Metagenome / Metatranscriptome Family F043046

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F043046
Family Type	Metagenome / Metatranscriptome
Number of Sequences	157
Average Sequence Length	48 residues
Representative Sequence	MSSTRRDDGIRQAQAARERGRAKVRSTTTAVTMASVVTAGALALA
Number of Associated Samples	136
Number of Associated Scaffolds	157

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	85.99 %
% of genes near scaffold ends (potentially truncated)	98.09 %
% of genes from short scaffolds (< 2000 bps)	95.54 %
Associated GOLD sequencing projects	128
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (50.955 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (23.567 % of family members)
Environment Ontology (ENVO)	Unclassified (18.471 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.134 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.53% β-sheet: 0.00% Coil/Unstructured: 42.47%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.56
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.56
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 157 Family Scaffolds
PF01258	zf-dskA_traR	14.65
PF05016	ParE_toxin	12.10
PF07690	MFS_1	3.82
PF01327	Pep_deformylase	1.91
PF05977	MFS_3	1.91
PF02424	ApbE	1.27
PF00728	Glyco_hydro_20	1.27
PF00282	Pyridoxal_deC	1.27
PF02720	DUF222	1.27
PF02782	FGGY_C	0.64
PF08241	Methyltransf_11	0.64
PF08044	DUF1707	0.64
PF00196	GerE	0.64
PF02852	Pyr_redox_dim	0.64
PF00171	Aldedh	0.64
PF13560	HTH_31	0.64
PF00144	Beta-lactamase	0.64

COG ID	Name	Functional Category	% Frequency in 157 Family Scaffolds
COG1734	RNA polymerase-binding transcription factor DksA	Transcription [K]	14.65
COG0242	Peptide deformylase	Translation, ribosomal structure and biogenesis [J]	1.91
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	1.91
COG0076	Glutamate or tyrosine decarboxylase or a related PLP-dependent protein	Amino acid transport and metabolism [E]	1.27
COG1477	FAD:protein FMN transferase ApbE	Posttranslational modification, protein turnover, chaperones [O]	1.27
COG3525	N-acetyl-beta-hexosaminidase	Carbohydrate transport and metabolism [G]	1.27
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.64
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.64
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.64
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.64
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.64
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.64

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.96 %
All Organisms	root	All Organisms	49.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.96 %
cellular organisms	root	All Organisms → cellular organisms	49.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.96 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	49.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.96 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	47.13 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.96 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	46.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.96 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	37.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.96 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	8.92 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.82 %
Kineosporiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales	1.27 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.27 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	1.91 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.64 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.96 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	4.46 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.82 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	1.27 %
Kineosporiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae	1.27 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.27 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.91 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.64 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.64 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.96 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	4.46 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.82 %
Kineococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineococcus	1.27 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.27 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1.27 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.91 %
Aeromicrobium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Aeromicrobium	0.64 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.64 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.96 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	4.46 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.82 %
Kineococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineococcus	1.27 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1.27 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.91 %
Streptomyces ipomoeae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces ipomoeae	0.64 %
Aeromicrobium massiliense	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Aeromicrobium → Aeromicrobium massiliense	0.64 %
Streptomyces clavuligerus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces clavuligerus	0.64 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.64 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.64 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_101319766	Not Available	613	Open in IMG/M
3300003505\|JGIcombinedJ51221_10119470	All Organisms → cellular organisms → Bacteria	1056	Open in IMG/M
3300004152\|Ga0062386_101338814	Not Available	596	Open in IMG/M
3300005178\|Ga0066688_10569843	Not Available	728	Open in IMG/M
3300005332\|Ga0066388_102672450	Not Available	910	Open in IMG/M
3300005337\|Ga0070682_100569332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	889	Open in IMG/M
3300005434\|Ga0070709_10062255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2378	Open in IMG/M
3300005435\|Ga0070714_101007681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	810	Open in IMG/M
3300005436\|Ga0070713_101892721	Not Available	579	Open in IMG/M
3300005439\|Ga0070711_100386682	Not Available	1133	Open in IMG/M
3300005445\|Ga0070708_101382816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	657	Open in IMG/M
3300005455\|Ga0070663_100244497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1418	Open in IMG/M
3300005518\|Ga0070699_102213218	Not Available	501	Open in IMG/M
3300005539\|Ga0068853_100276055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1549	Open in IMG/M
3300005544\|Ga0070686_101680053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	539	Open in IMG/M
3300005545\|Ga0070695_101430908	Not Available	574	Open in IMG/M
3300005547\|Ga0070693_101334011	Not Available	556	Open in IMG/M
3300005548\|Ga0070665_101276514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	744	Open in IMG/M
3300005610\|Ga0070763_10375829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	795	Open in IMG/M
3300005841\|Ga0068863_100289857	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1587	Open in IMG/M
3300006028\|Ga0070717_10975882	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	771	Open in IMG/M
3300006162\|Ga0075030_100378280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1129	Open in IMG/M
3300006173\|Ga0070716_100122110	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1632	Open in IMG/M
3300006173\|Ga0070716_100696856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	775	Open in IMG/M
3300006173\|Ga0070716_101609901	Not Available	533	Open in IMG/M
3300006175\|Ga0070712_100022617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4143	Open in IMG/M
3300006175\|Ga0070712_100123419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1952	Open in IMG/M
3300006175\|Ga0070712_100196615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1581	Open in IMG/M
3300006791\|Ga0066653_10748082	Not Available	510	Open in IMG/M
3300006806\|Ga0079220_10487566	Not Available	838	Open in IMG/M
3300006914\|Ga0075436_100389467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1009	Open in IMG/M
3300009098\|Ga0105245_10622920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1107	Open in IMG/M
3300009148\|Ga0105243_10249661	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1583	Open in IMG/M
3300009698\|Ga0116216_10626055	Not Available	648	Open in IMG/M
3300009700\|Ga0116217_10269870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1100	Open in IMG/M
3300009839\|Ga0116223_10486218	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	719	Open in IMG/M
3300010047\|Ga0126382_12489403	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300010359\|Ga0126376_10192307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1682	Open in IMG/M
3300010360\|Ga0126372_11896326	Not Available	641	Open in IMG/M
3300010371\|Ga0134125_12653580	Not Available	545	Open in IMG/M
3300010373\|Ga0134128_12283314	Not Available	596	Open in IMG/M
3300010373\|Ga0134128_12632315	Not Available	554	Open in IMG/M
3300010379\|Ga0136449_101677014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	960	Open in IMG/M
3300010379\|Ga0136449_102513312	Not Available	738	Open in IMG/M
3300010396\|Ga0134126_12343176	Not Available	581	Open in IMG/M
3300010400\|Ga0134122_10605907	Not Available	1013	Open in IMG/M
3300010403\|Ga0134123_11826092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	662	Open in IMG/M
3300010876\|Ga0126361_10714781	Not Available	1722	Open in IMG/M
3300012189\|Ga0137388_11130892	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	720	Open in IMG/M
3300012198\|Ga0137364_11393639	Not Available	519	Open in IMG/M
3300012203\|Ga0137399_10792345	Not Available	798	Open in IMG/M
3300012203\|Ga0137399_11278968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	617	Open in IMG/M
3300012209\|Ga0137379_10047927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4120	Open in IMG/M
3300012209\|Ga0137379_10741334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces ipomoeae	887	Open in IMG/M
3300012209\|Ga0137379_11685070	Not Available	531	Open in IMG/M
3300012211\|Ga0137377_10139767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	2316	Open in IMG/M
3300012211\|Ga0137377_11287423	Not Available	661	Open in IMG/M
3300012351\|Ga0137386_11061722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	573	Open in IMG/M
3300012356\|Ga0137371_10134422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Aeromicrobium → Aeromicrobium massiliense	1937	Open in IMG/M
3300012357\|Ga0137384_10144960	Not Available	1988	Open in IMG/M
3300012361\|Ga0137360_11795704	Not Available	519	Open in IMG/M
3300012961\|Ga0164302_11592622	Not Available	543	Open in IMG/M
3300012985\|Ga0164308_10159820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1675	Open in IMG/M
3300012986\|Ga0164304_10604796	Not Available	819	Open in IMG/M
3300015372\|Ga0132256_102485216	Not Available	620	Open in IMG/M
3300016294\|Ga0182041_10351586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1239	Open in IMG/M
3300016422\|Ga0182039_10896371	Not Available	792	Open in IMG/M
3300017821\|Ga0187812_1008313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3594	Open in IMG/M
3300017930\|Ga0187825_10409704	Not Available	522	Open in IMG/M
3300017937\|Ga0187809_10358538	Not Available	548	Open in IMG/M
3300017959\|Ga0187779_10363752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	937	Open in IMG/M
3300017961\|Ga0187778_11026554	Not Available	572	Open in IMG/M
3300017970\|Ga0187783_10203040	All Organisms → cellular organisms → Bacteria	1455	Open in IMG/M
3300017972\|Ga0187781_10978332	Not Available	618	Open in IMG/M
3300017974\|Ga0187777_10799432	Not Available	674	Open in IMG/M
3300019361\|Ga0173482_10469250	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	603	Open in IMG/M
3300020580\|Ga0210403_11008712	Not Available	651	Open in IMG/M
3300020580\|Ga0210403_11402963	All Organisms → cellular organisms → Bacteria → Terrabacteria group	529	Open in IMG/M
3300020581\|Ga0210399_10590655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	919	Open in IMG/M
3300021181\|Ga0210388_10167753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1913	Open in IMG/M
3300021388\|Ga0213875_10123028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1212	Open in IMG/M
3300021402\|Ga0210385_10694999	Not Available	778	Open in IMG/M
3300021402\|Ga0210385_11058345	Not Available	623	Open in IMG/M
3300021403\|Ga0210397_10805462	Not Available	725	Open in IMG/M
3300021403\|Ga0210397_11070680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	626	Open in IMG/M
3300021474\|Ga0210390_10777077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	794	Open in IMG/M
3300021477\|Ga0210398_11482547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	528	Open in IMG/M
3300021559\|Ga0210409_11295955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	604	Open in IMG/M
3300021559\|Ga0210409_11563906	Not Available	535	Open in IMG/M
3300021560\|Ga0126371_13012435	Not Available	570	Open in IMG/M
3300025588\|Ga0208586_1120423	Not Available	558	Open in IMG/M
3300025906\|Ga0207699_10523926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	857	Open in IMG/M
3300025907\|Ga0207645_11144632	Not Available	524	Open in IMG/M
3300025915\|Ga0207693_10091273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2388	Open in IMG/M
3300025927\|Ga0207687_11432365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	594	Open in IMG/M
3300025929\|Ga0207664_10510060	Not Available	1077	Open in IMG/M
3300025929\|Ga0207664_10813509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	840	Open in IMG/M
3300025939\|Ga0207665_11389411	Not Available	559	Open in IMG/M
3300025961\|Ga0207712_10384962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1175	Open in IMG/M
3300026322\|Ga0209687_1165015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	705	Open in IMG/M
3300026551\|Ga0209648_10419091	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	860	Open in IMG/M
3300027080\|Ga0208237_1044517	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	665	Open in IMG/M
3300027080\|Ga0208237_1064301	Not Available	540	Open in IMG/M
3300027110\|Ga0208488_1029753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1013	Open in IMG/M
3300027590\|Ga0209116_1133230	Not Available	543	Open in IMG/M
3300027662\|Ga0208565_1119334	Not Available	784	Open in IMG/M
3300027853\|Ga0209274_10269974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	872	Open in IMG/M
3300027884\|Ga0209275_10726007	Not Available	572	Open in IMG/M
3300027908\|Ga0209006_10645415	Not Available	871	Open in IMG/M
3300028781\|Ga0302223_10048960	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1444	Open in IMG/M
3300028784\|Ga0307282_10072425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1568	Open in IMG/M
3300028789\|Ga0302232_10663271	Not Available	512	Open in IMG/M
3300028871\|Ga0302230_10157479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	889	Open in IMG/M
3300028885\|Ga0307304_10030544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1894	Open in IMG/M
3300028906\|Ga0308309_10716476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	869	Open in IMG/M
3300030494\|Ga0310037_10482573	Not Available	504	Open in IMG/M
3300030580\|Ga0311355_10083702	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3606	Open in IMG/M
3300030580\|Ga0311355_11048188	Not Available	729	Open in IMG/M
3300030618\|Ga0311354_11462531	Not Available	606	Open in IMG/M
3300031199\|Ga0307495_10082928	Not Available	728	Open in IMG/M
3300031233\|Ga0302307_10347762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	756	Open in IMG/M
3300031234\|Ga0302325_12031073	Not Available	708	Open in IMG/M
3300031544\|Ga0318534_10479843	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	711	Open in IMG/M
3300031668\|Ga0318542_10567741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	591	Open in IMG/M
3300031681\|Ga0318572_10675302	Not Available	615	Open in IMG/M
3300031682\|Ga0318560_10776795	Not Available	517	Open in IMG/M
3300031708\|Ga0310686_110781716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces clavuligerus	652	Open in IMG/M
3300031708\|Ga0310686_119189620	Not Available	932	Open in IMG/M
3300031747\|Ga0318502_10939100	Not Available	526	Open in IMG/M
3300031765\|Ga0318554_10530711	Not Available	665	Open in IMG/M
3300031778\|Ga0318498_10441068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineococcus	576	Open in IMG/M
3300031781\|Ga0318547_10886069	Not Available	557	Open in IMG/M
3300031805\|Ga0318497_10457970	Not Available	714	Open in IMG/M
3300031819\|Ga0318568_11002681	Not Available	516	Open in IMG/M
3300031821\|Ga0318567_10533399	Not Available	666	Open in IMG/M
3300031846\|Ga0318512_10095043	Not Available	1395	Open in IMG/M
3300031879\|Ga0306919_10615242	Not Available	838	Open in IMG/M
3300031946\|Ga0310910_10606393	Not Available	868	Open in IMG/M
3300031947\|Ga0310909_11600543	Not Available	516	Open in IMG/M
3300031954\|Ga0306926_11844685	Not Available	685	Open in IMG/M
3300032008\|Ga0318562_10238643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1055	Open in IMG/M
3300032008\|Ga0318562_10672046	Not Available	596	Open in IMG/M
3300032010\|Ga0318569_10433777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	613	Open in IMG/M
3300032010\|Ga0318569_10455738	Not Available	596	Open in IMG/M
3300032025\|Ga0318507_10449380	Not Available	561	Open in IMG/M
3300032035\|Ga0310911_10543636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	674	Open in IMG/M
3300032044\|Ga0318558_10715305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	501	Open in IMG/M
3300032055\|Ga0318575_10627767	Not Available	544	Open in IMG/M
3300032067\|Ga0318524_10112648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1356	Open in IMG/M
3300032074\|Ga0308173_11225222	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	702	Open in IMG/M
3300032089\|Ga0318525_10692873	Not Available	518	Open in IMG/M
3300032160\|Ga0311301_10569422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1647	Open in IMG/M
3300032160\|Ga0311301_13018822	Not Available	505	Open in IMG/M
3300032205\|Ga0307472_102108197	Not Available	567	Open in IMG/M
3300032805\|Ga0335078_11524051	Not Available	746	Open in IMG/M
3300032954\|Ga0335083_11411503	Not Available	532	Open in IMG/M
3300033290\|Ga0318519_10901175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineococcus	546	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.36%
Host-Associated	Host-Associated	7.64%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.17%
Plants	Host-Associated → Plants	7.64%
Aquatic	Environmental → Aquatic	3.18%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.08%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.73%
Peat	Environmental → Terrestrial → Peat	5.10%
Freshwater	Environmental → Aquatic → Freshwater	2.55%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.27%
Sediment	Environmental → Aquatic → Sediment	0.64%
Roots	Host-Associated → Plants → Roots	0.64%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.96%
Loam	Environmental → Terrestrial → Soil → Loam	21.66%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	5.10%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.18%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.55%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.55%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.27%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.64%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.64%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.75%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	26.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.01%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.64%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	5.10%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.18%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.55%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.27%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.64%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.64%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.64%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.64%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.64%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.64%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.57%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.83%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.28%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.73%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.73%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.10%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.46%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.82%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.18%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.55%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.55%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.91%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.27%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.64%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.64%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.64%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.64%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.64%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.64%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.64%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.64%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.64%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.64%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.64%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.64%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.64%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.64%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.64%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025588	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027080	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF009 (SPAdes)	Environmental	Open in IMG/M
3300027110	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF001 (SPAdes)	Environmental	Open in IMG/M
3300027590	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O1 (SPAdes)	Environmental	Open in IMG/M
3300027662	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028781	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_3	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028789	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3	Environmental	Open in IMG/M
3300028871	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_1	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1013197661	3300002245	Forest Soil	MGYMSADRDGIRRAIADRKRGRSRVKSTTTVVTMASVVTAGALAL
JGIcombinedJ51221_101194703	3300003505	Forest Soil	MGNMSSAHRDGIRRAIAARDDGRNKVRSTTTAVTMASVVTAGRWP*
Ga0062386_1013388141	3300004152	Bog Forest Soil	MGNMSSAHRDGIRRAIAARELGRDKVRSTTTAVTMASVVTAGALALALPGSTHHSTTS
Ga0066688_105698431	3300005178	Soil	MSNARRDDGIRQAVTARERGRAKVRSTTTAVTMASVVTAGALAL
Ga0066388_1026724502	3300005332	Tropical Forest Soil	MLKDMSSERRDDGIRQAVAARARGRSKVRSTTTAVTMASVVAAGALAFGLPGSTHKTSTS
Ga0070682_1005693321	3300005337	Corn Rhizosphere	MSSARQNDGIRQAVAARERGRAKVRSATTTVTVASVVTAGALALALPGSANKTTSSGS
Ga0070709_100622552	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MGDMSSTDRDGIRRAIAARERGRDKVRSATTAVAVASVAA
Ga0070714_1010076811	3300005435	Agricultural Soil	MSSARRNDGIRQAVAARERGRAKVRSATTTVTVASVVTAGALALALPGS
Ga0070713_1018927211	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSSARRDDGIRQAVTARERGRAKVRSTTTAVTMASVVTAG
Ga0070711_1003866821	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MDDMSDARRDDGIRQAVAARNRGRSKIRSTTTAVTVASVVTAGALALALPG
Ga0070708_1013828161	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSSARRNDGIRQAVAARERGRAKVRSTTTTVTVASVVTAGALA
Ga0070663_1002444973	3300005455	Corn Rhizosphere	MNDMSNARRDDGIRQAVAARERGRAKVRSATTTVTVASVVTAGAL
Ga0070699_1022132181	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MSRARRDNGIRQAVAARERGRAKVRSTTTTVTVASVVTAG
Ga0068853_1002760554	3300005539	Corn Rhizosphere	MSSARQNDGIRQAVAARERGRAKVRSATTTVTVAGVVTAGALALALPGSANKTTSSGSTSTG
Ga0070686_1016800532	3300005544	Switchgrass Rhizosphere	MSSARQNDGIRQAVAARERGRARVRSATTTVTVASVVTAGALALAL
Ga0070695_1014309082	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MDDMSDARRDDGIRQAVAARNRGRSKIRSTTTAVTVASVV
Ga0070693_1013340111	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MSSARRNDGVRQAVAARERGRAKVRSATTTVTVASVVTAGALALAL
Ga0070665_1012765141	3300005548	Switchgrass Rhizosphere	MSSARQNDGIRQAVAARERGRAKVRSATTTVTVASVVTAGALALALPGS
Ga0070763_103758291	3300005610	Soil	MGNMSSAHRDGIRRAIAARDDGRNKVRSTTTAVTMAS
Ga0068863_1002898573	3300005841	Switchgrass Rhizosphere	MSSARQNDGIRQAVAARERGRAKVRSATTTVTVAS
Ga0070717_109758823	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MSDMSSARRNDGIRQAVAARERGRAKVRSATTTVTVASVV
Ga0075030_1003782802	3300006162	Watersheds	MGYMSSAQRDGIRRAIAAREYGRSKVRSTTTAVTMASVVTAGALAL
Ga0070716_1001221101	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MSSARQNDGIRQAVAARERGRAKVRSATTTVTVASVVTAGALALALPGSANK
Ga0070716_1006968563	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MSSARRNDGVRQAVAARERGRAKVRSATTTVTVASVVTAGAL
Ga0070716_1016099011	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MSDARRNDGIRRAVAARERGRSKVRSTTTAVTVASVVTAGALALALPG
Ga0070712_1000226171	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MGDMSSTDRDGIRRAVAARERGRDKVRSATTAVAVASVAAAGAF
Ga0070712_1001234191	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MDDMSDARRDDGIRQAVAARNRGRSKVRSTTTAVTVASVVTAGALALALPGSTSKASTSSGS
Ga0070712_1001966151	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MSSARRNDGVRQAVAARERGRAKVRSATTTVTVASVVTAGALALALP
Ga0066653_107480821	3300006791	Soil	MSSARRNDGVRQAVAARERGRAKVRSTTTTVTVASVVTAGALALALPGSSHATSTSSG
Ga0079220_104875662	3300006806	Agricultural Soil	MSNTNEDGVRHAIAARERGRDKVRTATTAVAVASVAAAGAFALVLPGST
Ga0075436_1003894674	3300006914	Populus Rhizosphere	MSDMSSARQNDGIRQAVAARERGRAKVRSATTTVTVASVVTAGALALALPGSAN
Ga0105245_106229204	3300009098	Miscanthus Rhizosphere	MSDMSSARQNDGIRQAVAARERGRAKVRSATTTVTVAGVVTAGALALALPGSANKTTSSGSTSTG
Ga0105243_102496614	3300009148	Miscanthus Rhizosphere	MSDMSSARRNDGVRQTVAARERGRAKVRSATTTVTVASVVTAG
Ga0116216_106260551	3300009698	Peatlands Soil	MSNAHRDRIRRAMAERERGRAKVRSATTTVAVASVA
Ga0116217_102698701	3300009700	Peatlands Soil	MGYMSSAHRDGIRRAIAAREQGRSKVRSTTTAVTMASVVTAGALALALPGSAHKT
Ga0116223_104862181	3300009839	Peatlands Soil	MVNMSSAHRDGIRRAIAAREHGRNKVRSTTTATTVGMVTAA
Ga0126382_124894032	3300010047	Tropical Forest Soil	MLKDMSSERRDDGIRQAVAARARGRSKVRSTTTAVTMASVVAAGALAFGLPGSTH
Ga0126376_101923073	3300010359	Tropical Forest Soil	MRDMSSTRRDDGIRQAQAARERGRSKVRSTTTAVTMASVVTAGALA
Ga0126372_118963262	3300010360	Tropical Forest Soil	MNGMSNARRDDGIRQAVATRERGRAKVRSTTTAVTMASVVTAGALALVLPGSTH
Ga0134125_126535802	3300010371	Terrestrial Soil	MNDMSNARRDDGIRQAVAARERGRAKVRSATTTVTVASVVTAGALALALPGSA
Ga0134128_122833142	3300010373	Terrestrial Soil	MDDMSDARRDDGIRQAVAARNRGRSKIRSTTTAVTVASVVTAGALALALPGS
Ga0134128_126323151	3300010373	Terrestrial Soil	MNDMSNARRDDGIRQAVAARERGRAKVRSATTTVTVASVVTAGALA
Ga0136449_1016770141	3300010379	Peatlands Soil	MSRAHRDGIRRAVAAREQGRAKVRSTTTAVTMASVVVTGAV
Ga0136449_1025133121	3300010379	Peatlands Soil	MSREHRDGIRRAVAAREQGRAKVRSTTTAVTLASVAVA
Ga0134126_123431761	3300010396	Terrestrial Soil	MSDMSSARRNDGVRQAVAARERGRAKVRSATTTVTVASVVTAGALA
Ga0134122_106059071	3300010400	Terrestrial Soil	MGDMSSARRNDGIRQAVAARERGRAKVRSATTTVTVASVVTAGALALALPGSA
Ga0134123_118260923	3300010403	Terrestrial Soil	MSSARRNDGVRQAVAARERGRAKVRSATTTVTVASVVTA
Ga0126361_107147811	3300010876	Boreal Forest Soil	MSRADRDSVQRALAARERGRARIRSTTTAVTMASVVAAGV
Ga0137388_111308922	3300012189	Vadose Zone Soil	MRYMSRARRDDGIRQAIAARERGRNKVRSTTTAVTMASVV
Ga0137364_113936392	3300012198	Vadose Zone Soil	MNGMSNARRDDGIREAVAARDRGRAKVRSTTTAVTMASVVTAGALALALPGSSSK
Ga0137399_107923453	3300012203	Vadose Zone Soil	MNDMSDARRDDGIRQAVAARERGRSKVRSTTTAVTVASVVTAGALALALPGATSKAS
Ga0137399_112789682	3300012203	Vadose Zone Soil	MGDMSSARRNDEVRQAVAARERGRAKVRSTTTAVTMASVVTAGALALALPGSTNKTTSSG
Ga0137379_100479278	3300012209	Vadose Zone Soil	MDDMSDARRDDGIRQAVAARDRGRSKVRSNTTAVTVASVV
Ga0137379_107413342	3300012209	Vadose Zone Soil	MNGMSNARRDDGIRQAVAARERGRSKVRSTTTAVTMASVVTAGALDWQPK*
Ga0137379_116850702	3300012209	Vadose Zone Soil	MNGMSNARRDDTGIRQAVVARDRGRAKVRSTTTAVTMASVVTAGALALAL
Ga0137377_101397676	3300012211	Vadose Zone Soil	MNDMSDARRNDGIRRAVAARERGRSKVRSTTTAVTVASVVTAGALAL
Ga0137377_112874231	3300012211	Vadose Zone Soil	MSNARRDDGIRQAVAARDRGRAKVRSTTTAVTMASVVTAGALALA
Ga0137386_110617222	3300012351	Vadose Zone Soil	MGDMSSARRNDGIRQAVAARERGRAKVRSTTTTVTVASVVTAGALALALP
Ga0137371_101344224	3300012356	Vadose Zone Soil	MDDMSDARRDDGIRQAVAARDRGRSKVRSTTTAVTVASVVTAGALALALPGSTSKASTSSTS
Ga0137384_101449602	3300012357	Vadose Zone Soil	MSRARRDDGIRQAIAARERGRTKVRSTTTTVAVASVVTAGALALALPGSTQKTASSSTGS
Ga0137360_117957042	3300012361	Vadose Zone Soil	MGYMSSAHREGIRRAIAAREQGRGKVRSATTAVTMASVVTAGALA
Ga0164302_115926221	3300012961	Soil	MDDMSDARRDDGIRQAVAARERGRSKVRSTTTAVTM
Ga0164308_101598201	3300012985	Soil	MSSARRNDGVRQAVAARERGRAKVRSATTTVTVASVVTAG
Ga0164304_106047963	3300012986	Soil	MSDMSSARRNDGVRQAVAARERGRAKVRSATTTVTVASVVTAGALALALPGSANKT
Ga0132256_1024852162	3300015372	Arabidopsis Rhizosphere	MSDMSSARRNDRVRQAVAARERGRAKVRSATTTVTVASVVTAGALALALPGSANKTTSSGSTS
Ga0182041_103515863	3300016294	Soil	MSSTRRDDGIRQAQAARERGRSKVRSTTTAVTMASVVTA
Ga0182039_108963711	3300016422	Soil	MSRTRRDNGIRQAQAARERGRAKVRSTTTAVTMASVVTAGALALVLPGSTHKASASSSSG
Ga0187812_10083131	3300017821	Freshwater Sediment	MGYMSNAHRDRIRRAMAERERGRAKVRSATTTVTV
Ga0187825_104097042	3300017930	Freshwater Sediment	MDDMSSERRNDGIRQAVAARERGRSKVRSTTTAVTVASVVTAGALALALPGSTSKASTSS
Ga0187809_103585382	3300017937	Freshwater Sediment	MGDMSSTDRDGIRRAIAARERGRDKVRSATTAVAVASVAAAGAFALVLPGS
Ga0187779_103637521	3300017959	Tropical Peatland	MSNAHRDRIRRAVAARESGRAKVRSATKAVTMASVVTAGA
Ga0187778_110265542	3300017961	Tropical Peatland	MAYMSSAHRDRIYRAVAARERGHAKVRSTTTAVTMASVVAAG
Ga0187783_102030403	3300017970	Tropical Peatland	MGPMSKADRDGIKRAMATRAQGRAKVRSTTTAVTMASVVVTGAVALALPGSTH
Ga0187781_109783321	3300017972	Tropical Peatland	MGYMSSDQRDRVRRAIAARERGRSKVRSATTAVTMASVATAGAL
Ga0187777_107994322	3300017974	Tropical Peatland	MSSTRRDDGIRQAQAARERGRAKVRSTTTAVTMASVVTAGALAL
Ga0173482_104692502	3300019361	Soil	MSSARRNDGIRQAVAARERGRAKVRSATTTVTVASVET
Ga0210403_110087122	3300020580	Soil	MSKARRDDGIRQAVAARERGRAKVRSTTTAVTMASVVTAG
Ga0210403_114029632	3300020580	Soil	MRYMSSSDRDGIRRAIADRERGRNKVRSTTTAVTMASVVTAGALALAL
Ga0210399_105906552	3300020581	Soil	MSRADRDSVHRAMAARERGRAKVRSTTTAVTMASVVAAGVVT
Ga0210388_101677531	3300021181	Soil	MGNMSSAHRDGIRRAIAARDDGRNKVRSTTTAVTMASV
Ga0213875_101230281	3300021388	Plant Roots	MNRDRILRAAQVRDRGRSRVRSTTTAVGMASVVTAGAVALALPG
Ga0210385_106949992	3300021402	Soil	MDDMSRADRDSVRRAMAARERGRAKVRSTTTAVTMASVVAAGVVTLALPGSTH
Ga0210385_110583452	3300021402	Soil	MGNMSSAHRDGIRRAIAARDDGRNKVRSTTTAVTMASVVTAGALALALPGSTHNT
Ga0210397_108054622	3300021403	Soil	MSSARRDNGIREAQAARERGRAKVRSATTAVTMASVVTA
Ga0210397_110706801	3300021403	Soil	MGNMSSAHRDGIRRAIAARDDGRNKVRSTTTAVTMASVVTAGA
Ga0210390_107770772	3300021474	Soil	MNRDRITRAVEARERGRAKVRTATTVVGVASVVTAGAVAL
Ga0210398_114825471	3300021477	Soil	MGDMSRADRHSVRRAMAARERGRAKVRSTTTAVTMASVVAAGVVTLALPGS
Ga0210409_112959551	3300021559	Soil	MDDMSDARRDDGIRQAVAARERGRSKVRSTTTAVTMASVVTAGALALALPGSAHTT
Ga0210409_115639061	3300021559	Soil	MDDMSRADRDSVHRAMAARERGRAKVRSTTTAVTMASVVA
Ga0126371_130124351	3300021560	Tropical Forest Soil	VRDHRLGHMSSAHRDGVRRAIAARERGRDKVRSTTTTVTVASVVAVGALALALPGSTHKTSASTSGGSSSSVN
Ga0208586_11204231	3300025588	Arctic Peat Soil	MSKDRDGIRRAIADRERGRSKVKSTTTAVTVASVVTA
Ga0207699_105239261	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MSDMSSARRNDGIRQAVAARERGRAKVRSATTTVTVASVVTA
Ga0207645_111446321	3300025907	Miscanthus Rhizosphere	MSSARRNDGIRQAVAARERGRAKVRSATTTVTVASVVTAGALALPLPGSANKT
Ga0207693_100912731	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MSSARQNDGIRQAVAARERGRARVRSATTTVTVASVVTAGALALALPGSANKTTSSGST
Ga0207687_114323651	3300025927	Miscanthus Rhizosphere	MSSARQNDGIRQAVAARERGRAKVRSATTTVTVAGVVTAGALALALP
Ga0207664_105100601	3300025929	Agricultural Soil	MDDMSDARRDDGIRQAVAARERGRSKVRSTTTAVTMASVVTAGALALALPGSTSKASTSSGSGST
Ga0207664_108135093	3300025929	Agricultural Soil	MSDMSSARRDDGIRQAVVARERGRSKVRSTTTAVT
Ga0207665_113894111	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MDDMSDARRDDGIRQAVAARERGRSKVRSTTTAVTVASVVTAGALALALPG
Ga0207712_103849624	3300025961	Switchgrass Rhizosphere	MSSARQNDGIRQAVAARERGRAKVRSTTTTVTVASVVTAGALALALP
Ga0209687_11650152	3300026322	Soil	MNGMSDARRDDGIRQAVAARERGRAKVRSTTTAVTMASVVTAGALALALPGSATKTTSSG
Ga0209648_104190911	3300026551	Grasslands Soil	MSSKPRDGIRQAMAARERGRAKVRSTTTAVTMASVVTAGALAHDRGGRGPDL
Ga0208237_10445172	3300027080	Forest Soil	MGNMSSAHRDGIRRAIAARDDGRNKVRSTTTAVTMASVVTA
Ga0208237_10643011	3300027080	Forest Soil	MSSAHRDGIRDAVAARERGRSKVRSTTAAVTMASVVTAGALALALPGSTHKTETSTGSSPTPSGSGS
Ga0208488_10297531	3300027110	Forest Soil	MSSAHRDGIRHAAAARERGRGKVRSTTTAVTMASVVTAGALALALPGSTHKAETSTGKTETS
Ga0209116_11332301	3300027590	Forest Soil	MSSAHPDGIGSAVAARERGRSKVRSTTTAVTMASVVTAGALALALPGSTHKTE
Ga0208565_11193342	3300027662	Peatlands Soil	MGYMSDAHRDRIRRAMAERERGRAKVRSATTTVAVASVAA
Ga0209274_102699741	3300027853	Soil	MSDMSNAHRDSLRRAMAARERGRARVRSATTAVTLSS
Ga0209275_107260071	3300027884	Soil	MDDMSRADRDSVHRAMAARERGRAKVRSTTTAVTMASV
Ga0209006_106454151	3300027908	Forest Soil	MRVMSSAHRDRIRHAVAARERGRGKVRSTTTAVTMASV
Ga0302223_100489602	3300028781	Palsa	MSSAHRDGIRHAVAARERGRGKVRSTTTAVTMASVVTAGALALTLPGSTHKTET
Ga0307282_100724251	3300028784	Soil	MSSARRNDGIRQAVAARERGRAKVRSATTTVTVASVVTAGALALA
Ga0302232_106632712	3300028789	Palsa	MSSAHRDGIRHAAAARERGRGKVRSTTTAVTMASVVTAGALALALPGSTHKTETSA
Ga0302230_101574792	3300028871	Palsa	MRVMSRAHRDGIRHAVAARERGRSKVRSTTTAVTMASVV
Ga0307304_100305441	3300028885	Soil	MSSARRNDGIRQAVAARERGRAKVRSATTTVTVASVVTAGAL
Ga0308309_107164763	3300028906	Soil	MGDMSRADRDSVQRAMAARERGRAKVRSTTTAVTMASVVAA
Ga0310037_104825731	3300030494	Peatlands Soil	MGNMSSAQRDGIRRAIAAREHGRNKVRSTTTAVTMASVVTA
Ga0311355_100837021	3300030580	Palsa	MRVMSSAHRDGIRHAVADRERGRGKVRSATTAVTMASVVTAGALALALPGSTHKTE
Ga0311355_110481881	3300030580	Palsa	MSSAHRDGIRHAAAARERGRGKVRSTTTAVTMASVVTAGALALA
Ga0311354_114625311	3300030618	Palsa	MGGMSSAHRDGIRQAVAARERGRSRVRSTTTAVTMASVVTAGALALALP
Ga0307495_100829281	3300031199	Soil	MSSARRNDGIRQAVAARERGRAKVRSTTTTVTVASVVTAGALALALPG
Ga0302307_103477621	3300031233	Palsa	MSSAHRDGIRHAVAARERGRSKVRSTTTAVTMASVVTAGALALALPGSTHKTET
Ga0302325_120310731	3300031234	Palsa	MGYMSADRDGIRRAIADRKRGRSRVKSTTTAVTMASVVTAGALALVLPGAAHKTE
Ga0318534_104798432	3300031544	Soil	MRYMSSAQRDGIRRAVAARQRGRDKVRSATTAVTVASVVTAGALALALPGSAHKTGT
Ga0318542_105677412	3300031668	Soil	MSNAHRDRIRRAIAARETGRAKVRSATTAVTMASVV
Ga0318572_106753022	3300031681	Soil	MSSTRRDDGIRQAQAARERGRAKVRSTTTAVTMASVVTAGALALA
Ga0318560_107767952	3300031682	Soil	MSSARRDNGIRQAQAARERGRAKVRSTTTAVTMASVVAAGALALA
Ga0310686_1107817161	3300031708	Soil	MGDMSRADRDSVRRAMAARERGRAKVRSTTTAVTMASV
Ga0310686_1191896201	3300031708	Soil	MSRAHRDGIRRAVAAREQGRAKVRSTTTAVTMASVVVTGAVALTLPGSTHKTATSS
Ga0318502_109391002	3300031747	Soil	MSSTRRDDGIRQAQAARERGRAKVRSTTTAVTMASVVTAGALALVLPGSTHKASASSSSG
Ga0318554_105307112	3300031765	Soil	MSNAHRDRIRRAIAARETGRAKVRSATTAVTMASVVTAGAVALA
Ga0318498_104410681	3300031778	Soil	MSNAHRDRIRRAIAARETGRAKVRSATTAVTMASVVTAGAVALALP
Ga0318547_108860691	3300031781	Soil	MGYMSRADRDGIRRAIAARERGRDKVRSTTTAVTMASVVTAGALALVLPGSAHKTASSS
Ga0318497_104579701	3300031805	Soil	MSRTRRDNGIRQAQAARERGRAKVRSTTTAVTMASVVTAGALAL
Ga0318568_110026812	3300031819	Soil	MGYMSRADRDGIRRAIAARERGRDKVRSTTTAVTMASVVTAGALALALPG
Ga0318567_105333991	3300031821	Soil	MSSTRRDDGIRQAQAARERGRAKVRSTTTAVTVASVVTAGALALVLPGSTHKASA
Ga0318512_100950433	3300031846	Soil	MERMSNDNRDGIRRAIAARERGRDKVRSATTTVGVASVVTAGALALALPG
Ga0306919_106152421	3300031879	Soil	MSSARRDNGIRQAQAARERGRAKVRSTTTAVTMASVVA
Ga0310910_106063932	3300031946	Soil	MSSARRDNGIRQAQAARERGRAKVRSTTTAVTMASVVAAGALALALPGSTHKAS
Ga0310909_116005431	3300031947	Soil	MSSARRDDGIRQALAARERGRAKVRSTTTAVTMASVVAAGALALALPGSTHKTSTSST
Ga0306926_118446851	3300031954	Soil	MRNMSTRRDNGIREAQVARERGRAKVRSTTTAVTMASVVTAGALALALP
Ga0318562_102386431	3300032008	Soil	MSSKRRDNGIRQAQAARERGRAKVRSTTTAVTMASVVTAGALALV
Ga0318562_106720461	3300032008	Soil	MSSARRDNGIRQAQAARERGRAKVRSTTTAVTMASVVAAGALALALPGSTHKT
Ga0318569_104337772	3300032010	Soil	MSNAHRDRIRRAIAARETGRAKVRSATTAVTMASVVTAGAV
Ga0318569_104557382	3300032010	Soil	MSSARRDNGIRQAQAARERGRAKVRSTTTAVTMASVVAA
Ga0318507_104493802	3300032025	Soil	MSSARRDNGIRQAQAARERGRAKVRSTTTAVTMASVVAAGALALALP
Ga0310911_105436361	3300032035	Soil	MSSARRDNGIRQAQAARERGRAKVRSTTTAVTMASVVAAGALALVLPGSTHKTST
Ga0318558_107153052	3300032044	Soil	MSNAHRDRIRRAIAARETGRAKVRSATTAVTMASVVA
Ga0318575_106277671	3300032055	Soil	MGYMSRADRDGIRRAIAARERGRDKVRSTTTAVTMASVVTAGALALVLPGSAHK
Ga0318524_101126481	3300032067	Soil	MGYMSRADRDGIRRAIAARERGQNKVRSTTTAVTMASVVTAGALALVLPGSTHKTASSS
Ga0308173_112252221	3300032074	Soil	MSSARRNDGVRQAVAARERGRAKVRSTTTTVTVASVVTA
Ga0318525_106928731	3300032089	Soil	MSSTRRDDGIRQAQAARERGRAKVRSTTTAVTMASVVTAGALALALPGSTHK
Ga0311301_105694221	3300032160	Peatlands Soil	MGYMSSAHRDGIRRAIAAREQGRSKVRSTTTAVTMASVVTAGALALALPGSAHKTSTS
Ga0311301_130188221	3300032160	Peatlands Soil	MGNMSSAHRDGIRRAIAARELGRDKVRSTTTAVTMASVVTAGALALA
Ga0307472_1021081971	3300032205	Hardwood Forest Soil	MDDMSDARRDDGIRQAVAARERGRSKVRSTTTTVTVASVVTAGALALA
Ga0335078_115240512	3300032805	Soil	MGYMSRADRDGIRRAIAARERGRDKVRSTTTAVTMASVVAAGALALALPGSTH
Ga0335083_114115031	3300032954	Soil	MSSAQRDRIRRAIAARERGRDKVRSATTTVTVASVVTAGALVLVLPGSAHKTSTGSGSTSTGSSSA
Ga0318519_109011751	3300033290	Soil	MSNAHRDRIRRAIAARETGRAKVRSATTAVTMASVVAAG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F043046

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences