NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F042633

Metagenome / Metatranscriptome Family F042633

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F042633
Family Type Metagenome / Metatranscriptome
Number of Sequences 158
Average Sequence Length 66 residues
Representative Sequence MTTRKILLGVLLAAGAAGLFSACSTMPQGPTYTDAELRAICERRGGWWRGELIAGYCEFQSASLAP
Number of Associated Samples 139
Number of Associated Scaffolds 158

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 82.28 %
% of genes near scaffold ends (potentially truncated) 29.11 %
% of genes from short scaffolds (< 2000 bps) 76.58 %
Associated GOLD sequencing projects 134
AlphaFold2 3D model prediction Yes
3D model pTM-score0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (92.405 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(12.658 % of family members)
Environment Ontology (ENVO) Unclassified
(30.380 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(27.215 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: Yes Secondary Structure distribution: α-helix: 39.36%    β-sheet: 4.26%    Coil/Unstructured: 56.38%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.46
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 158 Family Scaffolds
PF02894GFO_IDH_MocA_C 27.22
PF02633Creatininase 13.29
PF00202Aminotran_3 7.59
PF01027Bax1-I 5.70
PF08281Sigma70_r4_2 2.53
PF00296Bac_luciferase 2.53
PF12680SnoaL_2 1.90
PF00180Iso_dh 1.90
PF01979Amidohydro_1 1.27
PF12867DinB_2 0.63
PF12697Abhydrolase_6 0.63
PF044632-thiour_desulf 0.63
PF03740PdxJ 0.63
PF06271RDD 0.63
PF01717Meth_synt_2 0.63
PF07978NIPSNAP 0.63
PF00027cNMP_binding 0.63
PF02615Ldh_2 0.63
PF12796Ank_2 0.63
PF01636APH 0.63
PF00578AhpC-TSA 0.63
PF04392ABC_sub_bind 0.63
PF00072Response_reg 0.63

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 158 Family Scaffolds
COG0673Predicted dehydrogenaseGeneral function prediction only [R] 27.22
COG1402Creatinine amidohydrolase/Fe(II)-dependent FAPy formamide hydrolase (riboflavin and F420 biosynthesis)Coenzyme transport and metabolism [H] 13.29
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 2.53
COG0620Methionine synthase II (cobalamin-independent)Amino acid transport and metabolism [E] 0.63
COG0854Pyridoxine 5'-phosphate synthase PdxJCoenzyme transport and metabolism [H] 0.63
COG1683Uncharacterized conserved protein YbbK, DUF523 familyFunction unknown [S] 0.63
COG1714Uncharacterized membrane protein YckC, RDD familyFunction unknown [S] 0.63
COG2055Malate/lactate/ureidoglycolate dehydrogenase, LDH2 familyEnergy production and conversion [C] 0.63
COG2984ABC-type uncharacterized transport system, periplasmic componentGeneral function prediction only [R] 0.63


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms93.04 %
UnclassifiedrootN/A6.96 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000596|KanNP_Total_noBrdU_T14TCDRAFT_1011863All Organisms → cellular organisms → Bacteria952Open in IMG/M
3300000709|KanNP_Total_F14TBDRAFT_1013493All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria626Open in IMG/M
3300000956|JGI10216J12902_109754175All Organisms → cellular organisms → Bacteria → Proteobacteria2973Open in IMG/M
3300001431|F14TB_100961913All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1813Open in IMG/M
3300001661|JGI12053J15887_10308109All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales773Open in IMG/M
3300003347|JGI26128J50194_1004103All Organisms → cellular organisms → Bacteria964Open in IMG/M
3300003349|JGI26129J50193_1000462All Organisms → cellular organisms → Bacteria → Proteobacteria2533Open in IMG/M
3300003911|JGI25405J52794_10152542Not Available527Open in IMG/M
3300003994|Ga0055435_10001246All Organisms → cellular organisms → Bacteria → Proteobacteria3381Open in IMG/M
3300004025|Ga0055433_10092124All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium678Open in IMG/M
3300004058|Ga0055498_10025789All Organisms → cellular organisms → Bacteria → Proteobacteria908Open in IMG/M
3300004145|Ga0055489_10041909All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1198Open in IMG/M
3300004156|Ga0062589_100205401All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1427Open in IMG/M
3300004156|Ga0062589_100611309All Organisms → cellular organisms → Bacteria948Open in IMG/M
3300004463|Ga0063356_100078796All Organisms → cellular organisms → Bacteria → Proteobacteria3468Open in IMG/M
3300005213|Ga0068998_10076697All Organisms → cellular organisms → Bacteria → Proteobacteria709Open in IMG/M
3300005294|Ga0065705_10655381All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium675Open in IMG/M
3300005295|Ga0065707_10213812All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1248Open in IMG/M
3300005295|Ga0065707_10521598All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium741Open in IMG/M
3300005332|Ga0066388_100135558All Organisms → cellular organisms → Bacteria3016Open in IMG/M
3300005332|Ga0066388_102979851All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes → Pleosporomycetidae → Pleosporales → Pleosporineae → Phaeosphaeriaceae → Paraphoma → Paraphoma chrysanthemicola865Open in IMG/M
3300005353|Ga0070669_100098799All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2199Open in IMG/M
3300005458|Ga0070681_11124469All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium707Open in IMG/M
3300005459|Ga0068867_100413584All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1141Open in IMG/M
3300005713|Ga0066905_100003195All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria6383Open in IMG/M
3300005764|Ga0066903_100027945All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia6278Open in IMG/M
3300005764|Ga0066903_105262617All Organisms → cellular organisms → Bacteria684Open in IMG/M
3300005937|Ga0081455_10088969All Organisms → cellular organisms → Bacteria → Proteobacteria2507Open in IMG/M
3300006847|Ga0075431_100624287All Organisms → cellular organisms → Bacteria → Proteobacteria1060Open in IMG/M
3300009038|Ga0099829_10003344All Organisms → cellular organisms → Bacteria → Proteobacteria9397Open in IMG/M
3300009053|Ga0105095_10069048All Organisms → cellular organisms → Bacteria → Proteobacteria1904Open in IMG/M
3300009088|Ga0099830_10024226All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria4006Open in IMG/M
3300009090|Ga0099827_10619832All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium933Open in IMG/M
3300009098|Ga0105245_10638689All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1094Open in IMG/M
3300009147|Ga0114129_10042015All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria6437Open in IMG/M
3300009166|Ga0105100_10750537All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium603Open in IMG/M
3300009553|Ga0105249_10751946All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1037Open in IMG/M
3300009792|Ga0126374_10780366Not Available728Open in IMG/M
3300009814|Ga0105082_1037515All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium789Open in IMG/M
3300009819|Ga0105087_1065642All Organisms → cellular organisms → Bacteria621Open in IMG/M
3300010047|Ga0126382_10264711All Organisms → cellular organisms → Bacteria1269Open in IMG/M
3300010047|Ga0126382_10297040All Organisms → cellular organisms → Bacteria → Proteobacteria1211Open in IMG/M
3300010048|Ga0126373_11185037All Organisms → cellular organisms → Bacteria → Proteobacteria830Open in IMG/M
3300010359|Ga0126376_10105129All Organisms → cellular organisms → Bacteria2163Open in IMG/M
3300010360|Ga0126372_10016719All Organisms → cellular organisms → Bacteria4177Open in IMG/M
3300010360|Ga0126372_11919209All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium637Open in IMG/M
3300010361|Ga0126378_11003149All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium939Open in IMG/M
3300010362|Ga0126377_10418838All Organisms → cellular organisms → Bacteria → Proteobacteria1355Open in IMG/M
3300010366|Ga0126379_12774496Not Available586Open in IMG/M
3300010391|Ga0136847_12746540All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium501Open in IMG/M
3300010398|Ga0126383_12352834Not Available618Open in IMG/M
3300010400|Ga0134122_10383017All Organisms → cellular organisms → Bacteria → Proteobacteria1236Open in IMG/M
3300010862|Ga0126348_1301988All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium525Open in IMG/M
3300011419|Ga0137446_1034098All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1093Open in IMG/M
3300011428|Ga0137456_1152309All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium621Open in IMG/M
3300011428|Ga0137456_1193243All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium550Open in IMG/M
3300011429|Ga0137455_1169753All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium653Open in IMG/M
3300011438|Ga0137451_1018165All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2028Open in IMG/M
3300011443|Ga0137457_1118885All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium856Open in IMG/M
3300012034|Ga0137453_1098037All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium576Open in IMG/M
3300012203|Ga0137399_10099805All Organisms → cellular organisms → Bacteria → Proteobacteria2243Open in IMG/M
3300012225|Ga0137434_1002147All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1689Open in IMG/M
3300012360|Ga0137375_10695809All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium831Open in IMG/M
3300012685|Ga0137397_10029252All Organisms → cellular organisms → Bacteria → Proteobacteria3915Open in IMG/M
3300012929|Ga0137404_10068302All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales2780Open in IMG/M
3300012929|Ga0137404_10274156All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1455Open in IMG/M
3300012944|Ga0137410_10852191All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium768Open in IMG/M
3300012971|Ga0126369_10141440All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2249Open in IMG/M
3300014870|Ga0180080_1016279All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1021Open in IMG/M
3300014873|Ga0180066_1009531All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1639Open in IMG/M
3300014882|Ga0180069_1182381All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium511Open in IMG/M
3300015170|Ga0120098_1032432All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium691Open in IMG/M
3300015252|Ga0180075_1091693All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium538Open in IMG/M
3300015254|Ga0180089_1019411All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1236Open in IMG/M
3300017974|Ga0187777_10165911All Organisms → cellular organisms → Bacteria1479Open in IMG/M
3300017997|Ga0184610_1142286All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium784Open in IMG/M
3300018000|Ga0184604_10016717All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1669Open in IMG/M
3300018028|Ga0184608_10412024Not Available586Open in IMG/M
3300018052|Ga0184638_1080069All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1197Open in IMG/M
3300018054|Ga0184621_10309313All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium557Open in IMG/M
3300018056|Ga0184623_10331322All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium684Open in IMG/M
3300018061|Ga0184619_10149613All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1065Open in IMG/M
3300018063|Ga0184637_10129762All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1555Open in IMG/M
3300018074|Ga0184640_10079339All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1402Open in IMG/M
3300018074|Ga0184640_10194034All Organisms → cellular organisms → Bacteria916Open in IMG/M
3300018075|Ga0184632_10358621All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium622Open in IMG/M
3300018084|Ga0184629_10243762All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium938Open in IMG/M
3300018422|Ga0190265_10089961All Organisms → cellular organisms → Bacteria2842Open in IMG/M
3300018422|Ga0190265_10300282All Organisms → cellular organisms → Bacteria1676Open in IMG/M
3300018422|Ga0190265_10637538All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1186Open in IMG/M
3300018422|Ga0190265_10688310All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1144Open in IMG/M
3300018422|Ga0190265_11227465All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium868Open in IMG/M
3300018429|Ga0190272_10285612All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1267Open in IMG/M
3300018429|Ga0190272_12536707All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium559Open in IMG/M
3300019254|Ga0184641_1047632All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium518Open in IMG/M
3300019265|Ga0187792_1188322All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium733Open in IMG/M
3300019265|Ga0187792_1267438All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium699Open in IMG/M
3300019458|Ga0187892_10031317All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria4319Open in IMG/M
3300019487|Ga0187893_10048414All Organisms → cellular organisms → Bacteria → Proteobacteria4359Open in IMG/M
3300019487|Ga0187893_10770951All Organisms → cellular organisms → Bacteria587Open in IMG/M
3300019879|Ga0193723_1005786All Organisms → cellular organisms → Bacteria → Proteobacteria4168Open in IMG/M
3300019889|Ga0193743_1061366All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1567Open in IMG/M
3300019997|Ga0193711_1009398All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1233Open in IMG/M
3300020061|Ga0193716_1247914All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium642Open in IMG/M
3300021073|Ga0210378_10072757All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1347Open in IMG/M
3300021081|Ga0210379_10211268All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium838Open in IMG/M
3300021081|Ga0210379_10256873All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium759Open in IMG/M
3300021090|Ga0210377_10007432All Organisms → cellular organisms → Bacteria8748Open in IMG/M
3300024330|Ga0137417_1049423All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium597Open in IMG/M
3300025324|Ga0209640_10012293All Organisms → cellular organisms → Bacteria → Proteobacteria7451Open in IMG/M
3300025535|Ga0207423_1001427All Organisms → cellular organisms → Bacteria → Proteobacteria3409Open in IMG/M
3300025549|Ga0210094_1038618All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium819Open in IMG/M
3300025885|Ga0207653_10321795All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05601Open in IMG/M
3300025917|Ga0207660_10828576All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium755Open in IMG/M
3300025922|Ga0207646_11926992All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium503Open in IMG/M
3300025933|Ga0207706_10023058All Organisms → cellular organisms → Bacteria → Proteobacteria5590Open in IMG/M
3300025957|Ga0210089_1015333Not Available861Open in IMG/M
3300025965|Ga0210090_1019399All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium930Open in IMG/M
3300025971|Ga0210102_1054529Not Available863Open in IMG/M
3300025973|Ga0210145_1016798All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium808Open in IMG/M
3300026002|Ga0208907_104952All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium613Open in IMG/M
3300026015|Ga0208286_1001087All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1407Open in IMG/M
3300026285|Ga0209438_1000025All Organisms → cellular organisms → Bacteria → Proteobacteria44999Open in IMG/M
3300026469|Ga0257169_1003549All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1618Open in IMG/M
3300026499|Ga0257181_1013681All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1129Open in IMG/M
3300027381|Ga0208983_1029562All Organisms → cellular organisms → Bacteria → Proteobacteria1071Open in IMG/M
3300027462|Ga0210000_1022299All Organisms → cellular organisms → Bacteria971Open in IMG/M
3300027647|Ga0214468_1057947Not Available1002Open in IMG/M
(restricted) 3300027799|Ga0233416_10206074All Organisms → cellular organisms → Bacteria675Open in IMG/M
3300027815|Ga0209726_10096588All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1802Open in IMG/M
3300027846|Ga0209180_10016418All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria3881Open in IMG/M
3300027882|Ga0209590_10947868All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium539Open in IMG/M
3300028784|Ga0307282_10102724Not Available1328Open in IMG/M
3300028787|Ga0307323_10091791All Organisms → cellular organisms → Bacteria → Proteobacteria1087Open in IMG/M
3300028803|Ga0307281_10001539All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales6347Open in IMG/M
3300028812|Ga0247825_10555426All Organisms → cellular organisms → Bacteria820Open in IMG/M
3300028878|Ga0307278_10524798All Organisms → cellular organisms → Bacteria517Open in IMG/M
3300028885|Ga0307304_10034858Not Available1793Open in IMG/M
3300030619|Ga0268386_10009874All Organisms → cellular organisms → Bacteria7351Open in IMG/M
3300030620|Ga0302046_10079237All Organisms → cellular organisms → Bacteria → Proteobacteria2669Open in IMG/M
3300031094|Ga0308199_1146053All Organisms → cellular organisms → Bacteria560Open in IMG/M
(restricted) 3300031150|Ga0255311_1006049All Organisms → cellular organisms → Bacteria2378Open in IMG/M
(restricted) 3300031150|Ga0255311_1021131All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1340Open in IMG/M
(restricted) 3300031197|Ga0255310_10240639All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium512Open in IMG/M
3300031455|Ga0307505_10344992All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium703Open in IMG/M
3300031720|Ga0307469_10006696All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria5270Open in IMG/M
3300031720|Ga0307469_10119257All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1904Open in IMG/M
3300031740|Ga0307468_100467352All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium988Open in IMG/M
3300032174|Ga0307470_10035104All Organisms → cellular organisms → Bacteria2429Open in IMG/M
3300032180|Ga0307471_101156008All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium939Open in IMG/M
3300032770|Ga0335085_10003166All Organisms → cellular organisms → Bacteria → Proteobacteria29086Open in IMG/M
3300032782|Ga0335082_11144322All Organisms → cellular organisms → Bacteria → Terrabacteria group645Open in IMG/M
3300033004|Ga0335084_12212742Not Available532Open in IMG/M
3300033233|Ga0334722_10042463All Organisms → cellular organisms → Bacteria3649Open in IMG/M
3300033432|Ga0326729_1053444All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium621Open in IMG/M
3300033550|Ga0247829_10726303All Organisms → cellular organisms → Bacteria827Open in IMG/M
3300033551|Ga0247830_10643722All Organisms → cellular organisms → Bacteria840Open in IMG/M
3300033812|Ga0364926_045416All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium844Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil12.66%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil8.23%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment7.59%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil7.59%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil7.59%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands6.96%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment3.16%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.16%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil3.16%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere2.53%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere1.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.90%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.90%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.90%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil1.90%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment1.27%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment1.27%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.27%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.27%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil1.27%
PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland1.27%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.27%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.27%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.27%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand1.27%
Microbial Mat On RocksEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks1.27%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere1.27%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.27%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment0.63%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater0.63%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.63%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.63%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.63%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.63%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.63%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil0.63%
FossillEnvironmental → Terrestrial → Soil → Fossil → Unclassified → Fossill0.63%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.63%
Bio-OozeEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze0.63%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.63%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.63%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.63%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.63%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.63%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.63%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil0.63%

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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000596Amended soil microbial communities from Kansas Great Prairies, USA - Total DNA no BrdU F1.4TCEnvironmentalOpen in IMG/M
3300000709Amended soil microbial communities from Kansas Great Prairies, USA - Total DNA F1.4 TB amended with BrdU and acetate no abondanceEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001431Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemlyEnvironmentalOpen in IMG/M
3300001661Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)EnvironmentalOpen in IMG/M
3300003347Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PMHost-AssociatedOpen in IMG/M
3300003349Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PMHost-AssociatedOpen in IMG/M
3300003911Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300003994Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2EnvironmentalOpen in IMG/M
3300004025Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D1EnvironmentalOpen in IMG/M
3300004058Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D1EnvironmentalOpen in IMG/M
3300004145Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300005213Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D2EnvironmentalOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005937Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009053Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009166Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015EnvironmentalOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300009814Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60EnvironmentalOpen in IMG/M
3300009819Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_40_50EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010391Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010862Boreal forest soil eukaryotic communities from Alaska, USA - C4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011419Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT357_2EnvironmentalOpen in IMG/M
3300011428Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT615_2EnvironmentalOpen in IMG/M
3300011429Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT600_2EnvironmentalOpen in IMG/M
3300011438Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT500_2EnvironmentalOpen in IMG/M
3300011443Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT630_2EnvironmentalOpen in IMG/M
3300012034Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT526_2EnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012225Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT860_2EnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300014870Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT560_16_10DEnvironmentalOpen in IMG/M
3300014873Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200B_16_10DEnvironmentalOpen in IMG/M
3300014882Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231B'_16_10DEnvironmentalOpen in IMG/M
3300015170Fossil microbial communities from human bone sample from Teposcolula Yucundaa, Mexico - TP48EnvironmentalOpen in IMG/M
3300015252Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT399_16_10DEnvironmentalOpen in IMG/M
3300015254Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT860_16_10DEnvironmentalOpen in IMG/M
3300017974Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MGEnvironmentalOpen in IMG/M
3300017997Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coexEnvironmentalOpen in IMG/M
3300018000Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coexEnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018052Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2EnvironmentalOpen in IMG/M
3300018054Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1EnvironmentalOpen in IMG/M
3300018056Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1EnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018063Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2EnvironmentalOpen in IMG/M
3300018074Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2EnvironmentalOpen in IMG/M
3300018075Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1EnvironmentalOpen in IMG/M
3300018084Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1EnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300019254Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019265Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019458Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaGEnvironmentalOpen in IMG/M
3300019487White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaGEnvironmentalOpen in IMG/M
3300019879Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2EnvironmentalOpen in IMG/M
3300019889Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2c2EnvironmentalOpen in IMG/M
3300019997Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3m2EnvironmentalOpen in IMG/M
3300020061Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c1EnvironmentalOpen in IMG/M
3300021073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redoEnvironmentalOpen in IMG/M
3300021081Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redoEnvironmentalOpen in IMG/M
3300021090Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redoEnvironmentalOpen in IMG/M
3300024330Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300025324Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)EnvironmentalOpen in IMG/M
3300025535Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300025549Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025885Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025957Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300025965Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025971Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025973Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300026002Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_202 (SPAdes)EnvironmentalOpen in IMG/M
3300026015Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_401 (SPAdes)EnvironmentalOpen in IMG/M
3300026285Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026469Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-BEnvironmentalOpen in IMG/M
3300026499Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-BEnvironmentalOpen in IMG/M
3300027381Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027462Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027647Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38 HiSeqEnvironmentalOpen in IMG/M
3300027799 (restricted)Sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Sediment_Towuti_2014_0_MGEnvironmentalOpen in IMG/M
3300027815Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300028787Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381EnvironmentalOpen in IMG/M
3300028803Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120EnvironmentalOpen in IMG/M
3300028812Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48EnvironmentalOpen in IMG/M
3300028878Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117EnvironmentalOpen in IMG/M
3300028885Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185EnvironmentalOpen in IMG/M
3300030619Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)EnvironmentalOpen in IMG/M
3300030620Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111EnvironmentalOpen in IMG/M
3300031094Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_203 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031150 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4EnvironmentalOpen in IMG/M
3300031197 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1EnvironmentalOpen in IMG/M
3300031455Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_SEnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032782Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1EnvironmentalOpen in IMG/M
3300033004Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4EnvironmentalOpen in IMG/M
3300033233Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottomEnvironmentalOpen in IMG/M
3300033432Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF6AY SIP fractionEnvironmentalOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M
3300033812Sediment microbial communities from East River floodplain, Colorado, United States - 65_j17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
KanNP_Total_noBrdU_T14TCDRAFT_101186323300000596SoilMTAVTGSLGVGRRGRNILLGXLLGXTALGLFSGCAGMPQGPTYTEAELKAQCERRGGWWRGNLIPGLCEYQAASLQSP*
KanNP_Total_F14TBDRAFT_101349323300000709SoilMTAVTGSLGVGRRGRNILLGALLGATALGLFSGCAGMPQGPTYTEAELKAQCERRGGWWRGNLIPGLCEYQAASLQSP*
JGI10216J12902_10975417523300000956SoilMTAVTPSRGVGGTGRKILLGALLSAAALGMFSGCAGMPQGPTYTEAELKAQCERRGGWWRGNLIPGFCEYQAASMQSP*
F14TB_10096191313300001431SoilMTAVTGSLGVGRRGRNILLGSLLGTTALGLFSGCAGMPQGPTYTEAELKAQCERRGGWWRGNLIPGLCEYQAASLQSP*
JGI12053J15887_1030810923300001661Forest SoilMTTRKILLGLLLAAGAAGLFSACSTMPQGPTYTDAELKAICERRGGWWRGELIAGYCEFQSASLAP*
JGI26128J50194_100410313300003347Arabidopsis Thaliana RhizosphereMTAVTVSRVGRRGKNVLLGALLGAAALGLLSGCASMPQGPTYTDAELRAQCERRGGWWRGNLIPGFCEYQSASLQSP*
JGI26129J50193_100046243300003349Arabidopsis Thaliana RhizosphereTAVTVSRVGRRGKNVLLGALLGAAALGLLSGCASMPQGPTYTDAELRAQCERRGGWWRGNLIPGFCEYQSASLQSP*
JGI25405J52794_1015254213300003911Tabebuia Heterophylla RhizosphereMIAVKTARCEAAGRKVLLGALLGAAALGLFSGCAGMPQGPTYTQEELKAQCERRGGWWRGNLIPDLCEYQSASLQSP*
Ga0055435_1000124623300003994Natural And Restored WetlandsMTRKILLGVLLAAGASGLFSACSTMPQGPTYTDAELQAICERRGGWWRGEVVAGYCEFQSAWLAP*
Ga0055433_1009212413300004025Natural And Restored WetlandsMTRKILLGVLLAAGASGLFSACSTMPQGPTYTDAELRAICERRGGWWRGEVVAGYCE
Ga0055498_1002578913300004058Natural And Restored WetlandsMKTRKILLGVFLAGAAAGLFSGCSSMAQGPTYTDAELRASCERRGGWWRGDLIAGYCEFQSASLAP*
Ga0055489_1004190913300004145Natural And Restored WetlandsMRTRKILLGVLLTAAAAGLFSGCGTMAQGPTYTDAELRAICERRGGWWRGDLIAGYCEFQSASLAP*
Ga0062589_10020540133300004156SoilGKNVLLGALLGAAALGLLSGCASMPQGPTYTDAELRAQCERRGGWWRGNLIPGFCEYQSASLQSP*
Ga0062589_10061130923300004156SoilMTIRKILLGVLLVAATCGLFSACSTMPQGPTYTDAELKAICERRGGWWRGELIAGYCEFQSASLAP*
Ga0063356_10007879623300004463Arabidopsis Thaliana RhizosphereMTTRKLLLALLLAAGVCGLFTACSSMPQGPTYTDAELRAMCERRGGWWRGDLIAGFCEFQSAALAP*
Ga0068998_1007669723300005213Natural And Restored WetlandsMTRKVLLGVLLAAGASGLFSACSTMPQGPTYTDAELRASCERRGGWWRGELVAGYCEFQSASLAP*
Ga0065705_1065538113300005294Switchgrass RhizosphereMTTRKILLGLLLAAGAAGLFSACSTMPQGPTYTDAELKAICERRGGWWRGELIAGYCEFQ
Ga0065707_1021381223300005295Switchgrass RhizosphereMTTRKILLGVLLLAATCGLFGACSTMPQGPTYTDAELKAMCERRGGWWRGELIAGFCEFQSASLAP*
Ga0065707_1052159823300005295Switchgrass RhizosphereMTTRKILLGALLVAATCGLFSACSTMPQGPTYTDAELKATCERRGGWWRGELIAGYCEFQSASLAP*
Ga0066388_10013555833300005332Tropical Forest SoilVLICAAASSCLGGCAGWPQTPTYTDAELKANCERRGGWWRGELIAGYCEFQGASLAQ*
Ga0066388_10297985123300005332Tropical Forest SoilVPTIGNTPSRRSRRLVASLLLVAGAGGLVGGCAGWSGPQKPTYTDAELKASCERRGGWWRGDLIA
Ga0070669_10009879943300005353Switchgrass RhizosphereMTIRKVLLGVLLVAATCGLFSACSTMPQGPTYTDAELKAICERRGGWWRGELIAGYCEFQSASLAP*
Ga0070681_1112446923300005458Corn RhizosphereMTTRKLLLALLLAAGVCGLFTACSSMPQGPTYTDAELRAMCERRGGWWRGDLIAGFCEFQ
Ga0068867_10041358423300005459Miscanthus RhizosphereTIRKILLGVLLVAATCGLFSACSTMPQGPTYTDAELKAICERRGGWWRGELIAGYCEFQSASLAP*
Ga0066905_10000319523300005713Tropical Forest SoilMTAVTVSRGVGRRGWNILLGALLGATALGLFSGCAGMPQGPTYTEAELKAQCERRGGWWRGSLIPGFCEYQAASLQSP*
Ga0066903_10002794533300005764Tropical Forest SoilVKPWTPARWLAAVLICAAASSCLGGCAGWPQTPTYTDAELKANCERRGGWWRGELIAGYCEFQGASLAQ*
Ga0066903_10526261713300005764Tropical Forest SoilMRGQAMTTRGIRRAVAVAMLTAAGVGLFGGCSTAPIPPTYTDAELKDMCLRKGGWWRGDLIAGYCEFQSASLP*
Ga0081455_1008896943300005937Tabebuia Heterophylla RhizosphereMTAVTVSRGVGRRGRNILLGALLGATALGLFSGCAGMPQGPTYTEAELKAQCERRGGWWRGNLIPGFCEYQAASLQSP*
Ga0075431_10062428723300006847Populus RhizosphereMITRKILLGVLLVAGAGGLFTACSSMPQGPTYTDDELRAACERRGGWWRGELIAGFCEFQSASFAP*
Ga0099829_1000334443300009038Vadose Zone SoilMTTRKILLGVLLAAGVASLFSACSTMPQGPTYTDAELRAICERRGGWWRGELIAGYCEFQSASLAP*
Ga0105095_1006904823300009053Freshwater SedimentMTTRKILLGVLLAAGAAGFFSACSTMPQGPTYTDAELRAICERRGGWWRGDLIAGFCEFQSASLAP*
Ga0099830_1002422623300009088Vadose Zone SoilMTTRKILLGVLLAAGVAGLFSACSTMPQGPTYTDAELRAICERRGGWWRGELIAGYCEFQSASLAP*
Ga0099827_1061983223300009090Vadose Zone SoilMTTRKILLGVLLAAGAAGLFSACSTTPLGPTYTDAELKASCERRGGWWRGELIAGYCEFQSASLARPEAP*
Ga0105245_1063868923300009098Miscanthus RhizosphereMERMEGGMTIRKILLGVLLVAATCGLFSACSTMPQGPTYTDAELKAICERRGGWWRGELIAGYCEFQSASLAP*
Ga0114129_1004201573300009147Populus RhizosphereMNTRKILLGLLLAAGAAGLFSACSTMPQGPTYTDAELKAICERRGGWWRGELIAGYCEFQSASLAP*
Ga0105100_1075053723300009166Freshwater SedimentMTTRKILLGVLLAAGAAGFFSACSTMPQGPTYTDAELRAICERRGGWWRGDLIAGYCEFQSASL
Ga0105249_1075194613300009553Switchgrass RhizosphereMERMEGGMTIRKILLGVLLVAATCGLFSACSTMPQGPTYTDAELKAICERRGGWWRG
Ga0126374_1078036623300009792Tropical Forest SoilMTWMEPAARRTMRRFLAALLLCAGAAGLLSACAGMPQTPTYTDAELKAMCERRGGWWRGDLIAGYCEFQSASLIQSP*
Ga0105082_103751523300009814Groundwater SandMPITQRLLGGALIAAGLCALLAGCAGLPQGPTYTDAELRAICERRGGWWRGEVIAGYCEYQTASITQAP*
Ga0105087_106564213300009819Groundwater SandMPITQRLLGGALIAAGLCALLAGCAGLPQGPTYTDAELRAICERRGGWWRGALIAGYCEYQSASLREAP*
Ga0126382_1026471113300010047Tropical Forest SoilLKLVGAALLCVGVAGVLGGCAGWPQAPTYTDAELKAMCERRGGWWRGDLIAGYCEFQAASLSQSP*
Ga0126382_1029704023300010047Tropical Forest SoilMTAVTVSRGVGRRGRNILLGALLGATALGLFSACAGMQQGPTYTEAELKAQCERRGGWWRGSLIPGFCEYQAASLQSP*
Ga0126373_1118503723300010048Tropical Forest SoilMTAVGSTSLTLRKILLGAVLAVILAGLFTGCASMPQGPTYTDDELKAICERRGGWWRGNLIAGYCEFQLASQAP*
Ga0126376_1010512923300010359Tropical Forest SoilMTAVGSTSLALRKILLGAVFAVILSGLFAGCASLPQGPTYTDDELKAICERRGGWWRGNLIAGYCEFQLASQAP*
Ga0126372_1001671933300010360Tropical Forest SoilMTAVGSTSLALRKILLGAVLAAILAGCASMPQGPTYTDDELKAICERRGGWWRGNLIAGYCEFQLASQAP*
Ga0126372_1191920923300010360Tropical Forest SoilMLTAAGVGLFGGCSTAPIPPTYTDAELKDMCLRKGGWWRGDLIAGYCEFQSASLP*
Ga0126378_1100314923300010361Tropical Forest SoilMRRFLAALLLCAGAAGLLSACAGMPQTPTYTDAELKAMCERRGGWWRGDLIAGYCEFQ
Ga0126377_1041883823300010362Tropical Forest SoilMTAVTVSRGGGRRGKNVILGVLLSAAALGLFSGCAGMPQGPTYTDEELRAQCERRGGWWRGNLIPGFCEYQAAGLQSP*
Ga0126379_1277449623300010366Tropical Forest SoilAARRTMRRFLAALLLCAGAAGLLSACAGMPQTPTYTDAELKAMCERRGGWWRGDLIAGYCEFQSASLIQSP*
Ga0136847_1274654023300010391Freshwater SedimentMKARKILLGVLLAVSAAGLFSACSTMPQGPTYTDAELRASCERRGGWWRGDLIAGYCEFQTASQAP*
Ga0126383_1235283413300010398Tropical Forest SoilRRTMRRFLAALLLCAGAAGLLSACAGMPQTPTYTDAELKAMCERRGGWWRGDLIAGYCEFQSASLIQSP*
Ga0134122_1038301723300010400Terrestrial SoilMTTRKLLLALLLAAGVCGLFTACSSMPQGPTYTDAELRAMCERRGGWWRGYLIAGFCEFQSASLAP*
Ga0126348_130198823300010862Boreal Forest SoilRMTTRKILLGVLLAAGAAGLFTACSSMPQGPTYTDAELRVICERRGGWWRGELIAGFCEFQSASLSR*
Ga0137446_103409823300011419SoilMTTRNILLGALLVAGACGLFTACSSMPQGPTYTDDELRAICERRGGWWRGELIAGYCEFQSPSFAP*
Ga0137456_115230913300011428SoilMKTRKILLGVLLAVAAAGLFSACSSMPQGPTYTDAELRAICERRGGWWRGELIAGFCEFQSASLAP*
Ga0137456_119324313300011428SoilMTTRNILLGALLAAGACGLFTACSSMPQGPTYTDDELRAICERGGGWWRGELIAGYCEFQSPSFAP*
Ga0137455_116975323300011429SoilMTTRKILLGVLVAAGVAGLFSACSTMPQGPTYTDAELRAICERRGGWWRGELIAGYCEFQSASLAP*
Ga0137451_101816533300011438SoilMTTRKILLGVLLAAGVAGLFSACSTMPQGPTYTDAELRAICEHRSG*
Ga0137457_111888523300011443SoilMTTRKILLGVLLTAAAAGLFSACSTMPQGPTYTDAELRAICERRGGWWRGDLIAGFCEFQSASLAP*
Ga0137453_109803713300012034SoilLGVLLAAAAAGLFSACSTMPQGPTYTDAELRAICERRGGWWRGELIAGFCEFQSASFAP*
Ga0137399_1009980523300012203Vadose Zone SoilMTTRKILLGLLLAASAAGLFSACSTMPQGPTYTDAELKAICERRGGWWRGELIAGYCEFQSASLAP*
Ga0137434_100214723300012225SoilMTTRKILLGVLLTAAAAGLFSACSTMPQGPTYTDDELRAICERRGGWWRGELIAGYCEFQSPSSGWQ*
Ga0137375_1069580923300012360Vadose Zone SoilMKIRKILLGALLLATTCGLFSACSTMPQGPTYTDAELRAICERRGGWWRGELIAGFCEFQSASLAP*
Ga0137397_1002925223300012685Vadose Zone SoilMTTRKILLGLLLAAGAAGLFSACSTMPQGPTYTDAELKAICERRGGWWRGELIAGFCEFQSASLAP*
Ga0137404_1006830213300012929Vadose Zone SoilMEGGMTTRKILLGALLAAATCGLFSACSTMSQGPTYTDAELKAICERRGGWWRGELIAGYCEFQS
Ga0137404_1027415613300012929Vadose Zone SoilMTTRKILLGLLLAAGAAGLFSACSTMPQGPTYTDAELKAICERRGGWW
Ga0137410_1085219113300012944Vadose Zone SoilMEGGMTTRKILLGALLAAATCGLFSACSTMSQGPTYTDAELKAICERRGGWWRGELIAG
Ga0126369_1014144043300012971Tropical Forest SoilVKPWTPARWLAAVLICAAASSCLGGCAGWPQTPTYTDAELKANCERRGGWWRGELIAG
Ga0180080_101627923300014870SoilMKTRKILLGVLLAAAAAGLFTACSTMPQGPTYTDAELRAICERRGGWWRGELIAGYCEFQSASLAP*
Ga0180066_100953113300014873SoilMTTRNILLGALLAAGACGLFTACGSLPQGPTYTDDELRAICERRGGWWRGELIAGYCEFQSASLAP*
Ga0180069_118238113300014882SoilMTTRNILLGALLVAGACGLFTACSSMPQGPTYTDDELRAICERRGGWWRGELIAGYCEFQSPS
Ga0120098_103243223300015170FossillMITRKILLGVLLVAGACGLFTACSSMPPGPTYTDDELRAICERRGGWWRGELIAGFCEFQSASFAP*
Ga0180075_109169323300015252SoilMTTRNILLGALLVAGACGLFTACSSMPQGPTYTDDELRAICERRGGWWRGELIAGYCEF
Ga0180089_101941113300015254SoilMTTRNILLGALLAAGACGLFTACGSLPQGPTYTDDELRAICERNGGWWRGELIAGYC
Ga0187777_1016591123300017974Tropical PeatlandMTRTMRGRFLLGILLAAGLCGLLVGGCVQYPQVPSTYKDLELKASCERRGGWWRGDLIAGFCEFQSAQAP
Ga0184610_114228623300017997Groundwater SedimentMTTRKILLGVLLAAGVAGLFSACSTMPQGPTYTDAELRAICERRGGWWRGELIAGYCEFQSASLAP
Ga0184604_1001671713300018000Groundwater SedimentMTTRKILLGLLLAAGAAGLFSACSTMPQGPTYTDAELKAICERRGGWWRGELIAGFCEFQSASLAP
Ga0184608_1041202423300018028Groundwater SedimentMTTRKILLGLLLAAGAAGFFSACSTMPQGPTYTDAELRAICERRGGWWRGELIAGYCEFQSASLAP
Ga0184638_108006913300018052Groundwater SedimentMTTRKILLGLLLAAGAAGLFSACSTMPQGPTYTDAELRAICERRGG
Ga0184621_1030931323300018054Groundwater SedimentMTTRKILLGVLLAAGVAGLFSACSTMPQGPTYTDAELRAICERRGGWWRGPLIPGFGEYQSASTFP
Ga0184623_1033132223300018056Groundwater SedimentMTTRKILLGALLVAGACGLFTACSSMPQGPTYTDDELRAICERRGGWWRGPLIPGFCEYQSTSTFP
Ga0184619_1014961323300018061Groundwater SedimentMTTRKILLGLLLAAGAAGLFSGCSTMPQGPTYTDAELKAICERRGGWWRGELIAGFCEFQSASLAP
Ga0184637_1012976223300018063Groundwater SedimentMPITQRLLGGALIAAGVCGLLAGCAGLPQGPTYTDAELRAICERRGGWWRGEVIAGYCEYQTASTSQAP
Ga0184640_1007933913300018074Groundwater SedimentMTTRKILLGVLLAAGSTGLFSACSAMPPGPTYSDDELRVMCERRGG
Ga0184640_1019403423300018074Groundwater SedimentMTTRNILLGALLAAGVGGLFTACSSMPQGPTYTDDELRAICERNGGWWRGELIAGYCEFQLPSSGFP
Ga0184632_1035862123300018075Groundwater SedimentMTTRKILLGALLVAGACGLFTACSSMPQGPTYTDDELRAICERRGGWWRGQLIAGFCEFQSASFAP
Ga0184629_1024376223300018084Groundwater SedimentMTTREILLGALLAACACGLFSACSSMPQGPTYTDAELRAICERQGGWWRGDLIAGYCEYQSPSAGFP
Ga0190265_1008996123300018422SoilMITRKILLGVLLVAGAGGLFTACSSMPPGPTYTDDELRAICERRGGWWRGELIAGFCEFQSASFAP
Ga0190265_1030028223300018422SoilMKIRKILLGVLLAAAAAGLFSGCSGMPQGPTYTDAELKASCERRGGWWRGELIAGFCEFQSASFSP
Ga0190265_1063753823300018422SoilMRKILLGALLVAVTCSLFTACSTMSQGPTYTDAELRAICERRGGWWRGDLIAG
Ga0190265_1068831013300018422SoilMKTRKILLGVLLAAAAAGLFSACSTMPQGPTYTAAELRAICERRGGWWRGDLIAGFCEFQSASFGP
Ga0190265_1122746523300018422SoilMRIRKILLGALLVAATCSLFAACTTMPQGPTYTDAELRAICERRGGWWRGDLIAGYCEFQSASLAP
Ga0190272_1028561213300018429SoilMTTRKILLGVLLGAGVAGLFSACSTMPQGPTYTDAELRAICERRGGWWRGELIAGYCEFQSASLAP
Ga0190272_1253670723300018429SoilMKTRKILLGVLLAAAAAGLFSACSTMPQGPTYTDAELRAICERRGGWWRGDLIAGFCEFQSASLAP
Ga0184641_104763213300019254Groundwater SedimentMTTRKILLGLLLAAGAAGLFSACSTMPQGPTYTDAELKAICERRGGWWRGELIAGYCEFQSASLAP
Ga0187792_118832223300019265PeatlandMKPRTPTRWLAVVLICAAASGYLGGCAGWPQAPTYTDAELRAICERRGGWWRGDLIAGYCEFQSAAAVP
Ga0187792_126743813300019265PeatlandMKPRPPTRWLAAVLICAAATGLLGGCAGWPDTPTYTDAELRAICERRGGWWRGDLIAGYCEFQSAAAVP
Ga0187892_1003131753300019458Bio-OozeMITRKILLGVLLVAGAAGLLTACSSMPQGPTYTDDELRAACERRGGWWRGELIAGFCEFQSASFGGR
Ga0187893_1004841423300019487Microbial Mat On RocksMITRKLLLGVLLVAGVCGLLTACSSMPQGPTYTDDELRAACERRGGWWRGELIAGFCEFQSASFGGR
Ga0187893_1077095113300019487Microbial Mat On RocksMPITQGKTTRAPRRLAAGTLIVVGVCALLAGCAGLPQGPTYTDAELKAICERQGGWW
Ga0193723_100578633300019879SoilMTIRKILLGALLVAATCGLFSACSTMPQGPTYTDAELKAICERRGGWWRGELIAGYCEFQSASLAP
Ga0193743_106136623300019889SoilMRTRKILLGALLVAATCGLLTACSTMPQGPTYTDAELRAICERRGGWWRGDLIAGYCEFQSASLAP
Ga0193711_100939823300019997SoilMTTRKILLGALLVAATCGLFSACSTMPQGPTYTDAELKAICERRGGWWRGELIAGYCEFQSASLAP
Ga0193716_124791413300020061SoilMTTRKILLGVLLVAAAAGLLSACSTMPQGPTYTDTELRAMCERRGGWWRGDLIAGFCEFQSASLAP
Ga0210378_1007275723300021073Groundwater SedimentMTTRKILLGVLLAAGAAGLFSACSTMPQGPTYTDAELRAICERRGGWWRGELIAGYCEFQSASLAP
Ga0210379_1021126823300021081Groundwater SedimentMTTRKILLGVLLAAGVAGLFSACSTMPQGPTYTDAELRAMCERRGGWWRGELIAGYCEFQSASLAP
Ga0210379_1025687323300021081Groundwater SedimentMTTRNILLGALLVAGACGLFTACSSMPQGPTYTDDELRAICERRGGWWRGELIAGYCEFQSPSFAP
Ga0210377_1000743263300021090Groundwater SedimentMTTRNILLGALLAAGACGLFTACGSLPQGPTYTDDELRAICERNGGWWRGELIAGYCEFQSPSSGFP
Ga0137417_104942313300024330Vadose Zone SoilMTTRKILLGLLLAAGAAGLFSACSTMPQGPTYTDAELKAICERRGGWWRG
Ga0209640_1001229363300025324SoilMTTVKAIIVGALLGAGAGGLLTACGSMPHGPTYTDAELQAACERRGGWWRGNLIPGYCESQSTALP
Ga0207423_100142743300025535Natural And Restored WetlandsMTRKILLGVLLAAGASGLFSACSTMPQGPTYTDAELRAICERRGGWWRGEVVAGYCEFQSAWLAP
Ga0210094_103861823300025549Natural And Restored WetlandsMTRKILLGVLLAAGASGLFSACSTMPQGPTYTDAELQAICERRGGWWRGEVVAGYCEFQSAWLAP
Ga0207653_1032179523300025885Corn, Switchgrass And Miscanthus RhizosphereMTIRKILLGVLLVAATCGLFSACSTMPQGPTYTDAELKAICERRGGWWRGELIAGYCEFQSASLAP
Ga0207660_1082857623300025917Corn RhizosphereMTTRKLLLALLLAAGVCGLFTACSSMPQGPTYTDAELRAMCERRGGWWRGDLIAGFCEFQSAALAP
Ga0207646_1192699213300025922Corn, Switchgrass And Miscanthus RhizosphereLGALLAAAAGGFLGACSSMPQGPTYTEDELRVICERRGGWWRGNLIPGFCEYQTASNQAP
Ga0207706_1002305853300025933Corn RhizosphereMTAVTVSRVGRRGKNVLLGALLGAAALGLLSGCASMPQGPTYTDAELRAQCERRGGWWRGNLIPGFCEYQSASLQSP
Ga0210089_101533313300025957Natural And Restored WetlandsPSCMGRTGGGTMTRKVLLGVLLAAGASGLFSACSTMPQGPTYTDAELRASCERRGGWWRGELVAGYCEFQSASLAP
Ga0210090_101939923300025965Natural And Restored WetlandsMTRKVLLGVLLAAGASGLFSACSTMPQGPTYTDAELRASCERRGGWWRGELVAGYCEFQSASLAP
Ga0210102_105452913300025971Natural And Restored WetlandsALLGAAACGLFAGCASMPQGPTYTDAELQAMCERRGGWWRGSLIPGYCEYQSASLQSP
Ga0210145_101679823300025973Natural And Restored WetlandsLLAAGASGLFSACSTMPQGPTYTDAELRASCERRGGWWRGELVAGYCEFQSASLAP
Ga0208907_10495223300026002Rice Paddy SoilMPTIERSCRRIVLTALLGAAAGGLFAACSSLPQGPTYTEAELRAACERHGGWWR
Ga0208286_100108713300026015Rice Paddy SoilMPTIERSCRRIVLTVLLGAAAGGLFAACSALPQGPTYTEEELRAACERHGGWWRGSLIPGYCEFQTA
Ga0209438_1000025243300026285Grasslands SoilMTTRKILLGALLAAATCGLFSACSTMSQGPTYTDAELKAICERRGGWWRGELIAGYCEFQSASLAP
Ga0257169_100354913300026469SoilMTTRKILLGVLLAAGVAGLFSACSTMPQGPTYTDAELKAICERRGGWWRGELIAGFCEFQ
Ga0257181_101368123300026499SoilMTTRKILLGVLLAAGVAGLLSACSTMPQGPTYTDAELRAICERRGGWWRGELIAGYCEFQSASLAP
Ga0208983_102956223300027381Forest SoilMTTRKILLGLLLAAGTAGLFSACSTMPQGPTYTDAELKAICERRGGWWRGELIAGFCEFQSASLAP
Ga0210000_102229923300027462Arabidopsis Thaliana RhizosphereNVLLGALLGAAALGLLSGCASMPQGPTYTDAELRAQCERRGGWWRGNLIPGFCEYQSASLQSP
Ga0214468_105794713300027647SoilMNTGRKILFGVLLGAGACGLFAACSSVPHGSAYTLAELQAACEREGGWWRGSLLPGYCESQSTTLP
(restricted) Ga0233416_1020607423300027799SedimentMRITRVLLALSVGGALLTGCAGLPHGPTYTDAELRAICERQGGWWRGALIAGYCEYQTAALPQAP
Ga0209726_1009658843300027815GroundwaterMTTRKILLGALLAAAACGLFTACSSLPQGPTYTDDELRAICERRGGWWRGEVIAGYCEFQSASFAP
Ga0209180_1001641863300027846Vadose Zone SoilMTTRKILLGVLLAAGVASLFSACSTMPQGPTYTDAELRAICERRGGWWRGELIAGYCEFQSASLAP
Ga0209590_1094786823300027882Vadose Zone SoilMTTRKILLGVLLAAGAAGLFSACSTTPLGPTYTDAELKASCERRGGWWRGELIAGYCEF
Ga0307282_1010272413300028784SoilKILLGLLLAAGAAGLFSACSTMPQGPTYTDAELKAICERRGGWWRGELIAGFCEFQSASLAP
Ga0307323_1009179123300028787SoilMTTRKILLGLLLAAGAGGLFSACSTMPQGPTYTDAELKAICERRGGWWRGELIAGYCEFQSASLAP
Ga0307281_1000153933300028803SoilMTSREILLGALLAACACGLFSACSSMPQGPTYTDAELRAICERRGGWWRGDLIAGYCEYQSPSAGFP
Ga0247825_1055542623300028812SoilMTIRKILLGVLLVAATCGLFSACSTMPQGPTYTDAELKAICERRGGWWRGEL
Ga0307278_1052479823300028878SoilAGPHPSCMRWTARGMTTRKILLGLLLAAGAAGLFSACSTMPQGPTYTDAELKAICERRGGWWRGELIAGYCEFQSASLAP
Ga0307304_1003485833300028885SoilRKILLGLLLAAGAAGLFSACSTMPQGPTYTDAELKAICERRGGWWRGELIAGFCEFQSASLAP
Ga0268386_1000987473300030619SoilMNTGRKILLGVLLSAGAGGLFAACSAVPHGPAYTEVELQAACERVGGWWRGSLIPDYCESQSTAFP
Ga0302046_1007923723300030620SoilMNTGRKILLGVLLSAGAGGLFAACSSVPHGPAYTEVELQAACERVGGWWRGSLIPDYCESQSTAFP
Ga0308199_114605323300031094SoilEPEPAGPHPSCMRWTGRGMTTRKILLGLLLAAGAAGLFSACSTMPQGPTYTDAELKAICERRGGWWRGELIAGFCEFQSASLAP
(restricted) Ga0255311_100604933300031150Sandy SoilMTIRKILLGVLLLAATCGLFSACSTMPQGPTYTDAELKAMCERRGGWWRGELIAGFCEFQSASLAP
(restricted) Ga0255311_102113143300031150Sandy SoilMRARKILLGVLLTAAAAGLFSGCGTMAQGPTYTDAELRAICERRGGWWRGDLIAGYCEFQSASLAP
(restricted) Ga0255310_1024063913300031197Sandy SoilTRKILLAVLLAAGAAGLFSACSTMPQGPTYTDAELRAMCQRRGGWWRGELIAGYCEFQSASLAP
Ga0307505_1034499213300031455SoilMKTRKILLGVLLAVAAAGLFSACSSMPQGPTYTDAELRAICERRGGWWRGELIAGFCEFQSASLAP
Ga0307469_1000669643300031720Hardwood Forest SoilMTTRKILLGALLVAATCGLFSACSTMPQGPTYTDAELKASCERRGGWWRGELIAGYCEFQSASLAP
Ga0307469_1011925723300031720Hardwood Forest SoilMITRKLLLAMLLAAGACGLFTACSSLPQGPTYTDAELQAMCERRGGWWRGNLIAGFCEFQTASFGP
Ga0307468_10046735223300031740Hardwood Forest SoilMRIRKVLFGVLLAAAAAGLFSGCSSMAQGPTYTDAELKASCERRGGWWRGELIAGF
Ga0307470_1003510433300032174Hardwood Forest SoilMRIRKVLFGVLLAAAAAGLFSGCSSMAQGPTYTDAELKASCERRGGWWRGELIAGFCEFQTASFGP
Ga0307471_10115600823300032180Hardwood Forest SoilMTTRKILLGALLVAATCGLFSACSTMPQGPTYTDAELKASCERRGGWWRGELIAGFCEFQTASFGP
Ga0335085_10003166163300032770SoilMIAVTMTTGLGRKILLGVLLGAAACGLFSGCASMPQGPTYTDAELQAMCERRGGWWRGNLIPGYCEYQSASLQSP
Ga0335082_1114432213300032782SoilRWLAAVLICAAASGLLGGCAGWPDTPTYTDAELRAICERRGGWWRGDLIAGYCEFQSAAAVP
Ga0335084_1221274213300033004SoilMTAVTMTTGLGRKILLGVLLGAAGCGLFSGCASMPQGPTYTDAELQAMCERRGGWWRGNLIPGYCEYQSASLQSP
Ga0334722_1004246333300033233SedimentMKTRKILLAVLLAAGAAGLFSACSTMPQGPTYSDAELRVMCQRRGGWWRGELIAGYCEFQSASLAP
Ga0326729_105344413300033432Peat SoilSARRRLVLGALLVAAAGGLLTACSSMPPGPTYTEDELRIICERRGGWWRGNLIPGYCEFQSASLTQSP
Ga0247829_1072630313300033550SoilMTTRKILLGVLLLAATCGLFGACSTMPQGPTYTDAELKAMCERRGGWWRGELI
Ga0247830_1064372223300033551SoilMTTRKILLGVLLLAATCGLFGACSTMPQGPTYTDAELKAMCERRGGWWRGELIAGFC
Ga0364926_045416_401_6013300033812SedimentMTTRKILLGALLVAGACGLFTACSSLPQGPTYTDDELRAICERRGGWWRGQLIAGFCEFQSASFAP


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