Metagenome / Metatranscriptome Family F043128

Basic Information
Family ID	F043128
Family Type	Metagenome / Metatranscriptome
Number of Sequences	157
Average Sequence Length	53 residues
Representative Sequence	QATISAIATFIGDIFAHPSHFPPQWAEPTVTAAVSGGIAIALWYAKRWAKSL
Number of Associated Samples	140
Number of Associated Scaffolds	157

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	95.54 %
% of genes from short scaffolds (< 2000 bps)	89.81 %
Associated GOLD sequencing projects	132
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Most Common Taxonomy
Group	Bacteria (89.809 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (17.197 % of family members)
Environment Ontology (ENVO)	Unclassified (29.936 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (43.312 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.00% β-sheet: 0.00% Coil/Unstructured: 45.00%
Feature Viewer

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Pfam ID	Name	% Frequency in 157 Family Scaffolds
PF04392	ABC_sub_bind	9.55
PF00152	tRNA-synt_2	4.46
PF12840	HTH_20	2.55
PF07681	DoxX	1.91
PF00535	Glycos_transf_2	1.91
PF07690	MFS_1	1.91
PF07883	Cupin_2	1.27
PF08734	GYD	1.27
PF01551	Peptidase_M23	1.27
PF00890	FAD_binding_2	1.27
PF01494	FAD_binding_3	1.27
PF00497	SBP_bac_3	1.27
PF01336	tRNA_anti-codon	0.64
PF07732	Cu-oxidase_3	0.64
PF00313	CSD	0.64
PF01638	HxlR	0.64
PF11391	DUF2798	0.64
PF01965	DJ-1_PfpI	0.64
PF00037	Fer4	0.64
PF13751	DDE_Tnp_1_6	0.64
PF12681	Glyoxalase_2	0.64
PF13417	GST_N_3	0.64
PF08241	Methyltransf_11	0.64
PF13531	SBP_bac_11	0.64
PF13505	OMP_b-brl	0.64
PF02574	S-methyl_trans	0.64
PF00083	Sugar_tr	0.64
PF00128	Alpha-amylase	0.64
PF00378	ECH_1	0.64
PF14235	DUF4337	0.64
PF16914	TetR_C_12	0.64
PF07992	Pyr_redox_2	0.64
PF00486	Trans_reg_C	0.64
PF01243	Putative_PNPOx	0.64
PF02910	Succ_DH_flav_C	0.64
PF01738	DLH	0.64
PF05721	PhyH	0.64
PF00578	AhpC-TSA	0.64
PF04055	Radical_SAM	0.64
PF00583	Acetyltransf_1	0.64
PF13432	TPR_16	0.64
PF03401	TctC	0.64

COG ID	Name	Functional Category	% Frequency in 157 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	9.55
COG0173	Aspartyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	4.46
COG0017	Aspartyl/asparaginyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	4.46
COG1190	Lysyl-tRNA synthetase, class II	Translation, ribosomal structure and biogenesis [J]	4.46
COG2269	Elongation factor P--beta-lysine ligase (EF-P beta-lysylation pathway)	Translation, ribosomal structure and biogenesis [J]	4.46
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	2.55
COG4270	Uncharacterized membrane protein	Function unknown [S]	1.91
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	1.91
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	1.27
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	1.27
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	1.27
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	1.27
COG5285	Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.64
COG3280	Maltooligosyltrehalose synthase	Carbohydrate transport and metabolism [G]	0.64
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.64
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	0.64
COG2040	Homocysteine/selenocysteine methylase (S-methylmethionine-dependent)	Amino acid transport and metabolism [E]	0.64
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.64
COG1523	Pullulanase/glycogen debranching enzyme	Carbohydrate transport and metabolism [G]	0.64
COG0646	Methionine synthase I (cobalamin-dependent), methyltransferase domain	Amino acid transport and metabolism [E]	0.64
COG0366	Glycosidase/amylase (phosphorylase)	Carbohydrate transport and metabolism [G]	0.64
COG0296	1,4-alpha-glucan branching enzyme	Carbohydrate transport and metabolism [G]	0.64

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.45 %
Unclassified	root	N/A	9.55 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.45 %
Unclassified	root	N/A	9.55 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.81 %
Unclassified	root	N/A	9.55 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.64 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	71.34 %
Unclassified	root	N/A	9.55 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.64 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.64 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	33.12 %
Unclassified	root	N/A	9.55 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.91 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.64 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	0.64 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	11.46 %
Unclassified	root	N/A	9.55 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	3.18 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.91 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	0.64 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	9.55 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.18 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.55 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.91 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.64 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.64 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.64 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	9.55 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.18 %
Caballeronia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia	1.27 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.91 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.64 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.64 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.64 %
Deuterostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	9.55 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.18 %
Caballeronia megalochromosomata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia → Caballeronia megalochromosomata	1.27 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.91 %
unclassified Methylobacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium	0.64 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.64 %
Chordata	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata	0.64 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	9.55 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.18 %
Caballeronia megalochromosomata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia → Caballeronia megalochromosomata	1.27 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.91 %
Craniata	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata	0.64 %
Rhodoplanes sp. JGI PP 4-B12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	0.64 %
Methylobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp.	0.64 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	9.55 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.18 %
Caballeronia megalochromosomata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia → Caballeronia megalochromosomata	1.27 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.91 %
Vertebrata	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata	0.64 %
Rhodoplanes sp. JGI PP 4-B12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	0.64 %
Methylobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp.	0.64 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	9.55 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.18 %
Caballeronia megalochromosomata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia → Caballeronia megalochromosomata	1.27 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.91 %
Gnathostomata	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata	0.64 %
Rhodoplanes sp. JGI PP 4-B12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	0.64 %
Methylobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp.	0.64 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	9.55 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.18 %
Caballeronia megalochromosomata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia → Caballeronia megalochromosomata	1.27 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.91 %
Chondrichthyes	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes	0.64 %
Rhodoplanes sp. JGI PP 4-B12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	0.64 %
Methylobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp.	0.64 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	9.55 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.18 %
Caballeronia megalochromosomata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia → Caballeronia megalochromosomata	1.27 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.91 %
Elasmobranchii	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii	0.64 %
Rhodoplanes sp. JGI PP 4-B12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	0.64 %
Methylobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp.	0.64 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	9.55 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.18 %
Caballeronia megalochromosomata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia → Caballeronia megalochromosomata	1.27 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.91 %
Selachii	infraclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii	0.64 %
Rhodoplanes sp. JGI PP 4-B12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	0.64 %
Methylobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp.	0.64 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	9.55 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.18 %
Caballeronia megalochromosomata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia → Caballeronia megalochromosomata	1.27 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.91 %
Galeomorphii	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii → Galeomorphii	0.64 %
Rhodoplanes sp. JGI PP 4-B12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	0.64 %
Methylobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp.	0.64 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	9.55 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.18 %
Caballeronia megalochromosomata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia → Caballeronia megalochromosomata	1.27 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.91 %
Galeoidea	superorder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii → Galeomorphii → Galeoidea	0.64 %
Rhodoplanes sp. JGI PP 4-B12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	0.64 %
Methylobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp.	0.64 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	9.55 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.18 %
Caballeronia megalochromosomata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia → Caballeronia megalochromosomata	1.27 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.91 %
Orectolobiformes	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii → Galeomorphii → Galeoidea → Orectolobiformes	0.64 %
Rhodoplanes sp. JGI PP 4-B12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	0.64 %
Methylobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp.	0.64 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	9.55 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.18 %
Caballeronia megalochromosomata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia → Caballeronia megalochromosomata	1.27 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.91 %
Hemiscylliidae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii → Galeomorphii → Galeoidea → Orectolobiformes → Hemiscylliidae	0.64 %
Rhodoplanes sp. JGI PP 4-B12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	0.64 %
Methylobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp.	0.64 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	9.55 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.18 %
Caballeronia megalochromosomata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia → Caballeronia megalochromosomata	1.27 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.91 %
Chiloscyllium	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii → Galeomorphii → Galeoidea → Orectolobiformes → Hemiscylliidae → Chiloscyllium	0.64 %
Rhodoplanes sp. JGI PP 4-B12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	0.64 %
Methylobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp.	0.64 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	9.55 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.18 %
Caballeronia megalochromosomata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia → Caballeronia megalochromosomata	1.27 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.91 %
Chiloscyllium punctatum	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii → Galeomorphii → Galeoidea → Orectolobiformes → Hemiscylliidae → Chiloscyllium → Chiloscyllium punctatum	0.64 %
Rhodoplanes sp. JGI PP 4-B12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	0.64 %
Methylobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp.	0.64 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.64 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459017\|G14TP7Y02H91JM	Not Available	505	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10139575	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	586	Open in IMG/M
3300000789\|JGI1027J11758_11978873	All Organisms → cellular organisms → Bacteria → Proteobacteria	573	Open in IMG/M
3300001976\|JGI24752J21851_1016266	All Organisms → cellular organisms → Bacteria	968	Open in IMG/M
3300001991\|JGI24743J22301_10002233	All Organisms → cellular organisms → Bacteria	2876	Open in IMG/M
3300002075\|JGI24738J21930_10015643	All Organisms → cellular organisms → Bacteria	1611	Open in IMG/M
3300003215\|JGI25153J46596_10145369	Not Available	514	Open in IMG/M
3300004479\|Ga0062595_101890721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	571	Open in IMG/M
3300005093\|Ga0062594_102284604	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	588	Open in IMG/M
3300005165\|Ga0066869_10003082	All Organisms → cellular organisms → Bacteria → Proteobacteria	1955	Open in IMG/M
3300005183\|Ga0068993_10082198	All Organisms → cellular organisms → Bacteria → Proteobacteria	1002	Open in IMG/M
3300005205\|Ga0068999_10062154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	683	Open in IMG/M
3300005332\|Ga0066388_100107453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp.	3275	Open in IMG/M
3300005332\|Ga0066388_103263795	All Organisms → cellular organisms → Bacteria → Proteobacteria	829	Open in IMG/M
3300005332\|Ga0066388_106223433	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300005332\|Ga0066388_107653598	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia → Caballeronia megalochromosomata	541	Open in IMG/M
3300005337\|Ga0070682_101758042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	540	Open in IMG/M
3300005356\|Ga0070674_100900040	All Organisms → cellular organisms → Bacteria → Proteobacteria	771	Open in IMG/M
3300005438\|Ga0070701_10127124	All Organisms → cellular organisms → Bacteria	1444	Open in IMG/M
3300005439\|Ga0070711_100572642	All Organisms → cellular organisms → Bacteria → Proteobacteria	939	Open in IMG/M
3300005456\|Ga0070678_100376797	All Organisms → cellular organisms → Bacteria → Proteobacteria	1227	Open in IMG/M
3300005615\|Ga0070702_100571712	All Organisms → cellular organisms → Bacteria → Proteobacteria	843	Open in IMG/M
3300005615\|Ga0070702_100899087	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300005618\|Ga0068864_102041767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	579	Open in IMG/M
3300005719\|Ga0068861_100505683	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300005764\|Ga0066903_101903288	All Organisms → cellular organisms → Bacteria → Proteobacteria	1139	Open in IMG/M
3300005764\|Ga0066903_103164135	All Organisms → cellular organisms → Bacteria → Proteobacteria	891	Open in IMG/M
3300006163\|Ga0070715_10108987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1303	Open in IMG/M
3300006172\|Ga0075018_10465020	All Organisms → cellular organisms → Bacteria → Proteobacteria	654	Open in IMG/M
3300006178\|Ga0075367_10192862	All Organisms → cellular organisms → Bacteria → Proteobacteria	1271	Open in IMG/M
3300006178\|Ga0075367_10412484	All Organisms → cellular organisms → Bacteria → Proteobacteria	855	Open in IMG/M
3300006574\|Ga0074056_11385707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	584	Open in IMG/M
3300006579\|Ga0074054_10012271	Not Available	621	Open in IMG/M
3300006581\|Ga0074048_13370447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	892	Open in IMG/M
3300006604\|Ga0074060_12012403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	508	Open in IMG/M
3300006605\|Ga0074057_10049172	All Organisms → cellular organisms → Bacteria → Proteobacteria	2594	Open in IMG/M
3300006606\|Ga0074062_13002552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	503	Open in IMG/M
3300006797\|Ga0066659_10247591	All Organisms → cellular organisms → Bacteria → Proteobacteria	1332	Open in IMG/M
3300006880\|Ga0075429_101795185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia → Caballeronia megalochromosomata	532	Open in IMG/M
3300009036\|Ga0105244_10307437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	733	Open in IMG/M
3300009089\|Ga0099828_11535687	All Organisms → cellular organisms → Bacteria → Proteobacteria	587	Open in IMG/M
3300009094\|Ga0111539_11795296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	711	Open in IMG/M
3300009148\|Ga0105243_12673298	All Organisms → cellular organisms → Bacteria → Proteobacteria	539	Open in IMG/M
3300009156\|Ga0111538_12428641	All Organisms → cellular organisms → Bacteria → Proteobacteria	658	Open in IMG/M
3300009551\|Ga0105238_12100570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	599	Open in IMG/M
3300009553\|Ga0105249_12392992	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300009870\|Ga0131092_11093996	All Organisms → cellular organisms → Bacteria → Proteobacteria	637	Open in IMG/M
3300010048\|Ga0126373_10495291	All Organisms → cellular organisms → Bacteria	1264	Open in IMG/M
3300010376\|Ga0126381_100651630	All Organisms → cellular organisms → Bacteria	1502	Open in IMG/M
3300010397\|Ga0134124_11094770	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300012096\|Ga0137389_11477457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	575	Open in IMG/M
3300012285\|Ga0137370_10121214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1491	Open in IMG/M
3300012494\|Ga0157341_1047473	Not Available	515	Open in IMG/M
3300012683\|Ga0137398_11051412	All Organisms → cellular organisms → Bacteria → Proteobacteria	562	Open in IMG/M
3300012923\|Ga0137359_11190370	All Organisms → cellular organisms → Bacteria → Proteobacteria	650	Open in IMG/M
3300012948\|Ga0126375_10108035	All Organisms → cellular organisms → Bacteria	1666	Open in IMG/M
3300012955\|Ga0164298_11188741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	577	Open in IMG/M
3300012957\|Ga0164303_10421691	All Organisms → cellular organisms → Bacteria → Proteobacteria	831	Open in IMG/M
3300012971\|Ga0126369_10905539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	967	Open in IMG/M
3300012984\|Ga0164309_10241355	All Organisms → cellular organisms → Bacteria → Proteobacteria	1269	Open in IMG/M
3300012988\|Ga0164306_10362843	All Organisms → cellular organisms → Bacteria → Proteobacteria	1077	Open in IMG/M
3300012989\|Ga0164305_10031105	All Organisms → cellular organisms → Bacteria → Proteobacteria	2928	Open in IMG/M
3300012989\|Ga0164305_10306605	All Organisms → cellular organisms → Bacteria → Proteobacteria	1176	Open in IMG/M
3300013306\|Ga0163162_13373036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	510	Open in IMG/M
3300014266\|Ga0075359_1124015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	554	Open in IMG/M
3300014324\|Ga0075352_1125815	Not Available	698	Open in IMG/M
3300014325\|Ga0163163_12803272	All Organisms → cellular organisms → Bacteria → Proteobacteria	544	Open in IMG/M
3300014745\|Ga0157377_10925293	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300014968\|Ga0157379_11232587	All Organisms → cellular organisms → Bacteria → Proteobacteria	720	Open in IMG/M
3300014969\|Ga0157376_12794677	All Organisms → cellular organisms → Bacteria → Proteobacteria	528	Open in IMG/M
3300015371\|Ga0132258_11117304	All Organisms → cellular organisms → Bacteria → Proteobacteria	1992	Open in IMG/M
3300016270\|Ga0182036_10987032	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300016294\|Ga0182041_11400672	All Organisms → cellular organisms → Bacteria → Proteobacteria	642	Open in IMG/M
3300016319\|Ga0182033_10010507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5207	Open in IMG/M
3300016371\|Ga0182034_10591760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	935	Open in IMG/M
3300016422\|Ga0182039_10819929	All Organisms → cellular organisms → Bacteria → Proteobacteria	827	Open in IMG/M
3300016422\|Ga0182039_11634066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	589	Open in IMG/M
3300017947\|Ga0187785_10725353	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii → Galeomorphii → Galeoidea → Orectolobiformes → Hemiscylliidae → Chiloscyllium → Chiloscyllium punctatum	523	Open in IMG/M
3300018476\|Ga0190274_12055157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	668	Open in IMG/M
3300019361\|Ga0173482_10419431	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300019876\|Ga0193703_1022038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	979	Open in IMG/M
3300020583\|Ga0210401_10307983	All Organisms → cellular organisms → Bacteria → Proteobacteria	1444	Open in IMG/M
3300021168\|Ga0210406_10798614	All Organisms → cellular organisms → Bacteria → Proteobacteria	718	Open in IMG/M
3300021171\|Ga0210405_11328090	All Organisms → cellular organisms → Bacteria → Proteobacteria	527	Open in IMG/M
3300021180\|Ga0210396_10227778	All Organisms → cellular organisms → Bacteria → Proteobacteria	1660	Open in IMG/M
3300021404\|Ga0210389_10829461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	722	Open in IMG/M
3300021479\|Ga0210410_11645872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	535	Open in IMG/M
3300021510\|Ga0222621_1028973	Not Available	1135	Open in IMG/M
3300021559\|Ga0210409_11699188	All Organisms → cellular organisms → Bacteria → Proteobacteria	508	Open in IMG/M
3300021968\|Ga0193698_1055361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	505	Open in IMG/M
3300025916\|Ga0207663_10230316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1353	Open in IMG/M
3300025918\|Ga0207662_10860627	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300025918\|Ga0207662_11104974	All Organisms → cellular organisms → Bacteria → Proteobacteria	564	Open in IMG/M
3300025919\|Ga0207657_10427886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1040	Open in IMG/M
3300025923\|Ga0207681_11574173	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	550	Open in IMG/M
3300025924\|Ga0207694_11225539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	635	Open in IMG/M
3300025928\|Ga0207700_10755748	All Organisms → cellular organisms → Bacteria → Proteobacteria	869	Open in IMG/M
3300025944\|Ga0207661_10117628	All Organisms → cellular organisms → Bacteria	2258	Open in IMG/M
3300025945\|Ga0207679_10196014	All Organisms → cellular organisms → Bacteria	1683	Open in IMG/M
3300025973\|Ga0210145_1028158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	644	Open in IMG/M
3300025986\|Ga0207658_11497371	All Organisms → cellular organisms → Bacteria → Proteobacteria	617	Open in IMG/M
3300026088\|Ga0207641_10113906	All Organisms → cellular organisms → Bacteria	2402	Open in IMG/M
3300026121\|Ga0207683_11556077	Not Available	610	Open in IMG/M
3300026514\|Ga0257168_1015839	Not Available	1508	Open in IMG/M
3300026557\|Ga0179587_10192293	All Organisms → cellular organisms → Bacteria	1290	Open in IMG/M
3300027050\|Ga0209325_1007511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1183	Open in IMG/M
3300027288\|Ga0208525_1000384	All Organisms → cellular organisms → Bacteria	4219	Open in IMG/M
3300027548\|Ga0209523_1134417	All Organisms → cellular organisms → Bacteria → Proteobacteria	509	Open in IMG/M
3300027560\|Ga0207981_1005046	All Organisms → cellular organisms → Bacteria	2344	Open in IMG/M
3300027680\|Ga0207826_1036279	All Organisms → cellular organisms → Bacteria → Proteobacteria	1371	Open in IMG/M
3300027866\|Ga0209813_10325671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	603	Open in IMG/M
3300027889\|Ga0209380_10633952	All Organisms → cellular organisms → Bacteria → Proteobacteria	617	Open in IMG/M
3300027907\|Ga0207428_11303139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	503	Open in IMG/M
3300028023\|Ga0265357_1032393	All Organisms → cellular organisms → Bacteria → Proteobacteria	600	Open in IMG/M
3300028597\|Ga0247820_11144800	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	560	Open in IMG/M
3300028608\|Ga0247819_10266747	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	947	Open in IMG/M
3300028709\|Ga0307279_10123275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	502	Open in IMG/M
3300028713\|Ga0307303_10161277	Not Available	542	Open in IMG/M
3300028717\|Ga0307298_10037827	Not Available	1299	Open in IMG/M
3300028812\|Ga0247825_10648592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	758	Open in IMG/M
3300028875\|Ga0307289_10054789	Not Available	1597	Open in IMG/M
3300031198\|Ga0307500_10145947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	672	Open in IMG/M
3300031226\|Ga0307497_10016088	All Organisms → cellular organisms → Bacteria	2220	Open in IMG/M
3300031561\|Ga0318528_10660045	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	560	Open in IMG/M
3300031561\|Ga0318528_10676365	All Organisms → cellular organisms → Bacteria → Proteobacteria	553	Open in IMG/M
3300031573\|Ga0310915_10060368	All Organisms → cellular organisms → Bacteria	2472	Open in IMG/M
3300031573\|Ga0310915_10855656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	638	Open in IMG/M
3300031573\|Ga0310915_11283945	All Organisms → cellular organisms → Bacteria → Proteobacteria	504	Open in IMG/M
3300031681\|Ga0318572_10590442	All Organisms → cellular organisms → Bacteria → Proteobacteria	662	Open in IMG/M
3300031682\|Ga0318560_10488086	Not Available	667	Open in IMG/M
3300031744\|Ga0306918_10937015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	674	Open in IMG/M
3300031744\|Ga0306918_11385070	All Organisms → cellular organisms → Bacteria → Proteobacteria	539	Open in IMG/M
3300031751\|Ga0318494_10646320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	619	Open in IMG/M
3300031819\|Ga0318568_10441997	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	811	Open in IMG/M
3300031910\|Ga0306923_10891776	All Organisms → cellular organisms → Bacteria → Proteobacteria	975	Open in IMG/M
3300031910\|Ga0306923_11132125	All Organisms → cellular organisms → Bacteria → Proteobacteria	841	Open in IMG/M
3300031942\|Ga0310916_10071268	All Organisms → cellular organisms → Bacteria	2719	Open in IMG/M
3300031947\|Ga0310909_11087460	All Organisms → cellular organisms → Bacteria → Proteobacteria	650	Open in IMG/M
3300031962\|Ga0307479_11253265	All Organisms → cellular organisms → Bacteria → Proteobacteria	704	Open in IMG/M
3300032013\|Ga0310906_10372532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	935	Open in IMG/M
3300032035\|Ga0310911_10889657	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300032051\|Ga0318532_10029863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1811	Open in IMG/M
3300032059\|Ga0318533_10298767	All Organisms → cellular organisms → Bacteria → Proteobacteria	1168	Open in IMG/M
3300032059\|Ga0318533_11414817	All Organisms → cellular organisms → Bacteria → Proteobacteria	508	Open in IMG/M
3300032060\|Ga0318505_10561211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	537	Open in IMG/M
3300032076\|Ga0306924_12043888	All Organisms → cellular organisms → Bacteria → Proteobacteria	589	Open in IMG/M
3300032090\|Ga0318518_10353004	All Organisms → cellular organisms → Bacteria → Proteobacteria	755	Open in IMG/M
3300032174\|Ga0307470_10623865	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	810	Open in IMG/M
3300032261\|Ga0306920_101505790	All Organisms → cellular organisms → Bacteria	960	Open in IMG/M
3300032261\|Ga0306920_102735768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	673	Open in IMG/M
3300032421\|Ga0310812_10425637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	598	Open in IMG/M
3300033004\|Ga0335084_10448006	All Organisms → cellular organisms → Bacteria → Proteobacteria	1328	Open in IMG/M
3300033134\|Ga0335073_11277451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	728	Open in IMG/M
3300033412\|Ga0310810_10160272	All Organisms → cellular organisms → Bacteria	2601	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	77.07%
Host-Associated	Host-Associated	21.66%
Engineered	Engineered	1.27%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.89%
Plants	Host-Associated → Plants	21.66%
Aquatic	Environmental → Aquatic	3.18%
Solid Waste	Engineered → Solid Waste	0.64%
Wastewater	Engineered → Wastewater	0.64%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.46%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.64%
Roots	Host-Associated → Plants → Roots	2.55%
Marine	Environmental → Aquatic → Marine	1.91%
Sediment	Environmental → Aquatic → Sediment	1.27%
Grass	Engineered → Solid Waste → Grass	0.64%
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.64%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.69%
Loam	Environmental → Terrestrial → Soil → Loam	14.01%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.64%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.73%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.82%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.18%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.91%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	1.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.27%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.27%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.64%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.64%
Composting	Engineered → Solid Waste → Grass → Composting	0.64%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.64%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	27.39%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.64%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.01%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.01%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.82%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.18%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.55%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.91%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	1.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.27%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.27%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.27%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.27%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.64%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.64%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.64%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.64%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.28%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.73%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.10%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.46%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.55%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.55%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.91%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	1.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.27%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.27%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.27%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.27%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.27%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.27%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.27%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.27%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.27%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.27%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.27%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.27%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.27%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.27%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.27%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.64%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.64%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.64%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.64%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.64%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.64%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.64%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.64%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.64%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.64%
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	0.64%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459017	Litter degradation ZMR4	Engineered	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001976	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S7	Host-Associated	Open in IMG/M
3300001991	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2	Host-Associated	Open in IMG/M
3300002075	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4	Host-Associated	Open in IMG/M
3300003215	Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005183	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1	Environmental	Open in IMG/M
3300005205	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D2	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300009036	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG	Host-Associated	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009870	Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Linkou plant	Engineered	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012494	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.yng.030610	Host-Associated	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014266	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_TuleB_D1	Environmental	Open in IMG/M
3300014324	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D1	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019876	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3a2	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021968	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c1	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025973	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300026839	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 52 (SPAdes)	Environmental	Open in IMG/M
3300027050	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027288	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC (SPAdes)	Environmental	Open in IMG/M
3300027548	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027560	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300027866	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes)	Host-Associated	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028023	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE5	Host-Associated	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028608	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6	Environmental	Open in IMG/M
3300028709	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_118	Environmental	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F043128

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4ZMR_03429100	2170459017	Switchgrass, Maize And Mischanthus Litter	WSFSSKLDRTVNSLSRQMTISAFATFIGDRFCAPFAFPAQWGEPLVTAGVSAAIAVALWQAKRLVAGL
AF_2010_repII_A1DRAFT_101395751	3300000597	Forest Soil	DIFAHPSHFPPQWAEPAVTAAVSACIAIALWYGKRWARSL*
JGI1027J11758_119788732	3300000789	Soil	SAIATFIGDIFAHPSHFAPQWAEPTVTAVVSGGIAIALWYAKRWAKSL*
JGI24752J21851_10162661	3300001976	Corn, Switchgrass And Miscanthus Rhizosphere	TRQATISAVATFVGDIFAHPSHFPPQWAEPVVTAAVSAGIAIALWYARRWMKTATA*
JGI24743J22301_100022331	3300001991	Corn, Switchgrass And Miscanthus Rhizosphere	TISAVATFXGDIFAHPSHFPPQWAEPVVTAAVSAGIAIALWYARRWMKTATA*
JGI24738J21930_100156433	3300002075	Corn Rhizosphere	VQMDRTTDSVTRQATISAVATFVGDIFAHPSHFPPQWAEPVVTAAVSAGIAIALWYARRWMKTATA*
JGI25153J46596_101453692	3300003215	Arabidopsis Rhizosphere	PRQMTISAFATFIGDVFAHPSHFPPQWAEPLVTAGVSAAIAVALWQARRLIKSL*
Ga0062595_1018907212	3300004479	Soil	QATISAFATFIGDIFAHPSHFPPQWAEPLVTAMVSAAIAVVVWHAQSWAKRYW*
Ga0062594_1022846042	3300005093	Soil	ATISAVATFVGDIFAHPSHFPPQWAEPVVTAAVSAGIAIALWYARRWMKTATA*
Ga0066869_100030823	3300005165	Soil	GDIFAHPSHFPPQWAEPVVTAAVSAGIAIALWYARRWMKTATA*
Ga0068993_100821982	3300005183	Natural And Restored Wetlands	MTISAFATFIGDVFAHASHFPPQWGEPLVTAVVSAVIAVAVWQAKRLVFRSL*
Ga0068999_100621542	3300005205	Natural And Restored Wetlands	LAQMDRTTNSVARQATISAFATFIGDVFAHPSHFPPQWAEPLVTAVVSAGIAIALWHAKRWAKSL*
Ga0066388_1001074533	3300005332	Tropical Forest Soil	VATFIGDIFAHPPHFPPQWAEPLVTAAVAAAIAIAVWYGRRWWKSLSLMPR*
Ga0066388_1032637951	3300005332	Tropical Forest Soil	SATISAIATFIGDIFAHPSHFPPQWAEPTVTAAVAAGIAIVVWYAKRLAKFNPSHG*
Ga0066388_1062234332	3300005332	Tropical Forest Soil	GTAERSIATFLGDVFAHPSHFPPQWAEPTVTAVVSGGIAIAMWYAERWTKSL*
Ga0066388_1076535981	3300005332	Tropical Forest Soil	RQATISAIATFIGDIFAHPSHFPPQWAEPTVTAVVSGGIAIALWHAKRWAKSL*
Ga0070682_1017580421	3300005337	Corn Rhizosphere	VATFVGDIFAHPSHFPPQWAEPVVTAAVSAGIAIALWYARRWMKTATA*
Ga0070674_1009000402	3300005356	Miscanthus Rhizosphere	GDIFAHPSHFPPQWAEPVVTAAVAAGIAIALWYAKRWAKMA*
Ga0070701_101271241	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	FIGDIFAHPSHFPPQWAEPVVTAAVSAGIAIALWYARRWMKTATA*
Ga0070711_1005726421	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	DSVGRQATISAIATFIGDIFAHPSHFPPQWAEPVVTAAVAAGIAIIVWYAKRWAKTSARLGHS*
Ga0070678_1003767971	3300005456	Miscanthus Rhizosphere	ATFIGDIFAHPSHFPPQWAEPVVTAAVAAGIAIALWYAKRWAKMA*
Ga0070702_1005717121	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	IFAHPSHFPPQWAEPVVTAAVAAGIAVAVWYARRWMRTAA*
Ga0070702_1008990871	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	SAVATFVGDIFAHPSHFPPQWAEPTVTAAVSAGIAIALWHAKRWARMSV*
Ga0068864_1020417671	3300005618	Switchgrass Rhizosphere	GDIFAHPSHFPPQWAEPVVTAAVSAGIAIALWYARRWMKTAAA*
Ga0068861_1005056831	3300005719	Switchgrass Rhizosphere	ATISAVATFVGDIFAHPSHFPPQWAEPTVTAAVSAGIASALWHAKRWARMSA*
Ga0066903_1019032883	3300005764	Tropical Forest Soil	AGRQATISAIATFIGDTFAHPSHFPPQWAEPTITAAVSASVAIALWYAKRWAKSL*
Ga0066903_1031641351	3300005764	Tropical Forest Soil	NTVSRQATLSAVVTLIGDVFAHPSHFGPQWAEPLITAAVSAGIAVAVWYAKQWLRPAR*
Ga0070715_101089873	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	ISAIATFIGDVFAHPSHFAPQWAEPTITAVVSGGIAIALWHAKRWAKSL*
Ga0075018_104650202	3300006172	Watersheds	QMDRTTNSLARQVTISSIATFAGDIFAHPSHFPPQWAEPAVTAAVSACIAIALWYAKRWAKSL*
Ga0075367_101928621	3300006178	Populus Endosphere	QMDRTTDSVARQATISAVATFIGDIFAHPSHFPPQWAEPVVTAAVAAAIAIAVWYARRWMKTAAA*
Ga0075367_104124841	3300006178	Populus Endosphere	HFPPQWAEPVVTAAVAAGIAVAVWYARRWMRTAA*
Ga0074056_113857071	3300006574	Soil	VATFIGDIFAHPSHFPPQWAEPVVTAAVSAGIAIALWYARRWMKTATA*
Ga0074054_100122712	3300006579	Soil	FIGDIFAHPSHFPPQWAEPTITAAVSAGIAIALWYAKRWAKSPG*
Ga0074048_133704472	3300006581	Soil	SHFPPQWAEPVVTAAVAAGIAIALWYARRWMKTAAA*
Ga0074060_120124032	3300006604	Soil	FPPQWAEPVVTAAVSAGIAIALWYTRRWMKTAAA*
Ga0074057_100491724	3300006605	Soil	FAHPSHFPPQWAEPVVTAAVAAGIAIALWYARRWMKTAAA*
Ga0074062_130025521	3300006606	Soil	VATFVGDIFAHPSHFPPQWAEPVVTAAVAAGIAIALWYARRWMKTAAA*
Ga0066659_102475913	3300006797	Soil	DSAARQATISAIATFLGDVFAHPSHFPPQWAEPTVTAIVSGGIAIALWHAKRWAKRL*
Ga0075429_1017951851	3300006880	Populus Rhizosphere	ARQATISAIATFLGDVFAHPSHFPPQWAEPTVTAVVSGGIAIAMWHAKRWAKSL*
Ga0105244_103074372	3300009036	Miscanthus Rhizosphere	DSVTRQATISAVATFVGDIFAHPSHFPPQWAEPVVTAAVAAGIALALWYARRWMKTAAA*
Ga0099828_115356872	3300009089	Vadose Zone Soil	LAQMDRTIDSAARQATISAIATFIGDIFAHPSHFPPQWAEPTVTAAVSGGIAIALWYAKRWAKSL*
Ga0111539_117952962	3300009094	Populus Rhizosphere	LQRQMTISAFATFIGDVFAHPSHFPPQWGEPLATAAVSAGIAAALWLGRPLVKNFLKQA*
Ga0105243_126732981	3300009148	Miscanthus Rhizosphere	FAHPSHFPPQWAEPVVTAAVAAGIAVAVWYARRWMRTAA*
Ga0111538_124286411	3300009156	Populus Rhizosphere	RTIDSAARQATISAIATFLGDVFAHPSHFPPQWAEPTVTAVVSGGIAIAMWHAKRWAKSL
Ga0105238_121005702	3300009551	Corn Rhizosphere	ITQMDRTTISLPRQMTISAFATFIGDVFAHPSHFPPQWGEPLVTAGVSAVIAVALWYGRRLLKSL*
Ga0105249_123929921	3300009553	Switchgrass Rhizosphere	TDSVTRQATISAVATFVGDIFAHPSHFPPQWAEPTITAVVSGGIAIALWHAKRWAKSL*
Ga0131092_110939962	3300009870	Activated Sludge	MDRSTDSVTRQATIAAVATFIGDTFAHGAHTPPQWLEPMVTGAVSAAISVAVWHARRWARFA*
Ga0126373_104952911	3300010048	Tropical Forest Soil	ISAIATFIGDVFAHPSHFPPQWAEPTITAAVSGGIAIALWHAKRWAKSL*
Ga0126381_1006516301	3300010376	Tropical Forest Soil	MDRTIDSIARQATISSIATFLGEVFAHPAHFPPQWAEPTVTALVSGGIAITMWYVKRWAKSL*
Ga0134124_110947701	3300010397	Terrestrial Soil	ATISAVATFIGDIFAHPSHFPPQWAEPMVTAVVAAAIAIALWCAKRLVKSV*
Ga0137389_114774572	3300012096	Vadose Zone Soil	TDSVARQATISAIATFIGDIFAHPSHFPPQWAEPVITASVSAGIAIALWYAKRWAKSL*
Ga0137370_101212141	3300012285	Vadose Zone Soil	SVSRQATLSAVVTLIGDVFAHPSHFGPQWAEPLVTAAVSAGIAVALWYVKHWLRPVH*
Ga0157341_10474732	3300012494	Arabidopsis Rhizosphere	AQMDRTIDSAARQATISAMATFIGDVFAHSSHFPPQWAEPTVTAAVSGGIAIALWYAKRWAKSL*
Ga0137398_110514122	3300012683	Vadose Zone Soil	IGDIFAHPSHFPPQWAEPTVTAAVSGGIAIALWYAKRWAKSL*
Ga0137359_111903701	3300012923	Vadose Zone Soil	AIATFIGDTFAHASHFPPQWAEPTITAVVSGGIAIALWHAKRWAKSL*
Ga0126375_101080353	3300012948	Tropical Forest Soil	TIDSAARQAMISAIAAFLGDVFAHPSHFPPQWAEPTVTAVVSGGIAVALWHAKRWAKSL*
Ga0164298_111887412	3300012955	Soil	DIFAHPSHFPPQWAEPVVTAAVAAGIAIALWYARRWMKTAAA*
Ga0164303_104216912	3300012957	Soil	ATISAIATFIGDIFAHPSHFPPQWAEPTVTAAVSGGIAIALWYAKRWAKSL*
Ga0126369_109055392	3300012971	Tropical Forest Soil	VARSATISAVATFIGDIFAHPSHFPPQWAEPLVTAAVSAAIAIAVWYGRRWWKSLGMMPR
Ga0164309_102413551	3300012984	Soil	DSVTRQATISAVATFIGDIFAHPSHFPPQWAEPVVTAAVSAGIAIALWYARRWMKTATA*
Ga0164306_103628431	3300012988	Soil	QATISAIATFIGDIFAHPSHFPPQWAEPTVTAAVSGGIAIALWYAKRWAKSL*
Ga0164305_100311053	3300012989	Soil	MDRTIDSAARQATISAIATFLGDVFAHPSHFPPQWAEPTVTAVVSGGIAIAMWHAKRWAKSL*
Ga0164305_103066053	3300012989	Soil	ATFVGDIFAHPSHFPPQWAEPVVTAAVAAGIAIALWYARRWMKTAAA*
Ga0163162_133730362	3300013306	Switchgrass Rhizosphere	ATFVGDIFAHPSHFPPQWAEPVVTAAVAAGIAIAVWYARRWMTTAAA*
Ga0075359_11240151	3300014266	Natural And Restored Wetlands	TFAHGSHTPPQWAEPLVTAAVSASIAVALWHAKRWWGRVA*
Ga0075352_11258152	3300014324	Natural And Restored Wetlands	TTNSVARQATISAFATFIGDVFAHPSHFPPQWAEPLVTAVVSAGIATALWHAKRWAKSL*
Ga0163163_128032722	3300014325	Switchgrass Rhizosphere	TDNVGRQATISAVVTLIGDVFAHPSHFPPQWAEPLVTAVVSAGIAIALWYAKRWAGVTR*
Ga0157377_109252932	3300014745	Miscanthus Rhizosphere	VQMDRTTDSVSRQATISAVATFVGDIFAHPSHFPPQWAEPTVTAAVSAGIAIALWHAKRWARMSA*
Ga0157379_112325871	3300014968	Switchgrass Rhizosphere	RQVTLSAVVTLIGDVFAHPSHFGPAWAEPLVTAAVSAGIAVAVWYAKQWFRALRTDHLAI
Ga0157376_127946771	3300014969	Miscanthus Rhizosphere	LIGDVFAHPSHFGPAWAEPLVTAAVSAGIAVAVWYAKQWLRALRTDHLGI*
Ga0132258_111173045	3300015371	Arabidopsis Rhizosphere	ARQATISAIATFIGDLFAHPSHFPPQWAEPAVTAAVAAAIAVALWYAKRWARLA*
Ga0182036_109870321	3300016270	Soil	SLARQMTISAVVTFIGDIFAHPSHFPPQWAEPLVTAAVSAAIAVAVWHAKRWAKGI
Ga0182041_114006721	3300016294	Soil	DSAGRQATISAVATFIGDIFAHPSHFPPQWAEPVITAAVSAGFAITLWYAKRFAKSYWVGRQPA
Ga0182033_100105071	3300016319	Soil	TDSAGRLATISAVATFSGDIFAHPSHFPPQWAEPVITAAVSAGFAIALWYAKRFAKSYWAGRQPA
Ga0182034_105917602	3300016371	Soil	TDSAGRQATISAVATFIGDIFAHPSHFPPQWAEPVITAAVSAGFAIALWYAKRFAKSYWVGRQPA
Ga0182039_108199292	3300016422	Soil	VSRQATLSAVVTLIGDVFAHPSHFGPQWAEPLITTAVSAGIAVAVWYAKPWLRPVP
Ga0182039_116340662	3300016422	Soil	ALLAQMDRTIDSAARQATISAIATFIGDIFAHPSHFPPQWAEPTVTAVVSGGIAIALWHAKRWAKSL
Ga0187785_107253531	3300017947	Tropical Peatland	STFAGDIFAHPSHFPPQWAEPSVTAAVSACIAIALWYAKSWIRKL
Ga0190274_120551571	3300018476	Soil	SAVATFVGDIFAHPSHFPPQWAEPVVTAAVAAGIAIALWYARRWMKTAAA
Ga0173482_104194311	3300019361	Soil	TDSVSRQATISAVATFVGDIFAHPSHFPPQWAEPTVTAAVSAGIAIALWHAKRWARTSA
Ga0193703_10220381	3300019876	Soil	SVARQATISAVATFIGDIFAHPSHFPPQWAEPVVTAAVAAGIAIAVWYAKRWMKTAAA
Ga0210401_103079834	3300020583	Soil	MDRTTNSVGRQATIAAVVTLIGDVFAHPSHFPPQWAEPLVTAAVSAGIAVALWYGKRWTG
Ga0210406_107986141	3300021168	Soil	AARQATISAIATFLGDVFAHPSHFPPQWAEPTVTAVVSGGIAIAMWHAKRWAKSL
Ga0210405_113280901	3300021171	Soil	VTLIGDVFAHPSHFPPQWAEPLVTAAVSAGIAVALWYAKRWAGFAS
Ga0210396_102277782	3300021180	Soil	MDRTTNSVGRQATIAAVVTLIGDVFAHPSHFPPQWAEPLVTAAVSAGIAVALWYGKRWTGFAY
Ga0210389_108294612	3300021404	Soil	GDVFAHPSHFPPQWAEPLVTAAVSAGIAVALWYAKRWAGFAS
Ga0210410_116458722	3300021479	Soil	GRQATIVAVVTLIGDVFAHPSHFPPQWAEPLVTAAVSAGIAVALWYGKRWTGFAY
Ga0222621_10289732	3300021510	Groundwater Sediment	ATFVGDIFAHPSHFPPQWAEPTITAAVSAGIAIALWYAKRWAKSSS
Ga0210409_116991881	3300021559	Soil	ANSVSRQVTLSAVVTLIGDVFAHPSHFGPQWAEPLVTAAVSAGFAVALWYTRQWLRLVH
Ga0193698_10553612	3300021968	Soil	QATISAVATFIGDIFAHPSHFPPQWAEPVVTAAVAAGIAIAVWYAKRWMKTAAA
Ga0207663_102303163	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	AIATFIGDVFAHPSHFAPQWAEPTITAVVSGGIAIALWHAKRWAKSL
Ga0207662_108606272	3300025918	Switchgrass Rhizosphere	VSRQATISAVATFVGDIFAHPSHFPPQWAEPTVTAAVSAGIAIALWHAKRWARMSA
Ga0207662_111049741	3300025918	Switchgrass Rhizosphere	LSAVVTLIGDVFAHSSHFGAAWAEPLVTAAVSASIAVAVWYAKQWFRALRTDHLAI
Ga0207657_104278863	3300025919	Corn Rhizosphere	ATFVGDIFAHPSHFPPQWAEPVVTAAVSAGIAIALWYARRWMKTATA
Ga0207681_115741731	3300025923	Switchgrass Rhizosphere	TDSVTRQATISAVATFVGDIFAHPSHFPPQWAEPVVTAAVSAGIAIALWYARRWMKTATA
Ga0207694_112255392	3300025924	Corn Rhizosphere	MRYDPSHFPPQWAEPVVTAAVSAGIAIALWYARRWMKTATA
Ga0207700_107557481	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	SAIATFIGDIFAHPSHFPPQWAEPVVTAAVAAGIAIIVWYAKRWAKTSARLGHS
Ga0207661_101176281	3300025944	Corn Rhizosphere	VATFVGDIFAHPSHFPPQWAEPVVTAAVSAGIAIALWYARRWMKTATA
Ga0207679_101960143	3300025945	Corn Rhizosphere	RTTDSVTRQATISAVATFVGDIFAHPSHFPPQWAEPVVTAAVAAGIAIAVWYARRWMKTAAA
Ga0210145_10281581	3300025973	Natural And Restored Wetlands	QATISAFATFIGDVFAHPSHFPPQWAEPLVTAVVSAGIAIALWHAKRWAKSL
Ga0207658_114973711	3300025986	Switchgrass Rhizosphere	LFICHRQARKPLGRQATISAVVTLIGDVFAHPSHFPPQWAEPLVTAVVSAGIAIALWYAKRWAGVTR
Ga0207641_101139061	3300026088	Switchgrass Rhizosphere	RQATISAVATFVGDIFAHPSHFPPQWAEPVVTAAVSAGIAIALWYARRWMKTATA
Ga0207683_115560771	3300026121	Miscanthus Rhizosphere	SLSRQMTISAFATFIGDVFAHPSHFPPQWGEPLVTAGVSAVIAVALWQARRLLKSL
Ga0257168_10158392	3300026514	Soil	AQMDRTIDSAARQATISAIATFIGDIFAHPSHFPPQWAEPTVTAAVSGGIAIALWYAKRWAKSL
Ga0179587_101922931	3300026557	Vadose Zone Soil	TVAHSITSSAATISAIATFLGDVFAHPSHFPPQWAEPTVTAVVSGGIAIALWYAKRWAKS
Ga0207764_1108321	3300026839	Tropical Forest Soil	AHPSHFPPQWAEPVITAAVSAGIAIALWHVKRWTKSL
Ga0209325_10075113	3300027050	Forest Soil	IATFIGDVFAHPSHFAPQWAEPTITAVVSGGIAIALWHAKRWAKSL
Ga0208525_10003844	3300027288	Soil	MDRTTNSLARQVTISSIATFAGDIFAHPSHFPPQWAEPVVTAAVSAGIAIALWYARRWMKTATA
Ga0209523_11344172	3300027548	Forest Soil	IATFIGDIFAHPSHFPPQWAEPTVTAAVSGGIAIALWYAKRWAKSL
Ga0207981_10050461	3300027560	Soil	TFVGDIFAHPSHFPPQWAEPVVTAAVSAGIAIALWYARRWMKTATA
Ga0207826_10362793	3300027680	Tropical Forest Soil	VGRQATISAIATFIGDIFAHPSHFPPQWAEPLVTAAISASIAVALWYAKRLVKKPQPG
Ga0209813_103256712	3300027866	Populus Endosphere	ATISAVATFIGDIFAHPSHFPPQWAEPLVTAAVAAGIAIAVWYARRWMKTAAA
Ga0209380_106339521	3300027889	Soil	ATIAAVVTLIGDVFAHPSHFPPQWAEPLVTAAVSAGIAVALWYGKRWTGFAY
Ga0207428_113031392	3300027907	Populus Rhizosphere	ISAFATFIGDVFAHPSHFPPQWGEPLATAAVSAGIAAALWLGRPLVKNFLKQA
Ga0265357_10323932	3300028023	Rhizosphere	DRTRNSVARQATIAAVVTLIGDVFAHPSHFPPQWAEPLVTAAVSAGIAVALWYAKRWAGFAS
Ga0247820_111448001	3300028597	Soil	ARQATISAVATFVGDIFAHPSHFPPQWAEPVVTAAVAAGIAIALWYARRWMKTAAA
Ga0247819_102667472	3300028608	Soil	ISAVATFIGDIFAHPSHFPPQWAEPVVTAAVAAGIAIALWYARRWMKTAAA
Ga0307279_101232751	3300028709	Soil	FIGDIFAHPSHFPPQWAEPVVTAAVSAGIAIALWYARRWMKTAAA
Ga0307303_101612772	3300028713	Soil	GDIFAHPSHFPPQWAEPTITAAVSASIAIALWYAKRWAKSSG
Ga0307298_100378272	3300028717	Soil	VQMDRTTDSVGRQATISAVATFVGDIFAHPSHFPPQWAEPTITAAVSAGIAIALWYAKRWAKSSG
Ga0247825_106485922	3300028812	Soil	ATISAVATFIGDIFAHPSHFPPQWAEPVVTAAVAAGIAIALWYARRWMKTAAA
Ga0307289_100547891	3300028875	Soil	VGRQATISAVATFVGDIFAHPSHFPPQWAEPTITAAVSASIAIALWYAKRWAKSSG
Ga0307500_101459471	3300031198	Soil	VTRQATISAVATFIGDIFAHPSHFPPQWAEPVVTAAVSAGIAIALWYARRWMKTATA
Ga0307497_100160881	3300031226	Soil	RTTDSVARQATISAVATFIGDIFAHPSHFPPQWAEPVVTAAVAAGIAIALWYARRWMKTAAA
Ga0318528_106600451	3300031561	Soil	SVDSVARQATISAICTFVGDVFAHPSHFPPQWAEPVVTAAVSAAIAVAVWHARRWAWTKL
Ga0318528_106763651	3300031561	Soil	GRQATISAVATFIGDIFAHPSHFPPQWAEPVITAAVSAGFAITLWYAKRFAKSYWVGRQP
Ga0310915_100603681	3300031573	Soil	TISAIATFIGDIFAHPSHFPPQWAEPTVTAVVSGGIAIALWHAKRWAKSL
Ga0310915_108556561	3300031573	Soil	AVVTLIGDVFAHPSHFGPQWLEPVVTAAVAAGFAVALWYAKQWLRVVR
Ga0310915_112839451	3300031573	Soil	IATFIGDIFAHPSHFPPQWAEPTVTAVVSGGIAIALWHAKRWAKSL
Ga0318572_105904421	3300031681	Soil	FAHPSHFPPQWAEPTITAAVSASIAIALWYAKRWAKSL
Ga0318560_104880861	3300031682	Soil	AHPSHFPPQWAEPTITAAVSASIAIALWYAKRWAKSL
Ga0306918_109370151	3300031744	Soil	SRQATLSAVVTLIGDVFAHPSHFGPQWAEPLTTAAVSAGIAVAVWYAKQWLRAVP
Ga0306918_113850701	3300031744	Soil	QATLSAVVTLIGDVFAHPSHFGPAWAEPLATAAVSAGIAVALWYAKQWLRLVH
Ga0318494_106463201	3300031751	Soil	DSAVRQATISAIATFIGDIFAHPSHFPPQWAEPTVTAVVSGGIAIALWHAKRWAKSL
Ga0318568_104419972	3300031819	Soil	VATFIGDIFAHPSHFPPQWAEPVITAAVSAGFAIALWYAKRFAKSYWVGRQPA
Ga0306923_108917761	3300031910	Soil	AARQATISAIATFIGDIFAHPSHFAPQWAEPTVTAVVSGGIAIALWYAKRWAKSL
Ga0306923_111321251	3300031910	Soil	SAIATFIGDIFAHPSHFPPQWAEPTVTAAVSGGIAIALWYAKRWAKSL
Ga0310916_100712681	3300031942	Soil	LAQMDRTIDSAARQATISAIATFIGDIFAHPSHFPPQWAEPTVTAVVSGGIAIALWHAKRWAKSL
Ga0310916_103582312	3300031942	Soil	IATFIGDIFAHPSHFPPQWAEPTVTAVVSGGIAIALWHAKRWTKSL
Ga0310913_104335721	3300031945	Soil	VGDSLARQATISAVVTFIGDVFAHPSHFGPQWAEPLITAAVSAAIAVAVWHAKRLVKRLAAPELG
Ga0310909_110874601	3300031947	Soil	LSRQVTISAIATFMGDIFAHPSHFPPQWAEPLVTAAVSAAIAVAVWHAKRWVKSP
Ga0307479_112532652	3300031962	Hardwood Forest Soil	NSVSRQATISAVVTLIGDVFAHPSHFPPQWAEPLVTAAVSAGIAVALWYGKRWAGFAY
Ga0310906_103725321	3300032013	Soil	VGDIFAHPSHFPPQWAEPVVTAAVSAGIAIALWYARRWMKTATA
Ga0310911_108896571	3300032035	Soil	FIGDVFAHPSHFPPQWAEPLVTAAVSAGIAVALWYAKRWARLAY
Ga0318532_100298631	3300032051	Soil	GDIFAHPSHFPPQWAEPVITAAVSAGFAIALWYAKRFAKSYWVGRQPA
Ga0318533_102987672	3300032059	Soil	QVTLSAVVTLIGDVFAHPSHFGPQWLEPVVTAAVAAGFAVALWYAKQWLRVVR
Ga0318533_114148171	3300032059	Soil	QMDRTIDSAARQATISAIATFIGDIFAHPSHFAPQWAEPTVTAVVSGGIAIALWYAKRWAKSL
Ga0318505_105612111	3300032060	Soil	AQMDRTIDSAVRQATISAIATFIGDIFAHPSHFPPQWAEPTVTAVVSGGIAIALWHAKRWAKSL
Ga0306924_120438881	3300032076	Soil	VTLIGDVFAHPSHFGPAWAEPLATAAVSAGIAVAFWYAKQWLRLVH
Ga0318518_103530043	3300032090	Soil	VTISAIATFMGDIFAHPSHFPPQWAEPLVTAAVSAAIAVAVWHAKRWVKSP
Ga0307470_106238652	3300032174	Hardwood Forest Soil	ATFIGDIFAHPSHFPPQWAEPVVTAAVSAGIAIALWYARRWMKTAAA
Ga0306920_1015057901	3300032261	Soil	AARQATISAIATFIGDIFAHPSHFPPQWAEPTVTAVVSGGIAIALWHAKRWAKSL
Ga0306920_1027357681	3300032261	Soil	QMDRATNSVGRQATLSAVVTLIGDVFAHPSHFGPPWAEPLITAAVSASIAVAVWYGKQWLRTVS
Ga0310812_104256371	3300032421	Soil	VALLAQMDRTTNSLSRQMTISAFATFIGDVFAHPSHFPPQWGEPLVTAVVSAVIAVAVWQAKRLVFRNL
Ga0335084_104480061	3300033004	Soil	MDRTTNSLSRQMTISAFATFIGDVFAHPSHFPPQWSEPLVTAVVSAVIAVAVWHAKRLVFRSL
Ga0335073_112774511	3300033134	Soil	IGDVFAHPSHFGPQWAEPVVTAAVSAGLAVAWWYVKRRMGFART
Ga0310810_101602723	3300033412	Soil	TISAVATFVGDIFAHPSHFPPQWAEPTVTAAVSAGIAIALWHAKRWARMSA

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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