Metagenome / Metatranscriptome Family F043115

Overview

Basic Information

• Family ID: F043115
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 157
• Average Sequence Length: 42 residues
• Representative Sequence: MATHAAATRNISGLARALAQHGLMTEYEAETLQTQAQQAG
• Number of Associated Samples: 141
• Number of Associated Scaffolds: 157

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 28.03 %
• % of genes near scaffold ends (potentially truncated): 99.36 %
• % of genes from short scaffolds (< 2000 bps): 92.99 %
• Associated GOLD sequencing projects: 133
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (82.166 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen (6.369 % of family members)
• Environment Ontology (ENVO): Unclassified (43.312 % of family members)
• Earth Microbiome Project Ontology (EMPO): Host-associated → Plant → Plant rhizosphere (42.675 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 48.53%
  β-sheet: 0.00%
  Coil/Unstructured: 51.47%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 157 Family Scaffolds
PF03471	CorC_HlyC	90.45
PF01578	Cytochrom_C_asm	2.55
PF13519	VWA_2	0.64
PF00886	Ribosomal_S16	0.64
PF02978	SRP_SPB	0.64
PF00521	DNA_topoisoIV	0.64

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 157 Family Scaffolds
COG0188	DNA gyrase/topoisomerase IV, subunit A	Replication, recombination and repair [L]	0.64
COG0228	Ribosomal protein S16	Translation, ribosomal structure and biogenesis [J]	0.64
COG0541	Signal recognition particle GTPase	Intracellular trafficking, secretion, and vesicular transport [U]	0.64

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	82.17 %
Unclassified	root	N/A	17.83 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	82.17 %
Unclassified	root	N/A	17.83 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	82.17 %
Unclassified	root	N/A	17.83 %

Level 4

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	80.25 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.64 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.64 %
Unclassified	root	N/A	17.83 %

Level 5

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.64 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	78.34 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.64 %
Unclassified	root	N/A	17.83 %

Level 6

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.64 %
Neisseriales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales	1.91 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	5.10 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.64 %
Unclassified	root	N/A	17.83 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	45.86 %

Level 7

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.64 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	45.86 %
Chromobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Chromobacteriaceae	1.91 %
Isosphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales	0.64 %
Nitrosomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae	0.64 %
Unclassified	root	N/A	17.83 %

Level 8

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.64 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	45.86 %
Chromobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Chromobacteriaceae	1.91 %
Isosphaeraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	0.64 %
Nitrosomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae	0.64 %
Unclassified	root	N/A	17.83 %

Level 9

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.64 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	45.86 %
Chromobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Chromobacteriaceae	1.91 %
Nitrosomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae	0.64 %
Singulisphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera	0.64 %
Unclassified	root	N/A	17.83 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300000854|WSSedB2T2DRAFT_1021266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	635
3300001213|JGIcombinedJ13530_103533113	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	645
3300001213|JGIcombinedJ13530_107614149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	605
3300004463|Ga0063356_104327080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	611
3300004782|Ga0062382_10556859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	557
3300005181|Ga0066678_10279927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1086
3300005181|Ga0066678_10930841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	567
3300005290|Ga0065712_10209261	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1079
3300005330|Ga0070690_100340446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1086
3300005331|Ga0070670_100065524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3117

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	69.43%
Host-Associated	Host-Associated	30.57%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	14.65%
Plants	Host-Associated → Plants	30.57%
Terrestrial	Environmental → Terrestrial	54.78%

Category

Habitat	Taxonomy	Distribution
Floodplain	Environmental → Terrestrial → Floodplain	1.27%
Freshwater	Environmental → Aquatic → Freshwater	8.28%
Marine	Environmental → Aquatic → Marine	3.18%
Peat	Environmental → Terrestrial → Peat	7.01%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere	19.75%
Sediment	Environmental → Aquatic → Sediment	3.18%
Soil	Environmental → Terrestrial → Soil	46.50%

Type

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.28%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.64%
Lake	Environmental → Aquatic → Freshwater → Lake	3.82%
Loam	Environmental → Terrestrial → Soil → Loam	8.92%
Sand	Environmental → Terrestrial → Soil → Sand	0.64%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.91%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.27%
Sediment	Environmental → Aquatic → Marine → Sediment	0.64%
Soil	Host-Associated → Plants → Rhizosphere → Soil	12.10%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.64%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	26.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.64%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	7.01%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.18%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.91%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.19%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.55%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.91%

Subtype

Habitat	Taxonomy	Distribution
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.27%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.64%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.27%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.82%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.64%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	3.82%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	2.55%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	12.10%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.64%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	7.01%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.18%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.91%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.91%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.27%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.64%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	0.64%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.64%

Habitat

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.27%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.27%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.27%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.55%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.55%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.27%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.82%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	6.37%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.64%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.64%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.64%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.64%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.27%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.64%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	0.64%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.64%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.64%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.64%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.64%
Mangrove Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Mangrove Sediment	0.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.18%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.64%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.27%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.64%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.64%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.64%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.64%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.64%
Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Sand	0.64%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	3.82%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.27%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	0.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.10%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.27%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.64%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.64%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	5.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.46%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.55%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.27%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.64%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.27%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.64%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.64%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.27%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.64%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.18%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.64%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	2.55%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	0.64%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	1.27%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300000854	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site B2 Tule	Environmental
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated
3300004782	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh	Environmental
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
WSSedB2T2DRAFT_10212661	3300000854	Wetland	MATHAASTRNISGLARALAQHGLMSEQEAENQQQAAHQAGVTFVEKILE
JGIcombinedJ13530_1035331132	3300001213	Wetland	MATHAATTRNISGLARAMAQHGVMTEYEAETLHNQAQLAGVTFVEQ
JGIcombinedJ13530_1076141491	3300001213	Wetland	MATHAATTRNISGLARAMAQHGLMSEYDAEALQSQA
Ga0063356_1043270801	3300004463	Arabidopsis Thaliana Rhizosphere	MATHAASTRNISGLARALAQHGLMTEYEAETLQTQAAQAGVSFVDHVL
Ga0062382_105568592	3300004782	Wetland Sediment	MATHAASTRNISGLARALAQHGLMTEYEAETLQTQAQQAGATFVDHVLAGKRIT
Ga0066678_102799271	3300005181	Soil	MATHAATRTISGLARAMVQHGLLSEYDAETLQGQAQAANIGFVEQML
Ga0066678_109308411	3300005181	Soil	MATKAAVPSISGLARAMVQHGLLSEYDAETLQGQAQTASIGFVEQ
Ga0065712_102092612	3300005290	Miscanthus Rhizosphere	MATQAATRNISGLARAMVQQGLLSEYDADALHTQAKAANLGFVEQVLL
Ga0070690_1003404462	3300005330	Switchgrass Rhizosphere	MATHAASTRNISGLARALAQHGLMTEFEAEALQTQAQQAGTTFV
Ga0070670_1000655241	3300005331	Switchgrass Rhizosphere	MATQAAVRNISGLARAMVQQGLLSEFDADALQTQAKAANLGFVEQVLVSKRMTA
Ga0070670_1016069591	3300005331	Switchgrass Rhizosphere	MATHAATASRNISGLARALAQSGLMSEYEAEALQTQAQSA
Ga0070682_1019575332	3300005337	Corn Rhizosphere	MATQAAVRNISGLARAMVQQGLLSEFDADALQTQAKAASLGFVEQVLVSKRMTAQ
Ga0070674_1012444562	3300005356	Miscanthus Rhizosphere	MATHAASTRNITGLARALAQHGLMTEFEAEALQTQAQQAGVPFVDHVIT
Ga0070673_1005052532	3300005364	Switchgrass Rhizosphere	MATHVAATRNISGLARALAQHGVMSEHEAEAMQTQAQSSGV
Ga0070710_106603352	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MATNAAARTISGLARAMVQHGLLSEYDAETLQSQAQAASIGFVEQ
Ga0070681_113396881	3300005458	Corn Rhizosphere	MATHAATRNISGLARALAQHGVMSEAEAEALQVQSQSSGIPF
Ga0068853_1022046131	3300005539	Corn Rhizosphere	MATHAATRNISGLARALAQSGLMSEYEAETLQTQAQAAGISFV
Ga0070672_1007507551	3300005543	Miscanthus Rhizosphere	MATQAAVRNISGLARAMVQQGLLSEFDADALQTQAKAANL
Ga0070672_1007792121	3300005543	Miscanthus Rhizosphere	MATHAAATRNISGLARALAQHGVMSEYEAEAMQTQAQSAGV
Ga0070664_1016524052	3300005564	Corn Rhizosphere	MATHAATRNISGLARALAQHGVMSEHEAEAMQAQAQTAGVA
Ga0066705_109367561	3300005569	Soil	MATHAATRNLSGLARALAQHGVMSEHEAEAMQTQAQS
Ga0068854_1001448013	3300005578	Corn Rhizosphere	MATHAATRNISGLARALAQSGLMTEYEAESLQTQAQVAGISFVE
Ga0070702_1003415751	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MATHAATRNISGLARALAQHGVMSEHEAEALQTQAQTSGASFVE
Ga0070702_1013747152	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MATHAATRNISGLARALAQHGVMSEAEAEALQVQSQSSGIPFVEQV
Ga0068864_1002814582	3300005618	Switchgrass Rhizosphere	MATHAATRNISGLARALAQSGLMSEFEAETLQTQAQQ
Ga0068861_1010080682	3300005719	Switchgrass Rhizosphere	MATHAATRNISGLARALAQSGLMSEYEAEALQTQAQT
Ga0066903_1025669592	3300005764	Tropical Forest Soil	MATTAATRNISGLARAMVQHGLLSENDAEALQTQAQATNIGFV
Ga0075286_10547062	3300005886	Rice Paddy Soil	MATHAAATRNISGLARALAQHGVMSESEAEALQLQSQSSGVPF
Ga0066790_100771662	3300005995	Soil	MATKAAAQNLSGLARAMVQHGLLSEYDAETLQGQAQTANIGFVE
Ga0066652_1016007191	3300006046	Soil	MATHAATRTISGLARAMVQHGLLSEYEAESLQGQAQAASIGFVEQMLL
Ga0070715_103579021	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MATHAATRNISGLARALAQHGVMSEHEAEALQTQAQTSGASFVETV
Ga0079037_1022216132	3300006224	Freshwater Wetlands	MATHAASTRNISGLARALAQHGLMTEFEAEALQTQ
Ga0074059_115359691	3300006578	Soil	MATHAATRNISGLARALAQHGVMSEYEAETLQTQAQ
Ga0074054_118336152	3300006579	Soil	MATHAATRNISGLARALAQHGVMSEYEAETLQTQAQSTGASFV
Ga0074060_115576201	3300006604	Soil	MATHAATRNISGLARALAQHGIMSEYEAETLQTQAQS
Ga0079220_119448811	3300006806	Agricultural Soil	MATTAAARTISGLARAMVQHGLLSEYDAEAMQSQAQ
Ga0074063_102009311	3300006953	Soil	MATTAAPRTISGLARAMVQHGLLSEYDADALQTQAQAASIGFVEQVL
Ga0075435_1016854071	3300007076	Populus Rhizosphere	MATHAASTRNISGLARALAQHGLMTEYEAETLQTQAAQAGVSFVDHVLAGKR
Ga0066709_1037838632	3300009137	Grasslands Soil	MATHAASTRNITGLARALAQHGLMTEFEAEALQTQAQQAGVPFVD
Ga0105248_132553722	3300009177	Switchgrass Rhizosphere	MATHAASTRNLSGLARALAQHGLMTEFEAEALQTQAAQAGVTFVDH
Ga0123573_104228112	3300009509	Mangrove Sediment	MATPVTTPKISGLARALAQHGLLTENEAHGLQTQAATAGINFAEQIVL
Ga0114942_13679911	3300009527	Groundwater	MVTHEITRNISGLARALAQQGLVTEAEAEALQTQAQTAGVSF
Ga0134065_105012782	3300010326	Grasslands Soil	MATHVATRNISGLARALAQHGVMSEHEAEGMQSQAQSAGVTFVE
Ga0134121_118274381	3300010401	Terrestrial Soil	MATHAASTRNITGLARALAQHGLMTEFEAEALQTQAQQAGVPFVDHVITGKKIT
Ga0134121_132633981	3300010401	Terrestrial Soil	MATHAATRTISGLARAMVQHGLLSEYEAESLQSQAQAASIGF
Ga0151489_17335001	3300011106	Soil	MATHAASSRNISGLARALAQHRLMTEFEAETLQTQAA
Ga0137382_109532802	3300012200	Vadose Zone Soil	MATHAATRTISGLARAMVQHGLLSEYDAETLQGQA
Ga0137362_113563221	3300012205	Vadose Zone Soil	MATNAAVRTISGLARAMVQHGLLSEYDADTMQSQAQAASIGFVE
Ga0137367_112215722	3300012353	Vadose Zone Soil	MATHAATRTISGLARAMVQHGLLSEYDAETLQSQAQAAN
Ga0137371_113126191	3300012356	Vadose Zone Soil	MLLKMATKAATQNISGLARAMVQHGLLSEYDAETLQ
Ga0164298_102129241	3300012955	Soil	MATQAAVRNISGLARAMVQQGLLSEFDADALHTQAKAANLGFVEQVLVSKRMTASQ
Ga0126369_117519712	3300012971	Tropical Forest Soil	MATNAAPRTISGLARAMVQHGLVSEYDAETIQSQA*
Ga0157371_115395261	3300013102	Corn Rhizosphere	MATHAATRNLSGLARAFAQHGLLPESEADSLQTQAQSAGITFVEQVL
Ga0157370_102980431	3300013104	Corn Rhizosphere	MATHATTRNISGLARALASAGVMSEYDAEAMQLQSQQAGIT
Ga0157374_101274001	3300013296	Miscanthus Rhizosphere	MATQAAVRNISGLARAMVQQGLLSEFDADALQTQAKAANLGFVEQV
Ga0157374_123370011	3300013296	Miscanthus Rhizosphere	MATHAATRNISGLARALAQSGMMSDYEAETLQTQAQSANISF
Ga0163162_102763493	3300013306	Switchgrass Rhizosphere	MATHAATRNISGLARALAQHGVMSEHDAELLQSQAQTSNVTFV
Ga0157372_122313202	3300013307	Corn Rhizosphere	MATHVAATRNISGLARALAQHGVMSESEAEALQQQSQSSNV
Ga0075348_10137322	3300014319	Natural And Restored Wetlands	MATHAASTRDISGLARALAQHGLMTEFEAEALQTQAQQVGATFVEH
Ga0075352_13000031	3300014324	Natural And Restored Wetlands	MATHAASTRNISGLARALAQHGLMTEYEAETLQTQAQQ
Ga0157379_113033592	3300014968	Switchgrass Rhizosphere	MVSHEITRTISGLARALAQQGLMTESDAEALQSQAQTAGVSFVE
Ga0157376_102918991	3300014969	Miscanthus Rhizosphere	MATQAAVRNISGLARAMVQQGLLSEFDADALQTQAKAANLGFVEQVL
Ga0167651_10994711	3300015190	Glacier Forefield Soil	MATKAATQNLSGLARAMVQHGLLSEYDAETLQGQAQTGNIGFVE
Ga0180077_11114392	3300015255	Soil	MATHAATRNLSGLAHALAQQGVVSENDAAAIQSQAAQSSISFVEQLL
Ga0132258_107865561	3300015371	Arabidopsis Rhizosphere	MATHAAATRNLSGLARALAQHGMMTEYDAETLQTQAQQANVSF
Ga0132255_1055491132	3300015374	Arabidopsis Rhizosphere	MATHVAATRNISGLARALAQHGVMAESEAEALQQQS
Ga0187779_101924942	3300017959	Tropical Peatland	VATATTAVSRTVSGLARAMVQQGLLSEHDADALQGQAQ
Ga0187765_107794501	3300018060	Tropical Peatland	MATHVASTRNISGLARALAQHGLMTEYEAETLQTQAQQAGVSFVDHDAFGS
Ga0184618_105043511	3300018071	Groundwater Sediment	MLLTMATKAATQNISGLARAMVQHGLLSEYDAETLQG
Ga0190274_127304502	3300018476	Soil	MATHAATRNISGLARALAQHGVMSEAEAEAIQVQSQ
Ga0190273_119590311	3300018920	Soil	MATHAATRNLSGLARALAQQGLVTEGDADAIQSQAAQSGMTFVEQLLQNKR
Ga0193731_11126822	3300020001	Soil	MATKAATQNISGLARAMVQHGLLSEYDAETLQGQAQTASI
Ga0193735_10897671	3300020006	Soil	MLLTMATKAATQNISGLARAMVQHGLLSEYDAETLQ
Ga0193733_10767692	3300020022	Soil	MATKAATQNISGLARAMVQHGLLSEYDAETLQGQA
Ga0210382_104377522	3300021080	Groundwater Sediment	MATHAATRTISGLARAMVQHGLLSEYDAEALQSQAQA
Ga0210397_115474601	3300021403	Soil	MATHATTRNISGLARALAQAGVMSEFDAEAMQLQSQQAGIT
Ga0210384_105102072	3300021432	Soil	MATKAAVPSISGLARAMVQHGLLSEYDAETLQGQAQTASIGF
Ga0182009_101356612	3300021445	Soil	MATHAATTRNISGLARALAQHGLMSEGDAEAAQAQART
Ga0224510_100109156	3300022309	Sediment	MATHAAQRNLSGLARALAQQGLVSEADADAIQSQAV
Ga0222622_103786092	3300022756	Groundwater Sediment	MATHAATRNISGLARALAQHGVMSEHDAEALQSQAQ
Ga0247793_10282001	3300023066	Soil	MATHAATRNLSGLARAFAQHGLMPESEADSFQTQAQSAGIT
Ga0207682_104537641	3300025893	Miscanthus Rhizosphere	MATHAATRNISGLARALAQHGVMSEAEAEAIQVQS
Ga0207699_101971602	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MATQAATRNISGLARAMVQQGLLSEYDADALHTQAKA
Ga0207699_109618752	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MATHAAATRNISGLARALAQNGVMSEYEAEAMQTQA
Ga0207660_105560381	3300025917	Corn Rhizosphere	MATHAATRNISGLARALAQHGVMSESEAEALQVQSQS
Ga0207662_100627583	3300025918	Switchgrass Rhizosphere	MATHAATRNISGLARALAQSGLMTEYEAESLQTQAQVAGISF
Ga0207652_107803242	3300025921	Corn Rhizosphere	MATHAATRNISGLARALAQHGVMSESEAEALQVQDR
Ga0207650_100302921	3300025925	Switchgrass Rhizosphere	MATHAASTRNLSGLARALAQHGLMTEFEAEALQTQAAQAGA
Ga0207691_101105843	3300025940	Miscanthus Rhizosphere	MATHAASTRNLSGLARALAQHGLMTEFEAEALQTQA
Ga0207711_112754172	3300025941	Switchgrass Rhizosphere	MATHAASTRNISGLARALAQHGLMTEFEAEALQTQAQQAGTTFVDHV
Ga0207711_116278822	3300025941	Switchgrass Rhizosphere	MATHAATRNISGLARALAQSGLMSEYEAEALQTQAQTAGVSF
Ga0207679_101555623	3300025945	Corn Rhizosphere	MATHAATRNLSGLARALAQHGVMSEHEAEALQTQAQSSGVTF
Ga0207679_105783841	3300025945	Corn Rhizosphere	MATHATATRNISGLARALAQHGVMSEYEAEAMQTQAQSSGV
Ga0207651_121557641	3300025960	Switchgrass Rhizosphere	MATHAASTRNITGLARALAQHGLMTEFEAEALQTQAQQAGVPFVDHVITGKKITAT
Ga0207712_112113731	3300025961	Switchgrass Rhizosphere	MATHAATRNISGLARALAQHGVMSEHEAEALQTQAQTSGA
Ga0207668_110187922	3300025972	Switchgrass Rhizosphere	MATHAATRNISGLARALAQHGVMSEAEAEALQTQSQSSGVP
Ga0207658_119197912	3300025986	Switchgrass Rhizosphere	MATHAATRNISGLARALAQSGMMSDYEAETLQTQAQSANISFVEQ
Ga0207658_120708672	3300025986	Switchgrass Rhizosphere	MATHAATRNISGLARALAQHGVMSEAEAEALQTQSQSSGVPFVEQV
Ga0207677_106596672	3300026023	Miscanthus Rhizosphere	MATHAASTRNLSGLARALAQHGLMTEFEAEALQTQAAQAGV
Ga0207678_104162123	3300026067	Corn Rhizosphere	MATHAASTRNISGLARALAQHGLMTEFEAEALQTQAQQAGT
Ga0207641_100937414	3300026088	Switchgrass Rhizosphere	MATHAATRNISGLARALAQSGLMSEFEAETLQTQAQSA
Ga0207641_116377742	3300026088	Switchgrass Rhizosphere	MATHAASTRNITGLARALAQHGLMTEFEAEALQTQAQQAGVPFVDHVITGK
Ga0207675_1011590822	3300026118	Switchgrass Rhizosphere	MATHAATRNISGLARALAQSGLMSEYEAEALQTQAQ
Ga0207683_105586771	3300026121	Miscanthus Rhizosphere	MATHAAATRNISGLARALAQHGLMTEYEAETLQTQAQ
Ga0209239_10471633	3300026310	Grasslands Soil	MATKAAVPSISGLARAMVQHGLLSEYDAETLQGQAQT
Ga0209864_10212441	3300027547	Sand	MATHAASTRNISGLARALAQHGLMTEFEAEALQTQAQQVGATFVDHV
Ga0209983_10786681	3300027665	Arabidopsis Thaliana Rhizosphere	MATHAATRNLSGLARALAQHGLMPEVEADSFQTQAASAGI
Ga0209392_10251283	3300027683	Freshwater Sediment	MATHAAQRNLSGLARALAQQGLVSEADADAIQSQA
Ga0208989_100451743	3300027738	Forest Soil	MATKAAVSSVSGLARAMVQHGLLSEYDAETFQGQAQTASIGFVEQL
Ga0209073_104133101	3300027765	Agricultural Soil	MATTAAARTISGLARAMVQHGLLSEYDAEAMQSQAQSANIGF
Ga0209797_102605261	3300027831	Wetland Sediment	MATHAASTRNISGLARALAQHGLMTEYEAETLQTQAQQAGASFVDHVLA
Ga0209580_100319631	3300027842	Surface Soil	MMATHAATRNISGLARALAQHGVMSEQEAEALQVQSQ
Ga0209397_106338202	3300027871	Wetland	MATHAASTRNLSGLARALAQHGLLSEYDAEALQSQAQSAG
Ga0209590_110137381	3300027882	Vadose Zone Soil	MATHAATRTISGLARAMVQHGLLSEYDAETLQGQAQAANIGF
Ga0208980_106349231	3300027887	Wetland	MATHAATTRNLSGLARALAQHGLLSEYDADAIHTQ
Ga0209069_106808171	3300027915	Watersheds	MATHAATRNISGLARALAQHGVMSEHEAEALQSQAQSSGASFV
Ga0268266_100335401	3300028379	Switchgrass Rhizosphere	MATHAASTRNITGLARALAQHGLMTEFEAEALQTQAQQAGVPFVDHVITG
Ga0268264_109583532	3300028381	Switchgrass Rhizosphere	MATHAATRNISGLARALAQHGVMSEAEAEALQTQSQ
Ga0268264_117131632	3300028381	Switchgrass Rhizosphere	MATHAATRNISGLARALAQHGLMTEYDAEALQTQSQQAGVSF
Ga0302160_100858161	3300028665	Fen	MATHAATRNISGLARALAQHGVMSEHEAESLQTQAQSSGASFVE
Ga0302258_10882322	3300028770	Fen	MATHAATRNISGLARALAQHGVMSEHEAESLQTQSESTGV
Ga0302290_101953771	3300028777	Fen	MATHAATRNISGLARALAQHGVMSEHEAESLQTQSEST
Ga0307504_104074571	3300028792	Soil	MATHAATRTLSGLARAMVQHGLLSEYDAETLQTQAQ
Ga0311350_101913223	3300030002	Fen	MATHAAATRNLSGLARALAQHGLMTEFDAEALQTQAQQANVSFVEQL
Ga0302172_100066484	3300030003	Fen	MATHAATRNISGLARALAQHGVMSEHEAESLQTQAQSSGASFVETV
Ga0302172_101280942	3300030003	Fen	MATHAAATRNLSGLARAFAQHGLMTEFDAEALQTQAQQANVSFVEQ
Ga0311366_110937641	3300030943	Fen	MATTTGTSGPRNINGLARAMVQHGLLTEHDANTLQGQAQAANIGFVEQ
Ga0311364_122025642	3300031521	Fen	MATHAATRNISGLARALAQQGFMSEHEAETMQSQAQTSGAS
Ga0265313_104267611	3300031595	Rhizosphere	MATQAAATRNLSGLARALAQHGLMTESDAEALQTQAQQGNI
Ga0318568_108076271	3300031819	Soil	MATHAAATRNISGLARALAQHGLMTEYEAETLQTQAQQAG
Ga0307473_101241121	3300031820	Hardwood Forest Soil	MATHAASTRNISGLARALAQHGLMTEYEAETLQTQ
Ga0310917_111383682	3300031833	Soil	MATHAAATRNISGLARALAQHGLMTEYEAETLQTQA
Ga0315297_113911041	3300031873	Sediment	MATHAASTRNISGLARALAQHGLMTEFEAETLQVQAQQAGTTFVDHVLAG
Ga0310900_114042212	3300031908	Soil	MATHAASTRNLSGLARALAQHGLMTEFEAEALQTQAQQAG
Ga0306921_108513442	3300031912	Soil	MATHAASTRNISGLARALAQHGLMTEYEAETLQTQAQQAGVS
Ga0311367_106499762	3300031918	Fen	MATHAATRNISGLARALAQHGVMSEHEAETLQSQAQSTGASF
Ga0311367_120879151	3300031918	Fen	MVSHEITRNISGLARALAQQGLMTEQEAETLQTQAHTAGV
Ga0315278_105210072	3300031997	Sediment	MATHAASTRNISGLARALAQHGLMTEFEAETLQVQAQQAGTTFVDHV
Ga0315278_113584451	3300031997	Sediment	MATHAASTRNISGLARALAQHGLMTEFEAEALQTQA
Ga0315274_111556711	3300031999	Sediment	MATHAASTRNISGLARALAQHGLMTEFEAEALQTQAQQAGATFVD
Ga0310890_106298422	3300032075	Soil	MATHAATRNISGLARALAQHGVMSEAEAEALQTQSQSS
Ga0315271_110219092	3300032256	Sediment	MATHAASTRNISGLARALAQHGLMTEFEAEALQTQAQQVGATFVDHVIAS
Ga0315287_112779081	3300032397	Sediment	MATHAASTRNISGLARALAQHGLMTEYEAETLQTQAQQA
Ga0335085_114018192	3300032770	Soil	MATHAAPRNISGLARAMVQHGLLSEYDAETLQNQAQAANVG
Ga0335082_102125841	3300032782	Soil	MATHVASTRNISGLARALAQHGLMTEYEAETLQTQAQQAGVSFVDH
Ga0316619_111015622	3300033414	Soil	MATHAASTRNISGLARALAQHGLMTEYEAETLQTQAQQAGTTF
Ga0316625_1027706842	3300033418	Soil	MATHAASTRNLSGLARALAQHGLMTEFEAEALQTQAQQAGTA
Ga0326726_124692151	3300033433	Peat Soil	MATHPATRDLSGLARAMVQHGLLSEYDADALQSQAHAAN
Ga0316613_112862552	3300033434	Soil	MATHAATRNLSGLARALAQQGLVSESDADAMQTQAAASGITFAEQF
Ga0310811_106749481	3300033475	Soil	MATHAATRNISGLARALAQHGVMSEAEAEALQTQSQSSG
Ga0316627_1029852611	3300033482	Soil	MATQAATTRNISGLARAMAQHGLMSEYEAEALQTQAQQGGITFV
Ga0316629_106068522	3300033483	Soil	MATHAATRNLSGLARALAQQGLVSEPDADAMQTQAAASGITFAEQFLQ
Ga0316630_106142821	3300033487	Soil	MATHEITRNLSGLARALAQQGLMGEHEADALQTQA
Ga0314864_0028391_3_134	3300033805	Peatland	MATHAATRDLSGLARAMVQHGLLSEYDAETLQTQATAASIGFVE
Ga0364925_0199574_1_111	3300034147	Sediment	MATHAATRNISGLARALAQHGVMSEHEAEALQTQAQT
Ga0370506_074788_615_734	3300034157	Untreated Peat Soil	MATHAATRTISGLARALAQSGVMSDYEAETLQSQAQASGV
Ga0364931_0180665_2_133	3300034176	Sediment	MATHPATRDLSGLARAMVQHGLLSEYDADALQSQAQAANVGFVE