Metagenome / Metatranscriptome Family F042553

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F042553
Family Type	Metagenome / Metatranscriptome
Number of Sequences	158
Average Sequence Length	59 residues
Representative Sequence	MGKLIVLIAIVGAVAFAWNKGWIAQWFNTAVDSSIDSVKSTQRSATKVRPADPGAPEAEK
Number of Associated Samples	106
Number of Associated Scaffolds	158

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	43.95 %
% of genes near scaffold ends (potentially truncated)	13.92 %
% of genes from short scaffolds (< 2000 bps)	79.11 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (87.975 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil (15.190 % of family members)
Environment Ontology (ENVO)	Unclassified (35.443 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (36.076 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 48.86% β-sheet: 0.00% Coil/Unstructured: 51.14%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 158 Family Scaffolds
PF04262	Glu_cys_ligase	37.34
PF00311	PEPcase	25.95
PF00254	FKBP_C	22.15
PF00293	NUDIX	3.80
PF00326	Peptidase_S9	1.27
PF03466	LysR_substrate	1.27
PF03401	TctC	0.63
PF06114	Peptidase_M78	0.63
PF00126	HTH_1	0.63
PF07859	Abhydrolase_3	0.63

COG ID	Name	Functional Category	% Frequency in 158 Family Scaffolds
COG2918	Gamma-glutamylcysteine synthetase	Coenzyme transport and metabolism [H]	37.34
COG2352	Phosphoenolpyruvate carboxylase	Energy production and conversion [C]	25.95
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.63
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.63

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.24 %
Unclassified	root	N/A	10.76 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.24 %
Unclassified	root	N/A	10.76 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	87.97 %
Unclassified	root	N/A	10.76 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	1.27 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	79.11 %
Unclassified	root	N/A	10.76 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	4.43 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	1.27 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.63 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	48.73 %
Unclassified	root	N/A	10.76 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	4.43 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	1.27 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.63 %

Name	Rank	Taxonomy	Distribution
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	12.66 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	10.76 %
Unclassified	root	N/A	10.76 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	4.43 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	1.27 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.63 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	0.63 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	10.76 %
Unclassified	root	N/A	10.76 %
Microgenomates group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group	4.43 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1.27 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.27 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	1.27 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.63 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	0.63 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	10.76 %
Unclassified	root	N/A	10.76 %
Candidatus Woesebacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Woesebacteria	4.43 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1.27 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	1.27 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	0.63 %
Cupriavidus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus	0.63 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.63 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	0.63 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	10.76 %
Unclassified	root	N/A	10.76 %
Candidatus Woesebacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Woesebacteria	4.43 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1.27 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	1.27 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	0.63 %
Burkholderia cepacia complex	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia cepacia complex	0.63 %
Cupriavidus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus	0.63 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	0.63 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	10.76 %
Unclassified	root	N/A	10.76 %
Candidatus Woesebacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Woesebacteria	4.43 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1.27 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	1.27 %
Burkholderia cenocepacia	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia cepacia complex → Burkholderia cenocepacia	0.63 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	0.63 %
Cupriavidus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus	0.63 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	0.63 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004463\|Ga0063356_104674014	All Organisms → cellular organisms → Bacteria → Proteobacteria	589	Open in IMG/M
3300004480\|Ga0062592_100220104	All Organisms → cellular organisms → Bacteria → Proteobacteria	1360	Open in IMG/M
3300004778\|Ga0062383_10695223	All Organisms → cellular organisms → Bacteria → Proteobacteria	519	Open in IMG/M
3300005093\|Ga0062594_100601793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	964	Open in IMG/M
3300005294\|Ga0065705_10022092	All Organisms → cellular organisms → Bacteria → Proteobacteria	2331	Open in IMG/M
3300005295\|Ga0065707_10846633	All Organisms → cellular organisms → Bacteria → Proteobacteria	578	Open in IMG/M
3300005343\|Ga0070687_100352204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	951	Open in IMG/M
3300005438\|Ga0070701_11378702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	506	Open in IMG/M
3300005543\|Ga0070672_100466993	All Organisms → cellular organisms → Bacteria → Proteobacteria	1088	Open in IMG/M
3300005543\|Ga0070672_100473813	All Organisms → cellular organisms → Bacteria	1080	Open in IMG/M
3300005546\|Ga0070696_100629614	All Organisms → cellular organisms → Bacteria → Proteobacteria	868	Open in IMG/M
3300005718\|Ga0068866_10270275	All Organisms → cellular organisms → Bacteria → Proteobacteria	1049	Open in IMG/M
3300005719\|Ga0068861_100810322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	879	Open in IMG/M
3300006169\|Ga0082029_1425036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	592	Open in IMG/M
3300006844\|Ga0075428_100044046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4905	Open in IMG/M
3300006844\|Ga0075428_100055517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4339	Open in IMG/M
3300006844\|Ga0075428_100531633	All Organisms → cellular organisms → Bacteria	1257	Open in IMG/M
3300006845\|Ga0075421_101436416	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	757	Open in IMG/M
3300006845\|Ga0075421_101454889	All Organisms → cellular organisms → Bacteria → Proteobacteria	751	Open in IMG/M
3300006845\|Ga0075421_102535432	All Organisms → cellular organisms → Bacteria → Proteobacteria	533	Open in IMG/M
3300006845\|Ga0075421_102664565	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300006846\|Ga0075430_100524250	All Organisms → cellular organisms → Bacteria → Proteobacteria	977	Open in IMG/M
3300006847\|Ga0075431_100503280	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1202	Open in IMG/M
3300006871\|Ga0075434_101548073	All Organisms → cellular organisms → Bacteria → Proteobacteria	672	Open in IMG/M
3300006876\|Ga0079217_10204153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1013	Open in IMG/M
3300006876\|Ga0079217_10746253	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Woesebacteria	668	Open in IMG/M
3300006894\|Ga0079215_10158605	All Organisms → cellular organisms → Bacteria → Proteobacteria	1091	Open in IMG/M
3300006894\|Ga0079215_10332482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	858	Open in IMG/M
3300006894\|Ga0079215_10714153	All Organisms → cellular organisms → Bacteria → Proteobacteria	681	Open in IMG/M
3300006894\|Ga0079215_11469063	All Organisms → cellular organisms → Bacteria → Proteobacteria	536	Open in IMG/M
3300006918\|Ga0079216_10034804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2054	Open in IMG/M
3300006918\|Ga0079216_10446200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	832	Open in IMG/M
3300006918\|Ga0079216_10838878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	682	Open in IMG/M
3300007004\|Ga0079218_10056540	All Organisms → cellular organisms → Bacteria → Proteobacteria	2471	Open in IMG/M
3300007004\|Ga0079218_10067681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia cepacia complex → Burkholderia cenocepacia	2307	Open in IMG/M
3300007004\|Ga0079218_10672927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	964	Open in IMG/M
3300007004\|Ga0079218_11110124	All Organisms → cellular organisms → Bacteria → Proteobacteria	808	Open in IMG/M
3300009100\|Ga0075418_11453432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	744	Open in IMG/M
3300009147\|Ga0114129_10241706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2427	Open in IMG/M
3300009156\|Ga0111538_12470893	All Organisms → cellular organisms → Bacteria → Proteobacteria	652	Open in IMG/M
3300009156\|Ga0111538_12538457	All Organisms → cellular organisms → Bacteria → Proteobacteria	643	Open in IMG/M
3300009444\|Ga0114945_10035781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2682	Open in IMG/M
3300009444\|Ga0114945_10303612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	940	Open in IMG/M
3300009609\|Ga0105347_1012865	All Organisms → cellular organisms → Bacteria → Proteobacteria	2866	Open in IMG/M
3300009789\|Ga0126307_10361725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1169	Open in IMG/M
3300010045\|Ga0126311_10942602	Not Available	703	Open in IMG/M
3300010399\|Ga0134127_10341553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1459	Open in IMG/M
3300010399\|Ga0134127_11096126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	860	Open in IMG/M
3300011402\|Ga0137356_1048570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	797	Open in IMG/M
3300011402\|Ga0137356_1065766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	687	Open in IMG/M
3300011402\|Ga0137356_1077196	All Organisms → cellular organisms → Bacteria → Proteobacteria	634	Open in IMG/M
3300011403\|Ga0137313_1004322	Not Available	2611	Open in IMG/M
3300011409\|Ga0137323_1000557	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	10462	Open in IMG/M
3300011415\|Ga0137325_1018809	All Organisms → cellular organisms → Bacteria → Proteobacteria	1370	Open in IMG/M
3300011416\|Ga0137422_1111693	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	654	Open in IMG/M
3300011420\|Ga0137314_1060910	Not Available	915	Open in IMG/M
3300011429\|Ga0137455_1149600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	696	Open in IMG/M
3300011434\|Ga0137464_1195071	All Organisms → cellular organisms → Bacteria → Proteobacteria	616	Open in IMG/M
3300011437\|Ga0137429_1038327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1388	Open in IMG/M
3300011438\|Ga0137451_1063889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1089	Open in IMG/M
3300011445\|Ga0137427_10126076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1044	Open in IMG/M
3300011993\|Ga0120182_1003873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	863	Open in IMG/M
3300012041\|Ga0137430_1135982	All Organisms → cellular organisms → Bacteria → Proteobacteria	704	Open in IMG/M
3300012140\|Ga0137351_1006878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1336	Open in IMG/M
3300012172\|Ga0137320_1123961	Not Available	549	Open in IMG/M
3300012173\|Ga0137327_1129011	All Organisms → cellular organisms → Bacteria → Proteobacteria	557	Open in IMG/M
3300012893\|Ga0157284_10203359	All Organisms → cellular organisms → Eukaryota → Opisthokonta	598	Open in IMG/M
3300014868\|Ga0180088_1018173	Not Available	1087	Open in IMG/M
3300014872\|Ga0180087_1051244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	776	Open in IMG/M
3300014876\|Ga0180064_1017362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1389	Open in IMG/M
3300014884\|Ga0180104_1000248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	11299	Open in IMG/M
3300014965\|Ga0120193_10007768	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300015371\|Ga0132258_10628219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2699	Open in IMG/M
3300018422\|Ga0190265_10007325	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	7985	Open in IMG/M
3300018422\|Ga0190265_10034986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	4222	Open in IMG/M
3300018422\|Ga0190265_10105285	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2656	Open in IMG/M
3300018422\|Ga0190265_10772953	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1083	Open in IMG/M
3300018429\|Ga0190272_11049622	All Organisms → cellular organisms → Bacteria → Proteobacteria	784	Open in IMG/M
3300018432\|Ga0190275_11648817	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Woesebacteria	719	Open in IMG/M
3300018465\|Ga0190269_10122573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1306	Open in IMG/M
3300018469\|Ga0190270_10758655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	971	Open in IMG/M
3300018469\|Ga0190270_10869723	Not Available	916	Open in IMG/M
3300018481\|Ga0190271_10209755	All Organisms → cellular organisms → Bacteria → Proteobacteria	1948	Open in IMG/M
3300019377\|Ga0190264_10884955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	695	Open in IMG/M
3300019377\|Ga0190264_11451036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	592	Open in IMG/M
3300019377\|Ga0190264_11848524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	546	Open in IMG/M
3300019458\|Ga0187892_10004809	All Organisms → cellular organisms → Bacteria → Proteobacteria	22136	Open in IMG/M
3300020060\|Ga0193717_1014100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3666	Open in IMG/M
3300020063\|Ga0180118_1299115	All Organisms → cellular organisms → Bacteria → Proteobacteria	609	Open in IMG/M
3300020146\|Ga0196977_1112929	Not Available	626	Open in IMG/M
3300020202\|Ga0196964_10092371	All Organisms → cellular organisms → Bacteria → Proteobacteria	1323	Open in IMG/M
3300020202\|Ga0196964_10102217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1262	Open in IMG/M
3300020202\|Ga0196964_10141145	All Organisms → cellular organisms → Bacteria → Proteobacteria	1086	Open in IMG/M
3300020202\|Ga0196964_10244834	All Organisms → cellular organisms → Bacteria → Proteobacteria	839	Open in IMG/M
3300020215\|Ga0196963_10047927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1785	Open in IMG/M
3300020215\|Ga0196963_10069392	Not Available	1471	Open in IMG/M
3300021061\|Ga0196973_1047857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	813	Open in IMG/M
3300021066\|Ga0196980_1083722	Not Available	556	Open in IMG/M
3300025167\|Ga0209642_10042060	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2653	Open in IMG/M
3300025917\|Ga0207660_10129382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1920	Open in IMG/M
3300025918\|Ga0207662_10605665	All Organisms → cellular organisms → Bacteria → Proteobacteria	762	Open in IMG/M
3300026075\|Ga0207708_10575790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	952	Open in IMG/M
3300027360\|Ga0209969_1009607	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1380	Open in IMG/M
3300027360\|Ga0209969_1030618	All Organisms → cellular organisms → Bacteria → Proteobacteria	822	Open in IMG/M
3300027364\|Ga0209967_1016062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1074	Open in IMG/M
3300027364\|Ga0209967_1039116	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	719	Open in IMG/M
3300027364\|Ga0209967_1044900	All Organisms → cellular organisms → Bacteria → Proteobacteria	675	Open in IMG/M
3300027384\|Ga0209854_1015570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1210	Open in IMG/M
3300027471\|Ga0209995_1008322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1672	Open in IMG/M
3300027513\|Ga0208685_1011844	All Organisms → cellular organisms → Bacteria → Proteobacteria	2094	Open in IMG/M
3300027533\|Ga0208185_1000211	All Organisms → cellular organisms → Bacteria → Proteobacteria	35639	Open in IMG/M
3300027543\|Ga0209999_1056527	All Organisms → cellular organisms → Bacteria → Proteobacteria	744	Open in IMG/M
3300027639\|Ga0209387_1092810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	729	Open in IMG/M
3300027639\|Ga0209387_1217325	All Organisms → cellular organisms → Bacteria → Proteobacteria	532	Open in IMG/M
3300027691\|Ga0209485_1339891	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Woesebacteria	506	Open in IMG/M
3300027695\|Ga0209966_1003319	Not Available	2705	Open in IMG/M
3300027876\|Ga0209974_10067107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1220	Open in IMG/M
3300027880\|Ga0209481_10004193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	6050	Open in IMG/M
3300027880\|Ga0209481_10039377	All Organisms → cellular organisms → Eukaryota → Opisthokonta	2166	Open in IMG/M
3300027880\|Ga0209481_10642992	Not Available	550	Open in IMG/M
3300027886\|Ga0209486_10017972	Not Available	3265	Open in IMG/M
3300027886\|Ga0209486_10248660	Not Available	1027	Open in IMG/M
3300027907\|Ga0207428_10010347	All Organisms → cellular organisms → Bacteria → Proteobacteria	8339	Open in IMG/M
3300027907\|Ga0207428_10401670	All Organisms → cellular organisms → Bacteria → Proteobacteria	1003	Open in IMG/M
3300027909\|Ga0209382_11628365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	637	Open in IMG/M
3300027909\|Ga0209382_11930308	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Woesebacteria	569	Open in IMG/M
3300028587\|Ga0247828_10093679	Not Available	1408	Open in IMG/M
3300028587\|Ga0247828_10285910	All Organisms → cellular organisms → Bacteria → Proteobacteria	903	Open in IMG/M
3300028592\|Ga0247822_10104327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	2046	Open in IMG/M
3300028809\|Ga0247824_10400621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	792	Open in IMG/M
3300028812\|Ga0247825_10258348	All Organisms → cellular organisms → Bacteria	1212	Open in IMG/M
3300028812\|Ga0247825_11017927	Not Available	602	Open in IMG/M
3300031226\|Ga0307497_10620605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	549	Open in IMG/M
3300031548\|Ga0307408_100101764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2190	Open in IMG/M
3300031548\|Ga0307408_100540944	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1026	Open in IMG/M
3300031548\|Ga0307408_100824434	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300031548\|Ga0307408_100893070	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus	813	Open in IMG/M
3300031548\|Ga0307408_101690392	All Organisms → cellular organisms → Bacteria → Proteobacteria	603	Open in IMG/M
3300031576\|Ga0247727_10000050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	241918	Open in IMG/M
3300031731\|Ga0307405_11694121	All Organisms → cellular organisms → Bacteria → Proteobacteria	560	Open in IMG/M
3300031740\|Ga0307468_100697326	All Organisms → cellular organisms → Bacteria → Proteobacteria	848	Open in IMG/M
3300031852\|Ga0307410_10567947	All Organisms → cellular organisms → Bacteria → Proteobacteria	942	Open in IMG/M
3300031852\|Ga0307410_10691058	Not Available	859	Open in IMG/M
3300031852\|Ga0307410_10846328	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Woesebacteria	781	Open in IMG/M
3300031901\|Ga0307406_10301693	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1231	Open in IMG/M
3300031911\|Ga0307412_10792141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	822	Open in IMG/M
3300032004\|Ga0307414_12178652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	518	Open in IMG/M
3300032144\|Ga0315910_10112439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2005	Open in IMG/M
3300032144\|Ga0315910_10124584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1904	Open in IMG/M
3300032144\|Ga0315910_10519079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	920	Open in IMG/M
3300032144\|Ga0315910_11517123	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Woesebacteria	523	Open in IMG/M
3300032157\|Ga0315912_10035196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4017	Open in IMG/M
3300033551\|Ga0247830_10081020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2233	Open in IMG/M
3300033551\|Ga0247830_11152579	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Woesebacteria	619	Open in IMG/M
3300034147\|Ga0364925_0090964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1075	Open in IMG/M
3300034148\|Ga0364927_0052951	All Organisms → cellular organisms → Bacteria → Proteobacteria	1064	Open in IMG/M
3300034668\|Ga0314793_145558	All Organisms → cellular organisms → Bacteria → Proteobacteria	532	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	68.99%
Host-Associated	Host-Associated	31.01%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	51.27%
Plants	Host-Associated → Plants	31.01%
Aquatic	Environmental → Aquatic	17.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	48.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere	22.78%
Sediment	Environmental → Aquatic → Sediment	15.19%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.23%
Freshwater	Environmental → Aquatic → Freshwater	1.27%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.27%
Cave	Environmental → Terrestrial → Cave	1.27%
Floodplain	Environmental → Terrestrial → Floodplain	1.27%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	21.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	15.19%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.59%
Sand	Environmental → Terrestrial → Soil → Sand	6.33%
Loam	Environmental → Terrestrial → Soil → Loam	4.43%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.27%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	1.27%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.27%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.27%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.63%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	21.52%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.99%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	15.19%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	12.66%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.59%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.70%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	5.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.80%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	1.27%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	1.27%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.27%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.63%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.63%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.63%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.63%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	15.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.29%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	13.29%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	11.39%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	8.23%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	6.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.70%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	5.70%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.90%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	1.27%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.27%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.27%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	1.27%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.27%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.27%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.27%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.27%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.63%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.63%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.63%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.63%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.63%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.63%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.63%
Bio-Ooze	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze	0.63%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.63%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.63%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009444	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP3	Environmental	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011402	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT830_2	Environmental	Open in IMG/M
3300011403	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT166_2	Environmental	Open in IMG/M
3300011409	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT423_2	Environmental	Open in IMG/M
3300011415	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT469_2	Environmental	Open in IMG/M
3300011416	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT551_2	Environmental	Open in IMG/M
3300011420	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT199_2	Environmental	Open in IMG/M
3300011429	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT600_2	Environmental	Open in IMG/M
3300011434	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT814_2	Environmental	Open in IMG/M
3300011437	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT736_2	Environmental	Open in IMG/M
3300011438	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT500_2	Environmental	Open in IMG/M
3300011445	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2	Environmental	Open in IMG/M
3300011993	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C1.rep1	Environmental	Open in IMG/M
3300012041	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT754_2	Environmental	Open in IMG/M
3300012140	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT690_2	Environmental	Open in IMG/M
3300012172	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT366_2	Environmental	Open in IMG/M
3300012173	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT517_2	Environmental	Open in IMG/M
3300012893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1	Environmental	Open in IMG/M
3300014868	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT830_16_10D	Environmental	Open in IMG/M
3300014872	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT790_16_10D	Environmental	Open in IMG/M
3300014876	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200_16_10D	Environmental	Open in IMG/M
3300014884	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_1Da	Environmental	Open in IMG/M
3300014965	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T2	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019458	Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaG	Environmental	Open in IMG/M
3300020060	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c2	Environmental	Open in IMG/M
3300020063	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT730_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020146	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_10-13C	Environmental	Open in IMG/M
3300020202	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_10	Environmental	Open in IMG/M
3300020215	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_5	Environmental	Open in IMG/M
3300021061	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_5-13C	Environmental	Open in IMG/M
3300021066	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3_10-13C	Environmental	Open in IMG/M
3300025167	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 19_2 (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027360	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 PM (SPAdes)	Host-Associated	Open in IMG/M
3300027364	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co AM (SPAdes)	Host-Associated	Open in IMG/M
3300027384	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027471	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 AM (SPAdes)	Host-Associated	Open in IMG/M
3300027513	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890 (SPAdes)	Environmental	Open in IMG/M
3300027533	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700 (SPAdes)	Environmental	Open in IMG/M
3300027543	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes)	Host-Associated	Open in IMG/M
3300027639	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control (SPAdes)	Environmental	Open in IMG/M
3300027691	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 (SPAdes)	Environmental	Open in IMG/M
3300027695	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes)	Host-Associated	Open in IMG/M
3300027876	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031576	Biofilm microbial communities from Wishing Well Cave, Virginia, United States - WW16-25	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M
3300034148	Sediment microbial communities from East River floodplain, Colorado, United States - 18_j17	Environmental	Open in IMG/M
3300034668	Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0063356_1046740142	3300004463	Arabidopsis Thaliana Rhizosphere	MGKLIIALAILGAVAFAWNQGWIAHWVNTAVDSGMDSVKGTQRKATTVRPADPGAPEADKK*
Ga0062592_1002201042	3300004480	Soil	MGKLIVLVAIVAALAFAWQKGWIAQWFNSAVDTSIDSVKSTQRAATKVRPADPGAPEAEKK*
Ga0062383_106952232	3300004778	Wetland Sediment	VGKLIVVIAIVGAVAFAWNKGWIAQWFDTALDSSIDSVKSTQRQATTVRPADPGAPEADKK*
Ga0062594_1006017932	3300005093	Soil	MVVVIIVGALAYAWHAGWIAQWFNSALDSGIEGVRGTQRKATTVRSADPGAEQKQ*
Ga0065705_100220922	3300005294	Switchgrass Rhizosphere	MGKLMVVVIIVGALAYAWHAGWIAQWFNSALDSGIEGVRGTQRKATTVRSADPGAEQKQ*
Ga0065707_108466332	3300005295	Switchgrass Rhizosphere	MGKLIVVIVILGAVAFAWNKGWIAQWFNTALDSSMDSVKSTQRQATTVRPVDPVAPDADKK*
Ga0070687_1003522042	3300005343	Switchgrass Rhizosphere	MARLIVVILIVGAVAYAWQAGWIAQLFNSALDNSMDAVRGTQRKATTVHPADPAPEQKQ*
Ga0070701_113787022	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MGKLIIVVVIIAAAVYAWQQGWIAQWFNSAVDSSVDSVKRTQRDATKVRQDDPAGTAEKK
Ga0070672_1004669932	3300005543	Miscanthus Rhizosphere	MVVVIIVGALAYAWHAGWIAQWFNIAVDSGIEGVRGTQRKATTVRSADPGAEQKQ*
Ga0070672_1004738131	3300005543	Miscanthus Rhizosphere	MGKLIVVIAIVGAVAFAWNQGWIAQWFNSALDSSMDSVKSTQRQATTVRPVDPVAPDADKK*
Ga0070696_1006296142	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	KLMVVVIIVGALAYAWHAGWIAQWFNSALDSGIEGVRGTQRKATTVRSADPGAEQKQ*
Ga0068866_102702752	3300005718	Miscanthus Rhizosphere	VRQLIVVVLVVGAIAYAWHAGWIAQWFNTALDSSIDSVRSTQRQATTVRPADPGAPESDKK*
Ga0068861_1008103222	3300005719	Switchgrass Rhizosphere	MGKLIVGIAIVGAVAFAWNQGWIAQWFNSALDSSMDSVKSTQRQATTVRPADPVAPESEKK*
Ga0082029_14250362	3300006169	Termite Nest	MGRFIVFLVVVGAVMYAWNKGWITQWFTNTVDSSIQSVRSTQRDARTVHPADPAEDKK*
Ga0075428_1000440465	3300006844	Populus Rhizosphere	MGRLIVVIVIIGAVAYAWNKGWIAHWFDSAVDSGIEGVRGTQRKATTVRPADPGAPEAEKK*
Ga0075428_1000555172	3300006844	Populus Rhizosphere	MGRFIVFLVVVGAVIYAWNKGWIAQWFSNAVDSGIESVRGTQRDARTVRPVDPGEEKK*
Ga0075428_1005316333	3300006844	Populus Rhizosphere	MGRLVVVVLIVGAVAYAWHAGWIARWFNSAVDSGIEGVRGTQRKATTVRPADPGAPEAEKK*
Ga0075421_1014364162	3300006845	Populus Rhizosphere	MGRLIVVIVIIGAVAYAWNKGWIAHWFNSALDSGVEGVRGTQRKATTVRPADPGAPEAEKK*
Ga0075421_1014548891	3300006845	Populus Rhizosphere	MGRLVVVVLIVGAVAYAWQAGWIARWFNSAVDSGIEGVRGTQRKATTVRPADPGAPEAEK
Ga0075421_1025354322	3300006845	Populus Rhizosphere	MGRLVVVVLIVGAVAYAWQAGWIAQWFNSAVDSGIEGVRGTQRKATTVRPADPGAPEAEKK*
Ga0075421_1026645652	3300006845	Populus Rhizosphere	MGRLIVVIVIVGAVAYAWNKGWIAQWFNSALDSSIDGVRSTQRQATKVRPADPGAPEAEKK*
Ga0075430_1005242502	3300006846	Populus Rhizosphere	MGRLIVVIVIIGAVAYAWNKGWIAHWFNSAVDSGIEGVRGTQRKATTVRPADPGAPEAEKK*
Ga0075431_1005032802	3300006847	Populus Rhizosphere	MGRLIVVIVIVGAVAYAWNKGWIAHWFNSAVDSGIEGVRGTQRKATTVRPADPGAPEAEKK*
Ga0075434_1015480732	3300006871	Populus Rhizosphere	MLGKLIVVIAIIGAVAFAWNKGWIAQWFNSALDSGMDGVKSTQRQATTVRPADPVAPEADKK*
Ga0079217_102041532	3300006876	Agricultural Soil	MGKLIVFIAIVAAVAYAWHKGYLGQWFNKAVDSSVEGVRSTQRDATKVRPADPPPEEKK*
Ga0079217_107462532	3300006876	Agricultural Soil	MGKLIVAIAILGAVAFAWNKGWIAHWVNSAVDSGMDSVKGTQRKATTVRPADPGAPETDKK*
Ga0079215_101586053	3300006894	Agricultural Soil	MGKLIVAIAILGAVAFAWNKGWIAHWVNTAVDSGMDGVKGTQRKATSVRPADPGAPEADRK*
Ga0079215_103324822	3300006894	Agricultural Soil	MGKLIVVVVVIAAAVYAWQQGWIAQWFNTAVDSSVDSVKRTQREATKVRQDDPAAPAEKK
Ga0079215_107141532	3300006894	Agricultural Soil	MGKLIVVILIVGAVVFAWNKGWIAQWFNTAVDSSMDSVKSTQRKATTVRPADPVVEADKK
Ga0079215_114690632	3300006894	Agricultural Soil	SMGKLIVAIAILGAVAFAWNKGWIAHWVNSAVDSGMDSVKGTQRKATTVRPADPGAPETDKK*
Ga0079216_100348042	3300006918	Agricultural Soil	MGKLIVFIAIVAGVAYAWHKGYLGQWFNKAVDSSIEGVRSTQRDATKVRPADPPPAEKK*
Ga0079216_104462002	3300006918	Agricultural Soil	MGRFIVFLVVVGAVIYAWNKGWIAQWFTNAVDSSIESVRGTQRDARTVRPADPAEEKK*
Ga0079216_108388782	3300006918	Agricultural Soil	MGKLIVAIAILGAVAFAWNKGWIAHWVNSAVDSGMDSVKGTQRKATTVRPADPGAPEADKK*
Ga0079218_100565402	3300007004	Agricultural Soil	MGKLIVFIAIVAGVAYAWHKGYLGQWFNKAVDSSVEGVRSTQRDATKVRPADPPPEEKK*
Ga0079218_100676811	3300007004	Agricultural Soil	SMGKLIVAIAILGAVAFAWNKGWIAHWVNSAVDSGMDSVKGTQRKATTVRPADPGAPEADKK*
Ga0079218_106729272	3300007004	Agricultural Soil	VGKLIVALAILGAVAFAWNKGWIAHWVNTAVDSGMDSVKGTQRKATTVRPADPGAPEADKK*
Ga0079218_111101242	3300007004	Agricultural Soil	MGRFIVLVVVVAAVVYAWNKGWITQWFTSTVDSGIESVRSTQRDARTPRSADPAAEKK*
Ga0075418_114534322	3300009100	Populus Rhizosphere	MGRLMVVVIIVGALAYAWHAGWIAQWFNSALDSGIEGVRGTQRKATTVRSADPGAEQKQ*
Ga0114129_102417062	3300009147	Populus Rhizosphere	MGRFIVLLVVVGAVIYAWNKGWIAQWFTNAVDSGIESVRGTQRDARTVRPVDPGEEKK*
Ga0111538_124708932	3300009156	Populus Rhizosphere	MGKLIVLVAIVAALAFAWQKGWIAQWFNSAVDTSIDSVKSTQRAATKVRPADPGAPEPEKK*
Ga0111538_125384572	3300009156	Populus Rhizosphere	MGKLIVVIAIVGAVAFAWNKGWIAQWFNSALDSSMDSVKSTQRQATTVRPADPVAPESEKK*
Ga0114945_100357812	3300009444	Thermal Springs	MGKLIVVIVIVGAVVFAWHKGWIAEWFGAAVDSGIEGVKRTQRDATKVRPIDGAPQEKK*
Ga0114945_103036122	3300009444	Thermal Springs	MGKLLVVIAIVAAVAFAWHKGWIAEWFGAAVDSGIEGVKRTQRDATKVRPIDGASQEKK*
Ga0105347_10128653	3300009609	Soil	MGKLLVVIAIIAAVAYAWHQGWIQRWIGSAVDSGIENTRRIQRDATKVRPADPGAPEQEKK*
Ga0126307_103617252	3300009789	Serpentine Soil	MGKLIVVIAIVGAVVFAWNKGWIAHWFNTAVDSSMDSVKSTQRKATTVRPADPVVEADKK
Ga0126311_109426021	3300010045	Serpentine Soil	MAKLIVVIVIVGAVAVAWNKGWIAQWFNSAVDSSIDGVKSTQRQATKVRPADPGLPEPDTK*
Ga0134127_103415532	3300010399	Terrestrial Soil	MGKLMVVVIIVGALAYAWHEGWIAQWFNSALDSGIDGVLGTQRKATTVRSADPGAEQKP*
Ga0134127_110961262	3300010399	Terrestrial Soil	MGKLIVLVAIVAAVAFAWHKGWIAQWFNSAVDTSIDSVKSTQRAATKVRPADPGAPEPEKK*
Ga0137356_10485702	3300011402	Soil	MGKLIVVIAIVAAVAFAWHKGWIAQWFDTAVDTSIDSVKRTQRQATKVRPADPGAPEEKK
Ga0137356_10657662	3300011402	Soil	MAKLLVVIAIIAAVAYAWHQGWIQRWIGSAVDSGIENTRRIQRDATKVRPADPGAPEQEKK*
Ga0137356_10771962	3300011402	Soil	MGKLLVVIAIIAAVAFAWHKGWIAEWFGSAVDSGIENTRRIQRDATKVRPADPGAPEQEKK*
Ga0137313_10043223	3300011403	Soil	MGKLLVVIAIIAAVAYAWHQGWIQRWIGSAVDSGIENTRRIQREATKVRPADPGAPEQEKK*
Ga0137323_10005577	3300011409	Soil	MGKLIVVIVIVGAVAFAWHKGWIAQWFNTAVDSSIDSVKSTQRSATKVRPIDGAAPEADKK*
Ga0137325_10188093	3300011415	Soil	MGKLLVVIAIVAAVAYAWHQGWIQRWIGSAVDSGIENTRRIQREATKVRPADPGAPEQEKK*
Ga0137422_11116932	3300011416	Soil	MGKVIVVIAIVAAVAFAWHKGWIAQWFDTAVDTSIDSVKRTQRQATKVRPADPGAPEEKK
Ga0137314_10609102	3300011420	Soil	MGKLLVVIAIIAAVAYAWHQGWIQRWIGSAVDSGIENTRRIQRDATKVRPADPGAPEQEQK*
Ga0137455_11496002	3300011429	Soil	MGKLIVVVLIVGAIAYAWQAGWIAQWFNSAVDSSIDSVNSTRRQATTLRPADPGAPEPDKK*
Ga0137464_11950712	3300011434	Soil	MIVATAIVAAVAFAWHKGWIQEWTGSAVDTGIDSVKRTQRDATKSREADPGAPQDKK*
Ga0137429_10383273	3300011437	Soil	MGKLLVVIAIVAAVAYAWHQGWIQRWIGSAVDSGIENTRRIQRDATKVRPADPGAPEQEKK*
Ga0137451_10638893	3300011438	Soil	MGKLLVVIAIVAAVAFAWHKGWIAEWLGSAVDSGIENTRRIQRDATKVRPADPGAPEEKK
Ga0137427_101260762	3300011445	Soil	MIVAIAIVAAAAFAWHKGWIQEWTGSAVDTGIDSVKRTQRDATKSREADPGAPQDKK*
Ga0120182_10038732	3300011993	Terrestrial	MGRFIVLLVVVGAVIYAWNKGWIAQWFTNTVDSGIESVRGTQRDARTVRPVDPGEEKK*
Ga0137430_11359821	3300012041	Soil	MIVALAIVAAVAFAWHKGWIQEWTGSAVDTGIDSVKRTQRDATKSREADPGAPQDKK*
Ga0137351_10068782	3300012140	Soil	MGKLLVVIAIIAAVAYAWHQGWIQRWIGSAVDSGIENTRRIQRDATKMRPADPGAPEQEKK*
Ga0137320_11239611	3300012172	Soil	KLLVVIAIIAAVAYAWHQGWIQRWIGSAVDSGIENTRRIQRDATKVRPADPGAPEQEKK*
Ga0137327_11290112	3300012173	Soil	MGKLLVVIAIIAAVAFAWHKGWIAEWFGSAVDSGIENTRRIQRDATKVRPADPGAPEEKK
Ga0157284_102033591	3300012893	Soil	MGKLIVVIAIVGAVAFAWNQGWIAQWFNSALDNSMDAVRGTQRKATTVHPADPAPEQKQ*
Ga0180088_10181733	3300014868	Soil	MGKLLVVIAIVAAVAYAWHQSWIQRWIGSAVDSGIENTRRIQRDATKVRPADPGAPEQEKK*
Ga0180087_10512442	3300014872	Soil	MGKLLVVIAIIAAVAYAWHQGWIQRWIGSAVDSGIENTRRIQRDATKVRPADPGAPEEKK
Ga0180064_10173622	3300014876	Soil	MGKLLVVIAIVAAVAFAWHKGWIAEWLGSAVDSGIENTRRIQRDATKVRPADPGAPEQEKK*
Ga0180104_100024810	3300014884	Soil	MGKLIVVIAIVAAVAFAWHKGWIAQWFDTAVDTSIDSVKRTQRQATKLRPADPGAPEEKK
Ga0120193_100077682	3300014965	Terrestrial	MGKLITVIVIVGAVAFAWHKGWIAQWFNTAVDSSIDSVRSTQREATKVRPADAPEEKK*
Ga0132258_106282192	3300015371	Arabidopsis Rhizosphere	MGKLIVVIAIVGAVAFAWNQGWIAQWFNSALDSSMDSVKSTQRQATTVRPADPVAPESEKK*
Ga0190265_100073253	3300018422	Soil	MGKLIVVVAILGAVAFAWNKGWIAHWVNSAVDSGMDSVKGTQRKATTVRPADPVPEANKK
Ga0190265_100349864	3300018422	Soil	MGKLLVVIAIIGGIAFAWHKGWVAQWFNTAVDSGIEATRDTQRAATKLRPADPVEEKK
Ga0190265_101052853	3300018422	Soil	MGKLIVVVVIVAAVAYAWQQGWIAEWFNTAVDSSIDSVKRTQRDATKVRQDDPAAPAEKK
Ga0190265_107729532	3300018422	Soil	MGKLIVVIAILAAVAFAWNKGWIAHWVNTAVDSGMDSVKGTQRKATMVRPADPGAPEADK
Ga0190272_110496221	3300018429	Soil	ATMGKLTVVILIVGAVVFAWNKGWIAQWFNTAVDSSMDSVKSTQRKATTLRPADPVPETDKK
Ga0190275_116488172	3300018432	Soil	MGKLIVVILIVGAVVFAWNKGWIAQWFNTAVDSSMDSVKSTQRKATTLRPADPVPETDKK
Ga0190269_101225732	3300018465	Soil	MGKLIVVIVIIGAVAFAWNKGWIAQWFNTAVDSSIDSVKSTQRQATTVRPADPGASEADKKK
Ga0190270_107586553	3300018469	Soil	MGKLIVVIAIVGAVVFAWNKGWIAQWFNTAVDSSMDSVKSTQRKATTLRPADPVTEAEKK
Ga0190270_108697232	3300018469	Soil	MGKLLVVIALIGGIAFAWHKGWIAQWFNTAVDSSIEATRNTQRAATKLRPADPVEEKK
Ga0190271_102097551	3300018481	Soil	MGKLIVVIAIVGAVVFAWNKGWIAQWFNTAVDSSMDAVKGTQRKATTVRPADPVVEADKK
Ga0190264_108849552	3300019377	Soil	MGKLIVVVVIVAAVAYAWQQGWIAQWFNTAVDSSVDSVKRTQRDATKMRQDDPAAPAEKK
Ga0190264_114510362	3300019377	Soil	MGKLIVVILIVGAVVFAWNKGWIAQWFNTAVDSSMDSVKSTQRKATTVRPADPAPEAEKK
Ga0190264_118485242	3300019377	Soil	MGKLIVVIAIVGAVVFAWNKGWIAQWFNTAVDTSIDSVKSTQRKATTLRPADPVVEGDKK
Ga0187892_1000480928	3300019458	Bio-Ooze	MGKLIVFIAVVGAIAFAWHKGWISEWLGAAVDSGAKSVRETQRSATKVRPADPGAPEAEK
Ga0193717_10141002	3300020060	Soil	MGKLIVVVAIVAAIAFAWQKGWIAQWFDTALDSSIDSVKRTQRDATRRSADPGAAEEKK
Ga0180118_12991152	3300020063	Groundwater Sediment	VIAIVAAVAFAWHKGWIAQWFDTAVDTSIDSVKRTQRQATKVRPADPGAPEEKK
Ga0196977_11129292	3300020146	Soil	MGKLIVLVAIVGAVVFAWNKGWIAQWFNTAVDSSIDSVRSTQRSATKVRPADPGAPEAEK
Ga0196964_100923712	3300020202	Soil	MGRLIVLILVVGAVWYAWQKGLIAQWFNTAVDSSVEGAKRTQRDATKVRPADAPEDKK
Ga0196964_101022172	3300020202	Soil	MARFIVFLVVVAAVVYAWNEGWITRWFNTAVDSGMESVRGTQRDARTVRPADPAEEKK
Ga0196964_101411451	3300020202	Soil	PREPAYHRRMGRFIVLVVVVGAVLYAWHRGWIAQWFTSAVDSGIESVRETQRDARTVRPADPTEQKK
Ga0196964_102448342	3300020202	Soil	MGRLIVLILIVGAIWYAWQKGLITQWFNTAVDSGVESAKRTQREATTVRPVDAPEDKK
Ga0196963_100479272	3300020215	Soil	MGRLIVLILVVGALWYAWQKGLIAQWFNTAVDSSVEGAKRTQRDATKVRPADAPEDKK
Ga0196963_100693922	3300020215	Soil	MGRLIVLIVIVGAIWYAWQKGLIAQWFNTAVDSSVEGAKRTQREATKVRPADAPEDKK
Ga0196973_10478572	3300021061	Soil	MGRLIVLILVVGAVWYAWQKGLIAQWFNTAVDSSVEGAKRTQRDATKVRPA
Ga0196980_10837222	3300021066	Soil	MGRFIVLVVVVGAVLYAWHRGWIAQWFTSAVDSGIESVRETQRDARTVRPADPTEQKK
Ga0209642_100420602	3300025167	Soil	MGKLIVAVAILGAVAFAWNKGWIAHWVNTAVDSGMDSVKGTQRKATTVRPADPGAPEADK
Ga0207660_101293822	3300025917	Corn Rhizosphere	MGKLIVVIVIIAAAVYAWQQGWIAQWFNSAVDSSVDSVKRTQRDATKTREADPGAPAEKK
Ga0207662_106056652	3300025918	Switchgrass Rhizosphere	MGKLIVVIAIVGAVAFAWNKGWIAQWFNSALDSSMDSVKSTQRQATTVRPADPVAPESEK
Ga0207708_105757902	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MGKLIIVVVIIAAAVYAWQQGWIAQWFNSAVDSSVDSVKRTQRDATKTREADPGAPAEKK
Ga0209969_10096072	3300027360	Arabidopsis Thaliana Rhizosphere	MGKLIVLVAIVAALAFAWQKGWIAQWFNSAVDTSIDSVKSTQRAATKVRPADPGAPEAEK
Ga0209969_10306181	3300027360	Arabidopsis Thaliana Rhizosphere	SGPAYHRRMGRFIVFLVVVGAVIYAWNKGWIAQWFTNAVDSGIESVRGTQRDARTVRPVDPGEEKK
Ga0209967_10160621	3300027364	Arabidopsis Thaliana Rhizosphere	MGKLIIALAILGAVAFAWNQGWIAHWVNTAVDSGMDSVKGTQRKATTVRPADPGAPEADK
Ga0209967_10391161	3300027364	Arabidopsis Thaliana Rhizosphere	MGKLIVLVAIVAAVAFAWQKGWIAQWFNSAVDTSIDSVKSTQRAATKVRPADPGAPEP
Ga0209967_10449002	3300027364	Arabidopsis Thaliana Rhizosphere	RMGRFIVFLVVVGAVIYAWNKGWIAQWFTNAVDSGIESVRGTQRDARTVRPVDPGEEKK
Ga0209854_10155703	3300027384	Groundwater Sand	MGKFIVVVVIVGAVAYAWHQGWIGKWFNAAVDTSIDSVKTTQRNATKQ
Ga0209995_10083222	3300027471	Arabidopsis Thaliana Rhizosphere	MGRFIVFLVVVGAVIYAWNKGWIAQWFTNAVDSGIESVRGTQRDARTVRPVDPGEEKK
Ga0208685_10118442	3300027513	Soil	MGKLLVVIAIIAAVAYAWHQGWIQRWIGSAVDSGIENTRRIQRDATKVRPADPGAPEQEK
Ga0208185_100021125	3300027533	Soil	MGKLLVVIAIIAAVAFAWHKGWIGEWIGSAVDSGIENTRRIQRDATKVRPADPGAPEEKK
Ga0209999_10565271	3300027543	Arabidopsis Thaliana Rhizosphere	PFRPSGPAYHRRMGRFIVFLVVVGAVIYAWNKGWIAQWFTNAVDSGIESVRGTQRDARTVRPVDPGEEKK
Ga0209387_10928102	3300027639	Agricultural Soil	MGKLIVVVVVIAVAVYAWQQGWIAQWFNTAVDSSVDSVKRTQREATKVRQDDPAAPAEKK
Ga0209387_12173252	3300027639	Agricultural Soil	MGKLIVAIAILGAVAFAWNKGWIAHWVNTAVDSGMDGVKGTQRKATSVRPADPGAPEADR
Ga0209485_13398912	3300027691	Agricultural Soil	MGKLIVAIAILGAVAFAWNKGWIAHWVNSAVDSGMDSVKGTQRKATTVRPADPGAPEADK
Ga0209966_10033192	3300027695	Arabidopsis Thaliana Rhizosphere	MGRFIVFLVVVGAVIYAWNKGWIAQWFTNAVDSGIESVRGTQRDARTVRPVDPG
Ga0209974_100671072	3300027876	Arabidopsis Thaliana Rhizosphere	MGRFIVLLVVVGAVIYAWNKGWIAQWFTNAVDSGIESVRGTQRDARTVRPVDPGEEKK
Ga0209481_100041934	3300027880	Populus Rhizosphere	MGRFIVFLVVVGAVIYAWNKGWIAQWFSNAVDSGIESVRGTQRDARTVRPVDPGEEKK
Ga0209481_100393772	3300027880	Populus Rhizosphere	MGRLVVVVLIVGAVAYAWHAGWIARWFNSAVDSGIEGVRGTQRKATTVRPADPGAPEAEK
Ga0209481_106429922	3300027880	Populus Rhizosphere	MVVVIIVGALAYAWHAGWIAQWFNSALDSGIEGVRGTQRKATTVRSADPGAEQKQ
Ga0209486_100179722	3300027886	Agricultural Soil	MGRFIVFLVVVGAVIYAWNKGWIAQWFTNAVDSSIESVRGTQRDARTVRPADPAEEKK
Ga0209486_102486602	3300027886	Agricultural Soil	MGKLIVFIAIVAGVAYAWHKGYLGQWFNKAVDSSVEGVRSTQRDATKVRPADPPPEEKK
Ga0207428_100103473	3300027907	Populus Rhizosphere	MVVAIIVGALAYAWHAGWIAQWFNSALDSGIEGVRGTQRKATTVRSADPGAEQKQ
Ga0207428_104016702	3300027907	Populus Rhizosphere	MGKLIVVIVILGAVAFAWNKGWIAQWFNTALDSSMDSVKSTQRQATTVRPVDPVAPDADK
Ga0209382_116283652	3300027909	Populus Rhizosphere	MGKLIVLVVIVAAVVFAWNQGWIAQWFNSAVDSSIDGVRSTQRSATKVRPADPGAPEAEK
Ga0209382_119303082	3300027909	Populus Rhizosphere	MGRLIVVIVIVGAVAYAWNKGWIAQWFNSALDSSIDGVRSTQRQATKVRPADPGAPEAEK
Ga0247828_100936792	3300028587	Soil	MGRFIVLLVVVGAVIYAWNKGWIAQWFSNAVDSGIESVRGTQRDARTVRPVDPGEEKK
Ga0247828_102859102	3300028587	Soil	MGRLVAVVLIVGAVAYAWQAGWIARWFNSAVDSGIEGVRGTQRKATTVRPADPGAPEAEK
Ga0247822_101043272	3300028592	Soil	MGKLIVVIAIVGAVVFAWNKGWIAQWFNTAVDSSMDAVKGTQRKATTVRPADPVIEADKK
Ga0247824_104006212	3300028809	Soil	MGKLIVLVAIVAALAFAWHKGWIAQWFNSAVDTSIDSVKSTQRAATKVRPADPGAPEPEK
Ga0247825_102583482	3300028812	Soil	MGRLIVVIVIVGAVVYAWNKGWIAQWFNSALDSSIDGVRSTQRQATKVRPADPGAPEAEK
Ga0247825_110179272	3300028812	Soil	MGRLIVVIVIVGAVVYAWNKGWIAQWFNSAVDSSIDGVRSTQRQATKVRPADPGAPEAEK
Ga0307497_106206052	3300031226	Soil	MGKLIVVIAIVGAVAFAWNKGWIAQWFNSALDSSMDSVKSTQRQATTVRSADPVAPESDK
Ga0307408_1001017642	3300031548	Rhizosphere	MGKLIVVIVIIAAAVYAWQQGWIAQWFNSAVDSSVDSVKRTQRDATKVRQDEPAAPAEKK
Ga0307408_1005409442	3300031548	Rhizosphere	MGKLIVVIAILGAVAFAWNQGWIAHWVNTAVDSGMDSVKGTQRKATTVRPADPGAPEAEK
Ga0307408_1008244342	3300031548	Rhizosphere	MGKLIVVIAILGAVAFAWNKGWIAHWVNSAVDSGMDSVKSTQRKATTVRPADPGAAEAEK
Ga0307408_1008930701	3300031548	Rhizosphere	MGKLIVVVLIVGAVVFAWNKGWIAQWFNTAVDSGMDSVKSTQRKATTVRPADPVPEADKK
Ga0307408_1016903922	3300031548	Rhizosphere	MGKLIVAIAILGAVAFAWNKGWIAHWVNSAVDSGMDSVKGTQRKATTVRPADPGAPEAER
Ga0247727_10000050232	3300031576	Biofilm	MGKLLVVVAVVAAVGYAWHKGWIAEWLGAAVDSGAQSVRQTQRDATKMRPADPGAPEAEK
Ga0307405_116941211	3300031731	Rhizosphere	RRRLRAMGKLIVVVLIVGAVVFAWNKGWIAQWFNTAVDSGMESVKGTQRKATTVRPADPVPEADKK
Ga0307468_1006973263	3300031740	Hardwood Forest Soil	MGRLIVVILIVGAIAYAWQAGWIAQWFNSAVDSSIDSVNSTRRQATTLRPADPGAPEADK
Ga0307410_105679472	3300031852	Rhizosphere	MGKLIVLIAIVGAVAFAWNKGWIAQWFNTAVDSSIDSVKSTQRSATKVRPADPGAPEAEK
Ga0307410_106910582	3300031852	Rhizosphere	IVVIAILGAVAFAWNKGWIAHWVNSAVDSGMDSVKSTQRKATTVRPADPGAAEAEKK
Ga0307410_108463282	3300031852	Rhizosphere	MGKLIVVIAIVGAVVFAWNKGWIAHWFNTAVDSSMDTVKGTQRKATTVRPADPVVEADKK
Ga0307406_103016932	3300031901	Rhizosphere	MGKLIVAIAILGAVAFAWNKGWIAHWVNSAVDSGMDSVKGTQRKATTVRPADPGAPEAEK
Ga0307412_107921412	3300031911	Rhizosphere	MGKLIVVIVIIAAAVYAWQQGWIAQWFNSAVDSSVDSVKRTQRDATKVRQDE
Ga0307412_119715261	3300031911	Rhizosphere	IAAAVYAWQQGWIAQWFNSAVDSSVDSVKRTQRDATKVRQDDPAPAEKK
Ga0307414_121786522	3300032004	Rhizosphere	MGKLIVLIAIVGAVAFAWNKGWIAQWFNTAVDSSIDSVKSTQRSATKVRPADPGAPEADK
Ga0315910_101124392	3300032144	Soil	MGKLIVVIVIIAAAVYAWQQGWISQWFNSAVDSSVDSVKRTQRDATKVRQDDPPPADKK
Ga0315910_101245842	3300032144	Soil	MGKLIVVIAIVGAVVFAWNKGWIAQWFNTAVDSSMDAVKGTQRKATTVRPADPVVEAEKK
Ga0315910_105190792	3300032144	Soil	MGKLIVLIAIVAAVAFAWNKGWIAQWFNAAVDTSIDSVKSTQRAATKVRPADPGAPEPEK
Ga0315910_115171231	3300032144	Soil	MGKLIVLIAIVGAIAFAWNKGWIAEWFNTAVDSSIDSVKSTQRSATKVRPADPGAPEAEK
Ga0315912_100351963	3300032157	Soil	MGKLIALIAIVGAVAFAWNKGWIAEWFNTAVDSSIDSVRSTQRSATKVRPADPGAPEAEK
Ga0247830_100810205	3300033551	Soil	MRKLVVVILIVGALAYAWHAGWIAQWFNSALDSGIEGVRGTQRKATTLRPADPGAPEPDK
Ga0247830_111525792	3300033551	Soil	MGKLIVVIAIVGAVVFAWNKGWIAQWFNTAVDSSMDAVKGTQRKATTVRPADPVTEADKK
Ga0364925_0090964_682_867	3300034147	Sediment	MGKLLVVIAIIAAVAFAWHKGWIAEWFGSAVDSGIENTRRIQRDATKVRPADPGAPEQEK
Ga0364927_0052951_565_750	3300034148	Sediment	MGKLLVVIAIIAAVAYAWHQGWIQRWIGSAVDSGIENTRRIQRDATKMRPADPGAPEQEK
Ga0314793_145558_359_532	3300034668	Soil	MGKLIVVIVILGAVAFAWNKGWIAQWFNTALDSSMDSVKSTQRQATTVRPVDPVAPDA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F042553

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences