Metagenome / Metatranscriptome Family F042604

Basic Information
Family ID	F042604
Family Type	Metagenome / Metatranscriptome
Number of Sequences	158
Average Sequence Length	50 residues
Representative Sequence	MNKSSREKEAVLNVFAALVRPLMRVAFEYGISAGEIAGVVRRSYIQAL
Number of Associated Samples	140
Number of Associated Scaffolds	158

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	27.22 %
% of genes near scaffold ends (potentially truncated)	98.73 %
% of genes from short scaffolds (< 2000 bps)	89.24 %
Associated GOLD sequencing projects	132
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.60

Most Common Taxonomy
Group	Bacteria (91.139 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (23.418 % of family members)
Environment Ontology (ENVO)	Unclassified (21.519 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.835 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.32% β-sheet: 0.00% Coil/Unstructured: 48.68%
Feature Viewer

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Pfam ID	Name	% Frequency in 158 Family Scaffolds
PF13286	HD_assoc	75.95
PF01761	DHQ_synthase	4.43
PF01202	SKI	1.27
PF11104	PilM_2	0.63
PF00263	Secretin	0.63

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.14 %
Unclassified	root	N/A	8.86 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.14 %
Unclassified	root	N/A	8.86 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.14 %
Unclassified	root	N/A	8.86 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	67.72 %
Unclassified	root	N/A	8.86 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.63 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	65.82 %
Unclassified	root	N/A	8.86 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	0.63 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.63 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	8.86 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	3.16 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	1.90 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	1.27 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.63 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.63 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	8.86 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3.16 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	1.90 %
Ectothiorhodospiraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae	0.63 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.63 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.63 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	8.86 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3.16 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	1.90 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.63 %
Ectothiorhodospiraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae	0.63 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.63 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	8.86 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3.16 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1.90 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.63 %
Ectothiorhodospiraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae	0.63 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.63 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.63 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918008\|ConsensusfromContig362600	Not Available	617	Open in IMG/M
2189573004\|GZGWRS402IVMOT	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	522	Open in IMG/M
3300000955\|JGI1027J12803_107905733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	691	Open in IMG/M
3300001661\|JGI12053J15887_10280736	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300001867\|JGI12627J18819_10404143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	556	Open in IMG/M
3300005166\|Ga0066674_10490215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	555	Open in IMG/M
3300005180\|Ga0066685_10125829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1729	Open in IMG/M
3300005327\|Ga0070658_11932103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	510	Open in IMG/M
3300005330\|Ga0070690_100063080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2391	Open in IMG/M
3300005367\|Ga0070667_101994943	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	547	Open in IMG/M
3300005435\|Ga0070714_100548074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1107	Open in IMG/M
3300005544\|Ga0070686_100097290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1981	Open in IMG/M
3300005558\|Ga0066698_10348934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1023	Open in IMG/M
3300005564\|Ga0070664_102393992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	501	Open in IMG/M
3300005568\|Ga0066703_10371497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	858	Open in IMG/M
3300005569\|Ga0066705_10981319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	501	Open in IMG/M
3300005586\|Ga0066691_10530093	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300005614\|Ga0068856_101220987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	768	Open in IMG/M
3300005712\|Ga0070764_10202758	Not Available	1113	Open in IMG/M
3300005844\|Ga0068862_101382401	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	707	Open in IMG/M
3300005921\|Ga0070766_11200025	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300005983\|Ga0081540_1284567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	570	Open in IMG/M
3300006031\|Ga0066651_10327324	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	822	Open in IMG/M
3300006102\|Ga0075015_100921358	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300006163\|Ga0070715_10087828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1424	Open in IMG/M
3300006172\|Ga0075018_10515925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	625	Open in IMG/M
3300006175\|Ga0070712_101728442	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300006176\|Ga0070765_100487485	Not Available	1157	Open in IMG/M
3300006354\|Ga0075021_10927259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	566	Open in IMG/M
3300006358\|Ga0068871_100156341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1947	Open in IMG/M
3300006854\|Ga0075425_102072577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	635	Open in IMG/M
3300006954\|Ga0079219_12263849	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300009093\|Ga0105240_12053885	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	594	Open in IMG/M
3300009098\|Ga0105245_11966876	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300009098\|Ga0105245_12276978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	595	Open in IMG/M
3300009143\|Ga0099792_10774723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	626	Open in IMG/M
3300009177\|Ga0105248_13103679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	529	Open in IMG/M
3300009545\|Ga0105237_11246731	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300009545\|Ga0105237_12132314	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	570	Open in IMG/M
3300009551\|Ga0105238_11384977	Not Available	730	Open in IMG/M
3300009551\|Ga0105238_11669072	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300009551\|Ga0105238_12311572	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300010048\|Ga0126373_10599784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1154	Open in IMG/M
3300010048\|Ga0126373_11054199	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	879	Open in IMG/M
3300010048\|Ga0126373_12873154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	537	Open in IMG/M
3300010325\|Ga0134064_10174922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	756	Open in IMG/M
3300010358\|Ga0126370_10965927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	775	Open in IMG/M
3300010358\|Ga0126370_12121012	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300010361\|Ga0126378_10522865	Not Available	1302	Open in IMG/M
3300010361\|Ga0126378_11954740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	668	Open in IMG/M
3300010364\|Ga0134066_10319626	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	564	Open in IMG/M
3300010375\|Ga0105239_10779142	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1095	Open in IMG/M
3300010375\|Ga0105239_11035452	All Organisms → cellular organisms → Bacteria	944	Open in IMG/M
3300010376\|Ga0126381_100674839	Not Available	1476	Open in IMG/M
3300010376\|Ga0126381_104471298	Not Available	540	Open in IMG/M
3300010396\|Ga0134126_10655879	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1196	Open in IMG/M
3300010398\|Ga0126383_12666376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	583	Open in IMG/M
3300012202\|Ga0137363_11366889	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300012349\|Ga0137387_10150010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1659	Open in IMG/M
3300012951\|Ga0164300_10612197	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	645	Open in IMG/M
3300012971\|Ga0126369_10964139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	940	Open in IMG/M
3300014168\|Ga0181534_10868303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	537	Open in IMG/M
3300014969\|Ga0157376_12911613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	518	Open in IMG/M
3300015372\|Ga0132256_100555003	Not Available	1261	Open in IMG/M
3300016387\|Ga0182040_11310493	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300016387\|Ga0182040_11448777	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300016422\|Ga0182039_10091760	All Organisms → cellular organisms → Bacteria	2216	Open in IMG/M
3300017822\|Ga0187802_10142621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	913	Open in IMG/M
3300017936\|Ga0187821_10419073	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	551	Open in IMG/M
3300017959\|Ga0187779_10231117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1166	Open in IMG/M
3300017959\|Ga0187779_10766343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	656	Open in IMG/M
3300017961\|Ga0187778_10731120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	671	Open in IMG/M
3300017970\|Ga0187783_10741533	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300017973\|Ga0187780_10463049	Not Available	903	Open in IMG/M
3300017975\|Ga0187782_10617478	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	833	Open in IMG/M
3300017994\|Ga0187822_10134865	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	782	Open in IMG/M
3300018034\|Ga0187863_10070764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae	1971	Open in IMG/M
3300019866\|Ga0193756_1045270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	608	Open in IMG/M
3300020580\|Ga0210403_11201049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	584	Open in IMG/M
3300020581\|Ga0210399_10699807	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	833	Open in IMG/M
3300020582\|Ga0210395_10282867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1247	Open in IMG/M
3300020583\|Ga0210401_10102966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	2682	Open in IMG/M
3300021171\|Ga0210405_10008617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	8812	Open in IMG/M
3300021180\|Ga0210396_11450415	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300021372\|Ga0213877_10158146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	719	Open in IMG/M
3300021403\|Ga0210397_10083641	All Organisms → cellular organisms → Bacteria → Proteobacteria	2121	Open in IMG/M
3300021404\|Ga0210389_10925600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	678	Open in IMG/M
3300021406\|Ga0210386_10939768	All Organisms → cellular organisms → Bacteria	739	Open in IMG/M
3300021407\|Ga0210383_10461286	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1097	Open in IMG/M
3300021420\|Ga0210394_10236028	Not Available	1599	Open in IMG/M
3300021432\|Ga0210384_10294483	Not Available	1461	Open in IMG/M
3300021432\|Ga0210384_10300701	All Organisms → cellular organisms → Bacteria	1444	Open in IMG/M
3300021433\|Ga0210391_10005741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	10212	Open in IMG/M
3300021477\|Ga0210398_10595280	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	898	Open in IMG/M
3300021478\|Ga0210402_10438144	Not Available	1214	Open in IMG/M
3300021560\|Ga0126371_10180696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2194	Open in IMG/M
3300021560\|Ga0126371_13154962	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300021953\|Ga0213880_10166460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	608	Open in IMG/M
3300022721\|Ga0242666_1121771	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	619	Open in IMG/M
3300022873\|Ga0224550_1020027	All Organisms → cellular organisms → Bacteria	945	Open in IMG/M
3300022897\|Ga0247764_1211928	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	589	Open in IMG/M
3300022910\|Ga0247768_1212908	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300025505\|Ga0207929_1044648	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300025664\|Ga0208849_1026555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1883	Open in IMG/M
3300025915\|Ga0207693_10951174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	657	Open in IMG/M
3300025915\|Ga0207693_11383149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	523	Open in IMG/M
3300025921\|Ga0207652_10512066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1080	Open in IMG/M
3300025924\|Ga0207694_10439328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1088	Open in IMG/M
3300025928\|Ga0207700_10980723	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300025929\|Ga0207664_10373830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1264	Open in IMG/M
3300025941\|Ga0207711_10691327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	951	Open in IMG/M
3300025945\|Ga0207679_10422605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1177	Open in IMG/M
3300025949\|Ga0207667_10148997	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2409	Open in IMG/M
3300026333\|Ga0209158_1232979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	633	Open in IMG/M
3300026959\|Ga0207852_1029513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	561	Open in IMG/M
3300027738\|Ga0208989_10064073	Not Available	1264	Open in IMG/M
3300027869\|Ga0209579_10353168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	795	Open in IMG/M
3300027879\|Ga0209169_10333603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	797	Open in IMG/M
3300027894\|Ga0209068_10296281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	907	Open in IMG/M
3300028047\|Ga0209526_10926567	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300028747\|Ga0302219_10010241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3516	Open in IMG/M
3300029951\|Ga0311371_11376888	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300030677\|Ga0302317_10023748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3299	Open in IMG/M
3300030740\|Ga0265460_12806181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	523	Open in IMG/M
3300031507\|Ga0307509_10616731	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	756	Open in IMG/M
3300031545\|Ga0318541_10716876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	558	Open in IMG/M
3300031640\|Ga0318555_10650947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	570	Open in IMG/M
3300031680\|Ga0318574_10749898	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300031682\|Ga0318560_10645382	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300031715\|Ga0307476_11353006	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300031718\|Ga0307474_10041089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	3408	Open in IMG/M
3300031720\|Ga0307469_10028463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3198	Open in IMG/M
3300031724\|Ga0318500_10026227	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2290	Open in IMG/M
3300031744\|Ga0306918_10100520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2058	Open in IMG/M
3300031748\|Ga0318492_10290893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	849	Open in IMG/M
3300031753\|Ga0307477_10991961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	551	Open in IMG/M
3300031754\|Ga0307475_10744668	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300031764\|Ga0318535_10270457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	761	Open in IMG/M
3300031768\|Ga0318509_10245483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1000	Open in IMG/M
3300031779\|Ga0318566_10655054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	510	Open in IMG/M
3300031795\|Ga0318557_10192637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	930	Open in IMG/M
3300031859\|Ga0318527_10198935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	848	Open in IMG/M
3300031902\|Ga0302322_103699186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	523	Open in IMG/M
3300031910\|Ga0306923_11073337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	869	Open in IMG/M
3300031910\|Ga0306923_11717678	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	648	Open in IMG/M
3300031959\|Ga0318530_10048056	All Organisms → cellular organisms → Bacteria	1597	Open in IMG/M
3300032008\|Ga0318562_10668864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	598	Open in IMG/M
3300032009\|Ga0318563_10540748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	629	Open in IMG/M
3300032009\|Ga0318563_10808655	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300032025\|Ga0318507_10361257	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300032039\|Ga0318559_10280285	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	773	Open in IMG/M
3300032065\|Ga0318513_10036119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2159	Open in IMG/M
3300032091\|Ga0318577_10240752	All Organisms → cellular organisms → Bacteria	866	Open in IMG/M
3300032205\|Ga0307472_102135384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	564	Open in IMG/M
3300032770\|Ga0335085_11443598	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	719	Open in IMG/M
3300032805\|Ga0335078_10030854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	7964	Open in IMG/M
3300032805\|Ga0335078_12371686	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300032828\|Ga0335080_10096669	Not Available	3276	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.54%
Host-Associated	Host-Associated	16.46%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.85%
Plants	Host-Associated → Plants	16.46%
Aquatic	Environmental → Aquatic	5.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.66%
Freshwater	Environmental → Aquatic → Freshwater	3.16%
Peat	Environmental → Terrestrial → Peat	3.16%
Sediment	Environmental → Aquatic → Sediment	2.53%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.53%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.27%
Roots	Host-Associated → Plants → Roots	1.27%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	54.43%
Loam	Environmental → Terrestrial → Soil → Loam	12.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.49%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.33%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.16%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.16%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.16%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.53%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.53%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.27%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.63%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.63%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	31.01%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.49%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.33%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.70%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.16%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.16%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.53%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.53%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.90%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.90%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.27%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.27%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.63%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.63%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.63%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.42%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	5.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.80%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.80%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.16%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.53%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.53%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.53%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.53%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.90%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.90%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.27%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.27%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.27%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.27%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.27%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	1.27%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.27%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.27%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.27%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.63%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.63%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.63%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.63%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.63%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.63%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.63%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.63%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.63%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.63%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.63%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.63%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	0.63%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.63%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.63%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918008	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog_all	Environmental	Open in IMG/M
2189573004	Grass soil microbial communities from Rothamsted Park, UK - FG2 (Nitrogen)	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300019866	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1m1	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021372	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R01	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300021953	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R07	Environmental	Open in IMG/M
3300022721	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022873	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 10-14	Environmental	Open in IMG/M
3300022897	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L051-202B-4	Environmental	Open in IMG/M
3300022910	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L016-104C-6	Environmental	Open in IMG/M
3300025505	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025664	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026959	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 3 (SPAdes)	Environmental	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030677	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_3	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300031507	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM	Host-Associated	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Bog_all_C_03873080	2140918008	Soil	MSHLGIDNVNKTGKEAVLDVFAGLLRSLMPVAFEYGISAGEAHGVVRRSYIE
FG2_03521430	2189573004	Grass Soil	MNKSAREKEAVLNVFASLVRPLTRVAFEYGISASEISGAVRRTYIQALEE
JGI1027J12803_1079057332	3300000955	Soil	VGGSPKEAVLNVFSALIRPLMRVAFEYGITASEISGVVRRTYIEALEARLKQQH
JGI12053J15887_102807362	3300001661	Forest Soil	MNKTSKEKEAVLNVFAALVRPLMRVAFEYGISAGEIAGVVRRAYIQALEAR
JGI12627J18819_104041432	3300001867	Forest Soil	MNKATREKEAVLNVFAGLVQPLMRVAFEYGISAGEIAGVVRRVYIQALEARLLDQKRPTT
Ga0066674_104902152	3300005166	Soil	MNKSTREKEAVLSVFAELVRPLMRVAFEYGISASEIAGVVRRTFIQALESRLLEQKRATT
Ga0066685_101258293	3300005180	Soil	MNKSTREKEAVLSVFAELVRPLMRVAFEYGISASEIAGVVRRTFIQALESRLLEQKRA
Ga0070658_119321032	3300005327	Corn Rhizosphere	MNKSPREKEAVLNVFARLVRPLMRVAFEYGISAGEIAGVSRRAYIEALEARLKEQKRPTT
Ga0070690_1000630801	3300005330	Switchgrass Rhizosphere	MNKSAREKEAVLNVFASLVRPLTRVAFEYGISASEISGAVRRTYIQALEARLLDQKRATTDARLA
Ga0070667_1019949432	3300005367	Switchgrass Rhizosphere	MSKTSKEKEAVLDVFARLIRPLMRAAFEYGISAGEISGVVRRTY
Ga0070714_1005480742	3300005435	Agricultural Soil	MNKTSKEKEAVLNVFAGLVRPLMRVAFEYGISAGEIAGVARRVYIQ
Ga0070686_1000972901	3300005544	Switchgrass Rhizosphere	MNKTSKEKEAVLNVFAALVRPLMRVAFEYGISAGEIAGVVRRAYIQALEARL
Ga0066698_103489341	3300005558	Soil	MNKSAREKEAVLSVFSELVRPLMRVAFEYGISAGEIAGVVRRTYIQALEARL
Ga0070664_1023939921	3300005564	Corn Rhizosphere	VLNVFGGLFGPLMRVAFEYGITAGEIAGVVRRAYIQALEARLKEQRRPT
Ga0066703_103714971	3300005568	Soil	MNKTSKEKEAVLNVFAALVRPLMRVAFEYGISAGEIAGVARRAYIQALEARLQEQKRPTTDAR*
Ga0066705_109813192	3300005569	Soil	MNKSSREKEAVLSVFAELVRPLMRVAFEYGISASEIAGVVRRTYIQSLEARLSDQKRATT
Ga0066691_105300931	3300005586	Soil	MNKTSKEKEAVLNVFAALVRPLMRVAFEYGISAGEIAGVVRRA
Ga0068856_1012209871	3300005614	Corn Rhizosphere	MSSSSKEKEAILNVFAGLIRPLMRVAFEYGISANEIARVLRRTYVQALEARLTEQKLP
Ga0070764_102027581	3300005712	Soil	MNKSAREKEAVLNMFASLVRPLTRLAFEYGISASELSGAMRRTYIQALETRLLDQKRTT
Ga0068862_1013824011	3300005844	Switchgrass Rhizosphere	VAGSEKEAILNVFAALVRPLMRAAFEYGITASEIAGVIRRVYIQSLE
Ga0070766_112000251	3300005921	Soil	MSQQSNCNMTKTGREKEAVLSVFAALVQPLMRVAFEYGISAGEI
Ga0081540_12845671	3300005983	Tabebuia Heterophylla Rhizosphere	MNKTSKEKEAVLNVFAALVRPLMRVAFEYGISAGEIAGVVRRSYIQALEARLTEQSRPT
Ga0066651_103273241	3300006031	Soil	MNKSSREKEAVLSVFAELVRPLMRVAFEYGISASE
Ga0075015_1009213581	3300006102	Watersheds	MNNATSEKEAVLNVFAGLIRPLMRVAFEYGISASEASSAVRRTYIQA
Ga0070715_100878282	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MNKSAREKEAVLNVFASLVRPLTRVAFEYGISASEIAGAVRRTYIQALEARLVDQKRPPTDTRLA
Ga0075018_105159251	3300006172	Watersheds	MNKSAREKEAVLNVFASLVRPLTRVAFEYGISASEISGAVRR
Ga0070712_1017284421	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MNKSAREKEAVLNVFASLVRPLTRVAFEYGISASEIAG
Ga0070765_1004874852	3300006176	Soil	MNKSAREKEAVLNVFASLVRPLTRVAFEYGISASEISGVVRRTYI
Ga0075021_109272593	3300006354	Watersheds	MNKTSKEKEAVLNVFAALVRPLMRVAFEYGISAGEIAGVVRRSYIQALEARLQE
Ga0068871_1001563413	3300006358	Miscanthus Rhizosphere	MNKSSKEKEAVLNVFAGLVRPLMRVAFEYGISAGEIAGVVRRSYIQSLES
Ga0075425_1020725771	3300006854	Populus Rhizosphere	VSGSEKEALLNVFAALVRPLMRAAFEYGITASEIAGVIRRVYIQALEARL
Ga0079219_122638492	3300006954	Agricultural Soil	MNKSAREKEAVLSVFAALVQPLMRVAFEYGISAGEIAGVVRRTY
Ga0105240_120538851	3300009093	Corn Rhizosphere	MNKTSKEKEAVLDVFASMVRPLMRVAFEFGISAGEIAGVVRRVYIQALEA
Ga0105245_119668761	3300009098	Miscanthus Rhizosphere	MSKTSKEKEAVLDVFARLIRPLMRAAFEYGISAGEIS
Ga0105245_122769781	3300009098	Miscanthus Rhizosphere	MNKTSQEKEAVLNVFAGLVRPLMRVAFEYGISAGEIAGVVRRSYI
Ga0099792_107747232	3300009143	Vadose Zone Soil	MNKSVREKEAVLSVFAELVRPLMRVAFEYGISAGEIAGVVRRTYIQALEARLSDQKRST
Ga0105248_131036791	3300009177	Switchgrass Rhizosphere	MSKTSKEKEAVLDVFARLIKPLMRAAFEYGISAGEISGVV
Ga0105237_112467312	3300009545	Corn Rhizosphere	MSKTSKEKEAVLDVFARLIRPLMRAAFEYGISAGEISGVVR
Ga0105237_121323142	3300009545	Corn Rhizosphere	MNKTTKEKEAVLNVFGGLFGPLMRVAFEYGITAGEIAGVVRRAYIQALEARLKEQKRPTTDARL
Ga0105238_113849772	3300009551	Corn Rhizosphere	MNKTAKEKESVLNIFAALIRPLTRIAFEYGITAGEISGVLRRVYIQ
Ga0105238_116690722	3300009551	Corn Rhizosphere	MNKTPREKEAVLNVFARLVRPLMRVAFEFGISAGEIAGVVRRAYIQALEARLQEQKRPT
Ga0105238_123115721	3300009551	Corn Rhizosphere	MNKTSKEKEAVLNVFAGLVRPLMRVAFGYGISAGEIAGVVRRSYIESLESRLQ
Ga0126373_105997841	3300010048	Tropical Forest Soil	MNKSAGQKEAVLNVFAAVMRPLMRIAFEHGISASEIAGAVRRTYIQALEARLAEQK
Ga0126373_110541991	3300010048	Tropical Forest Soil	MSQQRSRSMTKTSREKEAVLSVFAALVQPLMRVAFEYGISAGEIA
Ga0126373_128731542	3300010048	Tropical Forest Soil	MNKSAREKEAVLSVFAALMRPLMRLAFEYGISASEIASAVRRTYVQALEARLAE
Ga0134064_101749222	3300010325	Grasslands Soil	MNKSSREKEAVLSVFAELVRPLMRVAFEYGISASEIAGVVRRTYI
Ga0126370_109659272	3300010358	Tropical Forest Soil	MNKSAREKEAVLNVFASLVRPLTRVAFEYGISASEIAGVVRRTYIQALESRLLDQKRATT
Ga0126370_121210122	3300010358	Tropical Forest Soil	MNKSAREKEAVLSVFAALVRPLMRVAFEYGISAGEIAGVVRRTYI
Ga0126378_105228651	3300010361	Tropical Forest Soil	MNKSAREKEAVLSVFAALMRPLMRLAFEYGISASEIASAVRR
Ga0126378_119547402	3300010361	Tropical Forest Soil	VNKSLREKEAVLNVFAALMRPLMRIAFQYGISASEIAGVVRRTYINALEARLAEQKRPAS
Ga0134066_103196261	3300010364	Grasslands Soil	MNKSSREKEAVLSVFAELVRPLMRVAFEYGISASEIAGVVR
Ga0105239_107791422	3300010375	Corn Rhizosphere	MNKSPREKEAVLNVFARLVRPLMRVAFEYGISAGEIAGVVR
Ga0105239_110354522	3300010375	Corn Rhizosphere	MSKTSKEKEAVLDVFARLIRPLMRAAFEYGISAGEISGVVRRTYIQALEARLLDQK
Ga0126381_1006748392	3300010376	Tropical Forest Soil	VNKSGREKEAVLNVFAALMRPLMRVAFEYGISASEIAAVVRRTYIQALEARFLDQQR
Ga0126381_1044712981	3300010376	Tropical Forest Soil	MTKTGKEKEAVLNVFAALMRPLTRVAFEYGITAGEIAGTVRRVYIEALEARL
Ga0134126_106558791	3300010396	Terrestrial Soil	MKKTSKEKEAVLNVFAALIRPLMRVAFEYGISASEIAGTVRRTYVQALEAKLLEQKRPPT
Ga0126383_126663762	3300010398	Tropical Forest Soil	MSQQSHGNMTKTSREKEAVLSVFAALVQPLMRVAFEYGISAGEIAGVVRRVYIQAL
Ga0137363_113668892	3300012202	Vadose Zone Soil	MNKSAREKEAVLSVFAELVRPLMRVAFEYGISASEIAGVVRRTYIQSLEARLA
Ga0137387_101500101	3300012349	Vadose Zone Soil	NLELCHNSVAGDMNKSTREKEAVLSVFAELVRPLMRVAFEYGISASEIAGVVRRTFI*
Ga0164300_106121972	3300012951	Soil	MNKSAREKEAVLNVFASLVRPLTRVAFEYGISASEISGA
Ga0126369_109641391	3300012971	Tropical Forest Soil	MNKSAREKEAMLNVFASLVRPLTRVAFEYGISASEIAGVVRRTYIQALEARLMDQKRATT
Ga0181534_108683031	3300014168	Bog	MNKSAREKEAVLSVFASLVRPLTRVAFEYGISASEISGAVRRTYIQALEARLMEQQR
Ga0157376_129116131	3300014969	Miscanthus Rhizosphere	MSKTSKEREAVLDVFARLIRPLMRAAFEYGISAGEI
Ga0132256_1005550031	3300015372	Arabidopsis Rhizosphere	MNKSIREKEAVLNVFAALMRPLMRIAFEYGISASEIAGVVRRTYIQALE
Ga0182040_113104932	3300016387	Soil	MNESAREKEAVLSVFAALMRPLMRIAFEYGISASEIAGA
Ga0182040_114487771	3300016387	Soil	MSQESTATMDKSIREKEAVLNVFAGLVRPLMRVAFEYGISASEIAAV
Ga0182039_100917601	3300016422	Soil	MNKSVREKEAVLNVFATLVRPLMRVAFDYGISASEIAGVVRRTYIQ
Ga0187802_101426212	3300017822	Freshwater Sediment	MNKSIREKEAVLTVFAASVRPLMRVAFEYGISASEIAAVVR
Ga0187821_104190731	3300017936	Freshwater Sediment	MNKTIKEKEAVLNVFAALMRPLMRVAFEYGISASEISGVVRRCFIQALEARLLEQKRATTDARL
Ga0187779_102311172	3300017959	Tropical Peatland	MNKSAREKEAVLSAFAALVKPLMRVAFEYGISASEIAAVVRRTYIQGLEARLLEQKRPTTDARLAL
Ga0187779_107663431	3300017959	Tropical Peatland	MNKTSREKEAVLSVFAALVQPLMRVAFEYGISAGEIAGVVRRVYIQALEARLV
Ga0187778_107311201	3300017961	Tropical Peatland	MDAAGGSTREKDAVLGVFAALLRPLMRLAFEYGISAKEISDAARRA
Ga0187783_107415332	3300017970	Tropical Peatland	VNKSVREKEAVLKVFAGLVRPLMRVAFEYGISASEIAGVVRRTYIQALEARL
Ga0187780_104630492	3300017973	Tropical Peatland	MNKSNGREKEAVLGVFAALIRPLMRVAFEYGISASEISAAVRRTFIQALEA
Ga0187782_106174781	3300017975	Tropical Peatland	MTKTSREKEAVLNVFAALVQPLMRVAFEYGISAGEIAGVVRRVYIQALEARL
Ga0187822_101348652	3300017994	Freshwater Sediment	MTKTTREKEAVLSVFAGLVQPLMRVAFEYGISAGEIAGVVRR
Ga0187863_100707643	3300018034	Peatland	MNKSAREKEAVLNVFASLVRPLTRVAFEYGISASEIS
Ga0193756_10452701	3300019866	Soil	MNKSVREKEAVLSVFAELVRPLMRVAFEYGISAGEIAGVVRRTYIQALEARL
Ga0210403_112010491	3300020580	Soil	MNKTSKEKEAVLNVFAGLVRPLMRVAFEYGITAGEIAGVVRRGYIQALEARLQERKRPTT
Ga0210399_106998072	3300020581	Soil	MNKSAREKEAVLSVFAELVRPLMRVAFEYGISAGEIAGVVRRTYIEALEA
Ga0210395_102828671	3300020582	Soil	MSKTTREKEAVLSVFAGLVQPLMRVAFEYGISAGEIAGVVRRVYIQALEARLL
Ga0210401_101029661	3300020583	Soil	MSKTTREKEAVLSVFAGLVQPLMRVAFEYGISAGEIAGVVRRVYIQALEARLLDQKRPTTDARL
Ga0210405_100086171	3300021171	Soil	MNKSVREKEAVLNVFAALMRPLMRIAFEYGISASEIAGVVRRTYIQALEARLAEQKRPASDARL
Ga0210396_114504151	3300021180	Soil	MTKTSREKEAVLSVFAALVQPLMRVAFEYGISAGEIAGVVRCVYIQA
Ga0213877_101581461	3300021372	Bulk Soil	MSKTSREKEAVLSVFAALVQPLMRVAFEYGISAGEIAGVVRRVYIQALEA
Ga0210397_100836413	3300021403	Soil	MNKSSREKEAVLSVFAELVRPLMRVAFEYGISASEIAGVVRR
Ga0210389_109256002	3300021404	Soil	MNKSARQKEAVLNVFASLVRPLTRVAFEYGISASEISGAVRRTYIQALEARLQEQKR
Ga0210386_109397681	3300021406	Soil	MNKSVREKEAVLNVFAALMRPLMRIAFEYGISASEIAGVVRRTYIQALEARLAEQ
Ga0210383_104612862	3300021407	Soil	MNKSAREKEAVLSVFAALVRPLMRVAFEYGISASEIAGVVRRTYIQALEARLLE
Ga0210394_102360281	3300021420	Soil	MTKTGREKEAVLSVFAALVQPLMRVAFEYGISAGEIA
Ga0210384_102944832	3300021432	Soil	MNKTTREKEAVLSVFAGLVQPLMRVAFEYGISAGEIAGVV
Ga0210384_103007012	3300021432	Soil	MNKSVREKEAVLSVFAELVRPLMRVAFEYGISAGEIAGVVRRT
Ga0210391_100057411	3300021433	Soil	MNKSAGEKEAVLSVFAAMVRPLMRVAFEYGISASEIAGVVRRTYIQALEARLLEQKRAA
Ga0210398_105952801	3300021477	Soil	MNKTSKEKEAVLNVFAALIRPLMRVAFEYGITAGEIAGVVRRSYIEALEGRLQEQKRPT
Ga0210402_104381442	3300021478	Soil	MSQQSHQGSMNKSSREKEAVLSVFAELVRPLMRVAFEYGISASEIAGVVRRTYIQA
Ga0126371_101806963	3300021560	Tropical Forest Soil	VNKSLREKEAVLNVFAALMRPLMRIAFQYGISASEIAGVVRRTYINALEARLIEQ
Ga0126371_131549621	3300021560	Tropical Forest Soil	MNKSAREKEAVLSVFAALVKPLMRVAFEYGISAGEIAGAVRRTYIQALEARLL
Ga0213880_101664601	3300021953	Exposed Rock	MNKSVREKEAVLNVFAALMRPLMRFAFEYGISASEIAGV
Ga0242666_11217711	3300022721	Soil	KEAVLNVFASLVRPLTRVAFEYGISASEISGAVRRTYIQALEARLQEQ
Ga0224550_10200272	3300022873	Soil	MKKTEKEAVLDVFAGLLRSLMPVAFEYGISAGEASGAVRRSYIEALEARLREQGR
Ga0247764_12119282	3300022897	Plant Litter	MSGSEKEAVLNVFAALVRPLMRAAFEYGITAGEIAGVIRRVYIQ
Ga0247768_12129082	3300022910	Plant Litter	MNKTDKEKEAVLNVFAALVRPLMRVAFEYGISAGEIA
Ga0207929_10446482	3300025505	Arctic Peat Soil	MSHAGIDNVNKTGKEAVLDVFAGLLRSLMPVAFEYGISAGEASG
Ga0208849_10265553	3300025664	Arctic Peat Soil	MSHLGIDNVNKTGKEAVLDVFAALLRSLMPVAFEYGISAGEASGAVRRSYIETLEGRLKE
Ga0207693_109511741	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MNKSAREKEAVLNVFASLVRPLTRVAFEYGISASEIAGAV
Ga0207693_113831491	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MNKSIREKEAVLNVFAALMRPLMRIAFEYGISASEIAGVVRRTYIQALEARLAE
Ga0207652_105120661	3300025921	Corn Rhizosphere	MNKTGREKEAVLNVFAGLVRPLMRVAFEYGISAGEIAGVVRRAYIQALESKLQEQKRP
Ga0207694_104393281	3300025924	Corn Rhizosphere	MSKTSKEKEAVLDVFARLIKPLMRAAFEYGISAGEISGVVRRTYIQALE
Ga0207700_109807232	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MNKSIREKEAVLNVFAALMRPLMRIAFEYGISASEIAGVVRRTYIQALEARLAEQKRPASDARLAVVA
Ga0207664_103738301	3300025929	Agricultural Soil	MNKTSKEKEAVLNVFAGLVRPLMRLAFEYGISAGEIAGVARRVYIQALEARLLEQKRPTTDA
Ga0207711_106913271	3300025941	Switchgrass Rhizosphere	MNKTNEEKEAVLNVFAALMRPLMRIAFEYGISAGEIAGVVRRVYIHALEARL
Ga0207679_104226051	3300025945	Corn Rhizosphere	MKMNKTSEEKEAVLGVFAALVRPLMRLAFEYGITAGEISGVIRRVYIKALEDRLTEQ
Ga0207667_101489971	3300025949	Corn Rhizosphere	MNKSPREKEAVLNVFARLVRPLMRVAFEYGISAGEIAGVSRRAYI
Ga0209158_12329792	3300026333	Soil	MNKTSKEKEAVLNVFAALVRPLMRVAFEYGISAGEIAGVVRRAYIQA
Ga0207852_10295131	3300026959	Tropical Forest Soil	MTKTSREKEAVLSVFAALVQPLMRVAFEYGISAGEIAGVVRRVYIQSLEARLRDQKR
Ga0208989_100640732	3300027738	Forest Soil	MNKTSKEKEAVLNVFAALVRPLMRVAFEYGISAGEIAGVVRR
Ga0209579_103531682	3300027869	Surface Soil	MNKSAREKEAVLSVFADLVRPLMRVAFEYGISASEIA
Ga0209169_103336032	3300027879	Soil	MSQQSNCNMTKTGREKEAVLSVFAALVQPLMRVAFEYGISAGEIAGVVRRVYIQS
Ga0209068_102962813	3300027894	Watersheds	MNKTSKEKEAVLNVFAALVRPLMRVAFEYGISAGEIAGVVRRSYIQALEARLQEQS
Ga0209526_109265671	3300028047	Forest Soil	MNKSVREKEAVLSVFAELVRPLMRVAFEYGISAGEIAGVVRRTYIQAQEARLS
Ga0302219_100102411	3300028747	Palsa	VNKTEKEAVLDVFAGLLRSLMPVAFEYGISAGEASG
Ga0311371_113768881	3300029951	Palsa	VNKTEKEAVLDVFAGLLRSLMPIAFEYGISAGEASGAVRRSYIEALEARLREQNRP
Ga0302317_100237484	3300030677	Palsa	MNKSAREKEAVLNVFASLVRPLTRVAFEYGISASEISGVVRRTYIQALEARLADQKR
Ga0265460_128061812	3300030740	Soil	NKTEKEAVLDVFAGLLRSLMPVAFEYGISAGEASGLSGEVISRL
Ga0307509_106167311	3300031507	Ectomycorrhiza	MNKSSREKEAVLNVFAALVRPLMRVAFEYGISAGEIAGVVRRSYIQAL
Ga0318541_107168761	3300031545	Soil	MNKSVREKEAVLNVFATLVRPLMRVAFDYGISASEI
Ga0318555_106509471	3300031640	Soil	MNKSAREKEAVLSVFAALVKPLMRVAFEYGISASEIAGAV
Ga0318574_107498982	3300031680	Soil	MNKSVREKEAVLSVFAALMRPLMRIAFEYGVSASEIAAVVRRTYIEALEARLVEQ
Ga0318560_106453821	3300031682	Soil	MNKSAREKEAVLSVFAALMRPLMRIAFEYGISASEIAGAVRRTYIQALEARLVEQK
Ga0307476_113530061	3300031715	Hardwood Forest Soil	MNKSAREKEAVLSVFAALVKPLMRVAFEYGISASEIA
Ga0307474_100410891	3300031718	Hardwood Forest Soil	MNKSAREKEAVLAVFAGLVRPLMRVAFEYGISASEIAAV
Ga0307469_100284634	3300031720	Hardwood Forest Soil	MNKSVREKEAVLNVFAALMRPLMRIAFEYGISASE
Ga0318500_100262271	3300031724	Soil	MNKSAGQKEAVLNVFAAVMRPLMRIAFEHGISASEIAGAVRGTYI
Ga0306918_101005203	3300031744	Soil	MNESAREKEAVLSVFAALMRPLMRIAFEYGISASEIAGAVR
Ga0318492_102908932	3300031748	Soil	MNKSAREKEAVLSVFAALVKPLMRVAFEYGISASEIAGAVRRTYIHALENRLLEQRRP
Ga0307477_109919611	3300031753	Hardwood Forest Soil	MSKAAGEKEAVLSVFAALVRPLMRVAFEYGISAGEIA
Ga0307475_107446682	3300031754	Hardwood Forest Soil	MTKASREKEAVLSVFAALVQPLMRVAFEYGISAGEIAGVVRRVYIQALEARLLEQKRP
Ga0318535_102704571	3300031764	Soil	VNKSLREKEAVLNVFAALMRPLMRIAFQYGISASEVAGV
Ga0318509_102454832	3300031768	Soil	MNKSVREKEAVLNVFATLVRPLMRVAFDYGISASEIAGVVRRTYIQALE
Ga0318566_106550542	3300031779	Soil	MNKSAREKEAVLSVFAALVKPLMRVAFEYGISASEIAGAVRRTYIHALENRLLEQ
Ga0318557_101926372	3300031795	Soil	MNKSAREKEAVLSVFAALVKPLMRVAFEYGISASEIAGAVR
Ga0318527_101989351	3300031859	Soil	MNKSVREKEAVLNVFATLVRPLMRVAFDYGISASE
Ga0302322_1036991861	3300031902	Fen	MDKSSAEKEALLNVFAAFVRPLTRVAFDYGITAGEIAGVVRRVYIEALEARLKEQNRPTT
Ga0306923_110733371	3300031910	Soil	MNKSAREKEAVLSVFAALVKPLMRVAFEYGISASEIAGAVRRTYIHALENRLLE
Ga0306923_117176781	3300031910	Soil	MNKSVRQKEAVLNVFAALMRPLMRIAFEHGISASEIAGAVRGTYIQALEARLAEQK
Ga0318530_100480561	3300031959	Soil	MNKSVREKEAVLNVFATLVRPLMRVAFDYGISASEIAGVVRRTYI
Ga0318562_106688642	3300032008	Soil	MNKSAREKEAVVSAFATLMRPLMRLAFEYGVSASELAGAVRRTYIQALEARLTEQRRPASDARLAVV
Ga0318563_105407482	3300032009	Soil	MNKSAREKEAVLSVFAALMRPLMRIAFEYGISASEIAGAVRRTYIQ
Ga0318563_108086552	3300032009	Soil	MNKSAREKEAVLSVFAALVKPLMRVAFEYGISAGEIASVVRRTYIQALEA
Ga0318507_103612571	3300032025	Soil	MNESAREKEAVLAVFAGLVRPLMRVAFEYGISASEIAAVVRRAYI
Ga0318559_102802851	3300032039	Soil	MNKSAREKEAVVSAFATLMRPLMRLAFEYGVSASELAGAVRRTYIQALEARLT
Ga0318513_100361193	3300032065	Soil	MNKSAGQKEAVLNVFAAVMRPLMRIAFEHGISASEIAGAVRGTYIQALEAQLAEQKRPATDARLAV
Ga0318577_102407521	3300032091	Soil	MNESAREKEAVLSVFAALMRPLMRIAFEYGISAGEIAGAVRRTY
Ga0307472_1021353842	3300032205	Hardwood Forest Soil	MNKSIREKEAVLNVFAALMRPLMQIAFEYGISTSEIAGVVRR
Ga0335085_114435981	3300032770	Soil	MNKTSKEKEAVLNVFAALIRPLMRVAFEYGISASEIAGAV
Ga0335078_100308549	3300032805	Soil	MNKTSKEKEAVLNVFAALIRPLMRVAFEYGISASEIAGAVRRTYVQALEAKLLEQKRPPTDARLA
Ga0335078_123716862	3300032805	Soil	MNKSAREKEAVLTVFAGLVQPLMRVAFEYGISASEIAGVVRRTYIQ
Ga0335080_100966694	3300032828	Soil	MDVGGVSTREKEAVLSVFAALMRPLMPLAFEYGVSAKEITDSTRRAYIQALEARLRGQNRPATDA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.60
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.60
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F042604

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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