Metagenome / Metatranscriptome Family F042527

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F042527
Family Type	Metagenome / Metatranscriptome
Number of Sequences	158
Average Sequence Length	40 residues
Representative Sequence	SGDAFQKKYFDAIQRDPAVVIEHAELARLFNNEPPDSSTP
Number of Associated Samples	132
Number of Associated Scaffolds	158

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	99.37 %
% of genes from short scaffolds (< 2000 bps)	90.51 %
Associated GOLD sequencing projects	127
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.937 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (20.253 % of family members)
Environment Ontology (ENVO)	Unclassified (31.013 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.532 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 39.71% β-sheet: 0.00% Coil/Unstructured: 60.29%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 158 Family Scaffolds
PF14684	Tricorn_C1	23.42
PF02245	Pur_DNA_glyco	17.09
PF13590	DUF4136	13.92
PF14542	Acetyltransf_CG	8.86
PF06902	Fer4_19	2.53
PF02678	Pirin	2.53
PF02518	HATPase_c	2.53
PF00072	Response_reg	1.90
PF13847	Methyltransf_31	1.90
PF05726	Pirin_C	1.27
PF07589	PEP-CTERM	1.27
PF08281	Sigma70_r4_2	1.27
PF13432	TPR_16	0.63
PF03795	YCII	0.63
PF03544	TonB_C	0.63
PF17152	CHASE8	0.63
PF13187	Fer4_9	0.63
PF12681	Glyoxalase_2	0.63
PF00920	ILVD_EDD	0.63
PF07366	SnoaL	0.63

COG ID	Name	Functional Category	% Frequency in 158 Family Scaffolds
COG2094	3-methyladenine DNA glycosylase Mpg	Replication, recombination and repair [L]	17.09
COG1741	Redox-sensitive bicupin YhaK, pirin superfamily	General function prediction only [R]	3.80
COG0129	Dihydroxyacid dehydratase/phosphogluconate dehydratase	Carbohydrate transport and metabolism [G]	1.27
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.63
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.63

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.94 %
Unclassified	root	N/A	5.06 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.94 %
Unclassified	root	N/A	5.06 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.94 %
Unclassified	root	N/A	5.06 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	48.73 %
Unclassified	root	N/A	5.06 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	2.53 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.63 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	5.06 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	2.53 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.90 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.90 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.63 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	5.06 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2.53 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.90 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1.27 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.63 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.63 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	5.06 %
Chitinophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia	1.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.90 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	1.27 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.63 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.63 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	5.06 %
Chitinophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales	1.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.90 %
unclassified Bryobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae	1.27 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.63 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.63 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	5.06 %
Chitinophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	1.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.90 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	1.27 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.63 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.63 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	5.06 %
Chitinophaga	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Chitinophaga	1.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.90 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	1.27 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.63 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.63 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.63 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573000\|GPBTN7E01B3LUK	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300001593\|JGI12635J15846_10079736	All Organisms → cellular organisms → Bacteria	2398	Open in IMG/M
3300002245\|JGIcombinedJ26739_101436629	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300002245\|JGIcombinedJ26739_101447897	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300002907\|JGI25613J43889_10020786	All Organisms → cellular organisms → Bacteria	1851	Open in IMG/M
3300002914\|JGI25617J43924_10248666	All Organisms → cellular organisms → Bacteria → Acidobacteria	601	Open in IMG/M
3300004082\|Ga0062384_100931378	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300004091\|Ga0062387_100149601	All Organisms → cellular organisms → Bacteria	1342	Open in IMG/M
3300005175\|Ga0066673_10074168	All Organisms → cellular organisms → Bacteria	1775	Open in IMG/M
3300005541\|Ga0070733_10968077	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300005591\|Ga0070761_10067740	All Organisms → cellular organisms → Bacteria	2023	Open in IMG/M
3300005764\|Ga0066903_105493571	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300005764\|Ga0066903_107700198	All Organisms → cellular organisms → Bacteria → Acidobacteria	554	Open in IMG/M
3300006173\|Ga0070716_100101166	All Organisms → cellular organisms → Bacteria	1767	Open in IMG/M
3300006176\|Ga0070765_100062487	All Organisms → cellular organisms → Bacteria	3091	Open in IMG/M
3300006755\|Ga0079222_10594831	All Organisms → cellular organisms → Bacteria	843	Open in IMG/M
3300006854\|Ga0075425_100747780	All Organisms → cellular organisms → Bacteria	1122	Open in IMG/M
3300009012\|Ga0066710_101430118	All Organisms → cellular organisms → Bacteria	1071	Open in IMG/M
3300009089\|Ga0099828_10913624	Not Available	784	Open in IMG/M
3300009090\|Ga0099827_10073338	All Organisms → cellular organisms → Bacteria	2650	Open in IMG/M
3300009090\|Ga0099827_11914746	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300009137\|Ga0066709_100025859	All Organisms → cellular organisms → Bacteria	6073	Open in IMG/M
3300009545\|Ga0105237_10483348	All Organisms → cellular organisms → Bacteria → Acidobacteria	1245	Open in IMG/M
3300009698\|Ga0116216_10869961	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300010043\|Ga0126380_11423473	All Organisms → cellular organisms → Bacteria → Acidobacteria	610	Open in IMG/M
3300010048\|Ga0126373_10213232	All Organisms → cellular organisms → Bacteria → Acidobacteria	1879	Open in IMG/M
3300010048\|Ga0126373_11184150	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
3300010320\|Ga0134109_10117552	All Organisms → cellular organisms → Bacteria	937	Open in IMG/M
3300010343\|Ga0074044_10454589	All Organisms → cellular organisms → Bacteria → Acidobacteria	838	Open in IMG/M
3300010358\|Ga0126370_11919019	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	576	Open in IMG/M
3300010361\|Ga0126378_10467425	All Organisms → cellular organisms → Bacteria	1376	Open in IMG/M
3300010361\|Ga0126378_10584630	All Organisms → cellular organisms → Bacteria	1231	Open in IMG/M
3300010361\|Ga0126378_13391475	All Organisms → cellular organisms → Bacteria → Acidobacteria	506	Open in IMG/M
3300011120\|Ga0150983_14473137	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	880	Open in IMG/M
3300011270\|Ga0137391_10209505	All Organisms → cellular organisms → Bacteria → Acidobacteria	1694	Open in IMG/M
3300011271\|Ga0137393_10961577	All Organisms → cellular organisms → Bacteria → Acidobacteria	728	Open in IMG/M
3300011271\|Ga0137393_11492946	All Organisms → cellular organisms → Bacteria → Acidobacteria	565	Open in IMG/M
3300012096\|Ga0137389_10952673	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300012096\|Ga0137389_11370202	All Organisms → cellular organisms → Bacteria → Acidobacteria	602	Open in IMG/M
3300012202\|Ga0137363_10004677	All Organisms → cellular organisms → Bacteria → Acidobacteria	8411	Open in IMG/M
3300012202\|Ga0137363_10965338	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300012202\|Ga0137363_11076212	All Organisms → cellular organisms → Bacteria → Acidobacteria	683	Open in IMG/M
3300012203\|Ga0137399_11211234	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Chitinophaga	636	Open in IMG/M
3300012208\|Ga0137376_10806895	All Organisms → cellular organisms → Bacteria → Acidobacteria	808	Open in IMG/M
3300012210\|Ga0137378_10502352	All Organisms → cellular organisms → Bacteria	1120	Open in IMG/M
3300012285\|Ga0137370_10168328	All Organisms → cellular organisms → Bacteria	1274	Open in IMG/M
3300012361\|Ga0137360_11594164	All Organisms → cellular organisms → Bacteria → Acidobacteria	558	Open in IMG/M
3300012922\|Ga0137394_11512274	All Organisms → cellular organisms → Bacteria → Acidobacteria	530	Open in IMG/M
3300012923\|Ga0137359_10194297	All Organisms → cellular organisms → Bacteria → Acidobacteria	1813	Open in IMG/M
3300012924\|Ga0137413_11314811	All Organisms → cellular organisms → Bacteria → Acidobacteria	581	Open in IMG/M
3300012929\|Ga0137404_10308754	All Organisms → cellular organisms → Bacteria	1374	Open in IMG/M
3300012944\|Ga0137410_12090636	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300012960\|Ga0164301_10521700	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300012971\|Ga0126369_10375593	Not Available	1452	Open in IMG/M
3300013832\|Ga0120132_1015543	All Organisms → cellular organisms → Bacteria	1304	Open in IMG/M
3300014154\|Ga0134075_10396145	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300014200\|Ga0181526_10222760	All Organisms → cellular organisms → Bacteria → Acidobacteria	1205	Open in IMG/M
3300014325\|Ga0163163_10895161	All Organisms → cellular organisms → Bacteria → Acidobacteria	951	Open in IMG/M
3300015245\|Ga0137409_10450206	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	1107	Open in IMG/M
3300016319\|Ga0182033_10323592	All Organisms → cellular organisms → Bacteria → Acidobacteria	1280	Open in IMG/M
3300016319\|Ga0182033_11435985	All Organisms → cellular organisms → Bacteria → Acidobacteria	622	Open in IMG/M
3300016341\|Ga0182035_10149720	Not Available	1790	Open in IMG/M
3300016341\|Ga0182035_11640734	All Organisms → cellular organisms → Bacteria → Acidobacteria	580	Open in IMG/M
3300016404\|Ga0182037_11518105	All Organisms → cellular organisms → Bacteria → Acidobacteria	594	Open in IMG/M
3300017934\|Ga0187803_10431640	All Organisms → cellular organisms → Bacteria → Acidobacteria	536	Open in IMG/M
3300017961\|Ga0187778_10468723	All Organisms → cellular organisms → Bacteria → Acidobacteria	833	Open in IMG/M
3300017966\|Ga0187776_10644163	All Organisms → cellular organisms → Bacteria → Acidobacteria	743	Open in IMG/M
3300017975\|Ga0187782_11481712	All Organisms → cellular organisms → Bacteria → Acidobacteria	534	Open in IMG/M
3300018468\|Ga0066662_11437396	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Chitinophaga	715	Open in IMG/M
3300019788\|Ga0182028_1408159	All Organisms → cellular organisms → Bacteria	1757	Open in IMG/M
3300020199\|Ga0179592_10080138	All Organisms → cellular organisms → Bacteria → Acidobacteria	1497	Open in IMG/M
3300020579\|Ga0210407_10537809	All Organisms → cellular organisms → Bacteria → Acidobacteria	912	Open in IMG/M
3300020580\|Ga0210403_10133172	All Organisms → cellular organisms → Bacteria	2027	Open in IMG/M
3300020580\|Ga0210403_10214987	All Organisms → cellular organisms → Bacteria	1577	Open in IMG/M
3300020580\|Ga0210403_10314410	All Organisms → cellular organisms → Bacteria	1283	Open in IMG/M
3300020580\|Ga0210403_11115088	All Organisms → cellular organisms → Bacteria → Acidobacteria	612	Open in IMG/M
3300020582\|Ga0210395_10036267	All Organisms → cellular organisms → Bacteria	3616	Open in IMG/M
3300021171\|Ga0210405_10295626	All Organisms → cellular organisms → Bacteria → Acidobacteria	1280	Open in IMG/M
3300021181\|Ga0210388_11769784	All Organisms → cellular organisms → Bacteria → Acidobacteria	510	Open in IMG/M
3300021402\|Ga0210385_10437146	All Organisms → cellular organisms → Bacteria → Acidobacteria	986	Open in IMG/M
3300021403\|Ga0210397_10190287	All Organisms → cellular organisms → Bacteria → Acidobacteria	1461	Open in IMG/M
3300021403\|Ga0210397_11011858	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	645	Open in IMG/M
3300021404\|Ga0210389_10433338	Not Available	1034	Open in IMG/M
3300021405\|Ga0210387_10096580	All Organisms → cellular organisms → Bacteria → Acidobacteria	2464	Open in IMG/M
3300021420\|Ga0210394_11311493	All Organisms → cellular organisms → Bacteria → Acidobacteria	618	Open in IMG/M
3300021479\|Ga0210410_10340200	All Organisms → cellular organisms → Bacteria	1345	Open in IMG/M
3300021559\|Ga0210409_10240137	All Organisms → cellular organisms → Bacteria	1642	Open in IMG/M
3300021559\|Ga0210409_10644050	All Organisms → cellular organisms → Bacteria → Acidobacteria	929	Open in IMG/M
3300021559\|Ga0210409_11072235	All Organisms → cellular organisms → Bacteria → Acidobacteria	680	Open in IMG/M
3300021559\|Ga0210409_11710132	All Organisms → cellular organisms → Bacteria → Acidobacteria	506	Open in IMG/M
3300021560\|Ga0126371_12557287	All Organisms → cellular organisms → Bacteria → Acidobacteria	618	Open in IMG/M
3300022557\|Ga0212123_10293232	All Organisms → cellular organisms → Bacteria	1141	Open in IMG/M
3300022722\|Ga0242657_1033636	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300024186\|Ga0247688_1009074	All Organisms → cellular organisms → Bacteria	1381	Open in IMG/M
3300024186\|Ga0247688_1014387	All Organisms → cellular organisms → Bacteria → Acidobacteria	1129	Open in IMG/M
3300025905\|Ga0207685_10128006	All Organisms → cellular organisms → Bacteria	1123	Open in IMG/M
3300025906\|Ga0207699_10256225	All Organisms → cellular organisms → Bacteria	1208	Open in IMG/M
3300025914\|Ga0207671_10376138	All Organisms → cellular organisms → Bacteria → Acidobacteria	1128	Open in IMG/M
3300025916\|Ga0207663_10109157	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1875	Open in IMG/M
3300025916\|Ga0207663_11172200	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300025934\|Ga0207686_11584398	All Organisms → cellular organisms → Bacteria → Acidobacteria	541	Open in IMG/M
3300025939\|Ga0207665_10158257	All Organisms → cellular organisms → Bacteria → Acidobacteria	1627	Open in IMG/M
3300026333\|Ga0209158_1229688	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Chitinophaga	638	Open in IMG/M
3300026889\|Ga0207745_1021431	All Organisms → cellular organisms → Bacteria → Acidobacteria	573	Open in IMG/M
3300027000\|Ga0207803_1016751	All Organisms → cellular organisms → Bacteria → Acidobacteria	972	Open in IMG/M
3300027045\|Ga0207726_1034278	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300027439\|Ga0209332_1098190	All Organisms → cellular organisms → Bacteria → Acidobacteria	525	Open in IMG/M
3300027546\|Ga0208984_1049453	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300027651\|Ga0209217_1040615	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1431	Open in IMG/M
3300027671\|Ga0209588_1118512	All Organisms → cellular organisms → Bacteria → Acidobacteria	848	Open in IMG/M
3300027674\|Ga0209118_1009871	All Organisms → cellular organisms → Bacteria	3291	Open in IMG/M
3300027826\|Ga0209060_10259304	Not Available	796	Open in IMG/M
3300027842\|Ga0209580_10585361	All Organisms → cellular organisms → Bacteria → Acidobacteria	554	Open in IMG/M
3300027846\|Ga0209180_10075892	All Organisms → cellular organisms → Bacteria	1892	Open in IMG/M
3300027846\|Ga0209180_10349272	All Organisms → cellular organisms → Bacteria	843	Open in IMG/M
3300027862\|Ga0209701_10021572	All Organisms → cellular organisms → Bacteria	4200	Open in IMG/M
3300027875\|Ga0209283_10080262	All Organisms → cellular organisms → Bacteria → Acidobacteria	2113	Open in IMG/M
3300027882\|Ga0209590_10246430	All Organisms → cellular organisms → Bacteria	1139	Open in IMG/M
3300027884\|Ga0209275_10115567	All Organisms → cellular organisms → Bacteria	1389	Open in IMG/M
3300027895\|Ga0209624_11095634	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300027903\|Ga0209488_10385961	All Organisms → cellular organisms → Bacteria	1038	Open in IMG/M
3300027908\|Ga0209006_10170163	All Organisms → cellular organisms → Bacteria	1904	Open in IMG/M
3300028016\|Ga0265354_1006409	All Organisms → cellular organisms → Bacteria	1168	Open in IMG/M
3300028536\|Ga0137415_10023334	All Organisms → cellular organisms → Bacteria	6116	Open in IMG/M
3300028775\|Ga0302231_10432262	All Organisms → cellular organisms → Bacteria → Acidobacteria	555	Open in IMG/M
3300028776\|Ga0302303_10026735	All Organisms → cellular organisms → Bacteria	2428	Open in IMG/M
3300030707\|Ga0310038_10232930	Not Available	861	Open in IMG/M
3300030759\|Ga0265745_1007027	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300030813\|Ga0265750_1009595	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300030879\|Ga0265765_1023159	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300030945\|Ga0075373_10207184	All Organisms → cellular organisms → Bacteria → Acidobacteria	597	Open in IMG/M
3300030991\|Ga0073994_10052854	All Organisms → cellular organisms → Bacteria → Proteobacteria	2413	Open in IMG/M
3300030991\|Ga0073994_11654302	All Organisms → cellular organisms → Bacteria → Acidobacteria	680	Open in IMG/M
3300031057\|Ga0170834_101657560	All Organisms → cellular organisms → Bacteria → Acidobacteria	573	Open in IMG/M
3300031090\|Ga0265760_10064790	All Organisms → cellular organisms → Bacteria → Acidobacteria	1115	Open in IMG/M
3300031474\|Ga0170818_101731143	All Organisms → cellular organisms → Bacteria → Acidobacteria	517	Open in IMG/M
3300031561\|Ga0318528_10314254	Not Available	841	Open in IMG/M
3300031681\|Ga0318572_10476119	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300031718\|Ga0307474_10460490	All Organisms → cellular organisms → Bacteria → Acidobacteria	995	Open in IMG/M
3300031753\|Ga0307477_11083313	All Organisms → cellular organisms → Bacteria → Acidobacteria	523	Open in IMG/M
3300031754\|Ga0307475_10156489	All Organisms → cellular organisms → Bacteria → Acidobacteria	1811	Open in IMG/M
3300031820\|Ga0307473_10833613	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300031820\|Ga0307473_10896376	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300031823\|Ga0307478_11126387	All Organisms → cellular organisms → Bacteria → Acidobacteria	654	Open in IMG/M
3300031890\|Ga0306925_10375915	Not Available	1524	Open in IMG/M
3300031941\|Ga0310912_10343499	All Organisms → cellular organisms → Bacteria	1158	Open in IMG/M
3300031942\|Ga0310916_10976890	All Organisms → cellular organisms → Bacteria → Acidobacteria	707	Open in IMG/M
3300031962\|Ga0307479_10606122	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	1077	Open in IMG/M
3300031962\|Ga0307479_10787309	All Organisms → cellular organisms → Bacteria	927	Open in IMG/M
3300031962\|Ga0307479_11841822	All Organisms → cellular organisms → Bacteria → Acidobacteria	556	Open in IMG/M
3300031981\|Ga0318531_10558185	All Organisms → cellular organisms → Bacteria → Acidobacteria	519	Open in IMG/M
3300032035\|Ga0310911_10463255	All Organisms → cellular organisms → Bacteria → Acidobacteria	734	Open in IMG/M
3300032052\|Ga0318506_10303647	All Organisms → cellular organisms → Bacteria → Acidobacteria	708	Open in IMG/M
3300032174\|Ga0307470_11547783	All Organisms → cellular organisms → Bacteria → Acidobacteria	553	Open in IMG/M
3300032180\|Ga0307471_101559205	All Organisms → cellular organisms → Bacteria → Acidobacteria	817	Open in IMG/M
3300032205\|Ga0307472_101302225	All Organisms → cellular organisms → Bacteria → Acidobacteria	700	Open in IMG/M
3300032783\|Ga0335079_10268090	All Organisms → cellular organisms → Bacteria → Acidobacteria	1872	Open in IMG/M
3300032805\|Ga0335078_11089059	All Organisms → cellular organisms → Bacteria → Acidobacteria	936	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.20%
Host-Associated	Host-Associated	3.80%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.04%
Plants	Host-Associated → Plants	3.80%
Aquatic	Environmental → Aquatic	3.16%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.77%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.16%
Freshwater	Environmental → Aquatic → Freshwater	2.53%
Peat	Environmental → Terrestrial → Peat	1.27%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.63%
Roots	Host-Associated → Plants → Roots	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	71.52%
Loam	Environmental → Terrestrial → Soil → Loam	15.82%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.43%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.53%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.27%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.63%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.63%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.91%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	32.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.39%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.43%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.53%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.90%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.27%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.63%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.63%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.63%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.63%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.63%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.63%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.25%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	19.62%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.59%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.33%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.16%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.16%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.16%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.90%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.90%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.90%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.27%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.27%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.27%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.27%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.27%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.27%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.27%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.63%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.63%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.63%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.63%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.63%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.63%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.63%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.63%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.63%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.63%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573000	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis 0-21cm (T0 for microcosms)	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013832	Permafrost microbial communities from Nunavut, Canada - A3_5cm_0M	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019788	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024186	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK29	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026889	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 57 (SPAdes)	Environmental	Open in IMG/M
3300027000	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 41 (SPAdes)	Environmental	Open in IMG/M
3300027045	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 40 (SPAdes)	Environmental	Open in IMG/M
3300027439	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027546	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028016	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028775	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_2	Environmental	Open in IMG/M
3300028776	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_1	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300030759	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030813	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030879	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030945	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
N55_10360660	2189573000	Grass Soil	FVPSESGDAFQKRYFDAIQRDPAVVMEHAELARLFNSEPADAAWR
JGI12635J15846_100797361	3300001593	Forest Soil	FQKKYFDAIQRDPAVVIDHAELARLFNNEPPDTSAP*
JGIcombinedJ26739_1014366291	3300002245	Forest Soil	FAPSEWGDAFQKRYFDAIQRDPAVVMEHAELARLFANEPSDASPT*
JGIcombinedJ26739_1014478971	3300002245	Forest Soil	LFVPSESGDAFQKRYFDAIQRDPAVVMEHAELARLFNSEQSGD*
JGI25613J43889_100207866	3300002907	Grasslands Soil	SGDAFQKKYFDAIQRDPAVVIDHAELARLFNNEPPDTSAP*
JGI25617J43924_102486661	3300002914	Grasslands Soil	SGDAFQKKYFDAIQRDPAVVIEHAELARLFNNEPPDSSTP*
Ga0062384_1009313781	3300004082	Bog Forest Soil	ESGDAFQKKYFDAIQMDPAVVIDHAELARLFNNEPPDVSSP*
Ga0062387_1001496013	3300004091	Bog Forest Soil	SESGDAFQKKYYDAIQMDPAVVIDHAQLARLFNDEPPDVSSQ*
Ga0066673_100741681	3300005175	Soil	TESGDHFQKKYFDAIQNDPAVVIEHAELAKLFNNEPPDSSAA*
Ga0070733_109680772	3300005541	Surface Soil	AEEGDAFQKRYFDAIQRDPAVVMEHAELARLFANEPSDTSTT*
Ga0070761_100677401	3300005591	Soil	ESGDAFQKKYYDAIQLDPAVVIDHAELARLFNNEPPDVSST*
Ga0066903_1054935712	3300005764	Tropical Forest Soil	ETGDGFQKQYFDAIQRDPAVVMEHAELVRLFNNEPPDRE*
Ga0066903_1077001981	3300005764	Tropical Forest Soil	NFQKKYFAAIQNDPAVVIEHAELAKLFNNEPPDSSAA*
Ga0070716_1001011661	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	TESGDSFQKRYYDAIQRDPTVVMEHAELARLFGSEPREAENQ*
Ga0070765_1000624871	3300006176	Soil	KKYFDAIQRDPAVVIDHAELARLFNNEPPDSPNP*
Ga0079222_105948311	3300006755	Agricultural Soil	KRYFDAIQRDPAVVMEHAELARLFANEPSDTSAT*
Ga0075425_1007477803	3300006854	Populus Rhizosphere	SGDNFQKKYFAAIQNDPAVVIEHAELAKLFNNEPPDSSAA*
Ga0066710_1014301182	3300009012	Grasslands Soil	SDNGDGFQKLYYDAIQRDPLVVMEHAELARLFAQEPPDPPTPAR
Ga0099828_109136242	3300009089	Vadose Zone Soil	FQKKYFDAIQNDPAVVMEHAELARLFLNEPAERESE*
Ga0099827_100733381	3300009090	Vadose Zone Soil	ESGDAFQKKYFDAIQRDPTVVIEHAELARLFNNEPPDSSTP*
Ga0099827_119147461	3300009090	Vadose Zone Soil	TESGDSFQKKYFEAIQRDPVVVIDHAELVRLFNNEPPDSANP*
Ga0066709_1000258597	3300009137	Grasslands Soil	FQKLYYDAIQRDPLVVMEHAELARLFAQEPPDPPTPAR*
Ga0105237_104833481	3300009545	Corn Rhizosphere	ESGDSFQKRYFDAIQRDPAVVMVHADLAKVFANEPRQQAAS*
Ga0116216_108699612	3300009698	Peatlands Soil	GFQKKYFDAIQKDPAVVMEHAELVRLFHNAPPDAENE*
Ga0126380_114234732	3300010043	Tropical Forest Soil	QKRHFDAIQRDPAVVMEHAELAKIFANEPGETPAS*
Ga0126373_102132325	3300010048	Tropical Forest Soil	VPTESGDGFQKKYFDAIQSDPAVVIEHAELARLFNNEPPDSSGA*
Ga0126373_111841503	3300010048	Tropical Forest Soil	VPTESGDGFQKKYFDAIQSDPAVVIEHAELARLFNNEPPDFSGA*
Ga0134109_101175521	3300010320	Grasslands Soil	KKYFDAIQNDPAVVIEHAELAKLFNNEPPDSSAA*
Ga0074044_104545891	3300010343	Bog Forest Soil	KKYFDAIQKDPAVVIEHAELARLFHNEPLDREGE*
Ga0126370_119190192	3300010358	Tropical Forest Soil	APSESGDAFQKRYFAAIQRDPSVVMEHAELARLFSNEPSDPGS*
Ga0126378_104674254	3300010361	Tropical Forest Soil	DGFQKQYFDAIQRDPAVVMEHAELARLFNNEPPDREGE*
Ga0126378_105846303	3300010361	Tropical Forest Soil	APTEAGDGFQKQYFDAIQRDPTVVMEHAELVRLFNNEPPDRESD*
Ga0126378_133914751	3300010361	Tropical Forest Soil	GDGFQKKYFDAIQSDPAVVIEHAELARLFNNEPPDFSGA*
Ga0150983_144731371	3300011120	Forest Soil	GDAFQKKYFDAIQRDPAVVIDHAELARLFNNEPPDTSAP*
Ga0137391_102095051	3300011270	Vadose Zone Soil	VPTESGDAFQKKYFDAIQNDPAVVIDHAELARLFNNEPPDSSTP*
Ga0137393_109615772	3300011271	Vadose Zone Soil	EFGDAFQKRYFDAIQRDPAVVMEHAELARLFANEPSDASAM*
Ga0137393_114929461	3300011271	Vadose Zone Soil	KRYFDAIQRDPAVVMEHAELARLFANEPSDASPTY*
Ga0137389_109526732	3300012096	Vadose Zone Soil	ESGDAFQKKYFDAIQRDPAVVIDHAELARLFNNEPPDSSTP*
Ga0137389_113702022	3300012096	Vadose Zone Soil	FAPSEFGDAFQKRYFDAIQRDPAVVMEHAELARLFANEPSDASAM*
Ga0137363_100046771	3300012202	Vadose Zone Soil	KKYFDAIQNDPAVVIDHAELARLFNNEPPDSSTP*
Ga0137363_109653383	3300012202	Vadose Zone Soil	FQKKYFDAIQRDPTVVMEHAELARLFNNEPPDTGSL*
Ga0137363_110762122	3300012202	Vadose Zone Soil	APSESGDAFQKRYFDAIQRDPAVVMEHAELARLFANEPSDASPT*
Ga0137399_112112343	3300012203	Vadose Zone Soil	SGDSFQKKYFDAIQRDPAVVIEHAELARLFNNEPPDSASS*
Ga0137376_108068952	3300012208	Vadose Zone Soil	FQKRYFDAIQRDPAVVMEHAELARLFANEPSDTSAM*
Ga0137378_105023523	3300012210	Vadose Zone Soil	DAFQKKYFDAIQRDPAVVIDHAELARLFNTEPPDSPTV*
Ga0137370_101683283	3300012285	Vadose Zone Soil	ESGVAFQKQYFDAIQRDPAVVIDHAELARLFNNEPCDSPTP*
Ga0137360_115941641	3300012361	Vadose Zone Soil	TGDGFQKQYFDAIQRDPAVVMEHAELVRLFNNEPPDAEV*
Ga0137394_115122741	3300012922	Vadose Zone Soil	MFAPSEFGDAFQKRYFDAIQRDPAVVMEHAELARLFANEPSDASAM*
Ga0137359_101942973	3300012923	Vadose Zone Soil	DAFQKRYFDAIQRDPAVVMEHAELARLFANEPSDASAT*
Ga0137413_113148111	3300012924	Vadose Zone Soil	PSEFGDAFQKRYFDAIQRDPAVVMEHAELARLFANEPSDTSAM*
Ga0137404_103087541	3300012929	Vadose Zone Soil	PTESGDAFQKKYFDAIQRDPAVVIDHAELARLFNNEPPDTSAP*
Ga0137410_120906362	3300012944	Vadose Zone Soil	ESGDAFQKKYFDAIQLDPAVVIDHAELARLFNNEPPDVSPP*
Ga0164301_105217002	3300012960	Soil	SESGDAFQKKYFDAIQSDPAVVIDHAELARLFNNAPPDASSL*
Ga0126369_103755934	3300012971	Tropical Forest Soil	GDGFQKKYFDAIQKDPAVVMEHAQLARLFNTEPADREPG*
Ga0120132_10155431	3300013832	Permafrost	ESGDAFQKRYFDAIQRDPAVVMEHAELARLFNNEPADSGAA*
Ga0134075_103961451	3300014154	Grasslands Soil	GDGFQKLYYDAIQRDPLVVMEHAELARLFAQEPPDPPTPAR*
Ga0181526_102227601	3300014200	Bog	GDGFQKKYFDAIHKDPAVVMEHAELARLFHNEPLDRETE*
Ga0163163_108951611	3300014325	Switchgrass Rhizosphere	MFAPSDVGDAFQKRYYDAIQRDPTVVMEHAELARLFLNEPLDSPP*
Ga0137409_104502063	3300015245	Vadose Zone Soil	TETGDGFQKQYFDAIQRDPAVVMEHAELVRLFNNEPPDVEA*
Ga0182033_103235923	3300016319	Soil	FQKKYFDAIQSDPTVVMEHAELVRLFNNEPTEREVE
Ga0182033_114359851	3300016319	Soil	SERGDGFQKKYFDAIQRDPAVVMEHAELARLFQSEPQEREGE
Ga0182035_101497201	3300016341	Soil	IFAPSESGDGFQKKYFDAIQRDPSVVMEHAVLVRLFSNEPADSEGS
Ga0182035_116407341	3300016341	Soil	FAPTEAGDGFQKQYFDAIQRDPAVVMEHAELVRLFNNEPPDRESE
Ga0182037_115181052	3300016404	Soil	SESGDGFQKKYFDAIQRDPSVVMEHAALVRLFSNVPGDSDGT
Ga0187803_104316402	3300017934	Freshwater Sediment	FQKKYFDAIQKDPAVVMEHADLARLFHNEPVDPENE
Ga0187778_104687231	3300017961	Tropical Peatland	GDGFQKQYFDAIQRDPAVVMEHAELARLFNNEPPDQ
Ga0187776_106441632	3300017966	Tropical Peatland	ETGDGFQKKYFDAIQKDPAVVMEHAELARLFHNEPVDHEGE
Ga0187782_114817121	3300017975	Tropical Peatland	DAFQKRYFAAIQRDPAVVMEHAELARLFSNEPPETSGT
Ga0066662_114373961	3300018468	Grasslands Soil	TESGDTFQKKYFVAIQRDPAVVIEHAELARLFNNEPPDSATP
Ga0182028_14081591	3300019788	Fen	TGDGFQKKYFDAIQKDPAVVMEHAELVRLFHIEPPGAENQ
Ga0179592_100801381	3300020199	Vadose Zone Soil	AFQKRYFDAIQRDPAVVMEHAELARLFANEPSDTSAM
Ga0210407_105378092	3300020579	Soil	AFQKRYFDAIQRDPAVVMEHAELARLFANEPSDASPT
Ga0210403_101331723	3300020580	Soil	VPTRSGEAFQKKYFDAIQNDPAVVIDHAELARLFNNEPPDSSNP
Ga0210403_102149871	3300020580	Soil	GFQKQYFDAIQRDPAVVMEHAELVRLFNNEPSDPEG
Ga0210403_103144101	3300020580	Soil	FQKQYFDAIQRDPAVVMEHAELVRLFNTEPPDAEG
Ga0210403_111150881	3300020580	Soil	PTESGDAFQKKYFDAIQRDPAVVIDHAELARLFNNEPPDSATP
Ga0210395_100362674	3300020582	Soil	FTPNESGDSFQKKYYGAIHGDPTVVMDHAELARLFNSEPSDAGAAQ
Ga0210405_102956262	3300021171	Soil	DAFQKRYFDAIQRDPAVVMEHAELARLFANEPSDVNPT
Ga0210388_117697842	3300021181	Soil	APSESGDAFQKRYFDAIQRDPAVVMEHAELARLFANEPSDVNPT
Ga0210385_104371462	3300021402	Soil	EAGDAFQKRYFDAIQRDPAVVMVHAELARIFANEPGEAAGT
Ga0210397_101902872	3300021403	Soil	PSESGDAFQKRYFDAIQREPAVVMVHADLAKIFANEPGEQTAG
Ga0210397_110118582	3300021403	Soil	GDGFQKRYFDAIQRDPAVVMEHAELARLFANEPADPAPS
Ga0210389_104333381	3300021404	Soil	DGFQKKYFEAIHKDPAVVMEHAELARMFLTEPVDGEG
Ga0210387_100965801	3300021405	Soil	DGFQKRYFDAIQRDPAVVMEHAELARLFANEPADPAPS
Ga0210394_113114932	3300021420	Soil	ESGDAFQKRYFDAIQRDPAVVMEHAELARLFANEPSDASPT
Ga0210410_103402003	3300021479	Soil	FAPTETGDGFQKQYFDAIQRDPAVVMEHAELVRLFNNEPSDPEG
Ga0210409_102401371	3300021559	Soil	TESGDAFQKKYFDAIQRDPAVVIDHAELARLFNNEPPDTSAP
Ga0210409_106440501	3300021559	Soil	TDSGDGFQKKYFAAIQRDPAVVIDHAELARLFNIEPPDSPTP
Ga0210409_110722353	3300021559	Soil	SGDAFQKKYFDAIQRDPAVVIDHAELARLFNNEPPDSSAP
Ga0210409_117101321	3300021559	Soil	PTETGDGFQKKYFEAIHKDPAVVMEHAELARMFLTEPVDGEG
Ga0126371_125572871	3300021560	Tropical Forest Soil	DGFQKKYFDAIQRDPSVVMEHAALVRLFSNAPGDFDGT
Ga0212123_102932321	3300022557	Iron-Sulfur Acid Spring	VPSKSGDAFQKRYFDAIQRDPAVVMEHAELARLFNSEPDVRG
Ga0242657_10336363	3300022722	Soil	MFAPSESGDAFQKKYYDAIQLDPAVVIDHAELARLFNNEPPDVSST
Ga0247688_10090741	3300024186	Soil	SEMGDGFQKQYFDAIQRDPAVVMEHAELVRLFNNEPPDAEA
Ga0247688_10143872	3300024186	Soil	SEEGDAFQKRYFTAIQRDPSVVMEHAELARLFANEPADSTP
Ga0207685_101280061	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	FQKRYFDAIQRDPTVVMEHAELAKLFANEPSDTGTM
Ga0207699_102562253	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	DGFQKQYFDAIQRDPAVVMEHAELVRLFNNEPPDAEA
Ga0207671_103761382	3300025914	Corn Rhizosphere	FQKRYFDAIQRDPAVVMVHADLAKVFANEPGEQAAS
Ga0207663_101091571	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	GDSFQKRYYDAIQRDPTVVMEHAELARLFGSEPREAENQ
Ga0207663_111722001	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	AIQKRYFDAIQRDPAVVMEHAELARLFNSEPEVRG
Ga0207686_115843982	3300025934	Miscanthus Rhizosphere	KMFAPSDVGDAFQKRYYDAIQRDPTVVMEHAELARLFLNEPLDSPP
Ga0207665_101582573	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	SGDSFQKRYYDAIQRDPTVVMEHAELARLFGSEPREAENQ
Ga0209158_12296883	3300026333	Soil	AFQKKYFDAIQRDPAVVIDHAELARLFNNEPLDSSTP
Ga0207745_10214312	3300026889	Tropical Forest Soil	APSESGDGFQKKYFDAIQRDPSVVMEHAELVRLFSNEPADSEGT
Ga0207803_10167512	3300027000	Tropical Forest Soil	QKKYFDAIQNDPAVVMEHAELVRLFNNEPGDREAE
Ga0207726_10342783	3300027045	Tropical Forest Soil	GDGFQKKYFDAIQRDPSVVMEHAELVRLFSNEPADSEGT
Ga0209332_10981902	3300027439	Forest Soil	SESGDAFQKRYFHAIQRDPTVVMEHAELAKLFANEPPDAGTM
Ga0208984_10494531	3300027546	Forest Soil	DAFQKRYFDAIQRDPAVVMEHAELARLFNSEPVEPSAT
Ga0209217_10406153	3300027651	Forest Soil	SGDGFQKKYYHAIQKDPAVVMEHAELARLFQQEPSEAEKD
Ga0209588_11185121	3300027671	Vadose Zone Soil	FVPTESGDAFQKKYFDAIQRDPAVVIDHAELARLFNNEPPDSSTP
Ga0209118_10098715	3300027674	Forest Soil	FQKKYFDAIQRDPAVVIEHAELARLFNNEPLDSSIP
Ga0209060_102593042	3300027826	Surface Soil	TGDGFQKKYYDAIQADPTVVMQHAELAKMFLNERADT
Ga0209580_105853612	3300027842	Surface Soil	DAFQKRYFDAIQRDPTVVMEHAELAKLFANEPPDTGTM
Ga0209180_100758925	3300027846	Vadose Zone Soil	FQKKYFDAIQRDPAVVIDHAELARLFNNEPPDSSTP
Ga0209180_103492722	3300027846	Vadose Zone Soil	SGDSFQKKYFDAIQLDPAVVMEHAELARLFANEPSEKDNR
Ga0209701_100215721	3300027862	Vadose Zone Soil	FQKKYFEAIQLDPAVVIEHAELARLFNNEPPDSASP
Ga0209283_100802621	3300027875	Vadose Zone Soil	FAPSESGDAFQKRYFDAIQRDPTVVMEHAELAKLFANEPSDAGTM
Ga0209590_102464301	3300027882	Vadose Zone Soil	SGDAFQKKYFDAIQRDPAVVIDHAELARLFNNEPLDSSTP
Ga0209275_101155673	3300027884	Soil	PSESGDAFQKKYYDAIQLDPAVVIDHAELARLFNNEPPDVSSQ
Ga0209624_110956342	3300027895	Forest Soil	SGDAFQKRYFDAIQRDPAVVMEHAELARLFNSEPAEPSAT
Ga0209488_103859614	3300027903	Vadose Zone Soil	VPTESGDAFQKKYFDAIQRDPAVVIDHAELARLFNNEPPDTAAP
Ga0209006_101701631	3300027908	Forest Soil	APAETGDGFQKQYFYAIQRDPAVVMEHAELVRLFNNEPPDAEG
Ga0265354_10064091	3300028016	Rhizosphere	PSESGDAFQKKYFDAIQMDPAVVIDHAELARLFNNEPPDVSSP
Ga0137415_100233341	3300028536	Vadose Zone Soil	MFAPSEFGDAFQKRYFDAIQRDPAVVMEHAELARLFANEPSDASAM
Ga0302231_104322623	3300028775	Palsa	AFQKKYFDAIQRDPAVVMDHAEMARLFNSEPGDSTTA
Ga0302303_100267355	3300028776	Palsa	TESGDAFQKKYFDAIQRDPAVVMDHAEMARLFNSEPGDSTTA
Ga0310038_102329302	3300030707	Peatlands Soil	TETGDGFQKKYFDAIQKDPAVVMEHAELVRLFHNEPLDAENQ
Ga0265745_10070272	3300030759	Soil	FQKKYFDAIQLDPAVVIDHAELARLFNNEPPDVSSP
Ga0265750_10095953	3300030813	Soil	GDAFQKKYFDAIQMDPAVVIDHAELARLFNNEPPDVSSP
Ga0265765_10231591	3300030879	Soil	SESGDAFQKKYFDAIQMDPAVVIDHAELARLFNNEPPDVSSP
Ga0075373_102071842	3300030945	Soil	TGDGFQKQYFHAIQRDPAVVMEHAELVRLFNNEPPDAEG
Ga0073994_100528541	3300030991	Soil	FAPSESGDAFQKRYFDAIQRDPAVVMEHAELARLFANEPSDASPT
Ga0073994_116543021	3300030991	Soil	QKRYFDAIQRDPTVVMEHAELAKLFANEPSDTGTM
Ga0170834_1016575602	3300031057	Forest Soil	FAPTETGDGFQKQYFDAIQRDPAVVMEHAELVRLFNNEPPDAEV
Ga0265760_100647901	3300031090	Soil	PTESGDSFQKRYYDAIQRDPAVVMEHAELARLFGNEPKDAENQ
Ga0170818_1017311431	3300031474	Forest Soil	SGDSFQKRYYDAIQKDPTVVMEHAELARLFGSEPREAENQ
Ga0318528_103142541	3300031561	Soil	SESGDGFQKKYFDAIQRDPSVVMEHAALVRLFSNAPGDSDGT
Ga0318572_104761191	3300031681	Soil	QKKYFDAIQRDPSVVMEHAALVRLFSNAPGDSDGT
Ga0307474_104604901	3300031718	Hardwood Forest Soil	FQKRYFDAIQRDPAVVIEHAELAKIFANEPGEQAAS
Ga0307477_110833132	3300031753	Hardwood Forest Soil	QKKYFDAIQRDPAVVIDHAELARLFNNEPPDSPVP
Ga0307475_101564893	3300031754	Hardwood Forest Soil	FQKRYFDAIQRDPAVVMEHAELARLFANEPSDVSPT
Ga0307473_108336133	3300031820	Hardwood Forest Soil	SGDNFQKKYFDAIQNDPAVVIEHVELAKLFNNEPPDSSAA
Ga0307473_108963761	3300031820	Hardwood Forest Soil	MFVPAESGDSFQKQYFDAIQKEPAVVMEHAELARLFNAEPPEPAAP
Ga0307478_111263872	3300031823	Hardwood Forest Soil	QKRYFDAIQRDPTVVMEHAELARLFANEPSDPGPA
Ga0306925_103759151	3300031890	Soil	ESGDGFQKKYFDAIQRDPSVVMEHAALVRLFSNAPGDSDGT
Ga0310912_103434991	3300031941	Soil	PSESGDGFQKKYFDAIQRDPSVVMEHAALVRLFSNAPGDSDGT
Ga0310916_109768901	3300031942	Soil	DGFQKKYFDAIQKDPAVVMEHAQLARLFNTEPADREPG
Ga0307479_106061222	3300031962	Hardwood Forest Soil	APSETGDGFQKQYFDAIQRDPAVVMEHAELVRLFNNEPPDAEG
Ga0307479_107873094	3300031962	Hardwood Forest Soil	FQKNYFAAIQRDPAVVIDHAELVRLFNNEPPDSSIP
Ga0307479_118418222	3300031962	Hardwood Forest Soil	FAPSESGDAFQKRYFDAIQRDPAVVMEHAELARLFANEPSDTSAT
Ga0318531_105581852	3300031981	Soil	GFQKKYFDAIQKDPAVVMEHAQLARLFNTEPADREPG
Ga0310911_104632551	3300032035	Soil	GFQKKYFDAIQRDPTVVMEHAGLVRLFLTEPGDGEK
Ga0318506_103036472	3300032052	Soil	PSERGDGFQKKYFDAIQRDPAVVMEHAELARLFQSEPQEREGE
Ga0307470_115477832	3300032174	Hardwood Forest Soil	SGDAFQKRYFDAIQRDPAVVMEHAELARLFANEPSDASAT
Ga0307471_1015592052	3300032180	Hardwood Forest Soil	TETGDGFQKQYFHAIQRDPAVVMEHAELVRLFNNEPPDAEG
Ga0307472_1013022252	3300032205	Hardwood Forest Soil	ESGDGFQKKYYDAIQTDPSVVMEHAELVRIFNTEAGEPEDA
Ga0335079_102680901	3300032783	Soil	IFAPTESGDGFQKKYFDAIQRDPAVVMEHAELARIFNNEPVDCESD
Ga0335078_110890591	3300032805	Soil	FQKKYFDAIQKDPAVVMEHAQLARMFNNEPPDRENS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F042527

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences