Metagenome / Metatranscriptome Family F042842

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F042842
Family Type	Metagenome / Metatranscriptome
Number of Sequences	157
Average Sequence Length	72 residues
Representative Sequence	GLAGFSWGYVFGILMARKEVLGLGLVASIGYIVAGIWQLGPHWALGALLLAIGAYGLATLALYRRQILEA
Number of Associated Samples	120
Number of Associated Scaffolds	157

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.65 %
% of genes near scaffold ends (potentially truncated)	94.90 %
% of genes from short scaffolds (< 2000 bps)	78.98 %
Associated GOLD sequencing projects	111
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.815 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (24.204 % of family members)
Environment Ontology (ENVO)	Unclassified (35.669 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (41.401 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.18% β-sheet: 0.00% Coil/Unstructured: 40.82%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 157 Family Scaffolds
PF02518	HATPase_c	63.06
PF13188	PAS_8	15.92
PF13365	Trypsin_2	5.73
PF13185	GAF_2	1.91
PF12710	HAD	1.91
PF13492	GAF_3	1.91
PF00005	ABC_tran	1.27
PF07394	DUF1501	1.27
PF08811	DUF1800	0.64
PF00109	ketoacyl-synt	0.64
PF08448	PAS_4	0.64
PF13426	PAS_9	0.64
PF13520	AA_permease_2	0.64

COG ID	Name	Functional Category	% Frequency in 157 Family Scaffolds
COG5267	Uncharacterized conserved protein, DUF1800 family	Function unknown [S]	0.64

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.82 %
Unclassified	root	N/A	3.18 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.82 %
Unclassified	root	N/A	3.18 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.82 %
Unclassified	root	N/A	3.18 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	40.13 %
Unclassified	root	N/A	3.18 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.91 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.64 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	40.13 %
Unclassified	root	N/A	3.18 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.91 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.64 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	38.22 %
Unclassified	root	N/A	3.18 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.91 %
Candidatus Eisenbacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria	0.64 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	38.22 %
Unclassified	root	N/A	3.18 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.91 %
Candidatus Eisenbacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	0.64 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573000\|GPBTN7E02G5K5A	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300002886\|JGI25612J43240_1037593	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300002907\|JGI25613J43889_10129356	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	643	Open in IMG/M
3300002908\|JGI25382J43887_10337293	All Organisms → cellular organisms → Bacteria → Proteobacteria	643	Open in IMG/M
3300005172\|Ga0066683_10725589	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300005174\|Ga0066680_10006082	All Organisms → cellular organisms → Bacteria	5835	Open in IMG/M
3300005174\|Ga0066680_10455672	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300005186\|Ga0066676_10691774	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300005187\|Ga0066675_10547489	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300005336\|Ga0070680_100293546	All Organisms → cellular organisms → Bacteria → Proteobacteria	1378	Open in IMG/M
3300005336\|Ga0070680_101583965	All Organisms → cellular organisms → Bacteria → Proteobacteria	567	Open in IMG/M
3300005440\|Ga0070705_100607148	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300005445\|Ga0070708_101234697	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300005446\|Ga0066686_10464250	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300005446\|Ga0066686_10944910	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	563	Open in IMG/M
3300005446\|Ga0066686_11012623	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	539	Open in IMG/M
3300005450\|Ga0066682_10365306	All Organisms → cellular organisms → Bacteria	928	Open in IMG/M
3300005450\|Ga0066682_10617976	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300005451\|Ga0066681_10038097	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2577	Open in IMG/M
3300005451\|Ga0066681_10111040	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1579	Open in IMG/M
3300005467\|Ga0070706_101876987	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	544	Open in IMG/M
3300005468\|Ga0070707_100089042	All Organisms → cellular organisms → Bacteria	2986	Open in IMG/M
3300005518\|Ga0070699_100771422	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
3300005536\|Ga0070697_100571319	All Organisms → cellular organisms → Bacteria	992	Open in IMG/M
3300005545\|Ga0070695_101502661	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	560	Open in IMG/M
3300005546\|Ga0070696_100021086	All Organisms → cellular organisms → Bacteria	4417	Open in IMG/M
3300005556\|Ga0066707_10007317	All Organisms → cellular organisms → Bacteria	5168	Open in IMG/M
3300005558\|Ga0066698_10128924	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1694	Open in IMG/M
3300005566\|Ga0066693_10063380	All Organisms → cellular organisms → Bacteria	1265	Open in IMG/M
3300005566\|Ga0066693_10164433	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300005890\|Ga0075285_1018831	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	814	Open in IMG/M
3300005895\|Ga0075277_1001807	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2399	Open in IMG/M
3300006034\|Ga0066656_10124183	All Organisms → cellular organisms → Bacteria	1591	Open in IMG/M
3300006049\|Ga0075417_10026037	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2381	Open in IMG/M
3300006791\|Ga0066653_10018435	All Organisms → cellular organisms → Bacteria	2576	Open in IMG/M
3300006797\|Ga0066659_10512720	All Organisms → cellular organisms → Bacteria	963	Open in IMG/M
3300006844\|Ga0075428_100195328	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2188	Open in IMG/M
3300006845\|Ga0075421_100948797	All Organisms → cellular organisms → Bacteria	978	Open in IMG/M
3300006847\|Ga0075431_101776381	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300006852\|Ga0075433_10229610	All Organisms → cellular organisms → Bacteria	1648	Open in IMG/M
3300006852\|Ga0075433_11199135	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	659	Open in IMG/M
3300006854\|Ga0075425_103121468	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	505	Open in IMG/M
3300006871\|Ga0075434_101504943	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	682	Open in IMG/M
3300006871\|Ga0075434_101983225	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300006904\|Ga0075424_102095424	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300009012\|Ga0066710_100287232	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2402	Open in IMG/M
3300009038\|Ga0099829_11169859	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	637	Open in IMG/M
3300009090\|Ga0099827_10249915	All Organisms → cellular organisms → Bacteria	1490	Open in IMG/M
3300009137\|Ga0066709_104237122	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	523	Open in IMG/M
3300009147\|Ga0114129_13314733	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	520	Open in IMG/M
3300009162\|Ga0075423_12858569	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	529	Open in IMG/M
3300010132\|Ga0127455_1177565	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	580	Open in IMG/M
3300010304\|Ga0134088_10186235	All Organisms → cellular organisms → Bacteria	993	Open in IMG/M
3300010320\|Ga0134109_10017958	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2140	Open in IMG/M
3300010320\|Ga0134109_10139163	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300010323\|Ga0134086_10068172	All Organisms → cellular organisms → Bacteria	1226	Open in IMG/M
3300010323\|Ga0134086_10083468	All Organisms → cellular organisms → Bacteria	1114	Open in IMG/M
3300010333\|Ga0134080_10204132	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300010333\|Ga0134080_10485253	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	585	Open in IMG/M
3300010337\|Ga0134062_10546363	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	589	Open in IMG/M
3300010398\|Ga0126383_13315254	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	526	Open in IMG/M
3300011441\|Ga0137452_1036230	All Organisms → cellular organisms → Bacteria	1546	Open in IMG/M
3300011443\|Ga0137457_1311796	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	537	Open in IMG/M
3300012041\|Ga0137430_1239848	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	517	Open in IMG/M
3300012189\|Ga0137388_11747850	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	555	Open in IMG/M
3300012199\|Ga0137383_11107815	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300012200\|Ga0137382_10067429	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2283	Open in IMG/M
3300012200\|Ga0137382_10783615	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	685	Open in IMG/M
3300012201\|Ga0137365_10145777	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1779	Open in IMG/M
3300012206\|Ga0137380_10800102	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	814	Open in IMG/M
3300012206\|Ga0137380_11021488	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300012207\|Ga0137381_10888387	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300012208\|Ga0137376_10112882	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2313	Open in IMG/M
3300012208\|Ga0137376_10724322	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300012208\|Ga0137376_11126048	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	671	Open in IMG/M
3300012208\|Ga0137376_11658464	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	530	Open in IMG/M
3300012211\|Ga0137377_11125533	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300012211\|Ga0137377_11719506	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300012285\|Ga0137370_10621962	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	669	Open in IMG/M
3300012350\|Ga0137372_10000160	All Organisms → cellular organisms → Bacteria	53655	Open in IMG/M
3300012350\|Ga0137372_10062533	All Organisms → cellular organisms → Bacteria	3236	Open in IMG/M
3300012354\|Ga0137366_11214173	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	512	Open in IMG/M
3300012358\|Ga0137368_10436919	All Organisms → cellular organisms → Bacteria	853	Open in IMG/M
3300012361\|Ga0137360_10090936	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2313	Open in IMG/M
3300012362\|Ga0137361_10116252	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2351	Open in IMG/M
3300012362\|Ga0137361_10784270	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300012362\|Ga0137361_11411614	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	619	Open in IMG/M
3300012917\|Ga0137395_10223218	Not Available	1318	Open in IMG/M
3300012918\|Ga0137396_10476425	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	925	Open in IMG/M
3300012922\|Ga0137394_11399176	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	560	Open in IMG/M
3300012927\|Ga0137416_10945500	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	768	Open in IMG/M
3300015053\|Ga0137405_1175681	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	774	Open in IMG/M
3300015053\|Ga0137405_1349961	All Organisms → cellular organisms → Bacteria	1896	Open in IMG/M
3300015241\|Ga0137418_10017701	All Organisms → cellular organisms → Bacteria	6583	Open in IMG/M
3300015358\|Ga0134089_10516378	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300015359\|Ga0134085_10000922	All Organisms → cellular organisms → Bacteria	10527	Open in IMG/M
3300015372\|Ga0132256_100242693	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1867	Open in IMG/M
3300017654\|Ga0134069_1089961	All Organisms → cellular organisms → Bacteria	995	Open in IMG/M
3300017654\|Ga0134069_1108453	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300017659\|Ga0134083_10316819	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300017659\|Ga0134083_10354608	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300018031\|Ga0184634_10326096	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300018059\|Ga0184615_10725568	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	502	Open in IMG/M
3300018071\|Ga0184618_10023498	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2047	Open in IMG/M
3300018071\|Ga0184618_10069798	All Organisms → cellular organisms → Bacteria	1322	Open in IMG/M
3300018071\|Ga0184618_10320931	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	660	Open in IMG/M
3300018071\|Ga0184618_10396409	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300018077\|Ga0184633_10006486	All Organisms → cellular organisms → Bacteria	5433	Open in IMG/M
3300018482\|Ga0066669_10144067	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1741	Open in IMG/M
3300019259\|Ga0184646_1069070	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300019882\|Ga0193713_1008576	All Organisms → cellular organisms → Bacteria	3128	Open in IMG/M
3300020170\|Ga0179594_10190982	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	766	Open in IMG/M
3300021073\|Ga0210378_10023752	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2466	Open in IMG/M
3300021073\|Ga0210378_10024511	All Organisms → cellular organisms → Bacteria	2424	Open in IMG/M
3300021073\|Ga0210378_10026251	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2337	Open in IMG/M
3300021073\|Ga0210378_10106713	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1090	Open in IMG/M
3300022534\|Ga0224452_1171236	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300022756\|Ga0222622_10095770	All Organisms → cellular organisms → Bacteria	1813	Open in IMG/M
3300024330\|Ga0137417_1430509	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1365	Open in IMG/M
3300025289\|Ga0209002_10401967	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300025917\|Ga0207660_10248450	All Organisms → cellular organisms → Bacteria	1404	Open in IMG/M
3300025917\|Ga0207660_11629253	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	520	Open in IMG/M
3300025922\|Ga0207646_11624698	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300026296\|Ga0209235_1165193	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300026298\|Ga0209236_1018910	All Organisms → cellular organisms → Bacteria	3890	Open in IMG/M
3300026306\|Ga0209468_1115903	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300026310\|Ga0209239_1104336	All Organisms → cellular organisms → Bacteria	1198	Open in IMG/M
3300026323\|Ga0209472_1028273	All Organisms → cellular organisms → Bacteria	2588	Open in IMG/M
3300026323\|Ga0209472_1199148	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	685	Open in IMG/M
3300026326\|Ga0209801_1028184	All Organisms → cellular organisms → Bacteria	2680	Open in IMG/M
3300026326\|Ga0209801_1357271	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	514	Open in IMG/M
3300026327\|Ga0209266_1169118	All Organisms → cellular organisms → Bacteria	852	Open in IMG/M
3300026333\|Ga0209158_1136920	All Organisms → cellular organisms → Bacteria	905	Open in IMG/M
3300026333\|Ga0209158_1222865	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	650	Open in IMG/M
3300026528\|Ga0209378_1019236	All Organisms → cellular organisms → Bacteria	3845	Open in IMG/M
3300026528\|Ga0209378_1031060	All Organisms → cellular organisms → Bacteria	2813	Open in IMG/M
3300026548\|Ga0209161_10391755	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	612	Open in IMG/M
3300027490\|Ga0209899_1035587	All Organisms → cellular organisms → Bacteria	1069	Open in IMG/M
3300027655\|Ga0209388_1073080	All Organisms → cellular organisms → Bacteria	988	Open in IMG/M
3300027671\|Ga0209588_1220629	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	586	Open in IMG/M
3300027846\|Ga0209180_10625862	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300027909\|Ga0209382_11729203	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300028720\|Ga0307317_10071002	All Organisms → cellular organisms → Bacteria	1135	Open in IMG/M
3300028819\|Ga0307296_10501798	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	664	Open in IMG/M
3300031015\|Ga0138298_1324201	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	513	Open in IMG/M
3300031199\|Ga0307495_10013211	Not Available	1261	Open in IMG/M
3300031226\|Ga0307497_10384754	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300031538\|Ga0310888_10736030	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300031720\|Ga0307469_11651399	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300031820\|Ga0307473_10184271	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	1224	Open in IMG/M
3300031965\|Ga0326597_11804961	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	573	Open in IMG/M
3300032180\|Ga0307471_102151588	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300033417\|Ga0214471_10506209	All Organisms → cellular organisms → Bacteria	965	Open in IMG/M
3300033815\|Ga0364946_101241	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.08%
Host-Associated	Host-Associated	8.92%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.25%
Aquatic	Environmental → Aquatic	10.83%
Plants	Host-Associated → Plants	8.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.62%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.92%
Sediment	Environmental → Aquatic → Sediment	7.64%
Freshwater	Environmental → Aquatic → Freshwater	3.18%
Floodplain	Environmental → Terrestrial → Floodplain	0.64%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	69.43%
Loam	Environmental → Terrestrial → Soil → Loam	8.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.28%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.64%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.18%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.27%
Sand	Environmental → Terrestrial → Soil → Sand	0.64%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.64%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.64%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	38.85%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	26.11%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.28%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.64%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.18%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.18%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.27%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.64%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.64%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.64%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.64%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	24.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	19.75%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	9.55%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.28%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.73%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.73%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.82%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	3.18%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.55%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.55%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.91%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.27%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.64%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.64%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.64%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.64%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.64%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.64%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573000	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis 0-21cm (T0 for microcosms)	Environmental	Open in IMG/M
3300002886	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm	Environmental	Open in IMG/M
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005890	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_104	Environmental	Open in IMG/M
3300005895	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_101	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010132	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011441	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT513_2	Environmental	Open in IMG/M
3300011443	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT630_2	Environmental	Open in IMG/M
3300012041	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT754_2	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018059	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025289	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 2	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027490	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300031015	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A9_MS_autumn Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033417	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155	Environmental	Open in IMG/M
3300033815	Sediment microbial communities from East River floodplain, Colorado, United States - 31_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
N55_04677650	2189573000	Grass Soil	YVFGVLMARKEVVALGVVASLGYAAAGVWQLGIDWRLGLLLLAIGGYGLAVLSLYRRRILEA
JGI25612J43240_10375931	3300002886	Grasslands Soil	AGFSWGYVFGILMARKEVIGLGLVASIGYIVAGIWQLGPHWALGVLLLAIGAYGLATLALYRRQILEA*
JGI25613J43889_101293561	3300002907	Grasslands Soil	FPNAVIFLGLAGFSWGYVFGILMARKEVIGLGLVASIGYIVAGIWQLGPHWALGVLLLAIGAYGLATLALYRRQILEA*
JGI25382J43887_103372931	3300002908	Grasslands Soil	RKEVLGLGLVASVGYVAAGIWQLGPHWALGALLLAIGAYGLAALALYRRQILEA*
Ga0066683_107255891	3300005172	Soil	GVVFLAIAGFSWGYVFGVLMARKEVVALGVVASLAYVAAGVWQLGLDWRLGLLLLAIGAYGLAMLSLYRRRILEA*
Ga0066680_100060821	3300005174	Soil	CAFAGSLNLIDPTKIFPNAVIFLGLAGFSWGYVFGILMARKEVLALGLLASIGYIVAGIWQLGPHWALGALLLAIGVYGLAALALYRRQILEA*
Ga0066680_104556721	3300005174	Soil	CAFAGSLNLIDPTKIFPNAVIFLGLAGFSWGYVFGILMARKEVIGLGLVASIGYIVAGIWQLGPHWALGALLLAIGVYGLAALALYRRQILEA*
Ga0066676_106917742	3300005186	Soil	VVALGLVASLAYVAAGVWQLGADWRFGALLLGIGVYGLATLALYRRRILEA*
Ga0066675_105474892	3300005187	Soil	MARKEVLGLGLVASIGYIAAGIWQLGPHWALGALLLAIGVYGLAALALYRRQILEA*
Ga0070680_1002935461	3300005336	Corn Rhizosphere	YVFGILMARKEVIAMGLLASIGYIVAGIWLLGPHWALGALLLAVGAYGLATLALYRRRILEA*
Ga0070680_1015839651	3300005336	Corn Rhizosphere	NLIDPTKIIPNAVIFLGLAAFSWGYVFGILMARKEVVALGAVASIGYIAAGIWQLGPHWALGALLLAIGVYGLATIALYRKTIIEA*
Ga0070705_1006071481	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	YVFGILMARKEVLGLGLVASIGYIAAGIWQLGPHWALGALLLAIGVYGLAALALYRRQILEA*
Ga0070708_1012346971	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	PNALVFLGLAGFSWGYVFGILMARKEVLGMGLVASIGYVAAGIWQLGPHWALGAVLLAIGVYGLATLALYRKRILEA*
Ga0066686_104642501	3300005446	Soil	GFSWGYVFGILMARKEVLGLGLVASIGYIVAGIWQLGPHWALGALLIAIGAYGVAALALYRRQILEA*
Ga0066686_105993211	3300005446	Soil	ALGFVASVAYAVVGLWKLGADWRLGALLLAIGVYGAITLAYYRRRILEG*
Ga0066686_109449102	3300005446	Soil	FAGGLNLIDPTKIIPNAVIFLGLAGFSWGYVFGILMARKEVLALGVVASVGYIVAGIWQLGPHWALGALLLAIGAYGLAALALYRRQILEA*
Ga0066686_110126232	3300005446	Soil	GFSWGYVFGILMARKEVLGLGLVASIGYIVAGIWQLGPHWALGVLLLAIGAYGLAALALYRRQILEA*
Ga0066682_103653062	3300005450	Soil	LMARKEVLGLGLVASIGYIVAGIWQLGPHWALGALLLAIGVYGLAALALYRRQILEA*
Ga0066682_106179762	3300005450	Soil	LAGFSWGYVFGILMARKEVLALGVVASVGYIVAGIWQLGPHWALGALLLAVGAYGLAALALYRRQILEA*
Ga0066681_100380971	3300005451	Soil	LNLIDPTKIFPNAVIFLGLAGFSWGYVFGILMARKEVLGLGLVASIGYIVAGIWQLGPHWALGVLLLAIGAYGLATLALYRRQILEA*
Ga0066681_101110402	3300005451	Soil	FGILMARKEVLGLGLVASIGYVAAGIWQLRPHWALGALLLAIGAYGLAALALYRRQILEA
Ga0070706_1018769871	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	GGLNLIDPTKILPNAVIFLGLAGFSWGYVFGILMARKEVLGLGLVASLGYIGAGIWQLGPHWSLGVLLLAIGAYGLGTLALYRRQILEA*
Ga0070707_1000890421	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	CAFAGGLNLIDPTKIFPNAVIFLGLAGFSWGYVFGILMARKEVLGLGLVASIGYIAAGIWQLGPHWALGALLLAIGVYGLAALALYRRQILEA*
Ga0070699_1007714222	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	LMARKEVIAMGVVASAGYVGAGVWQIGVDWRLGVLLIAIGAYGLATLSMYRRRILEA*
Ga0070697_1005713192	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	YVFGILMARKEVIALGLVASIGYVVAGIWQLGPHWALGALLLAIGLYGLAALALYRRQILEA*
Ga0070695_1015026611	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	AFAGGLNLIDPTKIIPNAVIFLGLAAFSWGYVFGILMARKEVVALGAVASIGYIAAGIWQLGPHWALGALLLAIGVYGLATIALYRKTIIEA*
Ga0070696_1000210864	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VFGILMARKEVVALGVLASLGYAAAGVWQLGVDWRFGVLLLAIGAYGLATLSLYRRRILEA*
Ga0066707_100073171	3300005556	Soil	KEVLGLGVVASIGYIVAGIWQLGPHWALGALLLAIGVYGLAALALYRRQILEA*
Ga0066698_101289241	3300005558	Soil	GVLMARKEVLGLGLVASIGYIVAGIWQLGPHWALGALLLAIGVYGLAALALYRRQILEA*
Ga0066693_100633801	3300005566	Soil	PNAVIFLGLCGFSWGYVFGILMARKEVLALGFIASAGYILAGIWQLGPHWALGALLLAIGVYGLATLALYRRQILEA*
Ga0066693_101644331	3300005566	Soil	IAGFSWGYVFGVLMARKEVIAMGVVASAAYVGAGVWQLGVDWRLGVLLMVIGAYGLATLSLYRRRILEA*
Ga0075285_10188312	3300005890	Rice Paddy Soil	SWGYVFGILMARKEVIALGFVASIGYIAAGIWQLGPHWALGALLLAIGVYGLATLALYRRQIVEA*
Ga0075277_10018071	3300005895	Rice Paddy Soil	AGGLNLIDPTKIFPNAVIFLGLCGFSWGYVFGILMARKEVIALGFVASIGYIAAGIWQLGPHWALGALLLAIGVYGLATLALYRRQIVEA*
Ga0066656_101241832	3300006034	Soil	YVFGILMARKEVLGLGLVASIGYIVAGIWQLGPHWALGALLLAIGVYGLAALALYRRQILEA*
Ga0075417_100260373	3300006049	Populus Rhizosphere	TKIFPNAVIFLGLAGFSWGYVFGILMARKEVLGLGLVASIGYIVAGIWQMGPHWALGALLLAIGVYGLAALALYRRQILEA*
Ga0066653_100184351	3300006791	Soil	TKIFPNAVIFLGLAGFSWGYVFGVLMARKEVLGLGLVASIGYIVAGIWQLGPHWALGALLLAIGVYGLAALALYRRQILEA*
Ga0066659_105127201	3300006797	Soil	NAIIFLGLAGFSWGYVFGILMARKEVLGLGLVASIGYIGAGLWQLGPHWSLGVLLLAIGAYGLATLALYRRQILEA*
Ga0075428_1001953282	3300006844	Populus Rhizosphere	FAGGLNLIDPTKIFPNGVVFLAIAGFSWGYVFGVLMARKEVIAMGVIASAGYVGAGVWQLGVDWRLGALLMAIGVYGLATLSMYRRRILEA*
Ga0075421_1009487972	3300006845	Populus Rhizosphere	AGGLNLIDPTKIFPNGVVFLAIAGFSWGYVFGVLMARKEVVAMGIVASLGYVAAGVWQLGVDWRLGALLLAIGAYGLATLSLYRRRILEA*
Ga0075431_1017763812	3300006847	Populus Rhizosphere	LMARKEVLGMGLVASLGYIAAGIWQLGPHWSLGVLLIAIGAFGLATLALYRRQIMEA*
Ga0075433_102296101	3300006852	Populus Rhizosphere	ALCGFSWGYVFGILMARKEVVAMGFAASAGYLAAGVWQINVDWRLGALLLAVGAYGIATLALYRRQIVAS*
Ga0075433_111991352	3300006852	Populus Rhizosphere	LNLIDPTKIFPNGVIFLAIAGFSWGYVFGILMARKEVIAMGVVASIGYAAAGVWQLGIDWRLGVLLIAIGAYGLAVLSMYRRRILEA*
Ga0075425_1031214682	3300006854	Populus Rhizosphere	TKIFPNAVIFLGLAGFSWGYVFGILMARKEVLGLGLVASIGYIVAGIWQMGPHWALGALLLAIGAYGLAALALYRRQILEA*
Ga0075434_1015049432	3300006871	Populus Rhizosphere	NLIDPTKIFPNGVVFLAIAGFSWGYVFGVLMARKEVVALGVVASAGYVGAGVWQLGIDWRLGLLLIAIGAYGLAVLSLYRRRILEA*
Ga0075434_1019832251	3300006871	Populus Rhizosphere	MARKEVLGLGLVASLGYIGAGIWQLGPHWSLGVLLLAIGAYGLGTLALYRRQILEA*
Ga0075424_1020954242	3300006904	Populus Rhizosphere	KIFPNGVVFLAIAGFSWGYVFGVLMARKEVVALGVVASAGYVGAGVWQLGIDWRLGLLLIAIGAYGLAVLSLYRRRILEA*
Ga0066710_1002872323	3300009012	Grasslands Soil	GFSWGYVFGILMARKEVLAMGLVASIGYVAAGIWQLGPHWALGALLLAIGAYGLATLALYRRRILEA
Ga0099829_111698592	3300009038	Vadose Zone Soil	CAFAGGLNLIDPTKIFPNAIIFLGLAGFSWGYVFGILMARKEVLGLGLVASVGYIVAGIWQLGPHWALGALLLAIGVYGLAALALYRRQILEA*
Ga0099827_102499152	3300009090	Vadose Zone Soil	FLGLAGFSWGYVFGILMARKEVLGLGVLASIGYIVAGIWQLGPHWTLGALLLAIGAYGLATLAMYRRQILEA*
Ga0066709_1042371221	3300009137	Grasslands Soil	VIFLGLAGFSWGYVFGILMARKEVLGLGLVASIGYIVAGIWQLGPHWALGVLLLAIGAYGLAALALYRRQILEA*
Ga0114129_133147331	3300009147	Populus Rhizosphere	PNGVVFLAIAGFSWGYVFGVLMARKEVIAMGVVASAGYVGAGVWQLGVDWRVGVLLIAIGAYGLATLSMYRRRILEA*
Ga0075423_128585692	3300009162	Populus Rhizosphere	AGFSWGYVFGILMARKEVLGLGLVASIGYIVAGIWQMGPHWALGALLLAIGVYGLAALALYRRQILEA*
Ga0127455_11775651	3300010132	Grasslands Soil	ALIFLGLAGFSWGYVFGILMARKEVLAMGLVASIGYVAAGIWQLGPHWALGALLLAIGAYGLATLALYRRRILEA*
Ga0134088_101862351	3300010304	Grasslands Soil	FLGLAGFSWGYVFGILMARKEVLGLGLVASIGYIVAGIWQLGPHWALGALLIAIGAYGVAALALYRRQILEA*
Ga0134109_100179581	3300010320	Grasslands Soil	IFLGLAGFSWGYVFGILMARKEVLGLGLVASIGYVVAGIWQLGPHWALGALLLAIGAYGLAALALYRRQILEA*
Ga0134109_101391632	3300010320	Grasslands Soil	YVFGILMARKEVLALGVVASVGYIVAGIWQLGPHWALGALLLAIGAYGLAALALYRRQILEA*
Ga0134086_100681721	3300010323	Grasslands Soil	LIFLGLAGFSWGYVFGILMARKEVLAMGLVASIGYVAAGIWQLGPHWALGALLLAIGAYGLATLALYRRRILEA*
Ga0134086_100834681	3300010323	Grasslands Soil	IFLGLAAFSWGYVFGILMARKEVVGLGVVASVGYVVAGIWQLGPHWALGALLLAIGAYGLATIALYRRRILEA*
Ga0134080_102041322	3300010333	Grasslands Soil	VIFLGLAGFSWGYVFGILMARKEVLGLGLVASIGYIVAGIWQRGPHWALGALLLAIGAYGLATLALYRRQILEA*
Ga0134080_104852532	3300010333	Grasslands Soil	IDPTKIFPNGVVFLAIAGFSWGYVFGILMARKEVVALGLVASLAYVAAGVWQLGADWRFGALLLGIGVYGLATLALYRRRILEA*
Ga0134062_105463632	3300010337	Grasslands Soil	DPTKIIPNAVIFLGLAAFSWGYVFGILMARKEVVGLGVVASVGYVVAGIWQLGPHWALGALLLAIGAYGLATLALYRRRILEA*
Ga0126383_133152541	3300010398	Tropical Forest Soil	NAVIFLGLAVFSWGYVFGILMARKEVLGLGLVASIGYIVAGIWQLGPHWALGVLLLAIGAYGLAALALYRRQILEA*
Ga0137452_10362302	3300011441	Soil	SWGYVFGILMARKEVLGMGLVASLGYIAAGIWQLGPHWPLGALLLAIGAYGLATLALYRRQILEA*
Ga0137457_13117962	3300011443	Soil	AGGLNLIDPTKIFPNAAIFLGLAGFSWGYVFGILMARKEVLGMGLIASLGYVAAGIWQLGPHWPLGALLLAIGAYGLATLALYRRQILEA*
Ga0137430_12398482	3300012041	Soil	WGYVFGILMARKEVLGMGLVASLGYIAAGIWQLGPHWPLGALLLAIGAYGLATLALYRRQILEA*
Ga0137388_117478502	3300012189	Vadose Zone Soil	LNLIDPSKIFPNAVIFLGLAGFSWGYVFGILMARKEVLGLGLVASIGYIVAGIWQLGPHWALGALLLAIGAYGLAALALYRRQIIEA*
Ga0137383_111078151	3300012199	Vadose Zone Soil	KEVLAMGLVASIGYVAAGIWQLGPHWALGALLLAIGAYGLATLALYRRRILEA*
Ga0137382_100674292	3300012200	Vadose Zone Soil	FGILMARKEVLGLGLVASIGYIVAGIWQLGPHWALGVLLLAIGAYGLAALALYRRQILEA
Ga0137382_107836152	3300012200	Vadose Zone Soil	AGSLNLIDPTKIFPNAVIFLGLAGFSWGYVFGILMARKEVLGLGLLASIGYVAAGIWQLRPHWPLGALLLAIGVYGLAAIALYRRRILEA*
Ga0137365_101457772	3300012201	Vadose Zone Soil	KIFPNAVIFLGLAGFSWGYVFGILMARKEVLGLGLLASIGYVAAGIWQLGPHWPLGALLLAIGVYGLAAIALYRRQILEA*
Ga0137380_108001022	3300012206	Vadose Zone Soil	PNALIFLGLAGFSWGYVFGILMARKEVLAMGLVASIGYVAAGIWQLGPHWALGALLLAIGAYGLATLALYRRRILEA*
Ga0137380_110214882	3300012206	Vadose Zone Soil	MARKEVVALGVVASLAYVAAGVWQLGLDWRLGILLLAIGAYGLAMLSLYRRRILEA*
Ga0137381_108883872	3300012207	Vadose Zone Soil	LGLAGFSWGYVFGILMARKEVLGLGVVASIGYIVAGIWQLGPHWALGALLLAIGVYGLATLALYRRQILEA*
Ga0137376_101128822	3300012208	Vadose Zone Soil	PNAVIFLGLAGFSWGYVFGILMARKEVLGLGLVASIGYIVAGIWQLGPHWALGALLLAIGAYGLATLALYRRQILEA*
Ga0137376_107243222	3300012208	Vadose Zone Soil	GILMARKEVLGLGLVASIGYIVAGLWQLGPHWALGVLLLAIGAYGLATLALYRRQILEA*
Ga0137376_111260481	3300012208	Vadose Zone Soil	KIFPNAVIFLGLAGFSWGYVFGILMARKEVLGLGLLASIGYVAAGIWQLRPHWPLGALLLAIGVYGLAAIALYRRRILEA*
Ga0137376_116584642	3300012208	Vadose Zone Soil	GLNLIDPTKIFPNAVIFLGLAGFSWGYVFGILMARKEVLGLGLVASIGYVAAGIWQLGPHWALGALLLAIGAYGLAALALYRRQILEA*
Ga0137377_111255332	3300012211	Vadose Zone Soil	LAGFSWGYVFGILMARKEVLALGLVASVGYVVAGIWQLGAHWALGALLLAIGVYGLAALALYRRQILEA*
Ga0137377_117195062	3300012211	Vadose Zone Soil	KEVLGLGLVASIGYVVAGIWQLGPHWALGALLLAIGIYGLAALALYRRRILEA*
Ga0137370_106219622	3300012285	Vadose Zone Soil	VMFLAVAGFSWGYVFGILMARKEVVALGVLASLGYAAAGVWQLGIDWRFGVLLLAIGAYGLATLSLYRRRILDA*
Ga0137372_100001601	3300012350	Vadose Zone Soil	NLIDPTKIFPNAVIFLGLAGFSWGYVFGILMARKEVLGLGLLASIGYVAAGIWQLGPHWPLGALLLAIGVYGLAAIALYRRQILEA*
Ga0137372_100625333	3300012350	Vadose Zone Soil	FAGGLNLIDPTKIFPNAVIFLVLAGFSWGYVFGILMARKEVLGLGLVASIGYVAAGIWQLGPHWALGALLLAIGAYGLAALALYRRQILEA*
Ga0137366_112141732	3300012354	Vadose Zone Soil	GLAGFSWGYVFGILMARKEVLGLGLVASIGYIVAGIWQLGPHWALGALLLAIGAYGLATLALYRRQILEA*
Ga0137368_104369191	3300012358	Vadose Zone Soil	TKIFPNAVIFLVLAGFSWGYVFGILMARKEVLGLGLIASIGYIVAGIWQLGPHWSLGALLLAIGAYGLATLALYRRQILEA*
Ga0137360_100909361	3300012361	Vadose Zone Soil	VLGLGLVASIGYVVAGIWQLGPHWALGVLLLAIGAYGLAALALYRRQILEA*
Ga0137361_101162523	3300012362	Vadose Zone Soil	VFGILMARKEVLGLGLVASVGYVVAGIWQLGPHWALGALLLAIGVYGLAALALYRRQILEA*
Ga0137361_107842702	3300012362	Vadose Zone Soil	LMARKEVLGLGLVASIGYIVAGIWQLGPHWALGVLLLAIGAYGLAALALYRRQILET*
Ga0137361_114116142	3300012362	Vadose Zone Soil	FAGSLNLIDPTKIFPNAVIFLGLAGFSWGYVFGILMARKEVLGLGLVASIGYIVAGIWQLGPHWALGALLHAIGVYGLAALALYRRQILEA*
Ga0137373_111607722	3300012532	Vadose Zone Soil	LGLVASIGYVAAGIWQLGPHWALGALLLAIGAYGLAALALYRRQILEA*
Ga0137395_102232181	3300012917	Vadose Zone Soil	EVLGLGLVASIGYIAAGIWQLGPHWALGALLLAIGAYGLAALALYRRQILEA*
Ga0137396_104764252	3300012918	Vadose Zone Soil	GLNLIDPTKIFPNAVIFLGLCAFSWGYVFGILMARKEVLGLGLVASIGYIVAGIWQLGPHWALGVLLLAIGAYGLAALALYRRQILEA*
Ga0137394_113991761	3300012922	Vadose Zone Soil	LGLAGFSWGYVFGILMARKEVIGLGLVASIGYIVAGIWQLGPHWALGVLLLAIGAYGLATLALYRRQILEA*
Ga0137416_109455002	3300012927	Vadose Zone Soil	FCAFAGGLNLIDPSKIFPNAVIFLGLAGFSWGYVFGILMARKEVLGLGLIASVGYVVAGIWQLGPHWALGALLLAIGVYGLAALALYRRQILEA*
Ga0137405_11756812	3300015053	Vadose Zone Soil	NLIDPSKIFPNAVIFLGLAGFSWGYVFGILMARKEVIGLGLVASIGYIVAGIWQLGPHWALGVLLLAIGAYGLATLALYRRQILEA*
Ga0137405_13499612	3300015053	Vadose Zone Soil	MARKEVVALGVLASLGYAAAGVWQLGIDWRFGVLLLAIGAYGLATLSLYRRRILEA*
Ga0137418_100177011	3300015241	Vadose Zone Soil	KIFPNAVIFLGLAGFSWGYVFGILMARKEVIGLGLVASIGYIVAGIWQLGPHWALGVLLLAIGAYGLATLALYRRQILEA*
Ga0134089_105163781	3300015358	Grasslands Soil	VFGILMARKEVVGLGVVASVGYIVAGIWQLGPHWALGALLLAIGAYGLATLALYRRRILEA*
Ga0134085_1000092210	3300015359	Grasslands Soil	RKEVLGLGLVASIGYVVAGIWQLGPHWALGALLLAIGIYGLAALALYRRRILEA*
Ga0132256_1002426932	3300015372	Arabidopsis Rhizosphere	AGGLNLIDPVKIIPNAIIFLGLAGFSWGYVFGILMARKEVLGLGMLASLGYIAAGIWQLGPRWPLGALLLAIGVYGLATIVLYRPQILEA*
Ga0134069_10899612	3300017654	Grasslands Soil	LAGFSWGYVFGVLMARKEVLGLGLVASIGYIVAGIWQLGPHWALGALLLAIGVYGLAALALYRRQILEA
Ga0134069_11084532	3300017654	Grasslands Soil	AAFSWGYVFGILMARKEVVGLGVVASVGYVVAGIWQLGPHWALGALLLAIVAYGLATLALYRRRILEA
Ga0134083_103168192	3300017659	Grasslands Soil	FGILMARKVVLGLGLVASIGYIVAGIWQLGPHWALGVLLLAIGAYGLAALALYRRQILEA
Ga0134083_103546081	3300017659	Grasslands Soil	AGFSWGYVFGILMARKEVLGLGLVASIGYIGAGLWQLGPHWSLGVLLLAIGAYGLATLALYRRQILEA
Ga0184634_103260962	3300018031	Groundwater Sediment	MARKEVLALGLIASGAYVAAGLWKIAPDWRLGVLLLAIGLYGFATLALYRRRILEA
Ga0184615_107255682	3300018059	Groundwater Sediment	AGFSWGYVFGILMARKEVLALGVVAGLGYAAAGVWQLGADWRLGVLLLAIGAYGLATLAVYRRRILEA
Ga0184618_100234981	3300018071	Groundwater Sediment	GLNLIDPTKIFPNGVVFLAIAGFSWGYVFGVLMARKEVVALGVVASLGYAAAGVWQLGVDWRFGVLLMVIGAYGLVTLSFYRRRILEA
Ga0184618_100697982	3300018071	Groundwater Sediment	WGYVFGILMARREVVALGVVASLGYAAAGVWQLGADWRLGMLLLLIGGSGLATLAAYRRRILEA
Ga0184618_103209312	3300018071	Groundwater Sediment	FAGGLNLIDPTKIIPNAVIFLGLAGFSFGYVFGILMARKEVLGLGLVASIGYIVAGIWQLGPHWALGALLLAIGAYGLATLALYRRQILEA
Ga0184618_103964092	3300018071	Groundwater Sediment	FSFGYVFGILMARKEVLGLGLVASIGYIVAGIWQLGPHWALGALLLAIGAYGLATLALYRRQILEA
Ga0184633_100064866	3300018077	Groundwater Sediment	VLMARKEVLALGLAASLAYVAAGLWKIGPDWRLGALLLAIGIYGLATLALYRNRILEA
Ga0066669_101440672	3300018482	Grasslands Soil	AGGLTLIDSTKIIPSAVIFLALAGFSWGYVFGILMARKEVLALGVVASVGYIVAGIWQLGPHWALGALLLAIGAYGLAALALYRRQILEA
Ga0184646_10690702	3300019259	Groundwater Sediment	VLMARKEVVALGVVASLGYAAAGVWQLGADWRLGVLLIAIGAYGLATLSMYRRRILEA
Ga0193713_10085763	3300019882	Soil	GLNLIDPTKIFPNGVVFLAIAGFSWGYVFGVLMARKEVVALGVLASLGYAAAGVWQLGVDWRFGVVLLAIGVYGLATLSLYRRRILEA
Ga0179594_101909822	3300020170	Vadose Zone Soil	GGLNLIDPTKIFPNAVIFLGLAGFSWGYVFGILMARKEVLGLGLLASIGYVVAGIWQLGPHWPLGALFLAIGVYGLAAIALYRRQILEA
Ga0210378_100237523	3300021073	Groundwater Sediment	AIAGFSWGYVFGILMARKEVVALGVVASLGYVAAGVWQLGANWQLGALLLVIGAYGLGTLSVYRRRILEA
Ga0210378_100245113	3300021073	Groundwater Sediment	AGFSWGYVFGILMARKEVLGLGLVASIGYIVAGIWQLGPHWALGVLLLAIGAYGLATLALYRRQILEA
Ga0210378_100262512	3300021073	Groundwater Sediment	SGLNLIDPTKIFPNGVVFLAIAGFSWGYVFGVLMARKEVVALGVVASLGYAAAGVWQLGVDWRFGVLLMVIGAYGLVTLSFYRRRILEA
Ga0210378_101067132	3300021073	Groundwater Sediment	LNLIDPTKIFPNGVVFLAIAGFSWGYVFGILMARKEVVALGVVASLGYVAAGVWQLGVDWRFGVLLMVIGAYGLATLSVYRRRILEA
Ga0224452_11712362	3300022534	Groundwater Sediment	LFCAFAGGLNLIDPTKIFPNGVVFLAIAGFSWGYVFGVLMARKEVVALGVVASLGYAAAGVWQLGVDWRFGVLLMVIGAYGLVTLSFYRRRILEA
Ga0222622_100957701	3300022756	Groundwater Sediment	IFPNGVVFLAIAGFSWGYVFGVLMARKEVVALGVVASLGYAAAGVWQLGVDWRFGVLLMVIGAYGLVTLSFYRRRILEA
Ga0137417_14305092	3300024330	Vadose Zone Soil	MARKEVLGLGLVASIGYIAAGIWQLGPHWALGALLLAIGAYGLAALALYRRQILEA
Ga0209002_104019671	3300025289	Soil	NAVAFLVLAGFSWGYVFGILMARKEVLALGMVAGLGYAAAGVWQLGADWRLGVLLLAIGAYGLATLAVYRRRILEA
Ga0207660_102484501	3300025917	Corn Rhizosphere	YVFGILMARKEVIAMGLLARIGYIVAGIWLLGPHWALGALLLAVGAYGLATLALYRRRILEA
Ga0207660_116292532	3300025917	Corn Rhizosphere	GVVFLAIAGFSWGYVFGVLMARKEVIAMGVVASAGYVGAGVWQIGVDWRLGVLLIAIGAYGLATLSMYRRRILEA
Ga0207646_116246981	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VVFLAIAGFSWGYVFGVLMARKEVIAMGVVASAGYVGAGVWQIGVDWRLGVLLIAIGAYGLATLSMYRRRILEA
Ga0209235_11651931	3300026296	Grasslands Soil	IFLGLAGFSWGYVFGILMARKEVLGLGLVASVGYVVAGIWQLRPHWALGALLLAIGVYGLAALALYRRQILEA
Ga0209236_10189104	3300026298	Grasslands Soil	IFLGLAGFSWGYVFGILMARKEVLAMGLVASIGYVAAGIWQLGPHWALGALLLAIGAYGLATLALYRRRILEA
Ga0209468_11159032	3300026306	Soil	SWGYVFGILMARKEVLALGVVASVGYIVAGIWQLGPHWALGALLLAIGAYGLAALALYRRQILEA
Ga0209239_11043361	3300026310	Grasslands Soil	LMARKEVLGLGLAASIGYLLAGIWQLGPHWALGALLLAIGVYGLATLAVYRRRILEA
Ga0209472_10282733	3300026323	Soil	WGYVFGILMARKEVLGLGLVASIGYIVAGIWQLGPHWALGVLLLAIGAYGLATLALYRRQILEA
Ga0209472_11991482	3300026323	Soil	AFAGGLNLIDPTKIFPNAVIFLGLAGFSWGYVFGILMARKEVLGLGLVASIGYVAAGIWQLRPHWALGALLLAIGAYGLAALALYRRQILEA
Ga0209801_10281841	3300026326	Soil	MARKEVLALGLLASIGYLVAGIWQLGPHWALGALLLAIGVYGLAALALYRRQILEA
Ga0209801_13572712	3300026326	Soil	LGLAGFSWGYVFGILMARKEVLGLGLVASIGYIVAGIWQLGPHWALGVLLLAIGAYGLAALALYRRQILEA
Ga0209266_11691182	3300026327	Soil	CAFAGGLNLIDPTKIFPNGVVFLAIAGFSWGYVFGILMARKEVVALGLVASLAYVAAGVWQLGADWRFGALLLGIGVYGLATLALYRRRILEA
Ga0209158_11369201	3300026333	Soil	FGILMARKEVLGLGLVASIGYIGAGIWQLGPHWALGVLLLVIGAYGVAALALYRRQILEA
Ga0209158_12228652	3300026333	Soil	NLIDPTKIIPNAVIFLGLAAFSWGYVFGILMARKEVVGLGVVASVGYIVAGIWQLGPHWALGALLLAIGAYGLATLALYRRRILEA
Ga0209378_10192364	3300026528	Soil	VFGILMARKEVLGLGVVASIGYIVAGIWQLGPHWALGALLLAIGVYGLAALALYRRQILE
Ga0209378_10310601	3300026528	Soil	LMARKEVLAMGLVASIGYVAAGIWQLGPHWALGALLLAIGAYGLATLALYRRRILEA
Ga0209161_103917551	3300026548	Soil	GLNLIDPTKIIPNAIIFLGLAGFSWGYVFGILMARKEVLGLGLVASIGYIGAGLWQLGPHWSLGVLLLAIGAYGLATLALYRRQILEA
Ga0209899_10355872	3300027490	Groundwater Sand	VLILIAQVLALGLVASLAYVAAGLWKIGPDWKLGALLLAIGLYGFTMLALYRRRILEA
Ga0209388_10730802	3300027655	Vadose Zone Soil	SWGYVFGILMARKEVLGLGLVASISYIVAGIWQLGPHWALGVLLLAIGAYGLAALALYRRQILEA
Ga0209588_12206292	3300027671	Vadose Zone Soil	GLNLIDPTKIFPNAVIFLGLCAFSWGYVFGILMARKEVLGLGLVASIGYIVAGIWQLGPHWALGVLLLAIGAYGLAALALYRRQILEA
Ga0209180_106258621	3300027846	Vadose Zone Soil	GLAGFSWGYVFGILMARKEVLGLGLVASVGYIVAGIWQLGPHWALGALLLAIGVYGLAALALYRRQILEA
Ga0209382_117292032	3300027909	Populus Rhizosphere	TKIFPNGVVFLAIAGFSWGYVFGVLMARKEVIAMGVVASAGYVGAGVWQLGVDWRVGVLLIAIGAYGLATLSMYRRRILEA
Ga0307317_100710021	3300028720	Soil	AIAGVSWGYVFGVLMARKEVIAMGVVASAGYVGVGVWQLGVDWRLGVLLIAIGAYGLATLSMYRRRILEA
Ga0307296_105017982	3300028819	Soil	PNAVIFLGLAGFSWGYVFGILMARKEVLGLGLVASIGYIVAGIWQLGPHWALGALLLAIGVYGLATLALYRRQILAA
Ga0138298_13242011	3300031015	Soil	PNAVIFLGLAGFSWGYVFGILMARKEVVGLGVLASIGYIVAGIWQLGPHWTLGALLLAIGAYGLGTLALYRRRILEA
Ga0307495_100132112	3300031199	Soil	LMARKEVLGLGLLASLGYVAAGIWQLGPRWPLGALLLAIGVYGLATLALYRRQILEA
Ga0307497_103847542	3300031226	Soil	GFSWGYVFGILMARKEVLALGVVASVGYIVAGIWQLGPHWALGALLLAIGAYGLAALALYRRQILEA
Ga0310888_107360302	3300031538	Soil	IPNAIIFLALAGFSWGYVFGILMARKEVLGMGLLASLGYVAAGIWQLGPRWPLGALLLAIGVYGLATIVLYRRQILEA
Ga0307469_116513991	3300031720	Hardwood Forest Soil	MARKEVVGLGVVASIGYVVAGIWQLGPHWALGALLLAIGAYGLATLALYRRRILEA
Ga0307473_101842712	3300031820	Hardwood Forest Soil	TKIIPNAVIFLGLAAFSWGYVFGILMARKEVVGLGVVASIGYVVAGIWQLGPHWALGALLLAIGAYGLATLALYRRRILEA
Ga0326597_118049611	3300031965	Soil	AGGLNLIDPAKILPNGVPFLLLAGFSWGYVFGILMARKEVLMLGVVAGVGYVAAGVWQLGTDWRLGALLLAIGVYGLATLAVYRRRILEA
Ga0307471_1005665072	3300032180	Hardwood Forest Soil	VCVFSWGYVFGILMGRKEVLALGFLASAVYVAAGLWQFGADWRLGALLGGIGLYGLAALAYYRGKILA
Ga0307471_1021515882	3300032180	Hardwood Forest Soil	GLAGFSWGYVFGILMARKEVLGLGLIASLGYVAAGIWQLGPHWALGALLLAIGVYGLATLALYRRQILEA
Ga0214471_105062091	3300033417	Soil	RKEVVGMGLIASLGYIAAGIWQLGPRWPLGALLLAIGAYGLAVLALYRRQILEA
Ga0364946_101241_451_636	3300033815	Sediment	VFGILMARKEVLGMGLIASLGYVAAGIWQLGPHWPLGALLLAIGAYGLATLALYRRQILE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F042842

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences