Metagenome / Metatranscriptome Family F042765

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F042765
Family Type	Metagenome / Metatranscriptome
Number of Sequences	157
Average Sequence Length	64 residues
Representative Sequence	MTALPAPGDAARLAGFLREHPRWSVFWDKCHGVWRAAEDDPDSALYAESRDLDTVLSYITAHS
Number of Associated Samples	96
Number of Associated Scaffolds	157

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	68.15 %
% of genes near scaffold ends (potentially truncated)	19.75 %
% of genes from short scaffolds (< 2000 bps)	80.89 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.76

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (58.599 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil (22.293 % of family members)
Environment Ontology (ENVO)	Unclassified (26.752 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.866 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 26.37% β-sheet: 17.58% Coil/Unstructured: 56.04%
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Predicted 3D Structure

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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.76
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.76
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
d.82.2.1: Frataxin-like	d3t3la_	3t3l	0.6287
d.82.2.1: Frataxin-like	d1ew4a_	1ew4	0.6285
c.67.1.8: SelA-like	d2aeua1	2aeu	0.61416
c.74.1.1: AraD-like aldolase/epimerase	d2v2ba_	2v2b	0.60973
d.204.1.0: automated matches	d4fyla1	4fyl	0.60866

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 157 Family Scaffolds
PF13560	HTH_31	16.56
PF04149	DUF397	2.55
PF00106	adh_short	1.27
PF01642	MM_CoA_mutase	1.27
PF00535	Glycos_transf_2	1.27
PF04978	DUF664	0.64
PF03450	CO_deh_flav_C	0.64
PF13250	DUF4041	0.64
PF00248	Aldo_ket_red	0.64
PF03796	DnaB_C	0.64
PF01053	Cys_Met_Meta_PP	0.64
PF04326	AlbA_2	0.64
PF13676	TIR_2	0.64
PF12697	Abhydrolase_6	0.64
PF10042	DUF2278	0.64
PF00575	S1	0.64
PF00171	Aldedh	0.64
PF02668	TauD	0.64
PF13581	HATPase_c_2	0.64
PF00589	Phage_integrase	0.64
PF01936	NYN	0.64
PF02826	2-Hacid_dh_C	0.64
PF06912	DUF1275	0.64
PF01402	RHH_1	0.64
PF06527	TniQ	0.64
PF08379	Bact_transglu_N	0.64
PF01636	APH	0.64
PF12802	MarR_2	0.64
PF00196	GerE	0.64
PF01925	TauE	0.64

COG ID	Name	Functional Category	% Frequency in 157 Family Scaffolds
COG1884	Methylmalonyl-CoA mutase, N-terminal domain/subunit	Lipid transport and metabolism [I]	1.27
COG1305	Transglutaminase-like enzyme, putative cysteine protease	Posttranslational modification, protein turnover, chaperones [O]	0.64
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.64
COG4100	Cystathionine beta-lyase family protein involved in aluminum resistance	Inorganic ion transport and metabolism [P]	0.64
COG3619	Uncharacterized membrane protein YoaK, UPF0700 family	Function unknown [S]	0.64
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.64
COG2865	Predicted transcriptional regulator, contains HTH domain	Transcription [K]	0.64
COG2175	Taurine dioxygenase, alpha-ketoglutarate-dependent	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.64
COG2008	Threonine aldolase	Amino acid transport and metabolism [E]	0.64
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	0.64
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	0.64
COG1432	NYN domain, predicted PIN-related RNAse, tRNA/rRNA maturation	General function prediction only [R]	0.64
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.64
COG1066	DNA repair protein RadA/Sms, contains AAA+ ATPase domain	Replication, recombination and repair [L]	0.64
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.64
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	0.64
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.64
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.64
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.64
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.64
COG0305	Replicative DNA helicase	Replication, recombination and repair [L]	0.64
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	0.64
COG0075	Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG	Amino acid transport and metabolism [E]	0.64

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.60 %
All Organisms	root	All Organisms	41.40 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.60 %
cellular organisms	root	All Organisms → cellular organisms	41.40 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.60 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	41.40 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.60 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	35.03 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.60 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	34.39 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.60 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	28.66 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.60 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	3.18 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.27 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.91 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.64 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.64 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.64 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.64 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.60 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.18 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.27 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.91 %
unclassified Streptosporangiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales	0.64 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.64 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.64 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.64 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.60 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.18 %
Actinophytocola	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinophytocola	1.27 %
Streptosporangiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales → Streptosporangiales bacterium	0.64 %
Actinocatenispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinocatenispora	0.64 %
Actinacidiphila	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Actinacidiphila	0.64 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.64 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.64 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	0.64 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.64 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.60 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.18 %
Actinophytocola	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinophytocola	1.27 %
Actinacidiphila soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Actinacidiphila → Actinacidiphila soli	0.64 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.64 %
Amycolatopsis niigatensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis niigatensis	0.64 %
Streptosporangiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales → Streptosporangiales bacterium	0.64 %
Actinocatenispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinocatenispora	0.64 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.64 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.64 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.60 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.18 %
Actinophytocola	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinophytocola	1.27 %
Streptomyces sp. 846.5	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. 846.5	0.64 %
Actinacidiphila soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Actinacidiphila → Actinacidiphila soli	0.64 %
Amycolatopsis niigatensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis niigatensis	0.64 %
Streptosporangiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales → Streptosporangiales bacterium	0.64 %
Actinocatenispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinocatenispora	0.64 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.64 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.64 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.64 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10222853	Not Available	1230	Open in IMG/M
3300003505\|JGIcombinedJ51221_10110246	All Organisms → cellular organisms → Bacteria	1099	Open in IMG/M
3300004082\|Ga0062384_101045767	Not Available	586	Open in IMG/M
3300004092\|Ga0062389_102607806	Not Available	672	Open in IMG/M
3300005434\|Ga0070709_11560523	Not Available	537	Open in IMG/M
3300005435\|Ga0070714_100069960	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3032	Open in IMG/M
3300005435\|Ga0070714_101215511	Not Available	735	Open in IMG/M
3300005435\|Ga0070714_101627485	Not Available	631	Open in IMG/M
3300005436\|Ga0070713_101598003	Not Available	633	Open in IMG/M
3300005445\|Ga0070708_100017076	All Organisms → cellular organisms → Bacteria	6043	Open in IMG/M
3300005445\|Ga0070708_100555852	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1082	Open in IMG/M
3300005467\|Ga0070706_101701813	Not Available	574	Open in IMG/M
3300005467\|Ga0070706_102008955	Not Available	524	Open in IMG/M
3300005468\|Ga0070707_100023739	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5801	Open in IMG/M
3300005468\|Ga0070707_100576886	Not Available	1087	Open in IMG/M
3300005556\|Ga0066707_10341533	Not Available	979	Open in IMG/M
3300005598\|Ga0066706_10613136	Not Available	864	Open in IMG/M
3300005602\|Ga0070762_10146504	All Organisms → cellular organisms → Bacteria	1410	Open in IMG/M
3300005614\|Ga0068856_101050503	Not Available	832	Open in IMG/M
3300005712\|Ga0070764_10005718	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5914	Open in IMG/M
3300006028\|Ga0070717_10277779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1485	Open in IMG/M
3300006028\|Ga0070717_10742738	Not Available	892	Open in IMG/M
3300006028\|Ga0070717_11310523	Not Available	658	Open in IMG/M
3300006893\|Ga0073928_11127506	Not Available	530	Open in IMG/M
3300009029\|Ga0066793_10582491	Not Available	638	Open in IMG/M
3300009038\|Ga0099829_11551960	Not Available	546	Open in IMG/M
3300009520\|Ga0116214_1021616	All Organisms → cellular organisms → Bacteria	2298	Open in IMG/M
3300009521\|Ga0116222_1360196	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	631	Open in IMG/M
3300009522\|Ga0116218_1047115	Not Available	1950	Open in IMG/M
3300009522\|Ga0116218_1325355	Not Available	687	Open in IMG/M
3300009672\|Ga0116215_1066719	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinocatenispora	1624	Open in IMG/M
3300009672\|Ga0116215_1240871	Not Available	792	Open in IMG/M
3300009698\|Ga0116216_10928692	Not Available	520	Open in IMG/M
3300009700\|Ga0116217_10931731	Not Available	532	Open in IMG/M
3300009824\|Ga0116219_10237590	Not Available	1037	Open in IMG/M
3300010159\|Ga0099796_10508396	Not Available	540	Open in IMG/M
3300010343\|Ga0074044_10556486	Not Available	749	Open in IMG/M
3300010373\|Ga0134128_10819891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1031	Open in IMG/M
3300010373\|Ga0134128_11388713	Not Available	773	Open in IMG/M
3300010379\|Ga0136449_100225984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3514	Open in IMG/M
3300010379\|Ga0136449_100417893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2370	Open in IMG/M
3300010379\|Ga0136449_100573714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1932	Open in IMG/M
3300010379\|Ga0136449_100580149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1918	Open in IMG/M
3300010379\|Ga0136449_100712173	All Organisms → cellular organisms → Bacteria	1681	Open in IMG/M
3300010379\|Ga0136449_100746829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1630	Open in IMG/M
3300010379\|Ga0136449_100861491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. 846.5	1484	Open in IMG/M
3300010379\|Ga0136449_100951183	Not Available	1391	Open in IMG/M
3300010379\|Ga0136449_101254275	Not Available	1161	Open in IMG/M
3300010379\|Ga0136449_101985375	Not Available	860	Open in IMG/M
3300010379\|Ga0136449_102258840	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales → Streptosporangiales bacterium	791	Open in IMG/M
3300010379\|Ga0136449_103722335	Not Available	575	Open in IMG/M
3300010379\|Ga0136449_103880649	Not Available	561	Open in IMG/M
3300010379\|Ga0136449_104098747	Not Available	542	Open in IMG/M
3300010396\|Ga0134126_10675770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1175	Open in IMG/M
3300010396\|Ga0134126_12868642	Not Available	522	Open in IMG/M
3300010396\|Ga0134126_12992825	Not Available	510	Open in IMG/M
3300010401\|Ga0134121_12562431	Not Available	553	Open in IMG/M
3300010876\|Ga0126361_10052832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1233	Open in IMG/M
3300010876\|Ga0126361_10750371	Not Available	719	Open in IMG/M
3300010880\|Ga0126350_11505095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Actinacidiphila → Actinacidiphila soli	601	Open in IMG/M
3300010880\|Ga0126350_11664622	Not Available	560	Open in IMG/M
3300010880\|Ga0126350_11953482	Not Available	608	Open in IMG/M
3300010880\|Ga0126350_12404825	Not Available	808	Open in IMG/M
3300011270\|Ga0137391_10333630	Not Available	1304	Open in IMG/M
3300012189\|Ga0137388_11742922	Not Available	556	Open in IMG/M
3300012201\|Ga0137365_11281329	Not Available	521	Open in IMG/M
3300012207\|Ga0137381_10053684	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3334	Open in IMG/M
3300012209\|Ga0137379_10071110	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3345	Open in IMG/M
3300012362\|Ga0137361_10790698	Not Available	864	Open in IMG/M
3300012363\|Ga0137390_10083029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3151	Open in IMG/M
3300014201\|Ga0181537_10046490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2948	Open in IMG/M
3300017821\|Ga0187812_1302377	Not Available	509	Open in IMG/M
3300017926\|Ga0187807_1255340	Not Available	575	Open in IMG/M
3300017937\|Ga0187809_10326594	Not Available	570	Open in IMG/M
3300017942\|Ga0187808_10099356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1264	Open in IMG/M
3300017942\|Ga0187808_10537375	Not Available	544	Open in IMG/M
3300017946\|Ga0187879_10406965	Not Available	754	Open in IMG/M
3300017948\|Ga0187847_10303157	Not Available	873	Open in IMG/M
3300017975\|Ga0187782_10879218	Not Available	694	Open in IMG/M
3300018001\|Ga0187815_10137001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1035	Open in IMG/M
3300018007\|Ga0187805_10447864	Not Available	602	Open in IMG/M
3300018047\|Ga0187859_10160331	Not Available	1194	Open in IMG/M
3300018058\|Ga0187766_10274107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1086	Open in IMG/M
3300018058\|Ga0187766_10424483	Not Available	883	Open in IMG/M
3300020582\|Ga0210395_10052593	All Organisms → cellular organisms → Bacteria	2983	Open in IMG/M
3300021178\|Ga0210408_10515717	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	950	Open in IMG/M
3300021178\|Ga0210408_10533106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	932	Open in IMG/M
3300021178\|Ga0210408_10837444	Not Available	719	Open in IMG/M
3300021178\|Ga0210408_11215318	Not Available	575	Open in IMG/M
3300021181\|Ga0210388_10298331	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1416	Open in IMG/M
3300021374\|Ga0213881_10106510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1215	Open in IMG/M
3300021432\|Ga0210384_10072511	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3099	Open in IMG/M
3300021477\|Ga0210398_11458992	Not Available	533	Open in IMG/M
3300025634\|Ga0208589_1031507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1438	Open in IMG/M
3300025910\|Ga0207684_10994072	Not Available	702	Open in IMG/M
3300025910\|Ga0207684_11289992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	602	Open in IMG/M
3300025910\|Ga0207684_11462283	Not Available	557	Open in IMG/M
3300025922\|Ga0207646_10114219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2425	Open in IMG/M
3300025922\|Ga0207646_10486304	Not Available	1113	Open in IMG/M
3300025922\|Ga0207646_11282378	Not Available	640	Open in IMG/M
3300025929\|Ga0207664_10506397	Not Available	1081	Open in IMG/M
3300026551\|Ga0209648_10222771	Not Available	1420	Open in IMG/M
3300027158\|Ga0208725_1013320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1358	Open in IMG/M
3300027497\|Ga0208199_1001946	All Organisms → cellular organisms → Bacteria	6574	Open in IMG/M
3300027568\|Ga0208042_1175015	Not Available	534	Open in IMG/M
3300027604\|Ga0208324_1188087	Not Available	551	Open in IMG/M
3300027625\|Ga0208044_1127867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	719	Open in IMG/M
3300027692\|Ga0209530_1009041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3143	Open in IMG/M
3300027824\|Ga0209040_10042844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2779	Open in IMG/M
3300027905\|Ga0209415_10270699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1502	Open in IMG/M
3300028877\|Ga0302235_10141141	Not Available	1078	Open in IMG/M
3300028879\|Ga0302229_10354202	Not Available	656	Open in IMG/M
3300029943\|Ga0311340_10031080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	6553	Open in IMG/M
3300029943\|Ga0311340_10634266	Not Available	928	Open in IMG/M
3300029951\|Ga0311371_10855349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1109	Open in IMG/M
3300029999\|Ga0311339_10086490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3943	Open in IMG/M
3300029999\|Ga0311339_10391569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinophytocola	1453	Open in IMG/M
3300029999\|Ga0311339_11658228	Not Available	562	Open in IMG/M
3300030007\|Ga0311338_10022140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	9150	Open in IMG/M
3300030007\|Ga0311338_10738683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	990	Open in IMG/M
3300030013\|Ga0302178_10262306	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300030056\|Ga0302181_10049227	All Organisms → cellular organisms → Bacteria	2230	Open in IMG/M
3300030399\|Ga0311353_10421013	Not Available	1198	Open in IMG/M
3300030580\|Ga0311355_10728512	Not Available	919	Open in IMG/M
3300030580\|Ga0311355_10958717	Not Available	772	Open in IMG/M
3300030617\|Ga0311356_11208135	Not Available	696	Open in IMG/M
3300031234\|Ga0302325_10167991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3871	Open in IMG/M
3300031234\|Ga0302325_10616940	Not Available	1591	Open in IMG/M
3300031234\|Ga0302325_12567411	Not Available	605	Open in IMG/M
3300031234\|Ga0302325_13397343	Not Available	502	Open in IMG/M
3300031236\|Ga0302324_102377516	Not Available	651	Open in IMG/M
3300031236\|Ga0302324_103322873	Not Available	526	Open in IMG/M
3300031525\|Ga0302326_10875417	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1281	Open in IMG/M
3300031525\|Ga0302326_11432370	Not Available	931	Open in IMG/M
3300031708\|Ga0310686_101287859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinophytocola	1749	Open in IMG/M
3300031708\|Ga0310686_109470602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	2892	Open in IMG/M
3300031708\|Ga0310686_113685817	All Organisms → cellular organisms → Bacteria	6473	Open in IMG/M
3300031708\|Ga0310686_116883907	Not Available	1096	Open in IMG/M
3300031769\|Ga0318526_10122788	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1048	Open in IMG/M
3300032160\|Ga0311301_10065435	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7824	Open in IMG/M
3300032160\|Ga0311301_10214578	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3262	Open in IMG/M
3300032160\|Ga0311301_10274478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2739	Open in IMG/M
3300032160\|Ga0311301_10517313	Not Available	1761	Open in IMG/M
3300032160\|Ga0311301_10836653	Not Available	1255	Open in IMG/M
3300032160\|Ga0311301_11478893	Not Available	839	Open in IMG/M
3300032160\|Ga0311301_12479796	Not Available	581	Open in IMG/M
3300032783\|Ga0335079_10031673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6066	Open in IMG/M
3300032783\|Ga0335079_11073297	Not Available	817	Open in IMG/M
3300032783\|Ga0335079_11766645	Not Available	603	Open in IMG/M
3300032805\|Ga0335078_11439511	Not Available	775	Open in IMG/M
3300032892\|Ga0335081_12279980	Not Available	567	Open in IMG/M
3300032895\|Ga0335074_10000657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	48255	Open in IMG/M
3300032895\|Ga0335074_11618929	Not Available	505	Open in IMG/M
3300032896\|Ga0335075_11379312	Not Available	596	Open in IMG/M
3300033134\|Ga0335073_11186230	Not Available	768	Open in IMG/M
3300033134\|Ga0335073_11439109	Not Available	670	Open in IMG/M
3300034163\|Ga0370515_0027562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis niigatensis	2579	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.36%
Host-Associated	Host-Associated	0.64%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.81%
Aquatic	Environmental → Aquatic	9.55%
Plants	Host-Associated → Plants	0.64%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.89%
Peat	Environmental → Terrestrial → Peat	15.29%
Freshwater	Environmental → Aquatic → Freshwater	8.92%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.64%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.64%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.64%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.50%
Loam	Environmental → Terrestrial → Soil → Loam	17.20%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	15.29%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.19%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.92%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.64%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.64%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.64%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	38.22%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	15.29%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.38%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.55%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.73%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.46%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.46%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.82%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.91%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.64%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.64%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.64%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.64%

Habitat	Taxonomy	Distribution
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	22.29%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	15.29%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.83%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	6.37%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.73%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.46%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.82%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	3.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.55%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.55%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.91%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.91%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.27%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.27%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.64%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.64%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.64%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.64%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.64%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.64%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.64%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.64%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.64%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300025634	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027158	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF011 (SPAdes)	Environmental	Open in IMG/M
3300027497	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes)	Environmental	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027625	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)	Environmental	Open in IMG/M
3300027692	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300028877	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3	Environmental	Open in IMG/M
3300028879	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030013	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_3	Environmental	Open in IMG/M
3300030056	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_102228532	3300001593	Forest Soil	VTSLPEPADAARLTRVLRDHQRWSAFWDKRHGVWRVTEDDPDSSLYAESRDVDAVISYITAHA*
JGIcombinedJ51221_101102463	3300003505	Forest Soil	VTSLPSPDEAGRLIAFLQHHPRWSVFYDKRHRLWRAAEDDPDSDLYTEASDVDTVIGYITAHR*
Ga0062384_1010457671	3300004082	Bog Forest Soil	MTTAHPSRDMIRLPAPGEAARLAGFLPEHPCWSVFWDKRAGVWRAAEDDPDSVLYAESWDLDTVMGYIAARS*
Ga0062389_1026078061	3300004092	Bog Forest Soil	MIILAAPADAARLSSFLYHHPHWSAFWDKRYGVWRVAEDDPDSALYAESRDLDTVLSYITTHA*
Ga0070709_115605231	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VITLPAPGDAARLTRFLTDHPRWSVFWDKRYGVWRAAEDDPDSALYAESQDTDTVINYIIAHA*
Ga0070714_1000699605	3300005435	Agricultural Soil	VITLPAPGDAARLTRFLTDHPRWSVFWDKRYGVWRASEDDPDSALYAESHDTDTVINYIIAHA*
Ga0070714_1012155112	3300005435	Agricultural Soil	MTSPRLPAPGDAARLARFMAGRPRWSVFWDKAYGVWRAAEDDPDSVLYAESRDADTVIGYIAAHS*
Ga0070714_1016274852	3300005435	Agricultural Soil	VTRLPPPGDAARLTRVLAGQPRWSAFWDKRDGVWRVAEDDPDSDLYAASSDASAVIAYIQAHS*
Ga0070713_1015980031	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	GRPGPVITLPAPGDAARLTRFLTDHPRWSVFWDKRYGVWRAAEDDPDSALYAESQDADTVISYITAHA*
Ga0070708_1000170762	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VTRLPPPGDAARLTSVLAGQSRWSAFWDKRDGVWRVAEDDPDSDLYAASSDASTVIAYIQAHS*
Ga0070708_1005558523	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MTSPRLPAPGDAARLARFMAGRPRWSVFWEKAYGVWRAAEDDPDSALYAESRDADTVISYITAHA*
Ga0070706_1017018131	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MTSLPTPEDAARLSSVLREHQRWSAFWDKRHGVWRVAEDDPDSSLYAESRDVDTVIGYIAAHA*
Ga0070706_1020089552	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VTRLPPPGDAARLTSVLAGQSRWSAFWDKRDGVWRVAEDDPDSDLYAASSDAS
Ga0070707_1000237393	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MTGLPAPADAARLIGFLQDHPRWSVFWDKRHRLWRAAEDDPDSALYAESPDVDTVIGYITAHT*
Ga0070707_1005768862	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MTSLPAPEDAARLSRFLQDHQRWSAFWDKRHGVWRVAEDDPDSALYAESPDLDTVISYITSHS*
Ga0066707_103415332	3300005556	Soil	MTSPRLPAPGDAARLARFMAGRPRWSVFWDKAYGVWRASEDDPDSALYAESRDADTVISYITAHA*
Ga0066706_106131361	3300005598	Soil	LATPTARRGDLMTSPRLPAPGDAARLARFMAGRPRWSVFWDKAYGVWRASEDDPDSALYAESRDADTVISYITAHA*
Ga0070762_101465041	3300005602	Soil	PPDRHEHMISIPAPADAARLTSFLDCHPRWSAFWDKRYCVWRAAEDDPDSSLYIESPDLDAVVRYITTHA*
Ga0068856_1010505031	3300005614	Corn Rhizosphere	VITLPAPGDAARLTRFLTDHPRWSVFWDKRYGVWRAAEDDPDSALYAESHDTDTVISYITAHA*
Ga0070764_100057185	3300005712	Soil	MTSLPTPEDAWRIAIFLQRHQWWSVFWDKKHGVWRASEDDPDSDLYAESQDVDTVIGFITAHC*
Ga0070717_102777792	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VITLPAPGDAARLTRFLTDHPRWSVFWDKRYGVWRAAEDDPDSALYAESHDTDTVINYITAHA*
Ga0070717_107427382	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MTSPRLPVPGEAARLALFIAGHPRWSVFWDKAYGVWRAAEDDPDSVLYAESRDADTVIGYIAAHS*
Ga0070717_113105232	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MTIPALPEPGDAARLTRFLQDHQRWSVFWDKKHGLWRAAEDDPDSALYTESRDVDIVIGYITAHT*
Ga0073928_111275061	3300006893	Iron-Sulfur Acid Spring	MIRLPASGDAARLTHVLPEHPRWSIFWDKKHGVWRAAEDDPDSALYAESQDLDAVIAYITAHS*
Ga0066793_105824912	3300009029	Prmafrost Soil	MTSQPAPADAARLASFLRRHPCWSAFWDKRSGVWRVAEDDPGSVLYAESPDLDTVIRYITAHP*
Ga0099829_115519602	3300009038	Vadose Zone Soil	MTILPAPAEAARLTRFLHHHPRRSAFWDKRYGLWRVAEDDPDSSLYAESRDLDTVISYITTHA*
Ga0116214_10216163	3300009520	Peatlands Soil	VTSLPRPEEAARLTAVLQEHPRWSAFWDKRYRVWRVSEDDPDSDLYAESGDLDQVISYVMTHS*
Ga0116222_13601962	3300009521	Peatlands Soil	SPGEAARLASFLQEPLRWSAFWDKGHGVWRVAEDDPDSNLYAESRDVDTVIGYIAENS*
Ga0116218_10471154	3300009522	Peatlands Soil	MTILPAPEEAARLTRVLQDHPQWSAFWDKRHGVWRVSEDDPDSDLYIESRDADAVIGYITAHS*
Ga0116218_13253552	3300009522	Peatlands Soil	VTGLPRPEEAARLTAVLQEHPRWSAFWDKRYRVWRVSEDDPDSDLYVESGDVDQVISYVMTHS*
Ga0116215_10667192	3300009672	Peatlands Soil	MASLPSPGEAARLASFLQEHLRWSAFWDKGHGVWRVAEDDPDSNLYAESRDVDTVIGYIAENS*
Ga0116215_12408711	3300009672	Peatlands Soil	MTSLPAPADAARLTRFLRCHPRWSVFWDKKYGVWRVAEDDPDSSLYAENSDVDTVISYITAHS*
Ga0116216_109286921	3300009698	Peatlands Soil	PPGRHEQMTALPAPADVMRLASFLHRHPRWSAFWDKRYGVWRVAEDDPDSDLYAESADADADAVIVIGYITAHR*
Ga0116217_109317311	3300009700	Peatlands Soil	MRLTTVLQEHLRWSAFWDKRYRVWRVSEDAPDSDLYAESGDVDQVISYVMTHS*
Ga0116219_102375903	3300009824	Peatlands Soil	MASLPSPGEAARLTSFLREHLRWSVFWDKGHGVWRVAEDDPDSNLYAESRDVDTVIGYIAENS*
Ga0099796_105083962	3300010159	Vadose Zone Soil	VTRLPPPGDAARLTSVLAGQPRWSAFWDKRDGVWRVAEDDPDSDLYAASSDASTVIAYIQAHS*
Ga0074044_105564862	3300010343	Bog Forest Soil	VTSLPRPEEAVRLTTVLQEHPRWSAFWDKRYRVWRVSEDDPDSDLYAESGDVDQVISYVIAHS*
Ga0134128_108198912	3300010373	Terrestrial Soil	MITLPAPGDAARLARILHQHARWSIFWDKRYGVWRAAEDDPDSALYTEAPDLDTVLGYITTHS*
Ga0134128_113887131	3300010373	Terrestrial Soil	VITLPAPGDAARLTRFLTDHPRWSVFWDKRYGVWRAAEDDPDSALYAESHDMDTVISYITAHD*
Ga0136449_1002259843	3300010379	Peatlands Soil	MIILPTPADATRLTGFLHCHPRWSAFWDKRYGVWRVAEDDPDSCLYAESPDLDTVISYITGHA*
Ga0136449_1004178934	3300010379	Peatlands Soil	MTSLPAPADAARLTSFLHHHPRWSAFWDKRYGAWRVAEDDPDSCLYAESRDLDTVIGYITAHVRATSCPA*
Ga0136449_1005737143	3300010379	Peatlands Soil	MASLPSPGEAARLASFLQEHLRWSAFWDKGHGVWRVAEDDPDSNLYADSRDVDTVIGYIAENS*
Ga0136449_1005801491	3300010379	Peatlands Soil	MTILPTPAEAARLTGFLRHHPRWSAFWDKKYGLWRVAEDDPDSSLYAESRDLDTVISYITAHA*
Ga0136449_1007121733	3300010379	Peatlands Soil	LPRPEEAVLLSTVLQEHPRWSAFWDKRYRVWRVSEDDPDSDLYVESGDVDQVISYVMTHS
Ga0136449_1007468292	3300010379	Peatlands Soil	MTILPAPADVARLTGFLHHHLRWSAFWDKRYGVWRVAEDDPDSCLYAESRDLDTVMSYIAAHS*
Ga0136449_1008614912	3300010379	Peatlands Soil	MASLPTPEDAWRIASFLQQHHCWSVFWDKKYGIWRAADDDPDSDLYAEGKDVDTVIGYIAAHD*
Ga0136449_1009511832	3300010379	Peatlands Soil	MTALPAPGDAARLAGFLREHPRWSVFWDKCHGVWRAAEDDPDSALYAESRDLDTVLGYITAHS*
Ga0136449_1012542752	3300010379	Peatlands Soil	VTGLPRPEEAARLTAVLKEHPRWSAFWDKRYRVWRVSEDDPDSDLYAESRDVDLVICYVTTHS*
Ga0136449_1019853751	3300010379	Peatlands Soil	PQDGDPVTSLPRPEEAVRLSTVLQEHPRWSAFWDKRYRVWRVSEDDPDSDLYEESGDVDQVISYVVTHS*
Ga0136449_1022588402	3300010379	Peatlands Soil	PGPAEAARLTGFLHRHPRWSAFWDKRYGVWRVAEDDPDSALYAESPDLDTVISYITIHS*
Ga0136449_1037223351	3300010379	Peatlands Soil	MTLLPTAEAAARLIRVLQEHPCWSAFWDQRYGVWRVAEDDPDSGLYAESSDADAVISYIQAHT*
Ga0136449_1038806491	3300010379	Peatlands Soil	MTILPAPADAARLMSFLRHHPRWSAFWDKQYGVWRAAEDDPDSCLYAEDSDLDTVISYITAHA*
Ga0136449_1040987471	3300010379	Peatlands Soil	ARLTRVLAENPGWSVFWDKAYGVWRAAEDDPDSSLYAEGRDLDTVISFITARS*
Ga0134126_106757703	3300010396	Terrestrial Soil	VITLPAPGDAARLTRFLTGHPRWSVFWDKRYGVWRAAEDDPDSALYAESHDTDTVINYITAHA*
Ga0134126_128686422	3300010396	Terrestrial Soil	VTRLPRPGDAARLTSVLAGQPRWSAFWDKRDGVWRVAEDDPDSDLYAASSDASTVIAYIQAHS*
Ga0134126_129928251	3300010396	Terrestrial Soil	VITHPAPDDAARLTRFLTGHPRWSVFWDKRYGVWRAAEDDPDSALYAESQDTDTVISYITAHA*
Ga0134121_125624312	3300010401	Terrestrial Soil	MTSPCLPAPGDAARLTGFLRDRPRWSVFWDKRYGVWRAAEDDPDSALYAESPDAGTVISYITAHP*
Ga0126361_100528322	3300010876	Boreal Forest Soil	MAGPHMISLPAPGEAARLADFLREHPRWSLFWDKKHGLWRAAEDDPDSALYAENRDVDTIISYITAHS*
Ga0126361_107503712	3300010876	Boreal Forest Soil	VTGIPSPQDAARITDVLREHPRWSAFWDKKDAVWRVAEDDPDSDLYAASSDAGTVISYIQAHA*
Ga0126350_115050951	3300010880	Boreal Forest Soil	MTSLPAPADAARLSSFLRRHPRWSAFWDKKYGLWRVAEDDPDSALYAESPDLDTVITYITTRD*
Ga0126350_116646221	3300010880	Boreal Forest Soil	VISLPAPGDAARLTRFLRDRHRWSVFWDKKYGVWRAAEDDPGSVLYAESRDLDTVLGYITAHD*
Ga0126350_119534821	3300010880	Boreal Forest Soil	VTGIPSPQDAARITGVLREHPRWSAFWDKKDAVWRVAEDDPDSDLYAASSDAATVISYIQAHA*
Ga0126350_124048251	3300010880	Boreal Forest Soil	MISQPAPQDAARLASVLRRHPSWSAFWDKRTGVWRAAEDDPDSVLHAESPDLDTVLRYITAHP*
Ga0137391_103336302	3300011270	Vadose Zone Soil	MTILPAPAEAARLTRFLHHHPRWSAFWDKRYGLWRVAEDDPDSSLYAESRDLDTVISYITTHA*
Ga0137388_117429222	3300012189	Vadose Zone Soil	MARLPSPRDAARLASFLQEHLRWSAFWDKGHGVWRVAEDDPDSTLYAESRDVDTVIDYIAENS*
Ga0137365_112813291	3300012201	Vadose Zone Soil	VLGDAARLARILHQHTRWSIFWDKRYGVWRAAEDDPDSALYTEARDLDTVLGYITTHS*
Ga0137381_100536841	3300012207	Vadose Zone Soil	MTSLPAPADAARLTGFLHRHPRWSAFWDKKYGVWRVAEDDPDSSLYAESRDLDTVISYITAQS*
Ga0137379_100711103	3300012209	Vadose Zone Soil	MASLPSPGEAARLASFLQEHLRWSAFWDKGHGVWRVAEDDPDSNLYAESGDVDTVIGYIVENSW*
Ga0137361_107906981	3300012362	Vadose Zone Soil	MSAIDTELMTSLPRPRKPARITCALQYHQRWSVFRDKRHGVWRAAEDDPDSDLSAGSRDTDTVISYTTAHS*
Ga0137390_100830296	3300012363	Vadose Zone Soil	MTILPAPAEAARLTSFLHHHPRWSAFWDKRYGLWRVAEDDPDSSLYAESRDLDTVISYITTHA*
Ga0181537_100464903	3300014201	Bog	MIALPAPGDAARLARFLHEHPRWSVFWDKRDGVWRAAEDDADSALYTESSDAATVIGYITAHP*
Ga0187812_13023771	3300017821	Freshwater Sediment	MTALPAPGDAARLAGLLREYPRWSLFWDKRYGVWRVAEDDPDSALYAESPDIDTVLGYITAHS
Ga0187807_12553401	3300017926	Freshwater Sediment	PAPGDAARLAGFLREHPRWSVFRDKCHGVWRAAEDDPDSALYAESRDLDTVLGYITAHS
Ga0187809_103265942	3300017937	Freshwater Sediment	MTAPPAPGDAALLARVLRQHTSWSVFWDRRYGVWRAAEDDPDSALYTEDRDLVTVIGYITAHS
Ga0187808_100993563	3300017942	Freshwater Sediment	MTALPAPGDAARLAGFLREHPRWSVFWDKCHGVWRAAEDDPDSALYAESRDLDTVLGYITAHS
Ga0187808_105373752	3300017942	Freshwater Sediment	MDARREQMMRLPAPADAARLARVLHDYPRWSVFWDKRHGVWRAAEDDPDSALYAESRDLD
Ga0187879_104069651	3300017946	Peatland	VTSLPGSGEAARLICFLQGHPRWSAFWDKAYGVWRVAEDDPDSSLYAESQDLDTVISYITAHS
Ga0187847_103031572	3300017948	Peatland	VTSLPGSGEAARLVCFLQGHPRWSAFWDKAYGVWRVAEDDPDSSLYAESQDLDTVISYITAHS
Ga0187782_108792181	3300017975	Tropical Peatland	LIMAAASMITLPPPADAARLAGFLHGHPRWSVFWDKRYQVWRAAEDDPGSELYTESSDVQAIIGYITARS
Ga0187815_101370012	3300018001	Freshwater Sediment	DRAGMTALPAPGDAARLAGLLREYPRWSLFWDKRYGVWRVAEDDPDSALYAESPNIDTVLGYITAHS
Ga0187805_104478642	3300018007	Freshwater Sediment	MTALPAPGDAARLAGFLREHPRWSVFWDKCHGVWRAAEDDPDSALYAESRDLDTVLSYITAHS
Ga0187859_101603311	3300018047	Peatland	VTSLPGSGEAARLICFLQGHPRWSAFWDKAYGVWRVAEDDPDSSLYAESRDLDTVISYITAHS
Ga0187766_102741072	3300018058	Tropical Peatland	VTSLPSPAEAARLASFLHEHPRWSAYWDKRYRVWRVSEDDPDSDLYAESADVDQVISYVMMHS
Ga0187766_104244831	3300018058	Tropical Peatland	MPSPEDAARLTAVLHEHPRWSAFWDKRYRLWRVSEDDPDSDLYAESADVDQVISYVMMHS
Ga0210395_100525933	3300020582	Soil	MTGAPMISLLAPGDAARLAGFLHEYPSWSVFWDKRQCVWRAAEDDPDSDLYAQSPDLDTVISYITSHS
Ga0210408_105157172	3300021178	Soil	MTRLPASADAARLTSFLHHHPRWSAFWDKQYGVWRVAEDDPDSALYAESPDVDAVIGYITDHS
Ga0210408_105331062	3300021178	Soil	MTSPRLPAPGDAARLTGSLQDRPHWSVFWDKRYGVWRAAEDDPDSALYAESRDLDAVIGYIIAHS
Ga0210408_108374442	3300021178	Soil	EPMTGVPAPADAERLTGFLREHPRWSVFWDKRHGVWRVAEDDPDSTLYAESQDVDVVIGYITAHS
Ga0210408_112153182	3300021178	Soil	MITLPAPGDAERLVRILHQHPRWAIFWDKRYGVWRAAEDDPDSALYTEDRDLDTVLGYITAHA
Ga0210388_102983312	3300021181	Soil	VTSLPSPDEAGRLIAFLQHHPRWSVFYDKRHRLWRAAEDDPDSDLYTEASDVDTVIGYITAHR
Ga0213881_101065102	3300021374	Exposed Rock	MTGMPPPWEAARIAGVLQDHQRWSVFWDKRHRVWRAAEDDPDSDLYAESRDANAVIGYIVAHS
Ga0210384_100725115	3300021432	Soil	MTSPRLPAPGDAARLTGFLQDRPHWSVFWDKRYGVWRAAEDDPDSALYAESRDLDAVIGYIIAHT
Ga0210398_114589922	3300021477	Soil	TSLPSPEEAWRLIAFLQHHPRWSVFYDKRYRLWRAAEDDPDSDLYTEASDVDTVIGYITTHR
Ga0208589_10315071	3300025634	Arctic Peat Soil	MTLPAPGDAARLTGVLRQHPRWSFFWDKRHAVWRAAEDDPDSALYAESGDLDTVISYVTAHS
Ga0207684_109940722	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VTRLPPPGDAARLTSVLAGQSRWSAFWDKRDGVWRVAEDDPDSDLYAASSDASTVIAYIQAHS
Ga0207684_112899921	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MTSPRLPAHGDAARLTRFLADRPRWSVFWDKKYGVWRAAEDDPDSALYAESRDADTVIRYIAACT
Ga0207684_114622832	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MTSLPTPEDAARLSSVLREHQRWSAFWDKRHGVWRVAEDDPDSSLYAESRDVDTVIGYIAAHA
Ga0207646_101142192	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MTGLPAPADAARLIGFLQDHPRWSVFWDKRHRLWRAAEDDPDSALYAESPDVDTVIGYITAHT
Ga0207646_104863042	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MTSLPAPEDAARLSRFLQDHQRWSAFWDKRHGVWRVAEDDPDSALYAESPDLDTVISYITSHS
Ga0207646_112823782	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MTSPRLPAPGDAARLARFMAGRPRWSVFWEKAYGVWRAAEDDPDSALYAESRDADTVISYITAHA
Ga0207664_105063973	3300025929	Agricultural Soil	VITLPAPGDAARLTRFLTDHPRWSVFWDKRYGVWRASEDDPDSALYAESHDTDTVINYIIAHA
Ga0209648_102227713	3300026551	Grasslands Soil	MTRLPASADAARLTSFLHHHPRWSAFWDKQYGVWRVAEDDPDSALYAESPDVDAVIGYITAYS
Ga0208725_10133202	3300027158	Forest Soil	VTSLPSPDEAGRLIAFLQHHPRWSVFYDKRHRLWRAAEDDPDSDLYTEASDVDTVIGYITTHR
Ga0208199_10019466	3300027497	Peatlands Soil	VTSLPRPEEAARLTAVLQEHPRWSAFWDKRYRVWRVSEDDPDSDLYAESGDLDQVISYVMTHS
Ga0208042_11750151	3300027568	Peatlands Soil	VTSLPRPEEAARLTAVLQEHPRWSAFWDKRYRVWRVSEDDPDSDLYAESGDLDQVISYVM
Ga0208324_11880871	3300027604	Peatlands Soil	MTILPAPEEAARLTRVLQDHPQWSAFWDKRHGVWRVSEDDPDSDLYIESRDADAVIGYITAHS
Ga0208044_11278672	3300027625	Peatlands Soil	GNRPEAGDPVTSLPRPEEAARLTAVLQEHPRWSAFWDKRYRVWRVSEDDPDSDLYAESGDLDQVISYVMTHS
Ga0209530_10090413	3300027692	Forest Soil	VTSLPEPADAARLTRVLRDHQRWSAFWDKRHGVWRVTEDDPDSSLYAESRDVDAVISYITAHA
Ga0209040_100428441	3300027824	Bog Forest Soil	AARIVSVLRDHLRWSAFWDKRYGMWRVAEDDPDSDLYAESSDVGAVIGYIKAHS
Ga0209415_102706994	3300027905	Peatlands Soil	MTALPAPGDAARLAGFLREHPRWSVFWDKCHGVWRAAEDDPDSALYAESRDLDT
Ga0302235_101411413	3300028877	Palsa	VTSLPRRGEAARLIRFLQGHPRWSAFWDKRHGVWRVAEDDPDSSLYAESSDLDTVISYITSHS
Ga0302229_103542021	3300028879	Palsa	RSVPRPSERPGPVTSLPGSGEAARLICFLQGHSRWSAFWDKAYGVWRVAEDDPDSSLYAESRDLDTVISYITAHS
Ga0311340_100310806	3300029943	Palsa	MMVLPAPGDAARLASVLCQYPRWSFFWDKRTGVWRAAEDDPDSALYTESGDLDAVIGYIRTHS
Ga0311340_106342662	3300029943	Palsa	MTTPQWRSHNPPVREQMMTLPAPGDAARLSSVLCEHPRWSFFWDKKHGVWRAAEDDPESVLYAESRDLDTVIGYVAAHS
Ga0311371_108553493	3300029951	Palsa	MISLPAPGDAARLTGVLREHPRWSFFWDKRHAVWRAAEDDPDSALYAGSRDLDTVLSYVTAHS
Ga0311339_100864906	3300029999	Palsa	VTSLPGGGEAARLIRFLQGHPRWSAFWDKAYGVWRVAEDDPDSSLYAESRDVDTVISYITSHS
Ga0311339_103915693	3300029999	Palsa	MMTLPAPGDAARLSSVLCEHPRWSFFWDKKHGVWRAAEDDPESVLYAESRDLDTVIGYVAAHS
Ga0311339_116582281	3300029999	Palsa	MILPAVGEAARLASVLPQFPRWSFFWDKKSGVWRAAEDDPDSALYTASQDLDTVI
Ga0311338_100221405	3300030007	Palsa	VTSLPGSGEAARLICFLQGHSRWSAFWDKAYGVWRVAEDDPDSSLYAESRDLDTVISYITAHS
Ga0311338_107386831	3300030007	Palsa	HLVFFAGRREQMISLPAPGDAARLTGVLREHPRWSFFWDKRHAVWRAAEDDPDSALYAGSRDLDTVLSYVTAHS
Ga0302178_102623062	3300030013	Palsa	SGRDTMISLPTPGDAARLARVLQQQPRWTVFWDKRHAVWRAAEDDPDSALYTESGDLDTVIGYILAHA
Ga0302181_100492274	3300030056	Palsa	GGNQMISLPAPGDAARLARVLQQQPRWTVFWDKRHAVWRAAEDDPDSALYTESGDLDTVIGYILAHA
Ga0311353_104210131	3300030399	Palsa	MISLPAPGDAARLARVLQQQPRWTVFWDKRHAVWRAAEDDPDSALYTESGDLDTVIGYILAHA
Ga0311355_107285121	3300030580	Palsa	VTSPPGSGEAARLICFLQGHPRWSAFWDKAYGVWRVAEDDPDSSLYAESRDLDTVISYITAH
Ga0311355_109587173	3300030580	Palsa	MISLPAPGDAARLARVLQQQPRWTVFWDKRHAVWRAAEDDPDSALYTESGDLDTVIGYILAH
Ga0311356_112081351	3300030617	Palsa	VTSLPGSGEAARLICLLQGHSRWSAFWDKAYGVWRVAEDDPDSSLYAESRDLDTVISYITAHS
Ga0302325_101679915	3300031234	Palsa	MTALPAPGDAARLARFLHEHPRWSVFWDKRDGVWRAAEDDPDSALYAESSDAATVIGYITAHP
Ga0302325_106169404	3300031234	Palsa	MILPAVGEAARLASVLPQFPRWSFFWDKKSGVWRAAEDDPDSVLYTESRDLDTVIGYVTAHS
Ga0302325_125674111	3300031234	Palsa	MTILPAPADAARLTSFLRHHLRWSAFWDKKYGVWRVAEDDPDSALYAESRDLDTVLRYIAAHA
Ga0302325_133973432	3300031234	Palsa	MILPAVGEAARLAGVLPQFPRWSFFWDKKSGVWRAAEDDPDSALYTASQDLDTVISYVTSHS
Ga0302324_1023775161	3300031236	Palsa	MISLPAPGDAARLTRVLREHPRWSFFWDKAHGVWRAAEDDPDSALYTESQDLDTVIGYVTSHS
Ga0302324_1033228732	3300031236	Palsa	MALPVPGDAARLTGVMRLHPRWSFFWDKRHAVWRAAEDDPDSALYTESGDLDTVICYISAHS
Ga0302326_108754172	3300031525	Palsa	APGDAMRLSRFLQDHQGWSAFWDKAYGVWRVAEDDPDSSLHAESPDLDTVIRYITAHD
Ga0302326_114323702	3300031525	Palsa	RPKRPGPVTSLPGGGEAARLICFLQGHPRWSAFWDKAYGVWRVAEDDPDSSLYAESRDVDTVISYITSHS
Ga0310686_1012878593	3300031708	Soil	MTALGAGRAQADGPGSVTSLPTTAAAARVSSVLEGHPRWSAFWDKRHGVWRVAEDDPDSDLYAESSDAGTVIDYIQAHS
Ga0310686_1094706023	3300031708	Soil	MTILPAPADAARLTSFLRHHLRWSAFWDKKYGVWRVAEDDPDSCLYAESRDLDTVLSYIAAHS
Ga0310686_1136858174	3300031708	Soil	VTSLPRPEEAVRLTAVLQAHPRWSAFWDKRYRVWRVSEDDPDSDLYVESGDVDQVISYVMTHS
Ga0310686_1168839072	3300031708	Soil	MTALPASGDAARLAGFLREHPRWSVFWDKCHGVWRAAEDDPDSALYAESRDLDTVLGYITAHS
Ga0318526_101227882	3300031769	Soil	VTSLPSPAEAAQLASFLHEHPRWSAYWDKRYRVWRVSEDDPDSDLYAESADVDQVIRYVMTHS
Ga0311301_100654352	3300032160	Peatlands Soil	MTSLPAPADAARLTSFLHHHPRWSAFWDKRYGAWRVAEDDPDSCLYAESRDLDTVIGYITAHVRATSCPA
Ga0311301_102145784	3300032160	Peatlands Soil	MIILPTPADATRLTGFLHCHPRWSAFWDKRYGVWRVAEDDPDSCLYAESPDLDTVISYITGHA
Ga0311301_102744786	3300032160	Peatlands Soil	VTCLPRPGEVMRLTTVLQEHLRWSAFWDKRYRVWRVSEDAPDSDLYAESGDVDQVISYVMTHS
Ga0311301_105173131	3300032160	Peatlands Soil	MTILPTPAEAARLTGFLRHHPRWSAFWDKKYGLWRVAEDDPDSSLYAESRDLDTVISYITAHA
Ga0311301_108366532	3300032160	Peatlands Soil	VTGLPRPEEAARLTAVLKEHPRWSAFWDKRYRVWRVSEDDPDSDLYAESRDVDLVICYVTTHS
Ga0311301_114788932	3300032160	Peatlands Soil	VTSLPRPEDAARLTAVLQEHPRWSAFWDKRYRVWRVSEDDPDSDLYVESGDVDQVISYVMTHS
Ga0311301_124797961	3300032160	Peatlands Soil	APADVARLTRVLAENPGWSVFWDKAYGVWRAAEDDPDSSLYAEGRDLDTVISFITARS
Ga0335079_100316734	3300032783	Soil	VTRLPRPGDAARLTSVLAGQPRWSAFWDKRDGVWRVAEDDPDSDLYAASSDASTVIAYIQAHS
Ga0335079_110732971	3300032783	Soil	MTCLPAPADAARLTRVLAENPRWSVFWDKAYGVWRAAEDDPDSSLYIEGRDLDTVISYITTHS
Ga0335079_117666451	3300032783	Soil	MVGSSLAAGQAKRLARILHEHPSWSVFWDKRQCVWRAAEDDPDSDLHAESPALDTVISYITRHP
Ga0335078_114395111	3300032805	Soil	MTSSCLPAPGDVARLTRFLQDHQRWSVFWDKRHGLWRAAEDDPDSALYTASRDVDTVIGYII
Ga0335081_122799802	3300032892	Soil	MTSSCLPAPGDVARLTRFLQDHQRWSVFWDKQHGLWRAAEDDPDSALYTASRDVDTVIGYIISHP
Ga0335074_100006575	3300032895	Soil	MIRPPEPGGAAALAGFMAEYPCWSVFWDKAYGVWRAAEDDPDSALYIESRDLDTVLGYITAQA
Ga0335074_116189291	3300032895	Soil	MVTTRGAAEMIRLPAAGDAARLAGFLAGHRCWSVFWDKRFGVWRAAEDDPDSFLYAQSADLDTVISYITAHT
Ga0335075_113793121	3300032896	Soil	MTSLPSAADAAQLASFLREHPWWSVFWDKKYQVWRVAEDDPDSSLYAEHPRAGEVIHYMAEHS
Ga0335073_111862301	3300033134	Soil	MTSLPAPGDAARLARFLQDHPRWSVFWDKRDGVWRAAEDDPDSSLYAESRDVDAVIGYITDRT
Ga0335073_114391093	3300033134	Soil	MITLPAPGDAFRLACVLRQHTRWSIFWDKRYGVWRAAEDDPDSALYAEARDLDAVLGYITTHS
Ga0370515_0027562_113_304	3300034163	Untreated Peat Soil	MMILPAPADAARLAGVLRQYPRWSFFWDKRNGVWRAAEDDPDSALCAESQDLDTVIGYISTHS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F042765

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences