMSSEDEE
Ga0315905_107658772	3300032092	Freshwater	PWDGFTQHQQMALLLGTMPQDSVDQRHKQWFRTMLTVQKELQMLGVQTGVSAGQLRAAASASQGVASGPDDYGL
Ga0315905_109490761	3300032092	Freshwater	HQQMALLLGTMPQAPVDQRHKQWFRTMLPQCHALAARITLTVQKELQRLAVKTGVSAGQLRAAACASHGVASGALLQIPSPMTMSSEDDE
Ga0315905_110791442	3300032092	Freshwater	TMPQAPVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVRAGVSAGQLRAAASASNGVASGALS
Ga0315905_111686831	3300032092	Freshwater	MPQGSVDQRHKQWFRTMLSQCHALAARITLTVQKELQMLAVKTGVSTGQLRAAASASQGVASGALLQIP
Ga0315905_112514261	3300032092	Freshwater	LISELRVRFPWDGFTQHQQMALLLGTMPQDSVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVQTGVSAGQLRAAASASQGVASGALLQIPSPMTMGSEDED
Ga0315905_114404031	3300032092	Freshwater	LISELRVRFPWDGFTQHQQMALLLGTMPQDSVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVQTGVSAGQLRAAASASKG
Ga0315905_114406952	3300032092	Freshwater	MALLLGTMPHDPVAQRHKQWFRTILPQCHALAARITLTVQKELQMLAVQTGVSAGQLRAAASASQVATGGALIQAPSPTTMSSE
Ga0315905_114913212	3300032092	Freshwater	MPQAPVDQRHKQWFRTMLPQCHALAARVTLTVQKELQMLAVKTGVSAGQLRAAVCASQRVASGALLQIPSPMTMSSEDDE
Ga0315905_115917091	3300032092	Freshwater	LGSEAHLYLSCPVTSLLAHPLISELRGHFPWDGFTQHQQMALLLGTMPQAPVDQSHKQWFRTMLPQCHALAARITLTVQKELQMLAVKAGVSAGQLRAAVCASQRIASGALLQIPSPMTMSSEDDE
Ga0334981_0102298_1_393	3300033980	Freshwater	PGRHLGSEAHLYLSCPVTSPLAHPLILELRARFPWDGFTQHQQMAFLLGTMPQGSVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVKTGVSAGQLRAAASASQGVASGALIQTPSPMTMSSEDEE
Ga0334989_0431118_2_385	3300033984	Freshwater	SELRGLFPWDGFTQHQQMALLLGTMPQAPVDQRHKQWFRTMLPLCHALAARITLTVQKELQMLAVHTGVSAGQLRAAASASQGVAGGALIQIPSPMTMSSADEEWPLRAGTHEYTCLLCLSSTGMDL
Ga0335021_0457632_411_656	3300034023	Freshwater	TMPQDSVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVQTGVSAGQLRAAASASQGVASGALLQIPSPMTMSSEDEE
Ga0335023_0337755_501_809	3300034050	Freshwater	MALLLGTMPQDPVDQRHKQWFRTMLPLCHALAARITLTVQKELQMLAVHTGVSAGQLRAAASASQGVAGGALIQIPSPMTMSSADEEWPLRAGTHEYTCLLCL
Ga0335000_0453819_1_246	3300034063	Freshwater	TMPQDSVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVKTGVSAGQLRAAASASQGVASGALLQIPSPMTMSSEDEE
Ga0335001_0118131_2_328	3300034064	Freshwater	HPLILELRARFPWDGFTQHQQMALLLGTMPQDSVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVKTGVSAGQLRAAASASQGVASGALLQIPSPMTMSSEDEE
Ga0335019_0291245_634_1026	3300034066	Freshwater	RRCPLCPRRHLGSEAHLYLSCTVTSPLAHPLISELRVRFPWDGFTLQQQMALLLGTMPQDPVAQRHKQWFRTILPQCHALAARITLTVQKELQMLAVQTGVSAGQLRAAASATQVVAGGALIQIPKFRPL
Ga0335019_0671276_344_598	3300034066	Freshwater	LLGTMPQAPVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVKAGVSAGQLRAAVCASQGVASGALLQIPSPMTMSSEDDE
Ga0334990_0246020_2_376	3300034068	Freshwater	SEAHVYLSCPVTSPLAHPLISELCTRFPWDDFTQHQQMALLLGTMSQDPVDQRHKQWFRTMLPLCHALAARITLTVQKELQMLAVQTGMSAGQLRAAASASQGVASGALIQIPSPMTMSSEDEE
Ga0335014_0341493_3_284	3300034094	Freshwater	FTQHQQMALLLGTMPQAPVDQRHKQWFRTMLPQYHALAARITLTVQKELQMLAVKTGVSAGQLRAVASASQGVASGALLQIPSPMTMSSEDDE
Ga0335022_0311259_1_306	3300034095	Freshwater	THLRASRSLPVGWLHATLLGTMPQDSVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVQTGVSAGQLRAAASASQGVASGALLQIPSPMTMGSEDEE
Ga0335022_0338753_3_275	3300034095	Freshwater	HHQMALLLGAMPQDPVDQRHTQWFRTMLPQCHALAARITLTAQKELQMLSVQTGVSAGQLRAAASASPGVASGALLQIPSPMAMSAEDKE
Ga0335022_0345593_550_822	3300034095	Freshwater	RISGGHFQWDDFTQHQQMSLLLGTMPQAPVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVQAGVSAGQLRAAASASNGVASGALS
Ga0335022_0395850_1_273	3300034095	Freshwater	QQQMALLLGTMPQDPVAQRHKQWFRTILPQCHALAARITLTVQKELQMLAVQTGVSAGQLRAAASASQVATGGALIQAPSPTTMSSEDEE
Ga0335022_0405893_508_735	3300034095	Freshwater	MPQNPVAQRRKQWFRTILPQCHALAARITLTVQKELQMLAVQTGVSAGQLRAAASASQVVVGGALIQVPSPMTMSS
Ga0335022_0498423_2_310	3300034095	Freshwater	LRVRFQWDGFTQQQQMALLLGTMPQDPVDQRHKQWFRTILPQCHALAARITLTVQKELQMLAVQTGGSAGQLRAAAIAPQVVAGGALIQVPSPMTMSSEDEE
Ga0335022_0580964_313_567	3300034095	Freshwater	LLGTMPQDSVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVKTGVSAGQLRAAASASQGVASGALLQIPSPMTMSSEDEE
Ga0335022_0653976_2_265	3300034095	Freshwater	RGHFPWDDFTQHQQMSLLLGTMPQAPVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVQAGVSAGQLRAAASASNGVASGALS
Ga0335027_0558725_440_703	3300034101	Freshwater	MALLLGTMPQDSVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVKTGVSAGQLRAAASASQGVASGALLQIPSPMTMSSEDEE
Ga0335035_0545697_1_348	3300034105	Freshwater	PVTSPLAHPLISEFRDRFPWDGFTQHQQMALLLGTMPQDSVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVQTGVSAGQLRAAASASQGVASGALIQIPSPMTMRSEDEE
Ga0335037_0484142_3_428	3300034107	Freshwater	TQYGDRRCPLCPGRHLGSEAHVYLSCPVTSPLAHPLISELCTRFPWDDFTQHQQMALLLGTMSQDPVDQRHKQWFRTMLPLCHALAARITLTVQKELQMLAVQTGMSAGQLRAAASASQGVASGALIQIPSPMTMSSEDEE
Ga0335051_0090942_1239_1592	3300034109	Freshwater	SCPVTSPLAHPLISEFRDRFPWDGFTQHQQMALLLGTMPQDSVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVKTGVSAGQLRAAASASQGVASGALLQIPSPMTMSSEDEE
Ga0335068_0100950_1241_1615	3300034116	Freshwater	SEAHLYLSCPVTSPLAHPLILELRARFPWDGFTQHQQMAFLLGTMPQDSVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVKTGVSAGQLRAAASASQGVASGALLQIPSPMTMSSEDEE
Ga0335058_0616689_2_250	3300034121	Freshwater	GTMPQDSVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVKTGVSTGQLRAAASASQGVASGALLQIPSPMTMSSEDEE
Ga0335060_0307126_573_866	3300034122	Freshwater	PWDGFTQQQQMALLLGTMPQDPVAQRHKQWFRTILPQCHALAARITLTVQKELQMLAVQTGMSAGQLRAAASASKVTASGVLLQAPSSTTLTSEDEE
Ga0335060_0611511_327_545	3300034122	Freshwater	RHKQWFRTMLPQCHALAARITLTVQKELQMLAVQTGVSAGQLRAAASASQGVASGALLQIPSPMTMSSEDEE
Ga0335016_0312883_674_955	3300034166	Freshwater	FTQHQQMALLLGTMPQAPVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVKAGVSAGQLRAAVCASQGVASGALLQIPSPMTMSSEDDE
Ga0335017_0229020_780_1055	3300034167	Freshwater	QHQQMALLLGTMPQAPVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVKAGVSAGQLRAAVCASQGVASGALLQIPSPMTMSSEDDE
Ga0335017_0287401_509_919	3300034167	Freshwater	RRCPLCPRRHLGSEAHLYLSCTVTSPLAHPLISELRVRFPWDGFTLQQQMALLLGTMPQDPVAQRHKQWFRTILPQCHALAARITLTVQKELQMLAVQTGVSAGQLRAAASASQGVAGGALIQIPSPMTMSSEDEE
Ga0335017_0366538_489_788	3300034167	Freshwater	RFLWNGFTQQQQMALLLGTMPQDPVGQRHKQWFRTILPQCHALAARITLTVQKELQMLAVQTGVSAGQLRAAASASQVAAGGALIRTPSPMTMSSEDEE
Ga0335017_0707820_284_511	3300034167	Freshwater	VDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVQTGVSAGQLRAAASASQGVASGALLQIPSPMTMGSEDEE
Ga0335065_0802204_2_391	3300034200	Freshwater	GRHLGNEAHLYLSCPVTSSLAHPLISELRGHFPWDGFTQHQQMALLLGTMPQTPIDQRHKQWFRTMLPQCHALAARITLTAQKELQMLAVKTGVSAGQLRAAACASHGVASGALLQIPSPMTMSSEDDE
Ga0335064_0210338_1018_1227	3300034357	Freshwater	MPQDPVAQRHKQWFRTILPQCHALAARITLTVQTELQMLAVQAGVSAGQLRAAASASQVTASGVLIQAPS
Ga0335064_0364921_684_920	3300034357	Freshwater	QDPVDQRHKQWFRTMLPLCHALAARITLTVQKELQMLAVQTGMSAGQLRAAASASQGVASGALIQIPSPMTMSSEDEE
Ga0335064_0494377_2_316	3300034357	Freshwater	LLCPVTSSLAHPLISELRGHFPWDDFTQHQQMSLLLGTMPQAPVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVQAGVPAGQLRAAASASHGVASGALG
Ga0335064_0514260_479_757	3300034357	Freshwater	TQHQQMALLLGTMPQDSVDQRHKQWFRTMLPQCHALAARITLTVQKELQMLAVQTGVSAGQLRAAASASQGVASGALLQIPSPMTMGSEDED
Ga0335064_0616857_362_679	3300034357	Freshwater	ISELRVSFQWDGFTQHHQMALLLGTMPQDPVDQRHTQWFRTMLPQCHALAARITLTAQKELQMLSVQTGVSAGQLRAAASASPGVASGALLQIPSPMAMSAEDKE
Ga0335064_0856121_213_551	3300034357	Freshwater	SSLAHPLISELRVRFPWDGFTQHQQMALLLGTMPQDPVDQRHTQWFRTMLPQCHALAARITLTVQKELQMLAVQTGVSPGQLRAAASASQGVASWTLLQIPSPVAMSPEDEE
Ga0335064_0975982_267_503	3300034357	Freshwater	PPGFTQHQQMALLLGTMPQEPVDQRHKQWFRMMLPQCHALALTVQKELQMLEVQAEVSAGLLRAAATASNGVRSGALI

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F043224

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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