Metagenome Family F042616

Basic Information
Family ID	F042616
Family Type	Metagenome
Number of Sequences	158
Average Sequence Length	69 residues
Representative Sequence	MDVTVAISAERDQIFVCVVTQQASRANVVDLETIGTAAVLASPAVTLQHFGAEFAIRIWVQPKSRSSRLEITN
Number of Associated Samples	69
Number of Associated Scaffolds	158

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	54.43 %
% of genes near scaffold ends (potentially truncated)	29.11 %
% of genes from short scaffolds (< 2000 bps)	80.38 %
Associated GOLD sequencing projects	64
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Bacteria (98.734 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil (34.177 % of family members)
Environment Ontology (ENVO)	Unclassified (65.823 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.000 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106 1JGI12712J15308_100824642 2JGI12627J18819_100026525 3JGI12627J18819_100220335 4JGI12627J18819_100566012 5JGI12627J18819_101272902 6JGI12627J18819_103919542 7JGIcombinedJ26739_1000805963 8JGIcombinedJ26739_1008006802 9Ga0070697_1002380062 10Ga0070731_100368955 11Ga0070731_100557984 12Ga0070731_100586842 13Ga0070731_102881332 14Ga0070731_103705552 15Ga0070732_109374902 16Ga0070763_105279912 17Ga0066903_1003092302 18Ga0070766_102661242 19Ga0070766_104012952 20Ga0070766_111302782 21Ga0070717_108306291 22Ga0070717_121188552 23Ga0099829_106058602 24Ga0126373_100379296 25Ga0153921_10218221 26Ga0153922_10325641 27Ga0153922_10485362 28Ga0153922_11000841 29Ga0137388_117379201 30Ga0153928_11036491 31Ga0137359_104442772 32Ga0137359_112086882 33Ga0137359_112912392 34Ga0210407_101373522 35Ga0210407_101572333 36Ga0210407_102461863 37Ga0210407_109495851 38Ga0210403_100489093 39Ga0210403_105366741 40Ga0210403_107252922 41Ga0210403_113862761 42Ga0210399_100756055 43Ga0210399_101521512 44Ga0210399_101862582 45Ga0210401_100668692 46Ga0210401_106390572 47Ga0210406_100544123 48Ga0210406_101604732 49Ga0210406_106915461 50Ga0210405_100145282 51Ga0210405_110370642 52Ga0210408_115211731 53Ga0210388_114903102 54Ga0210393_108601822 55Ga0210389_114609091 56Ga0210387_109628922 57Ga0210387_111448202 58Ga0210387_112764052 59Ga0210387_116061372 60Ga0210386_115321412 61Ga0210383_101105632 62Ga0210383_114535091 63Ga0210384_109376562 64Ga0210392_102102022 65Ga0210402_103509352 66Ga0210402_114767761 67Ga0210410_112944681 68Ga0210409_115324381 69Ga0126371_100583342 70Ga0207685_102726391 71Ga0209325_10331181 72Ga0209729_10166472 73Ga0209214_10634332 74Ga0209214_10638762 75Ga0209418_10065591 76Ga0209622_10131991 77Ga0209329_11024331 78Ga0209625_10118512 79Ga0209579_100039784 80Ga0209579_100351554 81Ga0209579_102741971 82Ga0209579_104163251 83Ga0209275_107356052 84Ga0209380_100657824 85Ga0209380_108742111 86Ga0209006_100748762 87Ga0209526_100360595 88Ga0308309_100140163 89Ga0308309_111586192 90Ga0308309_113839761 91Ga0170834_1031048752 92Ga0170834_1092645514 93Ga0170834_1100175011 94Ga0170834_1141170101 95Ga0170823_161806961 96Ga0170824_1054712441 97Ga0170824_1089211931 98Ga0170824_1225172192 99Ga0170818_1122861001 100Ga0310686_1139547463 101Ga0307476_101354352 102Ga0307476_108387511 103Ga0307474_100665202 104Ga0307474_102527712 105Ga0307474_103175742 106Ga0307474_104426052 107Ga0307474_106399521 108Ga0307474_112013961 109Ga0307469_101319032 110Ga0306918_114850081 111Ga0307477_101347942 112Ga0307477_106708581 113Ga0307475_100149234 114Ga0307475_100856174 115Ga0307475_101617791 116Ga0307475_102953302 117Ga0307475_103100243 118Ga0307475_103450512 119Ga0307475_103651151 120Ga0307475_105715971 121Ga0307475_107058481 122Ga0307475_108045202 123Ga0307475_110428572 124Ga0307475_112479062 125Ga0307475_113291482 126Ga0307475_114428501 127Ga0318546_105199141 128Ga0307473_100698913 129Ga0307478_105054301 130Ga0306921_110516591 131Ga0307479_100305583 132Ga0307479_100879194 133Ga0307479_101442821 134Ga0307479_101896692 135Ga0307479_103184362 136Ga0307479_103972662 137Ga0307479_105000392 138Ga0307479_105271872 139Ga0307479_106006172 140Ga0307479_107809492 141Ga0307479_108059293 142Ga0307479_109835411 143Ga0307479_112600252 144Ga0307479_112779402 145Ga0307479_113728772 146Ga0307479_119717431 147Ga0307471_1000970274 148Ga0307471_1002575581 149Ga0307471_1007736852 150Ga0307471_1011537892 151Ga0307471_1012788052 152Ga0307471_1020830581 153Ga0307471_1023110442 154Ga0307472_1000041513 155Ga0307472_1006791482 156Ga0307472_1016835131 157Ga0307472_1017377621 158Ga0335085_100696406
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106 1JGI12712J15308_100824642 2JGI12627J18819_100026525 3JGI12627J18819_100220335 4JGI12627J18819_100566012 5JGI12627J18819_101272902 6JGI12627J18819_103919542 7JGIcombinedJ26739_1000805963 8JGIcombinedJ26739_1008006802 9Ga0070697_1002380062 10Ga0070731_100368955 11Ga0070731_102881332 12Ga0070731_103705552 13Ga0070732_109374902 14Ga0066903_1003092302 15Ga0070766_102661242 16Ga0070766_104012952 17Ga0070766_111302782 18Ga0070717_108306291 19Ga0070717_121188552 20Ga0099829_106058602 21Ga0126373_100379296 22Ga0153921_10218221 23Ga0153922_11000841 24Ga0210407_101373522 25Ga0210407_101572333 26Ga0210407_109495851 27Ga0210403_100489093 28Ga0210403_113862761 29Ga0210406_106915461 30Ga0210408_115211731 31Ga0210388_114903102 32Ga0210393_108601822 33Ga0210389_114609091 34Ga0210387_109628922 35Ga0210387_111448202 36Ga0207685_102726391 37Ga0209325_10331181 38Ga0209329_11024331 39Ga0170834_1100175011 40Ga0170834_1141170101 41Ga0170823_161806961 42Ga0170824_1054712441 43Ga0170824_1225172192 44Ga0307474_100665202 45Ga0307474_103175742 46Ga0307474_112013961 47Ga0306918_114850081 48Ga0307477_106708581 49Ga0307475_100856174 50Ga0307475_101617791 51Ga0307475_103450512 52Ga0307475_105715971 53Ga0307479_105000392 54Ga0307479_119717431 55Ga0307471_1007736852 56Ga0307472_1017377621 57Ga0335085_100696406
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72. 1Ga0307479_103972662 2JGI12712J15308_100824642 3JGI12627J18819_100220335 4JGI12627J18819_100566012 5JGI12627J18819_101272902 6JGI12627J18819_103919542 7JGIcombinedJ26739_1000805963 8Ga0070697_1002380062 9Ga0070731_100368955 10Ga0070731_102881332 11Ga0070731_103705552 12Ga0070732_109374902 13Ga0070766_104012952 14Ga0070717_108306291 15Ga0099829_106058602 16Ga0126373_100379296 17Ga0153921_10218221 18Ga0153922_10485362 19Ga0137359_104442772 20Ga0137359_112086882 21Ga0137359_112912392 22Ga0210407_101572333 23Ga0210407_102461863 24Ga0210407_109495851 25Ga0210403_105366741 26Ga0210403_113862761 27Ga0210399_101521512 28Ga0210399_101862582 29Ga0210401_100668692 30Ga0210406_101604732 31Ga0210405_100145282 32Ga0210388_114903102 33Ga0210393_108601822 34Ga0210389_114609091 35Ga0210387_109628922 36Ga0210387_112764052 37Ga0210386_115321412 38Ga0210383_114535091 39Ga0210402_114767761 40Ga0210409_115324381 41Ga0207685_102726391 42Ga0209325_10331181 43Ga0209329_11024331 44Ga0209579_100039784 45Ga0209579_100351554 46Ga0209275_107356052 47Ga0209380_100657824 48Ga0209380_108742111 49Ga0308309_113839761 50Ga0170834_1092645514 51Ga0170823_161806961 52Ga0170824_1054712441 53Ga0170824_1225172192 54Ga0310686_1139547463 55Ga0307476_101354352 56Ga0307476_108387511 57Ga0307474_100665202 58Ga0307474_103175742 59Ga0307474_104426052 60Ga0307474_106399521 61Ga0307474_112013961 62Ga0307477_101347942 63Ga0307477_106708581 64Ga0307475_103100243 65Ga0307475_105715971 66Ga0307475_108045202 67Ga0307475_112479062 68Ga0306921_110516591 69Ga0307479_100305583 70Ga0307479_100879194 71Ga0307479_105000392 72Ga0307479_105271872 73Ga0307479_106006172 74Ga0307479_112779402 75Ga0307479_119717431 76Ga0307471_1002575581 77Ga0307471_1007736852 78Ga0307471_1011537892 79Ga0307472_1000041513 80Ga0307472_1017377621 81Ga0335085_100696406
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 2.97% β-sheet: 15.84% Coil/Unstructured: 81.19%
Feature Viewer
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Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
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Pfam ID	Name	% Frequency in 158 Family Scaffolds
PF12705	PDDEXK_1	5.70
PF00005	ABC_tran	2.53
PF14534	DUF4440	1.90
PF08241	Methyltransf_11	1.90
PF13683	rve_3	1.27
PF04185	Phosphoesterase	1.27
PF00069	Pkinase	1.27
PF02954	HTH_8	1.27
PF00486	Trans_reg_C	1.27
PF13578	Methyltransf_24	1.27

COG ID	Name	Functional Category	% Frequency in 158 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	5.06
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	1.27
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	1.27
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.63
COG0677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.63
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.63
COG1004	UDP-glucose 6-dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.63
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	0.63
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.63
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	0.63

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.73 %
Unclassified	root	N/A	1.27 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.73 %
Unclassified	root	N/A	1.27 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.73 %
Unclassified	root	N/A	1.27 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	87.34 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.53 %
Unclassified	root	N/A	1.27 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.90 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.27 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.63 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.63 %
Unclassified	root	N/A	1.27 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	48.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	48.73 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.90 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	0.63 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.27 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.63 %
Unclassified	root	N/A	1.27 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	48.73 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.90 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	0.63 %
Unclassified	root	N/A	1.27 %
unclassified Burkholderiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales	1.27 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.63 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	48.73 %
Alloacidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium	1.27 %
Burkholderiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	1.27 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.63 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.63 %
Unclassified	root	N/A	1.27 %
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	0.63 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	48.73 %
Alloacidobacterium dinghuense	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	1.27 %
Burkholderiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	1.27 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.63 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.63 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.63 %
Unclassified	root	N/A	1.27 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001471\|JGI12712J15308_10082464	All Organisms → cellular organisms → Bacteria → Acidobacteria	814	Open in IMG/M
3300001867\|JGI12627J18819_10002652	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	6545	Open in IMG/M
3300001867\|JGI12627J18819_10022033	All Organisms → cellular organisms → Bacteria → Acidobacteria	2603	Open in IMG/M
3300001867\|JGI12627J18819_10056601	All Organisms → cellular organisms → Bacteria → Acidobacteria	1634	Open in IMG/M
3300001867\|JGI12627J18819_10127290	All Organisms → cellular organisms → Bacteria → Proteobacteria	1044	Open in IMG/M
3300001867\|JGI12627J18819_10391954	All Organisms → cellular organisms → Bacteria → Acidobacteria	564	Open in IMG/M
3300002245\|JGIcombinedJ26739_100080596	All Organisms → cellular organisms → Bacteria	3021	Open in IMG/M
3300002245\|JGIcombinedJ26739_100800680	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	823	Open in IMG/M
3300005536\|Ga0070697_100238006	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1554	Open in IMG/M
3300005538\|Ga0070731_10036895	All Organisms → cellular organisms → Bacteria → Acidobacteria	3287	Open in IMG/M

Showing 1 to 10 of 158 entries

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Habitat	Taxonomy	Distribution
Environmental	Environmental	96.84%
Host-Associated	Host-Associated	3.16%

Habitat	Taxonomy	Distribution
Fungi	Host-Associated → Fungi	3.16%
Terrestrial	Environmental → Terrestrial	96.84%

Habitat	Taxonomy	Distribution
Mycelium	Host-Associated → Fungi → Mycelium	3.16%
Soil	Environmental → Terrestrial → Soil	96.84%

Habitat	Taxonomy	Distribution
Loam	Environmental → Terrestrial → Soil → Loam	20.89%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	75.32%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	3.16%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.63%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.53%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	63.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	18.35%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.39%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	3.16%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	3.16%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.53%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	11.39%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	5.70%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	34.18%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.78%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	6.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.63%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.63%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	6.33%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.27%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.63%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.16%

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12712J15308_100824642	3300001471	Forest Soil	MDVTVAISAERDQIFVYVVTQQASRAYVVDLKTIGGPARLTAPAVTLQYFGAEFAIRIWVQTKSRSSWLEIIH*
JGI12627J18819_100026525	3300001867	Forest Soil	MDVTVAVDTERDQIFLYVVTQQASRAHVVDLKTIGTAALLATPAVTFQHSGAA*
JGI12627J18819_100220335	3300001867	Forest Soil	MDVIVAISAERDQIFAFVITQPASEANVMDLKTIGTPARLASPAVTLQHFDAEFAIRIWTQPNSRSPCLEITH*
JGI12627J18819_100566012	3300001867	Forest Soil	VDFCGDLLYILAHLAMDVTVAIGAERDQIFVYVVTQPASRAHVVNLETIGTAAILASPAVTLQYFGSEFAIRIWVEPKSRSPRLEISH*
JGI12627J18819_101272902	3300001867	Forest Soil	MDVTVAISAQCNQIFFYVVTEQASRAHVVDLKTIGTAAILAFPALTLQHFGAEFAIGIWVEPNSRPSRLEISQ*
JGI12627J18819_103919542	3300001867	Forest Soil	MDVAVAIGTERDQIFVCVVTQQASRAHVVNLETIGTAAVLTSPAVALQPFGAEFAIRTRVQPK
JGIcombinedJ26739_1000805963	3300002245	Forest Soil	MGITVAFSAERDQIFVSVVTQSASRANVVDLETIGTAAVLASPAVTLQHFSAEFAIRIWLQPKSRSLRLKIAH*
JGIcombinedJ26739_1008006802	3300002245	Forest Soil	MDVTVAISTEXDQIFVXVVTQPASRAHXVDLETIGSAAVLASPAITLQHFDTEFAIXIWGQPKPRSSRLEIXH*
Ga0070697_1002380062	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MDVTVAISAERDQIFVSVVTEQASRANVMNLETIGTAAVLASPSVTLQHFGAEFAIRIWVQLKLRS*
Ga0070731_100368955	3300005538	Surface Soil	MDVTVAISAQREDFRLVITQSAPRANVVDLKAIGAPTGLASPAVALQDFGAEFAIRIWV*
Ga0070731_100557984	3300005538	Surface Soil	MDVTVAISAERDQIFVFVITQPAPRPEVVNLKTVGTPARLASPSITFQHFDAEFAIRIWLQPKFRSLRLEIAH*
Ga0070731_100586842	3300005538	Surface Soil	MDVTVAIGAERDQIFVFVITQPASEANVMDLKTIGTPARLASPAVTLQHFDAEFAIRIWTQPNSRSRWLEIAH*
Ga0070731_102881332	3300005538	Surface Soil	VDVTVAVSAERDQIFVCIVTEPASRANVVDLKTIGAAAGLASPAVTFQHFSAEFAIRICAEPKSWSSRPEISH*
Ga0070731_103705552	3300005538	Surface Soil	VIHSSPQRNAASVDVTVAISAERDQIFVCVITQPAPRANVVHLKTIRTPARLASPTITLQHFGAEFAIRIWV*
Ga0070732_109374902	3300005542	Surface Soil	VDVVVAVSAERDQIFICVVTQPASRADVVNLKTNGTAAILASPAVTLQHFGAEFAIRI*
Ga0070763_105279912	3300005610	Soil	MDVAVAISAERDQIFVFVITQPASEANVMNLKTIGTPARLASPAVTLQHFDTEFAIRI*
Ga0066903_1003092302	3300005764	Tropical Forest Soil	MYIARAISAERDQIFVCVVAQSASRANVVDLKMIRAAAILASPAIPLQHIVM*
Ga0070766_102661242	3300005921	Soil	MAISAERDQVFVCVVAQLAPRANVVHLKTIGAATDLASPAVALQHFGAEFAIRIWV*
Ga0070766_104012952	3300005921	Soil	RFRIYRSPRLEAAAMDVTVAISAERDQVFVSVVTQSASRADVVHLEVIGPAVLASPSITVQHFGAQFAIGIWV*
Ga0070766_111302782	3300005921	Soil	MTTRFRIYRSPRLEAAAMDVTVAISTECDEIFVCVVTQLASRAHVVNLETIGTATILASPAVSLQHFGAEFAIRIWVQPKSRSPRLEIIH*
Ga0070717_108306291	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VDITVAISAERDQIFACVVAQQAPRANVVNLEMIGSPTILASPTITLQHFDTEFAIRIWV
Ga0070717_121188552	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VAISTKGDQVFVYIVAQTASRANMVDLETIGTAAVLASPAVTLQHFGAEFAIR
Ga0099829_106058602	3300009038	Vadose Zone Soil	VLAVRGFLLSIHRSRRLEAFSVDATVAISTERDQIFVYVVTQQASRANVVDLETIETAAVLASPAVTLQYFGAEFAIRIWVQPKSRSSWLDAVH*
Ga0126373_100379296	3300010048	Tropical Forest Soil	VDVTVAISTKSDQIFGCVVTQPAPRANVVDLKMIGATAVLASPAVTLQHFDAKFAIRIWVQPKPRSP*
Ga0153921_10218221	3300012080	Attine Ant Fungus Gardens	MNLAVAHCAERDQIFVCIVTQQASRANVMNLETIGTAAVLASPAVTLQHFGAEFAI
Ga0153922_10325641	3300012181	Attine Ant Fungus Gardens	MDVTVAISAERDQIFVCVVTQQASRAEVVNLETIGTAAVLTSPAVALQHFGAEFAIRIWVEPKS
Ga0153922_10485362	3300012181	Attine Ant Fungus Gardens	VDVAVAISTERDQIFVCVVAQQASRAHVVDLETIGTAAVLASPAIALQHFGAEFAIRIWVQPQSRSSRLETVH*
Ga0153922_11000841	3300012181	Attine Ant Fungus Gardens	MFLVDVTVAISAERDQIFVCIVTQQASRAHVVDLKTIGTAAVLASPPVTLQHFGVEFAV
Ga0137388_117379201	3300012189	Vadose Zone Soil	VLAVRGFLLSIHRSRRLVAVSVDGTVAISAERDQIFVYVVTEQASRANVVDLETIETAAVLASPAVTLQHFGAKFAIRIRVQPKSRSSWLDAVH*
Ga0153928_11036491	3300012677	Attine Ant Fungus Gardens	TVAISTERDQIFVCVVTQPASRAHVVDLETIGSAAVLASPAITLQHFDTEFAIRIWVQPEPRSSRLEITH*
Ga0137359_104442772	3300012923	Vadose Zone Soil	MNLAVAHCAKSDQIFVYVVTQQASRAEVVNLETIGTAAVLASPAVTLQHFDAEFAIRIWVQPKSRSSRLGFIH*
Ga0137359_112086882	3300012923	Vadose Zone Soil	MDVTVAIGAERDQIFVCVVTQQASRADVVDLETVGTAAILASPAVTLQHFGTEFAVRICIEPKSRSSWLKITH*
Ga0137359_112912392	3300012923	Vadose Zone Soil	FRIHRSPRLEAAAMDVAVAISTERDQILVCVVTQPAPRAEVVNLETIGSPTVLASPAVTLQHFGAEFAIRIWVKPKSRSSWLEITH*
Ga0210407_101373522	3300020579	Soil	MVSVDVSMAIGTECDQIFVSVVTQSAPRAYVVDLKTIRATTALASPTVALQHFGAEFAIR
Ga0210407_101572333	3300020579	Soil	VDAAVAISTERDQIFVCVVTQTASRADVVDLKTIGSPAILATPAVALQDFGVEFAIGIWVEPKPWSPWSKISH
Ga0210407_102461863	3300020579	Soil	MAISAERDQIFVCVVAQSAPRANVVDLKTIGTATGLASPAVALQHFGEEFAIGIRVQPNPRSP
Ga0210407_109495851	3300020579	Soil	MYVTVAISAERDQIFVSVVTQSASRANVVDLKMIRAAARLASPAVALQHFAAEFAIRIRV
Ga0210403_100489093	3300020580	Soil	MAIGTECDQIFVSVVTQSAPRANVVDLEVIGTTAILASPAVTLQHFDTEFAIRIWAQPKSWSSRFEITH
Ga0210403_105366741	3300020580	Soil	VDASAMGITVAFSAERDQIFVSVVTQSASRANVVDLETIGTAAVLASPAVTLEHFGAEFAIRIWVQPKPWSPWSKISH
Ga0210403_107252922	3300020580	Soil	VDVVVAVSAERDQIFICVVTQPASRVDVVNLKTIRATTALASPTVALQHFGAEFAIRI
Ga0210403_113862761	3300020580	Soil	VAISTKRDQIFVCVVAQPASRVYVVDLEVIGSPAVLASPSITFQHFGVEFAIRICVEPKSRS
Ga0210399_100756055	3300020581	Soil	VAISTERDQIFVCVVTQTASRADVVDLKTIGSPAILATPAVALQDFGVEFAIGIWVEPKPWSPWSKISH
Ga0210399_101521512	3300020581	Soil	MDVTVAISAERDQIFVCVVTQLAPRANVVDLKTIGAATGLASPAVAPQHFGAEFAIRIWVQPKPRSSWSKIRH
Ga0210399_101862582	3300020581	Soil	VDVVVAVSAERDQIFICVVTQSASRANVVDLKTIGAATGLASPAVALQHFGAEFVIRIWVQPKPRSPWSKISH
Ga0210401_100668692	3300020583	Soil	MGITVAISAERDQVFVNVITQPAPRANMVDLETIGTAAVLASPAVTLEHLGAEFAIRMWVQPKPRSPWSKISH
Ga0210401_106390572	3300020583	Soil	VDVVVAVSAERDQIFICVVTQPASRVDVVDLKTIGSPAILASPAVALQDFGVEFVIGIWVQPKPWSPWSKISH
Ga0210406_100544123	3300021168	Soil	VDATVAISTERDQIFVCVVTQTASRADVVDLKTIGSPAILATPAVALQDFGVEFAIGIWVEPKPWSPWSKISH
Ga0210406_101604732	3300021168	Soil	MNVTVAISAERDQVFVCVVTQSASRMYVVDLEVIGSTAVLALPAITLQHFGAKFAIRIWLQPKSRSLRLKIAHRTFPI
Ga0210406_106915461	3300021168	Soil	VAISTERDQVFVQVVTQQASRANVMDLETIGGPAVLAPPAVALQHFDTEFAIRN
Ga0210405_100145282	3300021171	Soil	VAISTERDQIFVCVITQSAPRANVVDLKTIGAATGLASPAVALQHFDAEFAIRIWLQPKSRSLRLEIAH
Ga0210405_110370642	3300021171	Soil	MDATVTVSAERDQIFVCVVTQPASRANVVDLETIGAAAILASPSVALQHFGAEFAI
Ga0210408_115211731	3300021178	Soil	GSIHHRPAAMDVTVAISAERDQIFVFVITQPAPRPEVVNLKTVGTPARLASPSITFQHFDAEFAIRIWLQLKSRSLRLEIAH
Ga0210388_114903102	3300021181	Soil	VDVTVAISAERDQIFICIVTQSASRANVVDLETIRTATVLASPAVALQHFGAEFAIRIRVQPKPRSPWSKISR
Ga0210393_108601822	3300021401	Soil	VAISTQRDQIFVCVVTPTAPRAEVVDLETIGSPARLASPAVTLQHFGTEFAIRLWVQ
Ga0210389_114609091	3300021404	Soil	VDVTVAISTERDQILVCIVTQPASRVDVVHLETIGTAAILTSPSVAPEHFGVEFAIRIWIELKSRSPWLEVLH
Ga0210387_109628922	3300021405	Soil	VAISTQRDQIFVCVVTQTASRANVVDLETIGTTAVLASPAVTLQHFGAEFAIRILVEPKSRSSRFEIGHRTSA
Ga0210387_111448202	3300021405	Soil	RLEAPATGVTVAISAERDQIFVHVVTQSASRAHVVNLEVLGTAAVLASPTITLQHFG
Ga0210387_112764052	3300021405	Soil	LEMVSVDVSMAIGTECDQIFVSVVTQSAPRAYVVDLKTIRATTALASPTVALQHFGAEFAIRI
Ga0210387_116061372	3300021405	Soil	MVSVDVSMAIGTECDQIFVSVVTQSAPRANVVDLEVIGTTAILASPAVTLQHFDTEFAIRIWAQPKSWSSRFEITH
Ga0210386_115321412	3300021406	Soil	VDVFVSVSADLDQIFFCFVTQPASRVDVVDLKTIGSPAILASPAVALQDFGVEFVIGIWVQPKPWSPWSKISH
Ga0210383_101105632	3300021407	Soil	MAIGTECDQIFVSVVTQSAPRAYVVDLKTIRATTALASPTVALQHFGAEFAIRI
Ga0210383_114535091	3300021407	Soil	ARQKSEARSPRLEMVSVDVSMAIGTECDQIFVSVVTQSAPRANVVDLEVIGTTAILASPAVTLQHFDTEFAIRIWAQPKSWSSRFEITH
Ga0210384_109376562	3300021432	Soil	MDVTVTISAERDQIFVFVITQPASEANVMDLKTIGTPARLASPAVTLQHFDAEFAIRIWTQPNSRSPWLEIAH
Ga0210392_102102022	3300021475	Soil	VAISTERDQIFVCVVTQTASRADVVDLKTIGSPAILATPAVALQDFGVEFAIGSWVEPKPWSPWSKISH
Ga0210402_103509352	3300021478	Soil	MVVTVAISAERDQIFVHVVTQSASRAHVVNLEVLGTAAVLASPTITLQHFG
Ga0210402_114767761	3300021478	Soil	VDVTVAVSTERDQIFVCIVTQPASRMDVVYLEMIGTAAILASPSVALQHFGAEFAIRILVQPKPRSPWLEIFH
Ga0210410_112944681	3300021479	Soil	VAVSTERDQIFVCIVTQPASRMDVVYLEMIGTAAILASPSVALQHFGAEFAIRI
Ga0210409_115324381	3300021559	Soil	VDVTVAISTERDQILVCIVTQPASRMDVVYLETIGIAAILASPSVALQHFGAEFAIRIWVQTKSRSSWLEIIH
Ga0126371_100583342	3300021560	Tropical Forest Soil	MYIALAISAERDQIFVCVVAQSASRANVVDLKMIRAAAILASPAIPLQHIVM
Ga0207685_102726391	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MSPMFRSIPSPPVAMDVTVAISAERDQIFVLVVTQPASEANVMDLKTIGTPARLASPTITLQHFGAEFAIGIWV
Ga0209325_10331181	3300027050	Forest Soil	MDVTLAISAKRDQIFVYVVTQPAARARVVDLKTIGTAAVLASPPVTLQYFGAEYAIRIWVQPQSPSSWLEFTQS
Ga0209729_10166472	3300027061	Forest Soil	MDVTVAISAQCNQIFFYVVTEQASRAHVVDLKTIGTAALLATPAVTFQHSGAA
Ga0209214_10634332	3300027071	Forest Soil	VSMDVTVAVDTERDQIFLYVVTQQASRAHVVDLKTIGTAALLATPAVTFQHSGAA
Ga0209214_10638762	3300027071	Forest Soil	MDVIVAISAERDQIFAFVITQPASEANVMDLKTIGTPARLASPAVTLQHFDAEFAIRIWTQPNSRSPCLEITH
Ga0209418_10065591	3300027371	Forest Soil	MDVAVAIGTERDQIFVCVVTQQASRAHVVDLETIGTAAILASPAVTLQHFGAE
Ga0209622_10131991	3300027502	Forest Soil	LHRPAAMDVIVAISAERDQIFAFVITQPASEANVMDLKTIGTPARLASPAVTLQHFDAEFAIRIWTQPNSRSPCLEITH
Ga0209329_11024331	3300027605	Forest Soil	VAISAECDQILAYVTTQSASRVNMVDLKTIGTRARLASPTITLQHFGAEFAIRICV
Ga0209625_10118512	3300027635	Forest Soil	MDVTVAISTERDQIFVCVVTQPASRAHVVDLETIGSAAVLASPAITLQHFDTEFAIRIWGQPKPRSSRLEITH
Ga0209579_100039784	3300027869	Surface Soil	MDVSVAISAERDQIFVFVITQSPPRANVVDLETIGTATVLASPAVALQYFGVEFAIRIRVQPEPRSPWPKISH
Ga0209579_100351554	3300027869	Surface Soil	MDVTVAISAERDQIFVFVITQPAPRPEVVNLKTVGTPARLASPSITFQHFDAEFAIRIWLQPKFRSLRLEIAH
Ga0209579_102741971	3300027869	Surface Soil	MDVTVAIGAERDQIFVFVITQPASEANVMDLKTIGTPARLASPAVTLQHFDAEFAIRIWTQP
Ga0209579_104163251	3300027869	Surface Soil	VDVTVAVSAERDQIFVCIVTEPASRANVVDLKTIGAAAGLASPAVTFQHFSAEFAIRICAEPKSWSSRPEISH
Ga0209275_107356052	3300027884	Soil	MDVTVAISAERDQIFVFVITQPASEANVMDLKTIGTPARLASPAVTLQHFDTEFAIRNWIQPKSRPPWLEIAH
Ga0209380_100657824	3300027889	Soil	MDVTVAISTECDEIFVCVVTQLASRAHVVNLETIGTATILASPAVSLQHFGAEFAIRIWVQPKSRSPQLEITH
Ga0209380_108742111	3300027889	Soil	MDVIVAISAERDQIFVFVITQPASEANVMNLKTIGTPARLASPAVTLQHFDTEFAIRIRVQPNPRSPWSKISH
Ga0209006_100748762	3300027908	Forest Soil	MDVTVAISAERDQIFVYVVTQQASRAYVVDLKTIGGPARLTAPAVTLQYFGAEFAIRIWVQTKSRSSWLEIIH
Ga0209526_100360595	3300028047	Forest Soil	MGITVAFSAERDQIFVSVVTQSASRANVVDLETIGTAAVLASPAVTLQHFSAEFAIRIWLQPKSRSLRLKIAH
Ga0308309_100140163	3300028906	Soil	MYVTVAISAERDQIFVSVVTQSASRANVVDLKMIRAAARLASPAVALQDFGVEFAIRIRV
Ga0308309_111586192	3300028906	Soil	VIHGSPQRNAASVDVTVAISAERDQIFVCVITQPAPRANVVHLKTIRTPARLASPTITLQHFGAEFAIRIWV
Ga0308309_113839761	3300028906	Soil	MAISAERDQVFVCVVAQLAPRANVVHLKTIGAATDLASPAVALQHFGAEFAIRIWV
Ga0170834_1031048752	3300031057	Forest Soil	MDVTVAIGAERDQIFVCVVTQQASRAHVVDLETIGTAAILASPAVTLQHFGAEFAIRIWI
Ga0170834_1092645514	3300031057	Forest Soil	MDVTVAISAERDKIFVCVITQPTPRANVVDLKTIGAATGLASPAVALQHFGAEFGIRIWVQPKPRSPWLKISH
Ga0170834_1100175011	3300031057	Forest Soil	MGTTVAIGAECDQIFVFVITQPASEANVMDLKTIGTPARLASPAVTLQHFDTEFAIRI
Ga0170834_1141170101	3300031057	Forest Soil	MDVTVATGTERDQIFVRVVAQPASRANMVDLKTIRAAAVLTSPA
Ga0170823_161806961	3300031128	Forest Soil	TLKTKFRIYRSPRLEAASVDVAVAISAERDQIFGCVAAQPAPRANVVDLETIGTAAVLASPSITFQYFDAKFAIRICVEPKSRSSRLEIIH
Ga0170824_1054712441	3300031231	Forest Soil	VDATVAISTQRDQIFVSVVTQPASRVDVVDLETIGTAAVLASPAIAFQHSVAEFAIRT
Ga0170824_1089211931	3300031231	Forest Soil	MFLVDVTVAISAERDQIFVCIVTQQASRAHVVDLKTIGTAAVLASPPVPLQHFCAEFAIGIWVEP
Ga0170824_1225172192	3300031231	Forest Soil	VFLRLPQLETISVDVAVAISAERDQVFVSVVTQSASRANVVDLEVIRSPTVLASPAVTLQHFGAEFAIRIWVEPQPWSLQLAIAH
Ga0170818_1122861001	3300031474	Forest Soil	MFLVDVTVAISAERDQIFVFVITQPASEANVMDLKTIGTPARLASPSVTLQHFDTEFAIR
Ga0310686_1139547463	3300031708	Soil	MDVTVAISAERDQIFVSVVTQSASRANVVDLETSGTAAALASPAVTLEHFGAELAIRICVEPKSRSPQLEITH
Ga0307476_101354352	3300031715	Hardwood Forest Soil	MFLVDVTVAISAERDQIFVCIVTEQASRAHVVDLETIGTAAVLAVPAVTLQHVGAEFAIGIWGQPKSRSLRLEITH
Ga0307476_108387511	3300031715	Hardwood Forest Soil	MDVTVAISAERDQIFVCVVTQQASRAEVVNLETIGTAAVLTSPAVALQHFGAEFAIRIWVEPKSRSSRLEAIH
Ga0307474_100665202	3300031718	Hardwood Forest Soil	VAISAERDQIFFYVITQQASRAHVVDLETIGIAALLASPAVTLQHFDAEFAISSWIQPKSRSSWLEFTH
Ga0307474_102527712	3300031718	Hardwood Forest Soil	MDVTVAISTERDQIFVCVVTQPASRAHVVDLETIGSAAVLASPAITLQHFDTEFAIRIWVQPKPRSSLLEITH
Ga0307474_103175742	3300031718	Hardwood Forest Soil	VDNSVSFVLPQLESAAMDLSVAVSAEGDQIFVCVVTQQASRAHVVDLETIGTPAVLTSPTVTLQHFGAEFAIRIWVEPKSRSSRLEAIH
Ga0307474_104426052	3300031718	Hardwood Forest Soil	MDVIVAISAECDQIFAYIVTQHASRTNVVDLKTIGTAAVLASPAVALQHFGAEFAIRIWVEPKSRSPWLELIH
Ga0307474_106399521	3300031718	Hardwood Forest Soil	MDVTVAISAERDQIFVCVVTQQASRVHVVDLKTIGTAAILASPAVTLQHFGAEFAIRIWIQPKPRSPQLKIAQ
Ga0307474_112013961	3300031718	Hardwood Forest Soil	VDVVVAVSAERDQIFICVVTQPASRVDVVNLKTIRATTALASPTVALQHFGAEFAIRIWVQLKSRSSGLEIVH
Ga0307469_101319032	3300031720	Hardwood Forest Soil	MDVSVAISTERDQIFFNVVTQQASRAHVVDLKTIGTAALLATPAVTFQHSGAA
Ga0306918_114850081	3300031744	Soil	VCVVTQSAPRANVVDLKTIGAATGLASPAVALQHFDAEFAIRIWVQLKPRSP
Ga0307477_101347942	3300031753	Hardwood Forest Soil	MDVTVAIGAERNQVFVCVITQSAPRANVVNLKTIGTAAVLASPSVTLEHFGAEFAIRIWIQPKSRSSRLGISH
Ga0307477_106708581	3300031753	Hardwood Forest Soil	SLRSPRLEMFLVDVTVAISAERDQIFVCIVTQQASRAHVVDLKTIGTAAVLASPAVTLQHFDAEFAISIWVEPKSRSPRMEITH
Ga0307475_100149234	3300031754	Hardwood Forest Soil	MDVTVAISAERDQIVVCVVTQQASRVHVVDLKTIGTAAIPASPAVTLQHFGAEFAIRIWIQPKPRSPQLEIAQ
Ga0307475_100856174	3300031754	Hardwood Forest Soil	MDATVTVSAERDQIFVCVVTQPASRANVVDLETIGTAAILASPSVALQHFG
Ga0307475_101617791	3300031754	Hardwood Forest Soil	ERDQIFVCVVTQPASRANVVDLETIGTAAILASPSVALQHFGAEFAIRIWVQTKSRSSWLEITH
Ga0307475_102953302	3300031754	Hardwood Forest Soil	MQFCTHRSHRLEAVSMDVAVAISAERDQIFVCVVTQQASRAHVVDLETIGTAAVLASPAVTLQHFGAEFAISIWVQPKSRSSRL
Ga0307475_103100243	3300031754	Hardwood Forest Soil	VGVIVAISAERDQIFVYVVTQPASRAHVVDLKTIGTAAVLASPAVTLQHFDAEFAIGIFVEPKPRSSRLEITH
Ga0307475_103450512	3300031754	Hardwood Forest Soil	VVEYPLSSWLEAVSVDVTVAISAERDQVFLCVITQQASRAHVVNLETIGTAAVLASPAVT
Ga0307475_103651151	3300031754	Hardwood Forest Soil	MDVTVAISAERDQIFVCVVTQQASRANVVGLKTVGTAAVLASPAVTFQHFD
Ga0307475_105715971	3300031754	Hardwood Forest Soil	MDITVAIGAERDQIFVCIVTQQASRANVMNLETIGTAAILASPAVALQYFGSEFAIRIWVEPKSRSPWLELIH
Ga0307475_107058481	3300031754	Hardwood Forest Soil	MFLVDVTVAISAERDQIFVCIVTQQASRAHVVDFETIGTAAVLASPAV
Ga0307475_108045202	3300031754	Hardwood Forest Soil	MDVTVAISTERDQIFVCIVTQQASRALVVDLEAISTAAVLASPAVALQHFGAEFAIRIWVEPKPRSPWLEISH
Ga0307475_110428572	3300031754	Hardwood Forest Soil	SLRSPRLEMFLVDVTVAISAERDQIFVCIVTEQASRAHVVDLETIGTAAVLAVPAVTLQHVGAEFAIGIWGQPKSRSLRLEITH
Ga0307475_112479062	3300031754	Hardwood Forest Soil	MDVTVAISTERDQIFVYVVTQQASRANVVNLETIGTAAVLASPSITFQHFGAEFAIRIWVEPKSRSPRLETTH
Ga0307475_113291482	3300031754	Hardwood Forest Soil	MDVTVAISAERDQIFVFVITQPASEANVMDLEAIGTPARLASPAVTLQHFDTEFAIRIWTQPNSGSPWLEIAH
Ga0307475_114428501	3300031754	Hardwood Forest Soil	MAISAERDQIFVSVVTEQASRANVMNLETIGTAAVLASPAVTLQHFGAEFAIRILAEPQSRSSRLEIAH
Ga0318546_105199141	3300031771	Soil	EMYIALAISAERDQIFVCVVAQSASRANVVDLKMIRAAAILASPAIPLQHIVM
Ga0307473_100698913	3300031820	Hardwood Forest Soil	MDVTVAVDTERDQIFLYVVTQQASRAHVVDLKTIGTAALLATPAVTFQHSGAA
Ga0307478_105054301	3300031823	Hardwood Forest Soil	MDVAVAISAERDQIFVCVVTQQASRAHVVDLETIGTAAVLASPAVTLQHF
Ga0306921_110516591	3300031912	Soil	MDVAVAISAKRDQILVCVVTQSASRPNVVNLKTIRAATGLASPAVALQHFGAECAIRIRV
Ga0307479_100305583	3300031962	Hardwood Forest Soil	MDATVTVSAERDQIFVCVVTQPASRANVVDLETIGTAAILASPSVALQHFGEEFAIRIWVQTKSRSSWLEITH
Ga0307479_100879194	3300031962	Hardwood Forest Soil	MDVALAISTERDQIFVGVVTQPASRAHVVNLETIGTAAVLASPAITRQHFCAEFAIRI
Ga0307479_101442821	3300031962	Hardwood Forest Soil	MDVTVAISAERDQIFVCVVTQQASRVHVVDLKTIGTAAILASPAVTLQHFGAEFAIRIWIQPKPRSPQLEIAQ
Ga0307479_101896692	3300031962	Hardwood Forest Soil	VDVAVAISTERDQIFVCVVAQQASRAHVVDLETIGTAAVLASPAIALQHFGAEFAIRIWVQPQSRSSRLETVH
Ga0307479_103184362	3300031962	Hardwood Forest Soil	VAISAERDQIFFYVITQQASRAHVVDLETIGIAALLASPAVTLQHFDAEFAISSWIQTKSRSSWSEFTH
Ga0307479_103972662	3300031962	Hardwood Forest Soil	MDVTVAISAERDQIFVCVVTQQASRANVVDLETIGTAAVLASPAVTLQHFGAEFAIRIWVQPKSRSSRLEITN
Ga0307479_105000392	3300031962	Hardwood Forest Soil	MDVTVAISAERDQIFVSVVTQPAPRAHVVDLEMIGTAAALASPAVTLQHFGVEFAISAATPSSHFFQSP
Ga0307479_105271872	3300031962	Hardwood Forest Soil	MFLVDVTVAISAERDQIFVSVVTEQASRAHVVDLETIGTAAILASPAVTLQHFGAEFAIRILAEPQSRSSRLEIAH
Ga0307479_106006172	3300031962	Hardwood Forest Soil	MDVTVAIGAERDQIFACVVTQPAPRAHVVDLKTIGTAAVLASPAVTFQHFGAEFAIRIWAKPKSRSPWLEITH
Ga0307479_107809492	3300031962	Hardwood Forest Soil	MDVTVAISTERDQIFVYVVTQQASRANVVNLETIGTAAVLASPSITFQHFGAEFAIRIWVEPKSRSPWLEISH
Ga0307479_108059293	3300031962	Hardwood Forest Soil	TVAISAERDQIFVSVVTQQASRAHVMDLETIGTAAVLASPAVTLQHFGAEFAIRIWVQPKSRSSRLEITH
Ga0307479_109835411	3300031962	Hardwood Forest Soil	MDVSVAISAERDQIFVCIVTQQASRAHVVDLETIGTAAVLASPAVTLQHFGAEFAIGIWVQPKSRSLRLEITH
Ga0307479_112600252	3300031962	Hardwood Forest Soil	DSSLSLRSPRLEMFLVDVTVAISAERDQIFVCIVTEQASRAHVVDLETIGTAAVLAVPAVTLQHVGAEFAIGIWGQPKSRSLRLEITH
Ga0307479_112779402	3300031962	Hardwood Forest Soil	VGVIVAISTERDQIFVCVVTQPASRANVVHLETIGTAAVLASPAVTLQHFGVEFAIRIWVQPKSRS
Ga0307479_113728772	3300031962	Hardwood Forest Soil	MDVTVAISAERDQIFVCVVTQQALRAHVVDLETIGTAAVLASPAVTLQHFGVEFAIRIWVQPKPRSSRLEITH
Ga0307479_119717431	3300031962	Hardwood Forest Soil	MDVTVAISTERDHIFVDIVAQQASGAHMVDLETIGAATVLASPAVTLQHFGAEFAIRIWVQPKSRSPWLEITH
Ga0307471_1000970274	3300032180	Hardwood Forest Soil	VDFCGDLLYILAHLAMDVTVAIGAERDQIFVYVVTQPASRAHVVNLETIGTAAILASPAVALQYFGSEFAIRIWVEPKSRSPWLEISH
Ga0307471_1002575581	3300032180	Hardwood Forest Soil	MDVTVAISAERDQIFLFVITQPAPRAEVVDLKIIGAPAILASPPVTLQHFGAEFAIRIRV
Ga0307471_1007736852	3300032180	Hardwood Forest Soil	MVDPGVAISAERDQIFVCVVTEQASRAEVVNLETIGTAAVLASPAVTFQHFGVEFAISSWVQPKPRSSRLEITH
Ga0307471_1011537892	3300032180	Hardwood Forest Soil	ERYQIFICVVTQSASRANVVDLKTIGSPAILASPSVALQDFGVEFAIGIWVQPKPWSPWSKISH
Ga0307471_1012788052	3300032180	Hardwood Forest Soil	MDVAVAISTERDQIFVGVVTQPASRAHVVNLETIGTAAVLASPAITRQHFCAEFAIRI
Ga0307471_1020830581	3300032180	Hardwood Forest Soil	VDVTVAINAERDQIFVCVVTQQASRAHVVDLETIGTAAILAAPAVTLQHFGAELAIRI
Ga0307471_1023110442	3300032180	Hardwood Forest Soil	MDVTVAISTERDQIFVCIVTQQASRALVVDLEAISTAAALASPAVALQHFGAEFAIRIWVEPKPRSPWLEISH
Ga0307472_1000041513	3300032205	Hardwood Forest Soil	MDVTVAISAKRDQIFVYVVTKLASRAHVVNLETIGTAAVLASPAVALQHFGAQFAIRIWVQPKSRSSRLEIGH
Ga0307472_1006791482	3300032205	Hardwood Forest Soil	MDVTVAISAERDQIFVCVVTQPASRAHVVDLKTIGTAAVLASPAVTLQHFDAEFAIGIFVEPKSRSSRLEITH
Ga0307472_1016835131	3300032205	Hardwood Forest Soil	MFLVDVTVAISAERDQIFVCIVTQQASRAHVVDLKTIGTAAVLASPPVTLQHFGVEFAIRIWVQPKSRSPWLEITH
Ga0307472_1017377621	3300032205	Hardwood Forest Soil	DHLTTREGRIRVRHFPIPRSPRLEASSMDVTVAISTERDQIFVCVVTQPASRAHVVDLETIGSAAVLASPAITLQHFDTEFAIRIWGQPKPRSSRLEITH
Ga0335085_100696406	3300032770	Soil	MSTLFWIYRSPGAAMDVTVAISAERNQIFVCIVTQPTPRANVVDLEMLRTAAILASPAIAPEHFGAELTVRICVEPKSRSSRLEIVH

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F042616

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences