NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F042578

Metagenome / Metatranscriptome Family F042578

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F042578
Family Type Metagenome / Metatranscriptome
Number of Sequences 158
Average Sequence Length 52 residues
Representative Sequence VKSKKTKSQLNQAQVDVSKSKIESEVKAHSKVIKKIDHNNFHRALEAFSDCV
Number of Associated Samples 137
Number of Associated Scaffolds 158

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 7.75 %
% of genes near scaffold ends (potentially truncated) 30.38 %
% of genes from short scaffolds (< 2000 bps) 68.35 %
Associated GOLD sequencing projects 129
AlphaFold2 3D model prediction Yes
3D model pTM-score0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (73.418 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater
(20.886 % of family members)
Environment Ontology (ENVO) Unclassified
(62.658 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(90.506 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 51.25%    β-sheet: 0.00%    Coil/Unstructured: 48.75%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.36
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 158 Family Scaffolds
PF01738DLH 62.03
PF02597ThiS 17.72
PF05690ThiG 8.23
PF01098FTSW_RODA_SPOVE 3.80
PF08042PqqA 1.27
PF067253D 1.27
PF04379DUF525 1.27
PF03562MltA 0.63
PF06723MreB_Mbl 0.63
PF02881SRP54_N 0.63
PF00905Transpeptidase 0.63

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 158 Family Scaffolds
COG1977Molybdopterin synthase sulfur carrier subunit MoaDCoenzyme transport and metabolism [H] 17.72
COG2104Sulfur carrier protein ThiS (thiamine biosynthesis)Coenzyme transport and metabolism [H] 17.72
COG0214Pyridoxal 5'-phosphate synthase subunit PdxSCoenzyme transport and metabolism [H] 8.23
COG2022Thiazole synthase ThiGH, ThiG subunit (thiamin biosynthesis)Coenzyme transport and metabolism [H] 8.23
COG2070NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase familyGeneral function prediction only [R] 8.23
COG0772Peptodoglycan polymerase FtsW/RodA/SpoVECell cycle control, cell division, chromosome partitioning [D] 3.80
COG2967Uncharacterized conserved protein ApaG affecting Mg2+/Co2+ transportInorganic ion transport and metabolism [P] 1.27
COG1077Cell shape-determining ATPase MreB, actin-like superfamilyCell cycle control, cell division, chromosome partitioning [D] 0.63
COG2821Membrane-bound lytic murein transglycosylaseCell wall/membrane/envelope biogenesis [M] 0.63

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms73.42 %
UnclassifiedrootN/A26.58 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000115|DelMOSum2011_c10081747All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → Methylophilales bacterium1119Open in IMG/M
3300000137|LP_F_10_SI03_10DRAFT_c1037613All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales688Open in IMG/M
3300001346|JGI20151J14362_10069143All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales1387Open in IMG/M
3300001348|JGI20154J14316_10073871All Organisms → cellular organisms → Bacteria1239Open in IMG/M
3300001348|JGI20154J14316_10086696All Organisms → cellular organisms → Bacteria1065Open in IMG/M
3300001348|JGI20154J14316_10101431All Organisms → cellular organisms → Bacteria916Open in IMG/M
3300001352|JGI20157J14317_10112807Not Available941Open in IMG/M
3300001352|JGI20157J14317_10135155All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales798Open in IMG/M
3300001354|JGI20155J14468_10057117All Organisms → cellular organisms → Bacteria1603Open in IMG/M
3300001354|JGI20155J14468_10076458All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales1267Open in IMG/M
3300001589|JGI24005J15628_10003809All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC21817593Open in IMG/M
3300003478|JGI26238J51125_1037657All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1041Open in IMG/M
3300003583|JGI26253J51717_1006688All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC21813588Open in IMG/M
3300003583|JGI26253J51717_1012278All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC21812295Open in IMG/M
3300003592|JGI26246J51724_1003699All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC21816344Open in IMG/M
3300004279|Ga0066605_10282777All Organisms → cellular organisms → Bacteria → Proteobacteria613Open in IMG/M
3300004279|Ga0066605_10289714Not Available604Open in IMG/M
3300004279|Ga0066605_10384373All Organisms → cellular organisms → Bacteria → Proteobacteria505Open in IMG/M
3300005078|Ga0070770_10136964All Organisms → cellular organisms → Bacteria886Open in IMG/M
3300005086|Ga0072334_10912397All Organisms → cellular organisms → Bacteria → Proteobacteria500Open in IMG/M
3300005239|Ga0073579_1660885All Organisms → cellular organisms → Bacteria → Proteobacteria780Open in IMG/M
3300005838|Ga0008649_10059451All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1661Open in IMG/M
3300005838|Ga0008649_10299013All Organisms → cellular organisms → Bacteria → Proteobacteria602Open in IMG/M
3300006164|Ga0075441_10001808All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → Methylophilales bacterium10159Open in IMG/M
3300006191|Ga0075447_10128373Not Available862Open in IMG/M
3300006621|Ga0101441_107824All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2052Open in IMG/M
3300006622|Ga0101442_116880All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales2376Open in IMG/M
3300007229|Ga0075468_10028788All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales1995Open in IMG/M
3300007280|Ga0101452_121846All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2993Open in IMG/M
3300007551|Ga0102881_1072912All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria956Open in IMG/M
3300007557|Ga0102821_1146132All Organisms → cellular organisms → Bacteria → Proteobacteria601Open in IMG/M
3300007637|Ga0102906_1016904All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales2258Open in IMG/M
3300007655|Ga0102825_1057691All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria790Open in IMG/M
3300007863|Ga0105744_1014336All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2026Open in IMG/M
3300008253|Ga0105349_10293044Not Available677Open in IMG/M
3300008993|Ga0104258_1031727All Organisms → cellular organisms → Bacteria992Open in IMG/M
3300008999|Ga0102816_1172835All Organisms → cellular organisms → Bacteria → Proteobacteria672Open in IMG/M
3300009071|Ga0115566_10693743All Organisms → cellular organisms → Bacteria → Proteobacteria565Open in IMG/M
3300009080|Ga0102815_10370938All Organisms → cellular organisms → Bacteria794Open in IMG/M
3300009086|Ga0102812_10103318All Organisms → cellular organisms → Bacteria → Proteobacteria1565Open in IMG/M
3300009436|Ga0115008_11580407Not Available509Open in IMG/M
3300009476|Ga0115555_1211720All Organisms → cellular organisms → Bacteria → Proteobacteria796Open in IMG/M
3300009496|Ga0115570_10138174Not Available1151Open in IMG/M
3300009497|Ga0115569_10267690All Organisms → cellular organisms → Bacteria → Proteobacteria763Open in IMG/M
3300009498|Ga0115568_10219688Not Available868Open in IMG/M
3300009507|Ga0115572_10597812Not Available608Open in IMG/M
3300009508|Ga0115567_10877919All Organisms → cellular organisms → Bacteria → Proteobacteria533Open in IMG/M
3300009544|Ga0115006_10201403All Organisms → cellular organisms → Bacteria1761Open in IMG/M
3300012413|Ga0138258_1343841Not Available975Open in IMG/M
3300013010|Ga0129327_10928877All Organisms → cellular organisms → Bacteria → Proteobacteria501Open in IMG/M
3300017697|Ga0180120_10135813All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1050Open in IMG/M
3300017724|Ga0181388_1060870All Organisms → cellular organisms → Bacteria906Open in IMG/M
3300017749|Ga0181392_1056830All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1197Open in IMG/M
3300017749|Ga0181392_1147157All Organisms → cellular organisms → Bacteria690Open in IMG/M
3300017770|Ga0187217_1299668All Organisms → cellular organisms → Bacteria → Proteobacteria518Open in IMG/M
3300019198|Ga0180033_108286All Organisms → cellular organisms → Bacteria → Proteobacteria562Open in IMG/M
3300020165|Ga0206125_10003833All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC218113926Open in IMG/M
3300020165|Ga0206125_10115111All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1119Open in IMG/M
3300020166|Ga0206128_1076668All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1517Open in IMG/M
3300020169|Ga0206127_1264733All Organisms → cellular organisms → Bacteria587Open in IMG/M
3300020185|Ga0206131_10255306All Organisms → cellular organisms → Bacteria814Open in IMG/M
3300020185|Ga0206131_10261104All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria800Open in IMG/M
3300020187|Ga0206130_10271994All Organisms → cellular organisms → Bacteria751Open in IMG/M
3300020187|Ga0206130_10365337All Organisms → cellular organisms → Bacteria → Proteobacteria592Open in IMG/M
3300020335|Ga0211690_1129752All Organisms → cellular organisms → Bacteria530Open in IMG/M
3300020358|Ga0211689_1009356All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC21813751Open in IMG/M
3300020385|Ga0211677_10024133All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales3005Open in IMG/M
3300020388|Ga0211678_10071964All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1574Open in IMG/M
3300020396|Ga0211687_10120978All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1095Open in IMG/M
3300020452|Ga0211545_10030242All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales2684Open in IMG/M
3300021085|Ga0206677_10156919All Organisms → cellular organisms → Bacteria1011Open in IMG/M
3300021087|Ga0206683_10053815All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales2272Open in IMG/M
3300021389|Ga0213868_10257100All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales1018Open in IMG/M
3300021957|Ga0222717_10136847All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1503Open in IMG/M
3300021959|Ga0222716_10222350All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales1182Open in IMG/M
3300021959|Ga0222716_10738319All Organisms → cellular organisms → Bacteria → Proteobacteria518Open in IMG/M
(restricted) 3300022920|Ga0233426_10010904All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC21815668Open in IMG/M
(restricted) 3300022931|Ga0233433_10221927All Organisms → cellular organisms → Bacteria815Open in IMG/M
3300023699|Ga0228695_1061032All Organisms → cellular organisms → Bacteria535Open in IMG/M
3300023704|Ga0228684_1045377All Organisms → cellular organisms → Bacteria682Open in IMG/M
3300024180|Ga0228668_1044946All Organisms → cellular organisms → Bacteria894Open in IMG/M
3300024180|Ga0228668_1069832All Organisms → cellular organisms → Bacteria662Open in IMG/M
3300024192|Ga0228637_1052673All Organisms → cellular organisms → Bacteria821Open in IMG/M
3300024221|Ga0228666_1056676All Organisms → cellular organisms → Bacteria796Open in IMG/M
3300024223|Ga0228601_1048793All Organisms → cellular organisms → Bacteria → Proteobacteria579Open in IMG/M
3300024226|Ga0228667_1082893All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria604Open in IMG/M
(restricted) 3300024252|Ga0233435_1188644All Organisms → cellular organisms → Bacteria603Open in IMG/M
(restricted) 3300024255|Ga0233438_10357256All Organisms → cellular organisms → Bacteria → Proteobacteria543Open in IMG/M
(restricted) 3300024258|Ga0233440_1082861All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1061Open in IMG/M
3300024291|Ga0228660_1120887All Organisms → cellular organisms → Bacteria → Proteobacteria519Open in IMG/M
3300024291|Ga0228660_1130102Not Available500Open in IMG/M
3300024326|Ga0228652_1111995All Organisms → cellular organisms → Bacteria → Proteobacteria618Open in IMG/M
3300024328|Ga0228635_1071740All Organisms → cellular organisms → Bacteria856Open in IMG/M
3300024328|Ga0228635_1116323All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria591Open in IMG/M
(restricted) 3300024336|Ga0233447_1204291All Organisms → cellular organisms → Bacteria → Proteobacteria501Open in IMG/M
3300024428|Ga0233396_1132271All Organisms → cellular organisms → Bacteria → Proteobacteria566Open in IMG/M
3300025545|Ga0209142_1040702All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales1286Open in IMG/M
3300025590|Ga0209195_1016357All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales2461Open in IMG/M
3300025636|Ga0209136_1059699All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales1237Open in IMG/M
3300025656|Ga0209054_1091339All Organisms → cellular organisms → Bacteria861Open in IMG/M
3300025666|Ga0209601_1079332All Organisms → cellular organisms → Bacteria1008Open in IMG/M
3300025667|Ga0209043_1025965All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales2004Open in IMG/M
3300025676|Ga0209657_1125052All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales754Open in IMG/M
3300025676|Ga0209657_1153793All Organisms → cellular organisms → Bacteria646Open in IMG/M
3300025688|Ga0209140_1032371All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales1915Open in IMG/M
3300025729|Ga0209558_1184178Not Available678Open in IMG/M
3300025806|Ga0208545_1039046All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales1474Open in IMG/M
3300025809|Ga0209199_1155625All Organisms → cellular organisms → Bacteria848Open in IMG/M
3300025890|Ga0209631_10359528All Organisms → cellular organisms → Bacteria → Proteobacteria685Open in IMG/M
3300025892|Ga0209630_10026255All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC21813836Open in IMG/M
3300025892|Ga0209630_10333925All Organisms → cellular organisms → Bacteria677Open in IMG/M
3300025897|Ga0209425_10447253All Organisms → cellular organisms → Bacteria → Proteobacteria609Open in IMG/M
3300026406|Ga0247565_1020752All Organisms → cellular organisms → Bacteria902Open in IMG/M
3300026466|Ga0247598_1154563All Organisms → cellular organisms → Bacteria → Proteobacteria544Open in IMG/M
3300026468|Ga0247603_1085782All Organisms → cellular organisms → Bacteria646Open in IMG/M
3300026471|Ga0247602_1072654All Organisms → cellular organisms → Bacteria929Open in IMG/M
3300026500|Ga0247592_1116209All Organisms → cellular organisms → Bacteria642Open in IMG/M
3300027077|Ga0208941_1016353All Organisms → cellular organisms → Bacteria → Proteobacteria1014Open in IMG/M
3300027522|Ga0209384_1000872All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC218117078Open in IMG/M
3300028008|Ga0228674_1154255All Organisms → cellular organisms → Bacteria763Open in IMG/M
3300028134|Ga0256411_1125364Not Available860Open in IMG/M
3300028194|Ga0257106_1102903All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1029Open in IMG/M
3300028273|Ga0228640_1073616All Organisms → cellular organisms → Bacteria666Open in IMG/M
3300028418|Ga0228615_1108573All Organisms → cellular organisms → Bacteria752Open in IMG/M
3300031519|Ga0307488_10293677All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1050Open in IMG/M
3300031579|Ga0308134_1060881Not Available862Open in IMG/M
3300031659|Ga0307986_10005098All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC21818760Open in IMG/M
3300032073|Ga0315315_10995361All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria752Open in IMG/M
3300032088|Ga0315321_10718835All Organisms → cellular organisms → Bacteria577Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater20.89%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine11.39%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine9.49%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine8.86%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine7.59%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater5.70%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine5.06%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater5.06%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine3.16%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater3.16%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous2.53%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater2.53%
Marine Surface WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water1.90%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water1.90%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine1.27%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient1.27%
Methane Seep MesocosmEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Methane Seep Mesocosm1.27%
WaterEnvironmental → Aquatic → Unclassified → Unclassified → Unclassified → Water1.27%
MarineEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Marine0.63%
Sackhole BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine0.63%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine0.63%
Estuary WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water0.63%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine0.63%
EstuarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine0.63%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine0.63%
Ocean WaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Ocean Water0.63%
Polar MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Polar Marine0.63%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000115Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011EnvironmentalOpen in IMG/M
3300000137Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - sample F_10_SI03_10EnvironmentalOpen in IMG/M
3300000325Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 39 11/10/09 100mEnvironmentalOpen in IMG/M
3300001344Pelagic Microbial community sample from North Sea - COGITO 998_met_02EnvironmentalOpen in IMG/M
3300001346Pelagic Microbial community sample from North Sea - COGITO 998_met_01EnvironmentalOpen in IMG/M
3300001348Pelagic Microbial community sample from North Sea - COGITO 998_met_04EnvironmentalOpen in IMG/M
3300001352Pelagic Microbial community sample from North Sea - COGITO 998_met_07EnvironmentalOpen in IMG/M
3300001354Pelagic Microbial community sample from North Sea - COGITO 998_met_05EnvironmentalOpen in IMG/M
3300001355Pelagic Microbial community sample from North Sea - COGITO 998_met_08EnvironmentalOpen in IMG/M
3300001589Marine viral communities from the Pacific Ocean - LP-40EnvironmentalOpen in IMG/M
3300003478Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_100m_DNAEnvironmentalOpen in IMG/M
3300003583Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI073_LV_100m_DNAEnvironmentalOpen in IMG/M
3300003592Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI072_LV_10m_DNAEnvironmentalOpen in IMG/M
3300004279Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_10mEnvironmentalOpen in IMG/M
3300005078Microbial Community from Halfdan Field MHBA5EnvironmentalOpen in IMG/M
3300005086Microbial Community from Halfdan Field MHDA3EnvironmentalOpen in IMG/M
3300005239Environmental Genome Shotgun Sequencing: Ocean Microbial Populations from the Gulf of MaineEnvironmentalOpen in IMG/M
3300005838Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S2LV_130m_DNAEnvironmentalOpen in IMG/M
3300006164Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNAEnvironmentalOpen in IMG/M
3300006191Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG104-DNAEnvironmentalOpen in IMG/M
3300006399Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006621Marine coastal surface water microbial communities in Port Hacking, Sydney, Australia ? TJ07 time pointEnvironmentalOpen in IMG/M
3300006622Marine coastal surface water microbial communities in Port Hacking, Sydney, Australia ? TJ08 time pointEnvironmentalOpen in IMG/M
3300007229Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNAEnvironmentalOpen in IMG/M
3300007280Marine coastal surface water microbial communities in Port Hacking, Sydney, Australia ? TJ18 time pointEnvironmentalOpen in IMG/M
3300007551Estuarine microbial communities from the Columbia River estuary - metaG 1549B-3EnvironmentalOpen in IMG/M
3300007557Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.715EnvironmentalOpen in IMG/M
3300007637Estuarine microbial communities from the Columbia River estuary - metaG 1556A-02EnvironmentalOpen in IMG/M
3300007655Estuarine microbial communities from the Columbia River estuary - High salinity metaG S.579EnvironmentalOpen in IMG/M
3300007863Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1459B_0.2umEnvironmentalOpen in IMG/M
3300008253Methane-oxidizing microbial communities from mesocosms in the Hudson Canyon - EN1B Hudson CanyonEnvironmentalOpen in IMG/M
3300008254Methane-oxidizing microbial communities from mesocosms in the Hudson Canyon - EN4B Hudson CanyonEnvironmentalOpen in IMG/M
3300008993Marine microbial communities from eastern North Pacific Ocean - P1 free-livingEnvironmentalOpen in IMG/M
3300008999Estuarine microbial communities from the Columbia River estuary - Flood tide non-ETM metaG S.545EnvironmentalOpen in IMG/M
3300009071Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405EnvironmentalOpen in IMG/M
3300009080Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.759EnvironmentalOpen in IMG/M
3300009086Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.713EnvironmentalOpen in IMG/M
3300009436Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M MetagenomeEnvironmentalOpen in IMG/M
3300009476Pelagic marine microbial communities from North Sea - COGITO_mtgs_110407EnvironmentalOpen in IMG/M
3300009496Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524EnvironmentalOpen in IMG/M
3300009497Pelagic marine microbial communities from North Sea - COGITO_mtgs_120503EnvironmentalOpen in IMG/M
3300009498Pelagic marine microbial communities from North Sea - COGITO_mtgs_120426EnvironmentalOpen in IMG/M
3300009507Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607EnvironmentalOpen in IMG/M
3300009508Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412EnvironmentalOpen in IMG/M
3300009543Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_20Mar14_M2_3um Metatranscriptome (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009544Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean- Svalbard ARC20M MetagenomeEnvironmentalOpen in IMG/M
3300012413Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Arthur Harbor ice station, Antarctica - RNA6.ICE_1m.20151110 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012524Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_RNA1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300013010Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.8_DNAEnvironmentalOpen in IMG/M
3300014818Marine microbial communities to study oil droplet degradation from Trondheimsfjord, Norway - 0152 : 8 days incubationEnvironmentalOpen in IMG/M
3300017697Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)EnvironmentalOpen in IMG/M
3300017724Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 11 SPOT_SRF_2010-05-17EnvironmentalOpen in IMG/M
3300017749Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15EnvironmentalOpen in IMG/M
3300017770Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15 (version 2)EnvironmentalOpen in IMG/M
3300017783Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 2 SPOT_SRF_2009-07-10EnvironmentalOpen in IMG/M
3300019198Estuarine microbial communities from the Columbia River estuary - R8.48AS metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020165Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1EnvironmentalOpen in IMG/M
3300020166Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160426_1EnvironmentalOpen in IMG/M
3300020169Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160419_1EnvironmentalOpen in IMG/M
3300020185Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160517_1EnvironmentalOpen in IMG/M
3300020187Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160512_1EnvironmentalOpen in IMG/M
3300020335Marine microbial communities from Tara Oceans - TARA_B100000768 (ERX556030-ERR599035)EnvironmentalOpen in IMG/M
3300020358Marine microbial communities from Tara Oceans - TARA_B100000768 (ERX555925-ERR599009)EnvironmentalOpen in IMG/M
3300020385Marine microbial communities from Tara Oceans - TARA_B100001059 (ERX556045-ERR598965)EnvironmentalOpen in IMG/M
3300020388Marine microbial communities from Tara Oceans - TARA_B100001063 (ERX555965-ERR599064)EnvironmentalOpen in IMG/M
3300020396Marine microbial communities from Tara Oceans - TARA_B100000767 (ERX555915-ERR599122)EnvironmentalOpen in IMG/M
3300020452Marine microbial communities from Tara Oceans - TARA_B100001173 (ERX556054-ERR599078)EnvironmentalOpen in IMG/M
3300021085Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 30m 12015EnvironmentalOpen in IMG/M
3300021087Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 80m 12015EnvironmentalOpen in IMG/M
3300021389Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO127EnvironmentalOpen in IMG/M
3300021957Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18DEnvironmentalOpen in IMG/M
3300021959Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13DEnvironmentalOpen in IMG/M
3300022888 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_118_April2016_120_MGEnvironmentalOpen in IMG/M
3300022920 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_118_April2016_10_MGEnvironmentalOpen in IMG/M
3300022931 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_100_MGEnvironmentalOpen in IMG/M
3300023109 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_10_MGEnvironmentalOpen in IMG/M
3300023685Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 50R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300023699Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 81R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300023704Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 35R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024180Seawater microbial communities from Monterey Bay, California, United States - 82DEnvironmentalOpen in IMG/M
3300024192Seawater microbial communities from Monterey Bay, California, United States - 47DEnvironmentalOpen in IMG/M
3300024221Seawater microbial communities from Monterey Bay, California, United States - 80DEnvironmentalOpen in IMG/M
3300024223Seawater microbial communities from Monterey Bay, California, United States - 1DEnvironmentalOpen in IMG/M
3300024226Seawater microbial communities from Monterey Bay, California, United States - 81DEnvironmentalOpen in IMG/M
3300024230Seawater microbial communities from Monterey Bay, California, United States - 48DEnvironmentalOpen in IMG/M
3300024252 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_135_MGEnvironmentalOpen in IMG/M
3300024255 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_10_MGEnvironmentalOpen in IMG/M
3300024258 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_120_MGEnvironmentalOpen in IMG/M
3300024264 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_124_October2016_10_MGEnvironmentalOpen in IMG/M
3300024291Seawater microbial communities from Monterey Bay, California, United States - 74DEnvironmentalOpen in IMG/M
3300024293Seawater microbial communities from Monterey Bay, California, United States - 63DEnvironmentalOpen in IMG/M
3300024326Seawater microbial communities from Monterey Bay, California, United States - 64DEnvironmentalOpen in IMG/M
3300024328Seawater microbial communities from Monterey Bay, California, United States - 44DEnvironmentalOpen in IMG/M
3300024334Seawater microbial communities from Monterey Bay, California, United States - 89DEnvironmentalOpen in IMG/M
3300024336 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_124_October2016_135_MGEnvironmentalOpen in IMG/M
3300024346Whole water sample coassemblyEnvironmentalOpen in IMG/M
3300024428Seawater microbial communities from Monterey Bay, California, United States - 32DEnvironmentalOpen in IMG/M
3300025545Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_120m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025590Pelagic marine microbial communities from North Sea - COGITO_mtgs_100420 (SPAdes)EnvironmentalOpen in IMG/M
3300025636Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_90LU_22_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025637Pelagic marine microbial communities from North Sea - COGITO_mtgs_110512 (SPAdes)EnvironmentalOpen in IMG/M
3300025656Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_200m (SPAdes)EnvironmentalOpen in IMG/M
3300025663Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI072_LV_135m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025666Pelagic marine microbial communities from North Sea - COGITO_mtgs_110426 (SPAdes)EnvironmentalOpen in IMG/M
3300025667Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S4LV_100m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025676Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_100m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025688Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI073_LV_120m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025719Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI074_LV_135m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025729Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI074_LV_150m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025806Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025809Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523 (SPAdes)EnvironmentalOpen in IMG/M
3300025870Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_125m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025880Pelagic Microbial community sample from North Sea - COGITO 998_met_07 (SPAdes)EnvironmentalOpen in IMG/M
3300025890Pelagic Microbial community sample from North Sea - COGITO 998_met_08 (SPAdes)EnvironmentalOpen in IMG/M
3300025892Pelagic Microbial community sample from North Sea - COGITO 998_met_01 (SPAdes)EnvironmentalOpen in IMG/M
3300025897Pelagic Microbial community sample from North Sea - COGITO 998_met_05 (SPAdes)EnvironmentalOpen in IMG/M
3300026406Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 13R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300026421Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 20R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300026466Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 70R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300026468Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 79R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300026471Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 77R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300026500Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 54R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300026511Seawater microbial communities from Monterey Bay, California, United States - 27DEnvironmentalOpen in IMG/M
3300027077Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - C0912_C27A4_35 (SPAdes)EnvironmentalOpen in IMG/M
3300027522Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300028008Seawater microbial communities from Monterey Bay, California, United States - 1D_rEnvironmentalOpen in IMG/M
3300028134Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - WCR_12 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300028194Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_10mEnvironmentalOpen in IMG/M
3300028273Seawater microbial communities from Monterey Bay, California, United States - 51DEnvironmentalOpen in IMG/M
3300028336Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 42R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300028418Seawater microbial communities from Monterey Bay, California, United States - 16DEnvironmentalOpen in IMG/M
3300031519Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2EnvironmentalOpen in IMG/M
3300031579Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - CB21_1120_Surface (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031621Marine microbial communities from Western Arctic Ocean, Canada - AG5_SurfaceEnvironmentalOpen in IMG/M
3300031659Marine microbial communities from Ellis Fjord, Antarctic Ocean - #82EnvironmentalOpen in IMG/M
3300032073Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 3416EnvironmentalOpen in IMG/M
3300032088Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 21515EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
DelMOSum2011_1008174723300000115MarineVKSKKIKSQLNQAQADVSKSKIESEVKTHSKVIKKIDHNNFHRALEAFSDCV*
LP_F_10_SI03_10DRAFT_103761323300000137MarineVKSKKQTISQLNQVQTNVSKSKLESEVKTHSKEIKKVNHNNFHRVLEAFSDCV*
SI39nov09_100mDRAFT_102730433300000325MarineVKSKKTKSQLNHAQIDASKSKIKSEVKTHSKVIKKIN
JGI20152J14361_1011014913300001344Pelagic MarineVKSKKTKSQLNQAQVDVSKSKIESEVKAHPKVIKKIDHNNFH
JGI20151J14362_1006914333300001346Pelagic MarineVKSKKTKSQLNQAQFDASKSKIESDVKTHSKVIKKINHNNFHRALEAFSDCV*
JGI20154J14316_1007387113300001348Pelagic MarineVKSKKIKPQLNQAQIDISKSKIESEVKTHSKVIKKIDHNNFHRALEAFSDCV*
JGI20154J14316_1008669613300001348Pelagic MarineVKSKKTKSQLNQAQVDVSKSKIESEVKAHPKVIKKIDHNNFHRALEAFSDCV*
JGI20154J14316_1010143123300001348Pelagic MarineTKIVKSKKTISELNQAQVDVSKSKIESKVKAHSKVIKKIDHNNFHRALEAFSDCV*
JGI20157J14317_1011280713300001352Pelagic MarineVKSKKIKPQLNQAQIDVSKSKIESEVKTHSKVIKKIDHNNFHRALEAFSDCV*
JGI20157J14317_1013515523300001352Pelagic MarineLGQNPNNFKFPKGTKIVKSKKTISELNQAQVDVSKSKIESKVKAHSKVIKKIDHNNFHRALEAFSDCV*
JGI20155J14468_1005711713300001354Pelagic MarineVKSKKTKSQLNQAQVDVSKSKIESEVKAHSKXIKKIDHNNFHRALEAFSDCV*
JGI20155J14468_1007645833300001354Pelagic MarineVKSKKTNPQLNQAQIDASKSKIESEVKTNSKVIKKINHNNFHRALEAFSDCV*
JGI20158J14315_1008910233300001355Pelagic MarineVKSKKTNPQLNQAQIDASKPKIESEVKTHSKVIKKIN
JGI24005J15628_10003809113300001589MarineMIVKSKKTNSKLIQSQTDAPKSKLVSEVKIQSKEKAKINHNKFYRALEAFSDCV*
JGI26238J51125_103765733300003478MarineVKSKKTKSQLNHAQIDASKSKIKSEVKTHSKVIKKINHNNFHRALEAFSDCV*
JGI26253J51717_100668863300003583MarineVKSKKTKSQLNQAQVDVSKSKIEGEVKTHSKVIKKIDHNNFHRALEAFSDCV*
JGI26253J51717_101227853300003583MarineVKSKKTNPQLNQAQIDASKPKIESEVKTHSKVIKKINHNNFHRALEAFSDCV*
JGI26246J51724_100369983300003592MarineLGQNPNNFKFPKGTKIVKSKKTKSELNQAQVDVSKLKIENEVKAHSKVIKKIDHNNFHRALEAFSDCV*
Ga0066605_1028277723300004279MarineVKSKKTKSQLNQAQVDVSKSKTESEVKAHPKVIKKIDHNNFHRALEAFSDCV*
Ga0066605_1028971423300004279MarineLGQNPNNFKFPKGTKIVKSKKTKSQLNQPQVDVSKLKIESEVKAHSKVIKKIDHNNFHRALEAFSDCV*
Ga0066605_1038437313300004279MarineVKSKKIKPQLNQAQVKVSKSKIESEVKAHPKVIKKIDHNNFHRALEAFSDCV*
Ga0070770_1013696413300005078WaterVKSKKTKSQLNQAQVDVSKSKIESEVKTHSKVIKKIDHNNFHRALEAFSDCV*
Ga0072334_1091239713300005086WaterSQLNQAQVNVSKSKIESEVKAHPKVIKKIDHNNFHRALEAFSDCV*
Ga0073579_166088523300005239MarineVKSKKTNPQPSQAQTVTSKSKLETQVKTHSKEIKKINHNNFHRALEAFSDCV*
Ga0008649_1005945113300005838MarineVKSKKTKSQLNQAQVDVSKSKIEGEVKTHSKVIKKIDHNNFHR
Ga0008649_1029901323300005838MarineVKSKKTKSQLNHAQIDASKSKIQSEVKTHTKVIKKINHNNFHRALEAFSDCV*
Ga0075441_1000180883300006164MarineVKIKKTISKLKQTQTDSSKTKLESEVKIQSEEKKINHNNFHRALEAFSDCV*
Ga0075447_1012837313300006191MarineKIKKTISKLKQTQTDSSKTKLESEVKIQSEEKKINHNNFHRALEAFSDCV*
Ga0075495_160052023300006399AqueousVDVSKSKIESEVKAHSKVIKKIDHNNFHRALEAFSDCV*
Ga0101441_10782443300006621Marine Surface WaterVKSKKTKSQLNQAQVDVSKSKIESEVKAHSKVIKKIDHNNFHRALEAFSDCV*
Ga0101442_11688063300006622Marine Surface WaterVQSKKTKPQLNQEQVEVSKSKIESEVKAHSKVIKKIDHNNFHRALEAFSDCV*
Ga0075468_1002878843300007229AqueousMKSKKANPQLNQEQTEASKSKLESEVKTHSKEIKKINHNNFHRALEAFSDCV*
Ga0101452_12184673300007280Marine Surface WaterVKSKKTKSQLNQAQVDNSKTKIESEVKAHPKVIKKIDHINFHRALEAFSDCV*
Ga0102881_107291233300007551EstuarineLGQNPNNFKFPKGTKIVNSKKTKSELNQAQVDVSKSKTESEVKAHSKVIKKIDHNNFHRALEAFSDCV*
Ga0102821_114613213300007557EstuarineLGQNPNNFKFPKGTKIVKSKKTNPQLNQVQTDTSKSKLESEVKTHSKVIKKIDHNNFHRALEAFSDCV*
Ga0102906_101690413300007637EstuarineVKSKKQTISQLNQVQTNVSKSKLESEIKTHSKEIKKVNHNNFHRALEAFSDCV*
Ga0102825_105769123300007655EstuarineLGQNPNNFKFPKGTKIVKSKKTKSELNQAQVDVSKSKIQSEVNAHSKVIKKIDHNNFHRALEAFSDCV*
Ga0105744_101433643300007863Estuary WaterLGQNPNNFKFPKGTKIVKSKKTKSQLNQAQVDVSKSKIEGEVKTHSKVIKKIDHNNFHRALEAFSDCV*
Ga0105349_1029304423300008253Methane Seep MesocosmVKSKKTKSQLNQAQIDASKSKIESEVKTHSKVIKKINHNNFHRALEAFSDCV*
Ga0105351_124879423300008254Methane Seep MesocosmNVSKSKLESEVKTHSKEIKKVNRNNFHRVLEAFSDCV*
Ga0104258_103172723300008993Ocean WaterKFPKGTKIVKSKKIKSQLNQAQVDVSKSKIEGEVKTHSKVIKKIDHNNFHRALEAFSDCV
Ga0102816_117283513300008999EstuarineVNSKKTKSQLNQAQVDVSKSKIEGEVKTHSKVIKKIDHNNFHRALEAFSD
Ga0115566_1069374323300009071Pelagic MarineLGQNPNNFKFPKGTKIVKSKKTKSQLNQAQVDVSKSKIESEVKAHSKVIKKIDHNNFHRALEAFSDCV*
Ga0102815_1037093823300009080EstuarineGQNPNNFKFPKGTKIVKSKKTKSELNQAQVDVSKLKIENEVKAHSKVIKKIDHNNFHRALEAFSDCV*
Ga0102812_1010331833300009086EstuarineLGQNPNNFKFPKGTKIVKSKKTKSQLNQAQVDVSKSKIEGEVKTHAKVIKKIDHNNFHRALEAFSDCV*
Ga0115008_1158040713300009436MarineVKSKKQTISQLNQVQTNVSKSKLESEVKTHSKEIKKINHNNFHRALEAFSDC
Ga0115555_121172013300009476Pelagic MarineVKSKKTKSQLNQAQVDVSKSKIESEVKSHPKVIKKIDHNNFHRALEAFSDCV*
Ga0115570_1013817433300009496Pelagic MarineLGQNPNNFKFPKGTKIVKSKKTKSQLNQAQVDVSKSKIEGEVKTHSKVLKKIDHNNFHRALEAFSDCV*
Ga0115569_1026769023300009497Pelagic MarineVKSKKIKPQLNQAQIDVSKSKIESEVKTHSKVIKKINHNNFHRALEAFSDCV*
Ga0115568_1021968823300009498Pelagic MarineSQKEKNVQIKKTKPQLNQAQVDVSKSKIESEVKAHSKVIKKIDHNNFHRALEAFSDCV*
Ga0115572_1059781223300009507Pelagic MarineLGQNPNNFKFPKGTKIVKSKKTKPQLNQAQVDISKSKIESKVKAHSKVIKKINHNNFHRALEAFSDCV*
Ga0115567_1053143913300009508Pelagic MarineVKSKKTKSQLNQAQVDVSKSKIESEVKVHSKAIKK
Ga0115567_1087791913300009508Pelagic MarineKKPQLNQAQVDVSKSKIESKVKAHSKVIKKIDHNNFHRTLEAFSDCV*
Ga0115099_1005133723300009543MarineVYKSKIESEVKAHPKVIKKIDHNNFHRALEAFSDCV*
Ga0115006_1020140343300009544MarineMAVESKKTNSKLNQAQTDASKSKPESEVKIQSKEKAKINHNKFYRALEAFSDCV*
Ga0138258_134384113300012413Polar MarineMVVESKKTNSKLNQAQTDASKSKPESEVKIQSKEKAKINHNKFYRALEAFSDCV*
Ga0129331_145295623300012524AqueousQADVSKSKIESEVKTHSKVIKKIDHNNFHRALEAFSDCV*
Ga0129327_1092887713300013010Freshwater To Marine Saline GradientVKSKKTKYQLNQEQIDSSKSKIESEVKTHSKVIKKVNHNNFHRALEAFSDCV*
Ga0134300_103326613300014818MarineVKSKKTKSQLNQAQVDVSKSKIESEVKTHSKEIKKVIFLKLF*
Ga0180120_1013581323300017697Freshwater To Marine Saline GradientVKSKKIKSQLNQAQADVSKSKIESEVKTHSKVIKKIDHNNFHRALEAFSDCV
Ga0181388_106087023300017724SeawaterQIKKTKPQLNQAQVDVSKSKIESEVKAHSKVIKKIDHNNFHRALEAFSDCV
Ga0181392_105683033300017749SeawaterVKSKKTKSQLNQAQVDVSKSKIESEVKAHPKVIKKIDHNNFHRALE
Ga0181392_114715723300017749SeawaterVQSKKTKSQLNQAQVDVSKSKIESEVKAHSKVIKKIDHNNFHRALEAFSDCV
Ga0187217_129966823300017770SeawaterVKSKKIKSQHNQAQPDVSKSKIESEVKTHSKVIKKIDHNNFHRALEAFSDCV
Ga0181379_129556923300017783SeawaterVSKSKIESEDKAHSKVIKKIDHNNFHRALEAFSDCV
Ga0180033_10828613300019198EstuarineKIVKSKKTKSQLNQAQVDVSKSKIEGEVKTHSKVIKKIDHNNFHRALEAFSDCV
Ga0206125_1000383313300020165SeawaterLGQNPNNFKFPKGTKIVKSKKTKSQLNQAQVDVSKSKIEGEVKTHSKVIKKIDHNNFHRALEAFSDCV
Ga0206125_1011511123300020165SeawaterVKSKKTNPQLNQAQIDASKPKIESEVKTHSKVIKKINHNNFHRALEAFSDCV
Ga0206128_107666843300020166SeawaterGKKIVKSKKTKSQLNQAQFDASKSKIESDVKTHSKVIKKINHNNFHRALEAFSDCV
Ga0206127_126473313300020169SeawaterKSQLNQAQVDVSKSKIESEVKVHSKAIKKIDHNNFHRALEAFSDCV
Ga0206131_1025530623300020185SeawaterVKSKKIKPQLNQAQIDVSKSKIESEVKTHSKVIKKIDHNNFHRALEAFSDCV
Ga0206131_1026110433300020185SeawaterVKSKKTKSQLNQAQVDVSKSKIESEVKAHSKVIKKIDHNNFHRALEAFSDCV
Ga0206130_1027199423300020187SeawaterLGQNPNNFKFPKGTKIVKSKKTKSQLNQAQVDVSKSKIESEVKAHSKVIKKIDHNNFHRALEAFSDCV
Ga0206130_1036533723300020187SeawaterLGQNPNNFKFPKGTKIVKSKKTISELNQAQVDVSKSKIESKVKAHSKVIKKIDHNNFHRALEAFSDCV
Ga0211690_112975213300020335MarineKSHLNQSQIDDSKSKIESEVTTHSKVIKKINHNNFHRALEAFSDCV
Ga0211689_100935673300020358MarineMTVKVKKTNSKLSHAQAAASKSKLESEVKIQSKEKTKINHNNFHRALEAFSDCV
Ga0211677_1002413353300020385MarineVKSKKTNPQLNQAKIDASKSKIESEVKAHSKVIKKIDHNNFHRALEAFSDCV
Ga0211678_1007196443300020388MarineLGQNPNNFKFPKGTKIVKSKKTKSQLNQTHVDVSKSKIESEVKAHSKVIKKIDHNNFHRALEAFSDCV
Ga0211687_1012097823300020396MarineLKSKKQTISQLNQVQTEVTKSKLESEVKTHSKEMKKINNKNFYRALEAFSDCV
Ga0211545_1003024223300020452MarineVKSKKTNPQLNQSQTDTSKSKLQSEVKAYSKEIKKINHNNFHRALEAFSDCV
Ga0206677_1015691923300021085SeawaterVQIKKTKPQLNQAQVDVSKSKIESEVKAHSKVIKKIDHNNFHRALEAFSDCV
Ga0206683_1005381553300021087SeawaterVKSKKTKTQLNQAQVDVSKSKIEVEVKTHSKVIKKIDHNNFHRALEAFS
Ga0213868_1025710033300021389SeawaterVNNKKTKSQLNQRQIDASKSKIESEVKTHSKVIKKINHNNFHRA
Ga0222717_1013684733300021957Estuarine WaterVKSKKTKPQLNQAQINASKSKIESEVKTHSKVIKKINHNNFHRALEAFSDCV
Ga0222716_1022235023300021959Estuarine WaterVKSKKTKSQLNQAQVDVSKSKIESEVKAHPKVIKKIDHNNFHRALEAFSDCV
Ga0222716_1073831923300021959Estuarine WaterFPKGKKIVKSKKQTISQLNQVQTNVSKSKLESEIKTHSKEIKKVNHNNFHRVLEAFSDCV
(restricted) Ga0233428_112356413300022888SeawaterVKSKKTKSQLNHAQIDASKSKIKSEVKTHSKVIKKINHN
(restricted) Ga0233426_1001090453300022920SeawaterVKSKKTKSELNQAQVDVSKLKIENEVKAHSKVIKKIDHNNFHRALEAFSDCV
(restricted) Ga0233433_1022192723300022931SeawaterVKSKKTKSQLNHAQIDASKSKIKSEVKTHSKVIKKINHNNFHRALEAFSDCV
(restricted) Ga0233432_1050779013300023109SeawaterVDVSKSKTESEVKAHPKVIKKIDHNNFHRALEAFSDCV
Ga0228686_105004523300023685SeawaterDVSKSKIESEVKAHSKVIKKIEHNNFHRALEAFSDCV
Ga0228695_106103223300023699SeawaterVQNKNTKPQLNQAQVDVSKSKIESKVKAHSKVIKKIDHNNFHRALEAFSDCV
Ga0228684_104537713300023704SeawaterLNQAQVDVSKSKIESEVKAHPKVIKKIDHNNFHRALEAFSDCV
Ga0228668_104494613300024180SeawaterLGQNPNNFKFPKGTKIVKSKKTKSELNQAQVDVSKSKIESEVKAHSKVIKKIDHNNFHRALEAFSDCV
Ga0228668_106983223300024180SeawaterLGQNPKNFKFPKGKNVQNKNTKPQLNQAQVDVSKSKIESKVKAHSKVIKKIDHNNFHRALEAFSDCV
Ga0228637_105267313300024192SeawaterVKSKKTKSQLNQAQVDVSKSKIEGEVKTHSKAIKKIDHNNFHRALEAFSDCV
Ga0228666_105667613300024221SeawaterPKGKKIVKSKKTNPQLNQAQIDASKSKIESEVKTHSKVIKKIDHNNFHRALEAFSDCV
Ga0228601_104879323300024223SeawaterVKSKKTNPQLNQAQIDASKSKIESEVKTHSKVIKKIDNNNFHRALEAFSDCV
Ga0228667_108289333300024226SeawaterLGQNPNNFKFPKGTKIVKSKKTKSELNQAQVDVSKSKIESEVKAHSKVIKKIDHNNFHRALEA
Ga0228638_104854333300024230SeawaterVDVSKSKIESEVKAHSKVIKKIDHNNFHRALEAFSDCV
(restricted) Ga0233435_118864423300024252SeawaterTKSQLNRAQIDASKSKIESEVKTHSKLTKKINHNNFHRALEAFSDCV
(restricted) Ga0233438_1035725613300024255SeawaterLGQNPNNFKFPKGTKIVKSKKTKSQLNQPQVDVSKLKIESEVKAHSKVIKKIDHNNFHRALEAFSDCV
(restricted) Ga0233440_108286123300024258SeawaterLGQNPNNFKFPKGTKIVKSKKTKSELNQAQVDVSKLKIENEVKAHSKVIKKIDHNNFHRALEAFSDCV
(restricted) Ga0233444_1037084523300024264SeawaterVDASKSKIESEVKVHSKAIKKIDHNNFHRALEAFSDCV
Ga0228660_112088713300024291SeawaterSQLNQAQVDVSKSKIESEVKAHPKVIKKIDHNNFHRALEAFSDCV
Ga0228660_113010223300024291SeawaterVKSKKTKSQLNQAQVDVSKSKIESEVKAHPKVIKKIDHNNFHRALEAFSD
Ga0228651_107485223300024293SeawaterANVSKSKIESEVKAHSKEIKKIDHNNFHRALEAFSDCV
Ga0228651_113956813300024293SeawaterQAQSDVSKSKIESEVKTHSKVIKKIDHNNFHRALEAFSDCV
Ga0228652_111199513300024326SeawaterVQIKKTKPQLNQTQVDVSKSKIESEVKAHSKVIKKIDHNNFHRALEAFSDCV
Ga0228635_107174023300024328SeawaterVKSKKTNPKLNQAQIDASKSKIESEVKTHSKVIKKINHNNFHRALEAFSDCV
Ga0228635_111632323300024328SeawaterVQSKKTKPQLNQAQVNVSKSKIESEVKAHSKAIKKIDHNNFHRALEAFSDCV
Ga0228671_109418823300024334SeawaterSKSKIESKVKAHSKVIKKIDHNNFHRALEAFSDCV
(restricted) Ga0233447_120429113300024336SeawaterKKTKSQLNHAQIDASKSKIKSEVKTHSKVIKKINHNNFHRALEAFSDCV
Ga0244775_1150655423300024346EstuarineSKSKIESEVKTHSKVIKKIDHNNFHRALEAFSDCV
Ga0233396_113227123300024428SeawaterVQIKKTKPQLNQAQVDVSKSKIESEIKAHSKVIKKIDHNNFHRALEAFSDCV
Ga0209142_104070213300025545MarineLGQNPNNFKFPKGTKIVKSKKTKSELNQAQVDVSKLKIENEVKAHSKVIKKIDHNNF
Ga0209195_101635753300025590Pelagic MarineLGQNPNNFKFPKGTKIVKSKKTKSQLNQAQVDVSKSKIESEVKTHSKVIKKIDHNNFHRALEAFSDCV
Ga0209136_105969913300025636MarineFKFPKGTKIVKSKKTKSQLNQAQVDVSKSKIEGEVKTHSKVIKKIDHNNFHRALEAFSDC
Ga0209197_115846523300025637Pelagic MarineVSKSKIESEVIAHPKVIKKIDHNNFHRALEAFSDCV
Ga0209054_109133923300025656MarineSELNQAQVDVSKLKIENEVKAHSKVIKKIDHNNFHRALEAFSDCV
Ga0209775_111175113300025663MarineSKLKIENEVKAHSKVIKKIDHNNFHRALEAFSDCV
Ga0209601_107933223300025666Pelagic MarineLGQNPNNFKFPKGTKIVKSKKTKSQLNQAQVDVSKSKIESEVKAHPKVIKKIDHNNFHRALEAFSDCV
Ga0209043_102596533300025667MarineVKSKKKPQLNQAQVDVSKSKIEGEVKTHSKVIKKIDHNNFHRALEAFSDCV
Ga0209657_112505223300025676MarineVKSKKQTISQLNQVQTNVSKSKLESEVKTHSKEIKKVNHNNFHRVLEAFSDCV
Ga0209657_115379313300025676MarineQNPNNFKFPKGTKIVKSKKTKSELNQAQVDVSKLKIENEVKAHSKVIKKIDHNNFHRALEAFSDCV
Ga0209140_103237143300025688MarineKKQTISQLNQVQTNVSKSKLESEVKTHSKEIKKVNHNNFHRVLEAFSDCV
Ga0209252_102707513300025719MarineVKSKKQTISQLNQVQTNVSKSKLESEVKTHSKEIKKVNHNN
Ga0209558_118417813300025729MarineKSKKTKSQLNHAQIDASKSKIKSEVKTHSKVIKKINHNNFHRALEAFSDCV
Ga0208545_103904613300025806AqueousMKSKKANPQLNQEQTEASKSKLESEVKTHSKEIKKINHNNFHRALEAFSDCV
Ga0209199_115562523300025809Pelagic MarineKTKSQLNQAQVDVSKSKIESEVKTHSKVIKKIDHNNFHRALEAFSDCV
Ga0209666_135632813300025870MarineVKSKKIKPQLNQAQVKVSKSKIESEVKAHPKVIKKI
Ga0209534_1033950823300025880Pelagic MarineAQIDASKPKIESEVKTHSKVIKKINHNNFHRALEAFSDCV
Ga0209631_1035952813300025890Pelagic MarineMKNKKTKPQLNQAQIDASKSKIESEVKTQSKEIKKINHNNFHRALEAFSDCV
Ga0209630_1002625523300025892Pelagic MarineVKSKKTKSQLNQAQFDASKSKIESDVKTHSKVIKKINHNNFHRALEAFSDCV
Ga0209630_1033392513300025892Pelagic MarineVKSKKTNPQLSQAQIDASKSKIESKVKTNSKMIKKINNNDFHRALEAFSDCV
Ga0209425_1044725323300025897Pelagic MarineYLGQNPNNFKFPKGTKIVKSKKTKSQLNQAQVDVSKSKIEGEVKTHSKVIKKIDHNNFHRALEAFSDCV
Ga0247565_102075213300026406SeawaterKSKKTKSQLNQAQVDVSKLKIESEVKAHPKVIKKIDHNNFHRALEAFSDCV
Ga0247569_105169023300026421SeawaterDVSKSKIESEVKAHSKVIKKIDHNNFHRALEAFSDCV
Ga0247598_115456313300026466SeawaterIPKILNSQKEKNVQNKNTKPQLNQAQVDVSKSKIESKVKAHSKVIKKIDHNNFHRALEAFSDCV
Ga0247603_108578223300026468SeawaterVQSKKTKPQLNQAQVNVSKSKIESEVKAHSKVIKKIDHNNFHRALEAFSDCV
Ga0247602_107265413300026471SeawaterNPNNFKFPKGTKIVKSKKTKSELNQAQVDVSKSKIESEVKAHSKVIKKIDHNNFHRALEAFSDCV
Ga0247602_108732723300026471SeawaterDVSKSKIESKVKAHSKVIKKIDHNNFHRTLEAFSDCV
Ga0247592_111620913300026500SeawaterQLNQAQVDVSKSKIESEVKAHPKVIKKIDHNNFHRALEAFSDCV
Ga0233395_110999313300026511SeawaterHNQAQPDVSKSKIESEVKTHSKVIKKIDHNNFHRALEAFSDCV
Ga0208941_101635323300027077MarineVKSKKTNPQLNQAQIDASKSKIESEVKAHSKVIKKIDHNNFHRALEAFSDCV
Ga0209384_1000872103300027522MarineVKIKKTISKLKQTQTDSSKTKLESEVKIQSEEKKINHNNFHRALEAFSDCV
Ga0228674_115425523300028008SeawaterKTTLQLNQAQVNVSKSKTESEVKAHSKVIKKIDHNNFHRALEAFSDCV
Ga0256411_112536423300028134SeawaterQKEKNVQSKNTKPQLNQAQVDVSKSKIKSEVKAHSKVIKKIDHNNFHRALEAFSDCV
Ga0257106_110290323300028194MarineLGQNPNNFKFPKGKMIVKSKKTNSKLIQSQTDAPKSKLVSEVKIQSKEKAKINHNKFYRALEAFSDCV
Ga0228640_107361613300028273SeawaterPGKSKKTKSQLNQAQVDVSKSKIESEVKAHPKVIKKIDHNNFHRALEAFSDCV
Ga0247583_104889213300028336SeawaterQVDVSKSKIEGEVKTHSKVIKKIDHNNFHRALEAFSDCV
Ga0228615_110857313300028418SeawaterSKKTKPQQNQAEVDVSKSKIESEVKAHSKVIKKIDHNNFHRALEAFSDCV
Ga0307488_1029367723300031519Sackhole BrineMTVKSKKTSSNLNQAQTDDSKSKLESEVKIQSKQKAQINHNKFYRALEAFSDCV
Ga0308134_106088123300031579MarineKLNQAQTDASKSKPESEVKIQSKEKAKINHNKFYRALEAFSDCV
Ga0302114_1014611633300031621MarineMTVKSKKTNSKLNQAQTDASKSKPESEVKIQSKEKA
Ga0307986_1000509813300031659MarineKKTNSKLNQAQTDASKSKPESEVKIQSKEKAKINHNKFYRALEAFSDCV
Ga0315315_1099536133300032073SeawaterVKSKKTKSQLNQAQIDASKSKIESEVKTHSKVIKKINHNNFHRALEAFSDCV
Ga0315321_1071883523300032088SeawaterLNQAQVDVSKSKIESKVKAHSKVIKKIDHNNFHRALEAFSDCV

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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