Metagenome / Metatranscriptome Family F042600

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F042600
Family Type	Metagenome / Metatranscriptome
Number of Sequences	158
Average Sequence Length	71 residues
Representative Sequence	MSIYELDISWATTASERRRLQWQLIASDEVSGVFLTARDDVLAVLFSGDRKGFEALARTLAPETLETAQ
Number of Associated Samples	116
Number of Associated Scaffolds	158

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	26.58 %
% of genes from short scaffolds (< 2000 bps)	78.48 %
Associated GOLD sequencing projects	107
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.76

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (98.734 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (23.418 % of family members)
Environment Ontology (ENVO)	Unclassified (39.241 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (48.101 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 31.96% β-sheet: 18.56% Coil/Unstructured: 49.48%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.76
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.76
Powered by PDBe Molstar

SCOP family	SCOP domain	Representative PDB	TM-score
d.280.1.1: Sulfolobus fructose-1,6-bisphosphatase-like	d3t2ca_	3t2c	0.71936
d.58.17.1: HMA, heavy metal-associated domain	d1kqka_	1kqk	0.70864
d.58.17.0: automated matches	d1yjra1	1yjr	0.70658
d.58.17.0: automated matches	d2rsqa_	2rsq	0.70294
d.58.17.0: automated matches	d3dxsx_	3dxs	0.69982

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 158 Family Scaffolds
PF00355	Rieske	52.53
PF01569	PAP2	4.43
PF04264	YceI	4.43
PF03176	MMPL	1.90
PF07568	HisKA_2	1.27
PF03640	Lipoprotein_15	1.27
PF03861	ANTAR	0.63
PF00117	GATase	0.63
PF01663	Phosphodiest	0.63

COG ID	Name	Functional Category	% Frequency in 158 Family Scaffolds
COG2353	Polyisoprenoid-binding periplasmic protein YceI	General function prediction only [R]	4.43
COG1033	Predicted exporter protein, RND superfamily	General function prediction only [R]	1.90
COG2409	Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily	General function prediction only [R]	1.90
COG3920	Two-component sensor histidine kinase, HisKA and HATPase domains	Signal transduction mechanisms [T]	1.27
COG4315	Predicted lipoprotein with conserved Yx(FWY)xxD motif (function unknown)	Function unknown [S]	1.27
COG3707	Two-component response regulator, AmiR/NasT family, consists of REC and RNA-binding antiterminator (ANTAR) domains	Transcription [K]	0.63

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.73 %
Unclassified	root	N/A	1.27 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.73 %
Unclassified	root	N/A	1.27 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.73 %
Unclassified	root	N/A	1.27 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	62.03 %
Unclassified	root	N/A	1.27 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.63 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	61.39 %
Unclassified	root	N/A	1.27 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.63 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	13.92 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	3.80 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	1.27 %
Unclassified	root	N/A	1.27 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.63 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	13.29 %
Gaiellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales	1.27 %
Unclassified	root	N/A	1.27 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.63 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.63 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	13.29 %
Gaiellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae	1.27 %
Unclassified	root	N/A	1.27 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.63 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.63 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	13.29 %
Gaiella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella	1.27 %
Unclassified	root	N/A	1.27 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.63 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.63 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	13.29 %
Gaiella occulta	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	1.27 %
Unclassified	root	N/A	1.27 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.63 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.63 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2035918004\|FACENC_F56XM5W01DGDC7	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	512	Open in IMG/M
3300000956\|JGI10216J12902_102879463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1098	Open in IMG/M
3300001536\|A1565W1_11094444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	826	Open in IMG/M
3300004114\|Ga0062593_100305924	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1358	Open in IMG/M
3300004157\|Ga0062590_103017977	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300004479\|Ga0062595_102589760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	508	Open in IMG/M
3300004479\|Ga0062595_102689238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	501	Open in IMG/M
3300005174\|Ga0066680_10726779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	606	Open in IMG/M
3300005178\|Ga0066688_10849378	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	567	Open in IMG/M
3300005181\|Ga0066678_11040147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	529	Open in IMG/M
3300005329\|Ga0070683_101964028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	562	Open in IMG/M
3300005356\|Ga0070674_100531721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	984	Open in IMG/M
3300005435\|Ga0070714_101210866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	737	Open in IMG/M
3300005436\|Ga0070713_102329849	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	518	Open in IMG/M
3300005439\|Ga0070711_102046308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	504	Open in IMG/M
3300005440\|Ga0070705_100345735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1083	Open in IMG/M
3300005445\|Ga0070708_100146226	All Organisms → cellular organisms → Bacteria	2196	Open in IMG/M
3300005445\|Ga0070708_100204022	All Organisms → cellular organisms → Bacteria	1852	Open in IMG/M
3300005445\|Ga0070708_100705128	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	950	Open in IMG/M
3300005445\|Ga0070708_100706417	All Organisms → cellular organisms → Bacteria	949	Open in IMG/M
3300005445\|Ga0070708_101340905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	668	Open in IMG/M
3300005467\|Ga0070706_100018012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	6515	Open in IMG/M
3300005467\|Ga0070706_101280933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	672	Open in IMG/M
3300005471\|Ga0070698_100009263	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10563	Open in IMG/M
3300005471\|Ga0070698_100011375	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9446	Open in IMG/M
3300005471\|Ga0070698_100186069	All Organisms → cellular organisms → Bacteria	2015	Open in IMG/M
3300005518\|Ga0070699_100009985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	8218	Open in IMG/M
3300005518\|Ga0070699_100061846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	3244	Open in IMG/M
3300005518\|Ga0070699_101025411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	757	Open in IMG/M
3300005526\|Ga0073909_10038093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1687	Open in IMG/M
3300005536\|Ga0070697_100107471	All Organisms → cellular organisms → Bacteria	2322	Open in IMG/M
3300005536\|Ga0070697_100335155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1305	Open in IMG/M
3300005536\|Ga0070697_101218958	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300005552\|Ga0066701_10096154	All Organisms → cellular organisms → Bacteria	1723	Open in IMG/M
3300005568\|Ga0066703_10197002	All Organisms → cellular organisms → Bacteria	1221	Open in IMG/M
3300005615\|Ga0070702_100191101	All Organisms → cellular organisms → Bacteria	1347	Open in IMG/M
3300005843\|Ga0068860_101638772	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300006049\|Ga0075417_10019419	All Organisms → cellular organisms → Bacteria	2688	Open in IMG/M
3300006163\|Ga0070715_10287243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	875	Open in IMG/M
3300006163\|Ga0070715_10323836	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300006173\|Ga0070716_100136814	All Organisms → cellular organisms → Bacteria	1557	Open in IMG/M
3300006173\|Ga0070716_100191241	All Organisms → cellular organisms → Bacteria	1352	Open in IMG/M
3300006173\|Ga0070716_100268083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1172	Open in IMG/M
3300006175\|Ga0070712_101848771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	529	Open in IMG/M
3300006579\|Ga0074054_12063814	Not Available	513	Open in IMG/M
3300006797\|Ga0066659_11261424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	616	Open in IMG/M
3300006871\|Ga0075434_102110884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	568	Open in IMG/M
3300006904\|Ga0075424_100846110	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
3300006953\|Ga0074063_11759382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	608	Open in IMG/M
3300009012\|Ga0066710_101365024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1099	Open in IMG/M
3300009038\|Ga0099829_10024204	All Organisms → cellular organisms → Bacteria	4229	Open in IMG/M
3300009038\|Ga0099829_10278313	All Organisms → cellular organisms → Bacteria	1369	Open in IMG/M
3300009038\|Ga0099829_10364284	All Organisms → cellular organisms → Bacteria	1192	Open in IMG/M
3300009038\|Ga0099829_11431534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	571	Open in IMG/M
3300009088\|Ga0099830_10415314	All Organisms → cellular organisms → Bacteria	1089	Open in IMG/M
3300009090\|Ga0099827_11885613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	521	Open in IMG/M
3300009137\|Ga0066709_100508975	All Organisms → cellular organisms → Bacteria	1697	Open in IMG/M
3300009162\|Ga0075423_10030715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	5434	Open in IMG/M
3300010373\|Ga0134128_10202709	All Organisms → cellular organisms → Bacteria	2233	Open in IMG/M
3300010396\|Ga0134126_10153726	All Organisms → cellular organisms → Bacteria	2786	Open in IMG/M
3300010400\|Ga0134122_10150128	All Organisms → cellular organisms → Bacteria	1894	Open in IMG/M
3300010400\|Ga0134122_10155888	All Organisms → cellular organisms → Bacteria	1860	Open in IMG/M
3300010401\|Ga0134121_10228784	All Organisms → cellular organisms → Bacteria	1619	Open in IMG/M
3300010403\|Ga0134123_11829401	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300011000\|Ga0138513_100053821	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	612	Open in IMG/M
3300011269\|Ga0137392_11183666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	622	Open in IMG/M
3300012198\|Ga0137364_10062431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2523	Open in IMG/M
3300012200\|Ga0137382_10048243	All Organisms → cellular organisms → Bacteria	2648	Open in IMG/M
3300012200\|Ga0137382_10055151	All Organisms → cellular organisms → Bacteria	2496	Open in IMG/M
3300012200\|Ga0137382_10473750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	888	Open in IMG/M
3300012201\|Ga0137365_10548301	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	849	Open in IMG/M
3300012208\|Ga0137376_10089793	All Organisms → cellular organisms → Bacteria	2590	Open in IMG/M
3300012208\|Ga0137376_10150176	All Organisms → cellular organisms → Bacteria	2004	Open in IMG/M
3300012208\|Ga0137376_11261441	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300012210\|Ga0137378_10704173	All Organisms → cellular organisms → Bacteria	921	Open in IMG/M
3300012211\|Ga0137377_10388841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1333	Open in IMG/M
3300012211\|Ga0137377_10578589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1060	Open in IMG/M
3300012356\|Ga0137371_10609407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	838	Open in IMG/M
3300012357\|Ga0137384_11129306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	627	Open in IMG/M
3300012361\|Ga0137360_10448536	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300012923\|Ga0137359_11371042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	595	Open in IMG/M
3300012930\|Ga0137407_11379346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	670	Open in IMG/M
3300012941\|Ga0162652_100024044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	873	Open in IMG/M
3300012951\|Ga0164300_10138019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1126	Open in IMG/M
3300012955\|Ga0164298_10312921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	978	Open in IMG/M
3300012957\|Ga0164303_11260700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	544	Open in IMG/M
3300012958\|Ga0164299_10305116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	980	Open in IMG/M
3300012960\|Ga0164301_10326053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1045	Open in IMG/M
3300012960\|Ga0164301_11477818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	559	Open in IMG/M
3300012960\|Ga0164301_11887533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	504	Open in IMG/M
3300012987\|Ga0164307_10023199	All Organisms → cellular organisms → Bacteria	3246	Open in IMG/M
3300012988\|Ga0164306_10896028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	722	Open in IMG/M
3300012989\|Ga0164305_11485101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	600	Open in IMG/M
3300012989\|Ga0164305_11485693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	600	Open in IMG/M
3300013102\|Ga0157371_10429995	All Organisms → cellular organisms → Bacteria → Terrabacteria group	969	Open in IMG/M
3300015371\|Ga0132258_10361943	All Organisms → cellular organisms → Bacteria	3591	Open in IMG/M
3300015374\|Ga0132255_102125536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	856	Open in IMG/M
3300018027\|Ga0184605_10000264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	15401	Open in IMG/M
3300018027\|Ga0184605_10085105	All Organisms → cellular organisms → Bacteria	1383	Open in IMG/M
3300018054\|Ga0184621_10000356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	10053	Open in IMG/M
3300018054\|Ga0184621_10142315	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300018061\|Ga0184619_10044127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1924	Open in IMG/M
3300018061\|Ga0184619_10093371	All Organisms → cellular organisms → Bacteria	1346	Open in IMG/M
3300018071\|Ga0184618_10025096	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1997	Open in IMG/M
3300019255\|Ga0184643_1433324	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	517	Open in IMG/M
3300019875\|Ga0193701_1097635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	549	Open in IMG/M
3300019886\|Ga0193727_1042666	All Organisms → cellular organisms → Bacteria → Acidobacteria	1496	Open in IMG/M
3300019890\|Ga0193728_1133706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1110	Open in IMG/M
3300019996\|Ga0193693_1014679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1522	Open in IMG/M
3300020000\|Ga0193692_1023071	All Organisms → cellular organisms → Bacteria	1480	Open in IMG/M
3300020002\|Ga0193730_1004839	All Organisms → cellular organisms → Bacteria	3718	Open in IMG/M
3300020002\|Ga0193730_1085581	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	888	Open in IMG/M
3300020059\|Ga0193745_1043659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	984	Open in IMG/M
3300021080\|Ga0210382_10086890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1287	Open in IMG/M
3300021080\|Ga0210382_10224305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	819	Open in IMG/M
3300021344\|Ga0193719_10012051	All Organisms → cellular organisms → Bacteria	3636	Open in IMG/M
3300021344\|Ga0193719_10276641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	707	Open in IMG/M
3300025905\|Ga0207685_10080835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1344	Open in IMG/M
3300025905\|Ga0207685_10120943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1149	Open in IMG/M
3300025906\|Ga0207699_10090411	All Organisms → cellular organisms → Bacteria	1921	Open in IMG/M
3300025910\|Ga0207684_10040835	All Organisms → cellular organisms → Bacteria	3933	Open in IMG/M
3300025910\|Ga0207684_10347899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1276	Open in IMG/M
3300025910\|Ga0207684_10519942	All Organisms → cellular organisms → Bacteria	1019	Open in IMG/M
3300025910\|Ga0207684_10680777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	875	Open in IMG/M
3300025915\|Ga0207693_11186954	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	576	Open in IMG/M
3300025922\|Ga0207646_10233613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1661	Open in IMG/M
3300025939\|Ga0207665_10075930	All Organisms → cellular organisms → Bacteria	2303	Open in IMG/M
3300025981\|Ga0207640_10052160	All Organisms → cellular organisms → Bacteria	2663	Open in IMG/M
3300026142\|Ga0207698_10093861	All Organisms → cellular organisms → Bacteria	2465	Open in IMG/M
3300026746\|Ga0207454_101797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	705	Open in IMG/M
3300026805\|Ga0207507_100932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	814	Open in IMG/M
3300027821\|Ga0209811_10009119	All Organisms → cellular organisms → Bacteria	3186	Open in IMG/M
3300027846\|Ga0209180_10615692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	598	Open in IMG/M
3300027873\|Ga0209814_10004641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	5199	Open in IMG/M
3300027875\|Ga0209283_10630520	Not Available	676	Open in IMG/M
3300028381\|Ga0268264_10991714	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300028716\|Ga0307311_10197024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	590	Open in IMG/M
3300028718\|Ga0307307_10058484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1138	Open in IMG/M
3300028719\|Ga0307301_10237212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	595	Open in IMG/M
3300028722\|Ga0307319_10247957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	586	Open in IMG/M
3300028744\|Ga0307318_10021793	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2065	Open in IMG/M
3300028771\|Ga0307320_10288562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	650	Open in IMG/M
3300028793\|Ga0307299_10082022	All Organisms → cellular organisms → Bacteria	1199	Open in IMG/M
3300028799\|Ga0307284_10133869	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	948	Open in IMG/M
3300028807\|Ga0307305_10069415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1626	Open in IMG/M
3300028811\|Ga0307292_10301907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	671	Open in IMG/M
3300028828\|Ga0307312_10858758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	601	Open in IMG/M
3300028878\|Ga0307278_10000004	All Organisms → cellular organisms → Bacteria	145274	Open in IMG/M
3300028878\|Ga0307278_10012941	All Organisms → cellular organisms → Bacteria	3888	Open in IMG/M
3300028880\|Ga0307300_10003282	All Organisms → cellular organisms → Bacteria	4073	Open in IMG/M
3300028884\|Ga0307308_10350886	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300028884\|Ga0307308_10624832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	517	Open in IMG/M
3300031720\|Ga0307469_10150768	All Organisms → cellular organisms → Bacteria	1740	Open in IMG/M
3300031720\|Ga0307469_11209679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	714	Open in IMG/M
3300031720\|Ga0307469_11219422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	712	Open in IMG/M
3300031720\|Ga0307469_11241154	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300031740\|Ga0307468_100334318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1120	Open in IMG/M
3300032174\|Ga0307470_11727568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	528	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.77%
Host-Associated	Host-Associated	8.23%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.44%
Plants	Host-Associated → Plants	8.23%
Aquatic	Environmental → Aquatic	6.33%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.18%
Sediment	Environmental → Aquatic → Sediment	4.43%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.43%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.80%
Freshwater	Environmental → Aquatic → Freshwater	1.90%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	1.27%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.13%
Loam	Environmental → Terrestrial → Soil → Loam	24.05%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.80%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.53%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.90%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	1.27%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.27%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	46.20%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	24.05%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.70%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.43%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.53%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.90%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	1.27%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.27%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	23.42%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	22.78%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.82%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.43%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.80%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.80%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.16%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.90%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.27%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.27%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	1.27%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.27%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.27%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.27%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.63%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.63%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2035918004	Soil microbial communities from sample at FACE Site 2 North Carolina CO2-	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001536	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-65cm-8A)- 1 week illumina	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011000	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t6i015	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012941	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300019255	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019875	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300019996	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a2	Environmental	Open in IMG/M
3300020000	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a1	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300020059	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a2	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026746	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G06K2-12 (SPAdes)	Environmental	Open in IMG/M
3300026805	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-BECK01-A (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FACENCA_861690	2035918004	Soil	MSIYELDISWATTANERRRLQWQLIVSDEVSGVFLTARDDVLAVLFSGDRKGFEALARTLAPER
JGI10216J12902_1028794633	3300000956	Soil	MSVYELDISWAMTASERRGLHWQLSTDDEVRGVFLTARDDVLAILYSGERRGFEELARALAAKASEMVR*
A1565W1_110944442	3300001536	Permafrost	MSIYELDISWATTANERRRVHWQLIVSDEVSGVFLTARADVLAVLFSGDRQGFEALARTLAPETLGTAQ*
Ga0062593_1003059242	3300004114	Soil	MSIHELDISWAMTASERRRLHWELMSCDEVSGVFLTNRDDVLAVLYSGERRGFEVLARALAPESSEPVR*
Ga0062590_1030179772	3300004157	Soil	LDISWAMTASERRRLHWELMSCDEVSGVFLTNRDDVLAVLYSGERRGFEVLARALAPESSEPVR*
Ga0062595_1025897601	3300004479	Soil	MSVYELDISWATSASERRRLRWELIASDEVKGVFLTARDDVLAVLYKGNRREFEALARTLAPEPLEATS*
Ga0062595_1026892381	3300004479	Soil	LPRRPDPMSIHELDISWAVTAAERRRLRWELIACEQIKGVFLTARDDVLAVLYSGERRGFEELTRTLSPESSETLR*
Ga0066680_107267792	3300005174	Soil	SRVVALPRRPDPMSVYELDISWAISASDRRRLRWELIASDEVKGVFLTARDDALAVLYKGNRREFEALARTLAPEPLEATW*
Ga0066688_108493781	3300005178	Soil	WATSASDRRRLRWELIASDEVKGVFLTARDDVLAVLYKGERGGFEALAWALAPEPLEAT*
Ga0066678_110401472	3300005181	Soil	MSIYELDISWAMTANERRCLQWELTASDEVSGVFLTARDEVLAVLFSGDRRGFEALARTLAPHTTPTTNERGALS*
Ga0070683_1019640281	3300005329	Corn Rhizosphere	MSIYELDISWATTANERRRLQWQLIVSDEVGGVFLTARDDVLAVLFSGDRKGFDALARTLAPKTLETTK*
Ga0070674_1005317212	3300005356	Miscanthus Rhizosphere	MSIYELDISWATTANERRRLQWQLIVSDEVTGVFLTARDDVLAVLFSGDQKGFEALARTLAPETLGMAQ*
Ga0070714_1012108661	3300005435	Agricultural Soil	MSIYELDIGWAMTANERRHLCWELIASDEVCGVFLARDDVLAVLYSGDRRGFEALARRLEPEPLEAVR*
Ga0070713_1023298491	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSIYELDISWALTASERRRLHWELIASDEVSGVFLARDDVLAVLYSGDRRGFEALARRLEPEPLEAVR*
Ga0070711_1020463082	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MSIYELDISWAITATERRRLRWDLTACDEVCGVFLTARDDVLAVLFNGDRGGFDVFARRLAPDHMTATTNEQGAWQ*
Ga0070705_1003457352	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MSIYELDISWATTASERRRLQWQLIVSDEVCGVFLTARDDVLAVLFSGDQKGFEALARTLAPETLGTAQ*
Ga0070708_1001462262	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSIYELDISWAITATERRRLRWELIASDEVSGVFLTARDDVLAVLFNGDRGVFDVFARKLAPDQMTATTNEQGALQ*
Ga0070708_1002040222	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSIYELDISWATSASEQRRLRWELIASDEVKGVFVTARDNVLAVLYSGTRRGFEALARRLAPESLATRHHDRNHQRKGAVQ*
Ga0070708_1007051281	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSIYELDISWAMTASERRYVQWELTASDEVSGVFLTARDDVLAVLFRGDRSGFDALARTLAAESPSPRS*
Ga0070708_1007064171	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSVYELDISWATSASERRRLRWELIASDEVKGVFLTARDDVLAVLYEGNRREFDALARTLAPAPLEATW*
Ga0070708_1013409052	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSIHELDISWAMTASERRPLHWERIARHEVSGVFPPARNDVLAVLCGGERRGFEARARTLAPESSETVR*
Ga0070706_1000180126	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MSIYELDISWAITATERRRLRWELIASDEVSGVFLTARDDVLAVLFNGDRAVFDVFARKLAPDQMTATTNEQGALQ*
Ga0070706_1012809332	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MSIYELDISWAMTASERRYVQWELTASDEVSGVFLTAHDDVLAVLFRGDRSGFDALARTLAAESPSPRS*
Ga0070698_1000092636	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MNIYELDIGWAATASERRYLYWMLVACDEVTGVFLTARDDVLAVLFSGNRTSFDALARTIEPGGTLQRAPW*
Ga0070698_1000113752	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MSIYELDISWATSASEQRRLRWELIASDEVKGVFVTTRDNVLAVLYGGTRRGFEALARRLAPESLATRHHDRNHQRKGAVQ*
Ga0070698_1001860692	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MSIYELDISWAMTASERRYVQWELTASDEVSGVFLTARDDVLAVLFRGDRSGFDALARTLAAGSPSPRS*
Ga0070699_1000099858	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MSIYELDIGWATTASERRYLHWMLVACDEVGGVFLTARDDVLAVLFNGDRGGFDALARTLAPETQGTGP*
Ga0070699_1000618462	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MNIYELDIGWAATASERRYLYWMLVACDEVTGVFLTARDDVLAVLFSGNRTSFDSLARTIEPGGTLQRAPW*
Ga0070699_1010254111	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MSIFELDISWATTANERRRLQWQLIVSDEVTGVFLTARDDVLAVLFSGDRKGFEALARTLAPETLGTTQ*
Ga0073909_100380932	3300005526	Surface Soil	MSIYELDISWATTANERRRLQWQLIVSDEVSGVFLTARDDVLAVLFSGDRKGFEALARTLAPETLGTTQ*
Ga0070697_1001074713	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MNIFELDIGWAATASERRYLYWMLVACDEVTGVFLTARDDVLAVLFSGNRTSFDALARTIEPDGTLQRAPW*
Ga0070697_1003351551	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MSIYELDISWAITATERRRLRWDLTACDEVCGVFLTARDDVLAVLFNGDRGGFDVFARRLAPDHMTATTNEQGA
Ga0070697_1012189582	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	AVPGRSDPMSIYELDIGWATTASERRYLHWMLVASDEVGGVFLTARDDVLAVLFNGDRGGFDALARTLTPETQGTGP*
Ga0066701_100961542	3300005552	Soil	MSIYELDISWAMTANERRCLQWELTASDEVSGVFLTARDDVLAVLFSGDRRGFEALARTLAPHTTPTTNEQGALS*
Ga0066703_101970022	3300005568	Soil	MSVYELDISWTITATERRRLRWELIACDEVSGVFLTARDDVLAVLFDGDRDGFDVFARRLTPDHMTATTDEQGALQ*
Ga0070702_1001911011	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	RRSDPMSIYELDISWATTANERRRLQWQLIVSDEVGGVFLTARDDVLAVLFSGDRKGFDALARTLAPKTLETTK*
Ga0068860_1016387721	3300005843	Switchgrass Rhizosphere	IYELDISWATTANERRRLQWQLIVSDEVGGVFLTARDDVLAVLFSGDRKGFDALARTLAPKTLETTK*
Ga0075417_100194193	3300006049	Populus Rhizosphere	MSVYELDISWATSANERRSLHWQLIACGRVAGAFLTARDDVLAVLFKGDRHAFNEWARTLEPGWALR*
Ga0070715_102872432	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MSIYELDISWALTASERRRLHWELIASDEVSGVFLARDDVLAVLYSGDRRDFESLARRLEPEPLEAVR*
Ga0070715_103238362	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MSIYELDISWATTANERRRLQWQLIVSDEVSGVFLTARDDVLAVLFSGDRKGFDALARTLAPKTLETTK*
Ga0070716_1001368142	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MSIYELDISWAITATERRRLRWDLTACDEVCGVFLTARDDVLAVLFNGDRGGFDVFGRRLAPDHMTATTNEQGAWQ*
Ga0070716_1001912412	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MSIYELDISWALTANERRHLCWELIASDEVSGVFLARDDVLAVLYSGDRRDFEALARRLEPEPLEAVR*
Ga0070716_1002680832	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MSIYELDISWATTANERRRLQWQLIVSDEVSGVFLTARDDVLAVLFSGDRKGFDALARTLAPKTLETTQ*
Ga0070712_1018487711	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	RPDPMSIYELDISWAITATERRRLRWDLTACDEVCGVFLTARDDVLAVLFNGDRGGFDVFARRLAPDHMTATTNEQGAWQ*
Ga0074054_120638142	3300006579	Soil	ELDISWATTANERRRLQWQLIVSDEVSGVFLTARDDVLAVLFRGDHKGFEALARTLAPETLGTAQ*
Ga0066659_112614242	3300006797	Soil	MSVYELDISWTITATEWRRLRWELIACDEVSGVFLTARDDVLAVLFDGDRDGFDVFARRLAPDHMTATTDEQGALQ*
Ga0075434_1021108842	3300006871	Populus Rhizosphere	MSIHELDISWAMTASERRRLHWELMACDEVSGVFLTNRDDVLAVLYNGERRGFELLARTLAPESSEPVR*
Ga0075424_1008461102	3300006904	Populus Rhizosphere	MSIHELDISWAMTASERRRLHWELMACDEVSGVFLTNRDDVLAVLYSGERRGFEVLARTLAPESSEPVR*
Ga0074063_117593821	3300006953	Soil	MSIYELDISWATTASERRRLQWQLIVSDEVSGVFLTARDDVLAVLFSGDHKGFEALARTLAPETLGMAQ*
Ga0066710_1013650242	3300009012	Grasslands Soil	MSVYELDISWAISASDRRRLRWELIASDEVKGVFLTARDDVLAVLYKGERREFEALARVLAPEPLEAAW
Ga0099829_100242042	3300009038	Vadose Zone Soil	MSIYELDISWTITATERRRVRWELIACDEVSGVFLTARDDVLAVLFNGDRGGFDVFARRLAPDHMTATTNEQGALQ*
Ga0099829_102783132	3300009038	Vadose Zone Soil	MNIYELDIGWATTASEHRYLRWMLVASDEVGGVFLTARDDVLAVLFSGDRTSFDALTRMIEPGGTLQEVPW*
Ga0099829_103642842	3300009038	Vadose Zone Soil	MSIYELDISWAMTANERRCLQWELTASDEVSGVFLTARDDVLAVLFSGDRRGFEALSRTLAPHTTPTTNEQGALS*
Ga0099829_114315341	3300009038	Vadose Zone Soil	MSIYELDISWAMTASERRYLQWELIASDEVSGVFLTARDDVLAVLFRGDRRGFDALARTLAAESTSPRS*
Ga0099830_104153142	3300009088	Vadose Zone Soil	MSIYELDISWTVTATERRRLRWELIACDEVSGVFVTARDDVLAVLFNGDRGGFDVFARRLAPDHMTATTNEQGALQ*
Ga0099827_118856131	3300009090	Vadose Zone Soil	MSIYELDISWAMTASERRRVQWELIASDEVSGVFLTARDDVLAVLFSGDRRGFEALSRTLAPHTTPATNEQGAL
Ga0066709_1005089752	3300009137	Grasslands Soil	MSVYELDISWTITATEWRRLRWELIACDEVSGVFLTARDDVLAVLFNGDRGGFDVFARKLAPDHMTATTNEQGALQ*
Ga0075423_100307157	3300009162	Populus Rhizosphere	MSVYELDISWATSANERRSLHWQLIACGCVAGAFLTARDDVLAVLFKGDRHAFNEWARTLEPGWALR*
Ga0134128_102027091	3300010373	Terrestrial Soil	MSIYELDISWATTASERRRLQWQLIVSDEVCGVFLTARDDVLAVLFSGDRKGFDALARTLAPKTLETTQ*
Ga0134126_101537263	3300010396	Terrestrial Soil	MSIYELDISWAMTADDRRRLHWQLIVSDEVTGVFLTARDDVLAVLFSGDRKGFDALARTLAPETLGTAQ*
Ga0134122_101501282	3300010400	Terrestrial Soil	MSIYELDISWAMTADDRRRLHWQLIVSDEVTGVFLTARDDVLAILFSGDRKGFEALARTLAPETLGTAQ*
Ga0134122_101558882	3300010400	Terrestrial Soil	MSIYELDISWATTASERRRLQWQLIVSDEVCGVFLTARDDVLAVLFSGDQKGFEALARTLAPETLGMAQ*
Ga0134121_102287842	3300010401	Terrestrial Soil	MSIYELDISWATTANERRRLQWQLIVSDEVSGVFLTARDDVLAVLFSGDQKGFEALARTLAPETLGTAQ*
Ga0134123_118294012	3300010403	Terrestrial Soil	MSIYELDISWAMTADDRRRLHWQLIVSDEVCGVFLTARDDVLAVLFSSDQKGFEALARTLAPETLGTAQ*
Ga0138513_1000538211	3300011000	Soil	MSIYELDISWAITADERRRLHWQLIVSDEVSGVFLTARDDVLAILFSGDHKGFDALARTLAPETLGTAE*
Ga0137392_111836662	3300011269	Vadose Zone Soil	MSVYELDISWAITATERRRLRWELIACDEVSGVFVTARDDVLAVLFNGDRGGFDVFARRLAPDHMTATTNEQGALQ*
Ga0137364_100624314	3300012198	Vadose Zone Soil	MSIYELDISWAISASDRRRLRWELIASDEVKGVFLTARDDVLAVLFNGDRGGFDALARRLAPGT*
Ga0137382_100482433	3300012200	Vadose Zone Soil	MSIYALDIGWATTASERRYLHWMLVSCDEVGGVFLTARDDVLAVLFNGDRSGFDALARTLAPETLGTEP*
Ga0137382_100551512	3300012200	Vadose Zone Soil	MSVYELDISWTITATERRRLRWELIACDEVSGVFLTARDDVLAVLFNGDRGGFDALARRLAPGT*
Ga0137382_104737501	3300012200	Vadose Zone Soil	ISWTITATERRRLRWELIACDEVSGVFLTARDDVLAVLFNGDRGGFDVFARKLAPNHMTATTNEQGALQ*
Ga0137365_105483011	3300012201	Vadose Zone Soil	MNIYELDIGWAATASERRYLYWMLVACDEVGGVFLTARDDVLAVLFSGNRTSFDALARMIEPGGTLQGAPW*
Ga0137376_100897932	3300012208	Vadose Zone Soil	MSIYELDIGWATTASERRYLHWMLVSCDEVGGVFLTARDDVLAVLFNGDRSGFDALARTLAPETLGTEP*
Ga0137376_101501763	3300012208	Vadose Zone Soil	MSVYELDISWAISASDRRRLRWELIASDEVKGVFLTARDDVLAVFYKGERRDFEALARALAPEPLEAAW*
Ga0137376_112614412	3300012208	Vadose Zone Soil	YELDISWTITATERRHLRWELIACDEVSGVFLTARDDVLAVLFNGDRGGFDALARRLAPGT*
Ga0137378_107041732	3300012210	Vadose Zone Soil	MSVYELDISWTITATERRRLRWELIACDEVSGVFLTARDDVLAVLFDGDRDGFDVFARRLAPDHVTATTDEQGALQ*
Ga0137377_103888413	3300012211	Vadose Zone Soil	MSVYELDISWAISASDRRRLRWELIASDEVKGVFLTARDDVLAVLYKGERRDFEALARALAPEPLEAAW*
Ga0137377_105785892	3300012211	Vadose Zone Soil	MSIYELDISWTITATERRRLRWELIACDEVSGVFLTARDDVLAVLFNGDRGGFDVFARKLAPNHMTATTNEQGALQ*
Ga0137371_106094073	3300012356	Vadose Zone Soil	ALPRRSDPMNIYELDIGWAATASERRYLYWMLVACDEVGGVFLTARDDVLAVLFSGNRTSFDALARMIEPGGTLQGAPW*
Ga0137384_111293061	3300012357	Vadose Zone Soil	MSIYELEIGWAKTANERRYLRWELLAHDEVRGVFQTAREDVLAVLFSGNRPSFDAHARMIEAAGTLQGAPW*
Ga0137360_104485362	3300012361	Vadose Zone Soil	MSVYELDISWTITESEWRRLRWELIACDEVSGVFLTARDDVLAVLFDGDRDGFDVFARRLAPDHMTATTDEQGALQ*
Ga0137359_113710422	3300012923	Vadose Zone Soil	MSVYELDISWTLTASEWRRLRWEPIACDEVSGVFLTARDDVLAVLFDGDRDGFDVFARRLAPDRMTATTDEQGALQ*
Ga0137407_113793462	3300012930	Vadose Zone Soil	MSIYELDIGWATTASERRYLHWMLVACDEVGGVFLTARDDVLAVLFNGDRGGFDALARTL
Ga0162652_1000240442	3300012941	Soil	MSIYELDISWAMTADERRRLQWQLIVSDEVSGVFLTARDDVLAILFSGDHKGFEALARTLAPETLGTAQ*
Ga0164300_101380191	3300012951	Soil	MSIYELDISWATTASERRRLQWQLIVSDEVSGVFLTARDDVLAVLFSGDRKGFEALARTLAPETLGTAQ*
Ga0164298_103129212	3300012955	Soil	MSIYELDISWATTANERRRLQWQLIVSDEVTGVFLTARDDVLAVLFSGDQKGFEALARTLAPETLGTAQ*
Ga0164303_112607002	3300012957	Soil	MSIYELDISWATTASERRRLQWQLIASDEVSGVFLTARDDVLAVLFSGDRKGFEALARTLAPETLETAQ*
Ga0164299_103051162	3300012958	Soil	MSIYELDISWATTASERRRLQWQLIVSDEVSGVFLTARDDVLAVLFSGDHKGFEALARTLAPEKLGTAQ*
Ga0164301_103260532	3300012960	Soil	MSIYELDISWATTANERRRLQWQLIVSDEVSGVFLTARDDVLAVLFSGDRKGFEALARTLAPETLGTAQ*
Ga0164301_114778182	3300012960	Soil	MSIYELDISWATTANDRRRLHWQLIVSDEVSGVFLTARDDVLAVLFSGDRQRFEALARTLAPETLGTVR*
Ga0164301_118875331	3300012960	Soil	MSIYELDISWATTASERRRLQWQLIVSDEVCCVFLTARDDVLAVLFSGDQKGFEALARTLAPETLGMAQ*
Ga0164307_100231992	3300012987	Soil	MSIYELDISWATTASERRRLQWQLIVSDEVSGVFLTARDDVLAVLFSGDHKGFEALARTLAPETLGTAQ*
Ga0164306_108960282	3300012988	Soil	MSIYELDISWATTASERRRLQWQLIVSHEVSGVFLTARDDVLAVLFSGDHKGFEALARTLAPETLGTAQ*
Ga0164305_114851012	3300012989	Soil	PRRSDPMSIYELDISWATTANERRRLHWQLIVSDEVSGVFLTARDDVLAVLFSGDRQRFEALARTLAPETLGTVQ*
Ga0164305_114856932	3300012989	Soil	MSIYELDISWATTANERRRLQWQLIVSDEVSGVFLTARDDVLAVLFSGDRKGFEALARTLAPETLET
Ga0157371_104299952	3300013102	Corn Rhizosphere	MSIYELDISWATTANERRRLQWQLIVSDEVGGVFLTARDDVLAVLFSGDRKGFDALARTLAPKTLETTQ*
Ga0132258_103619432	3300015371	Arabidopsis Rhizosphere	MSIYELDISWALTAGERCRLRWELIACDEVKGVFLTARDDVLAVLYAGERRGFEELTRALASESSGTLR*
Ga0132255_1021255362	3300015374	Arabidopsis Rhizosphere	MSIYEFDISWAMTVGERCRLRWELIACDEVKGVFLTARDDVLAVLYAGERRGFEELTRALASE
Ga0184605_1000026411	3300018027	Groundwater Sediment	MSIYELDISWAITATERRCLHWELIASDEVSGVFLTARDDVLAVLFNGDRSGFDALARTLAPETLRTVR
Ga0184605_100851052	3300018027	Groundwater Sediment	MSIYELDIGWATTASERRYLHWMLVACDEVGGVFLTARDDVLAVLFNGDRKGFDALARTLAPETLGTEP
Ga0184621_100003564	3300018054	Groundwater Sediment	MSIYELDISWAITATERRCLHWELIASDEVSGVFLTARDDVLAVLFNGDRSGFDALARTLAPETLRAVR
Ga0184621_101423151	3300018054	Groundwater Sediment	VVALPRRPNPMSIYELDISWAITPTALRRLHWGLIAEDGVNGVFLTTRDDVLAVLFNGDRGAFDALARTLTPDPYDATATTDEQGALT
Ga0184619_100441272	3300018061	Groundwater Sediment	MSIYELDIGWATTASERRYLHWMLVACDEVGGVFLTARDDVLAVLFNGDRGGFDALARTLAPETLGTEP
Ga0184619_100933713	3300018061	Groundwater Sediment	MSIYELDISWAITASERRWLHWELIASDEVSGVFLTARDDVLAVLFNGDRGRFDALARTLAPETPGTVQ
Ga0184618_100250962	3300018071	Groundwater Sediment	MSIHELDIGWATTAGERRYLHWMLVACDDVCGVFLTARDDVLAVLFNGDRSGFDALARTLVPETLGTEP
Ga0184643_14333242	3300019255	Groundwater Sediment	MSIHELDIGWATTAGERRYLHWMLVACDDVCGVFLTARDDVLAVLFNGDRSGFDALARTRAPETLGTGP
Ga0193701_10976352	3300019875	Soil	MSIYELDISWAITATERRCLHWELIASDEVSGVFLTARDDVLAVLFNGDRSGFDALARTLAPETLGTEP
Ga0193727_10426662	3300019886	Soil	MSIYELDISWATTADERRRLHWQLIVSDEVSGVFLTARDDVLAILFSGDSKGFEALARTLAPETLGTAQ
Ga0193728_11337062	3300019890	Soil	MSIYELDIGWATTASERRYLHWMLVACDEVGGVFLTARDDVLAVLFNGDRSGFDALARTLAPETLGTEP
Ga0193693_10146792	3300019996	Soil	MSIFELDISWATTANERRRLQWQLIVSDEVSGVFLTARDDVLAVLFSGDRKGFEALARTVAPETLGTAQ
Ga0193692_10230712	3300020000	Soil	MSIYELDISWATTANERRRLQWQLIVSDEVSGVFLTARDDVLAVLFSGDRKGFEALARTVAPETLGTAQ
Ga0193730_10048391	3300020002	Soil	GGWTRVVAVPHRSDPMSIHELDIGWATTAGERRYLHWMLVACDDVCGVFLTARDDVLAVLFNGDRSGFDALARTLVPETLGTEP
Ga0193730_10855812	3300020002	Soil	MSIYELDISWAMTADERRRLHWQLIVSDEVIGVFLTARDDVLAILFSGDRKGFEALAPTLAPETLGT
Ga0193745_10436592	3300020059	Soil	MSIYELDIGWATTASERRYLHWMLVACDEVGGVFLTARDDVLAVLFNGDRSGFDALARTLVPETLGTEP
Ga0210382_100868902	3300021080	Groundwater Sediment	MSIYELDIGWATTASERRYLHWMLVACDEVGGVFLTARDDVLAVLFNGDRSGFDAL
Ga0210382_102243052	3300021080	Groundwater Sediment	MSIYELDIGWATTASERRYLHWMLVACDEVGGVFLTARDDVLAVLFNGDRSGFDALARTRAPVTLGTGP
Ga0193719_100120513	3300021344	Soil	MSIYELDIGWATTASERRYLHWMLVACDEVGGVFLTARDDVLAVLFNGDRRGFDALARTLAPETLGTEP
Ga0193719_102766412	3300021344	Soil	MSIYELDISWAITATALRRLHWGLIADDEVSGVFLTTRDDVLAVLFNSDRGAFDALARTLTPDPYDATATTNEQGALT
Ga0207685_100808352	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MSIYELDISWALTASERRRLHWELIASDEVSGVFLARDDVLAVLYSGDRRDFESLARRLEPEPLEAVR
Ga0207685_101209432	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MSIYELDISWAITATERRRLRWDLTACDEVCGVFLTARDDVLAVLFNGDRGGFDVFARRLAPDHMTATTNEQGAWQ
Ga0207699_100904112	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MSIYELDISWALTANERRQLCWELIASDEVCGVFLARDDVLAVLYCGDRRDFESLARRLEPEPLEAVR
Ga0207684_100408353	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MSIYELDISWAITATERRRLRWELIASDEVSGVFLTARDDVLAVLFNGDRAVFDVFARKLAPDQMTATTNEQGALQ
Ga0207684_103478992	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MSIYELDISWATSASEQRRLRWELIASDEVKGVFVTARDNVLAVLYSGTRRGFEALARRLAPESLATRHHDRNQQR
Ga0207684_105199422	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	WAMTASERRYVQWELTASDEVSGVFLTAHDDVLAVLFRGDRSGFDALARTLAAESPSPRS
Ga0207684_106807772	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MSVYELDISWATSASERRRLRWELIASDEVKGVFLTARDDVLAVLYEGNRREFDALARTLAPSPLEATW
Ga0207693_111869542	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MNIYELDISWAITAHERRRLRWELTASEEVGGVFLTARDDTLAVLYKSDRGGFEALVRTLVPGSLEALQ
Ga0207646_102336132	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MSIYELDISWAMTASERRYVQWELTASDEVSGVFLTAHDDVLAVLFRGDRSGFDALARTLAAESPSPRS
Ga0207665_100759301	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MSIYELDISWAITATERRRLRWDLTACDEVCGVFLTARDDVLAVLFNGDRGGFDVFGRRLAPDHMTATTNEQGAWQ
Ga0207640_100521603	3300025981	Corn Rhizosphere	SDPMSIYELDISWATTANERRRLQWQLIVSDEVGGVFLTARDDVLAVLFSGDRKGFDALARTLAPKTLETTK
Ga0207698_100938611	3300026142	Corn Rhizosphere	PMSIYELDISWATTANERRRLQWQLIVSDEVGGVFLTARDDVLAVLFSGDRKGFDALARTLAPKTLETTK
Ga0207454_1017971	3300026746	Soil	MSIYELDISWATTANERRRLQWQLIVSDEVGGVFLTARDDVLAVLFSGDGKGFDALARTLAPKTLETT
Ga0207507_1009322	3300026805	Soil	MSIHELDISWAMTASERRRLHWELMSCDEVSGVFLTNRDDVLAVLYSGERRGFEVLARALAPESSEPVR
Ga0209811_100091193	3300027821	Surface Soil	MSIYELDISWATTANERRRLQWQLIVSDEVSGVFLTARDDVLAVLFSGDRKGFEALARTLAPETLGTTQ
Ga0209180_106156922	3300027846	Vadose Zone Soil	MSIYELDISWTITATERRRVRWELIACDEVSGVFLTARDDVLAVLFNGDRGGFDVFARRL
Ga0209814_100046416	3300027873	Populus Rhizosphere	MSVYELDISWATSANERRSLHWQLIACGRVAGAFLTARDDVLAVLFKGDRHAFNEWARTLEPGWALR
Ga0209283_106305202	3300027875	Vadose Zone Soil	MNIYELDIGWATTASEHRYLRWMLVASDEVGGVFLTARDDVLAVLFSGDRTSFDALTRMIEPGGTLQEVPW
Ga0268264_109917142	3300028381	Switchgrass Rhizosphere	MSIYELDISRATTANERRRLQWQLIVSDEVGGVFLTARDDVLAVLFSGDRKGFDALARTLAPKTLETTK
Ga0307311_101970242	3300028716	Soil	MSIYELDISWAINPTALRRLHWGLIAEDGVSGVFLTTRDDVLAVLFNGDRGAFDALARTLTPDPYDATATTDEQGALT
Ga0307307_100584842	3300028718	Soil	MSIYELDIGWATTASERRYLHWMLVACDEVRGVFLTARDDVLAVLFNGDRRGFDALARTLAPETLGTEP
Ga0307301_102372121	3300028719	Soil	PARCRRTGGWTRVVAVPRRSDPMSIYELDISWATTADERRRLHWQLIVSDEVSGVFLTARDDVLAILFTGDHKGFEALARTLAPETLGTAQ
Ga0307319_102479571	3300028722	Soil	MSIYELDISWATTADERRRLHWQLIVSDEVSGVFLTARDDVLAILFTGDHKGFEALARTLAPETLGTAQ
Ga0307318_100217932	3300028744	Soil	MSIYELDISWAINPTALRRLHWGLIAEDGVSGVFLTTRDDVLAVLFNGDRGAFDALARTLTPDPYDATATTNEQGALT
Ga0307320_102885621	3300028771	Soil	MSIYELDISWAINPTALRRLHWGLIAEDGVSGVFLTTRDDVLAVLFNGDRGAFDALARTLTPDPYDATATTNEQGAPT
Ga0307299_100820222	3300028793	Soil	MSIYELDIGWATTASERRYLHWMLVACDEVGGVFLTARDDVLAVLFNGDRMGFDALARTLAPETLGTEP
Ga0307284_101338691	3300028799	Soil	IYELDISWAITATALRRLHWGLIADDEVSGVFLTTRDDVLAVLFNSDRGAFDALARTLTPDPYDAPATTDEQGALT
Ga0307305_100694152	3300028807	Soil	MSIYELDISWAITATALRRLHWGLIADDEVSGVFLTTRDDVLAVLFNSDRGAFDALARTLTPDPYDATATTDEQGALT
Ga0307292_103019071	3300028811	Soil	MSIYELDIGWATTASERRYLHWMLVACDEVGGVFLTARDDVLAVLFNGDRRGFDALARTLAPETLGT
Ga0307312_108587582	3300028828	Soil	MSIYELDIGWATTASERRYLHWMLVACDEVGGVFLTARDDVLAVLFNGDRMGFDALARTL
Ga0307278_1000000454	3300028878	Soil	MSIYELDIGWATTASERRYLHWMLVACDEVGGVFLTARDDMLAVLFNGDRGGFDALARTLAPETQGTGS
Ga0307278_100129412	3300028878	Soil	MSIYELDISWAITATLLRRLHWGLIADDEVSGVFLTTRDDVLAVLFNSDRGAFDALARTLTPDPYDATATTDEQGALT
Ga0307300_100032824	3300028880	Soil	ITATERRCLHWELIASDEVSGVFLTARDDVLAVLFNGDRSGFDALARTLAPETLRTVR
Ga0307308_103508861	3300028884	Soil	DIGWATTASERRYLHWMLVACDEVRGVFLTARDDVLAVLFNGDRRGFDALARTLAPETLGTEP
Ga0307308_106248321	3300028884	Soil	RARQRSRVVALPRRPNPMSIYELDISWAITATALRRLHWGLIAEDGVSGVFLTTRDDVLAVLFNGDRGAFDALARTLTPDPYDATATTDEQGALT
Ga0307469_101507683	3300031720	Hardwood Forest Soil	MSIYELDISWAMTVGERRHLHWELMACEEVKGVFLTARDDMLAILYGGERRGFDELARALTPESSGTAR
Ga0307469_112096792	3300031720	Hardwood Forest Soil	MSIYELDIGWALTASERRGLCWELIASDEVRGVFLARDDVLAVLYGGDRRGFEALARRLSPGSLEAVR
Ga0307469_112194222	3300031720	Hardwood Forest Soil	VNAYELDTSWATTAEERRLIYWELLGSDEVRGVFATSRDDALAVLFSGDRGAFEAWARTLEPDAVPNEVRR
Ga0307469_112411542	3300031720	Hardwood Forest Soil	MSIYELDISWAMTADDRRRLHWQLIVSDEVTGVFLTARDDVLAILFSGDRKGFEALARTLAPETLGTAQ
Ga0307468_1003343181	3300031740	Hardwood Forest Soil	MSIYELDISWAMTADDRRRLHWQLIVSDEVSGVFLTARDDVLAILFTGDRQGFEALARTLAPETLE
Ga0307470_117275682	3300032174	Hardwood Forest Soil	VVAVPRRSDPMSIYELDISWAMTADDRRRLHWQLIVSDEVSGVFLTARDDVLAVLFSGDRKGFEALARTLAPETLETTQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F042600

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences