NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F042497

Metagenome / Metatranscriptome Family F042497

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F042497
Family Type Metagenome / Metatranscriptome
Number of Sequences 158
Average Sequence Length 47 residues
Representative Sequence MNDSGGNFADETMEMVSESANNASAELRKRRSTRIVQAVPLVVT
Number of Associated Samples 142
Number of Associated Scaffolds 158

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 91.37 %
% of genes near scaffold ends (potentially truncated) 87.97 %
% of genes from short scaffolds (< 2000 bps) 79.11 %
Associated GOLD sequencing projects 132
AlphaFold2 3D model prediction Yes
3D model pTM-score0.19

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (87.342 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(24.051 % of family members)
Environment Ontology (ENVO) Unclassified
(24.684 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(53.165 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 22.22%    β-sheet: 0.00%    Coil/Unstructured: 77.78%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.19
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 158 Family Scaffolds
PF06127Mpo1-like 74.68
PF13662Toprim_4 13.29
PF13177DNA_pol3_delta2 1.27
PF00271Helicase_C 1.27
PF00583Acetyltransf_1 1.27
PF01899MNHE 0.63
PF16868NMT1_3 0.63
PF03544TonB_C 0.63
PF02870Methyltransf_1N 0.63
PF13637Ank_4 0.63
PF02575YbaB_DNA_bd 0.63
PF12323HTH_OrfB_IS605 0.63

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 158 Family Scaffolds
COG45392-hydroxy fatty acid dioxygenase MPO1 (alpha-oxidation of fatty acids)Lipid transport and metabolism [I] 74.68
COG0350DNA repair enzyme Ada (O6-methylguanine-DNA--protein-cysteine methyltransferase)Replication, recombination and repair [L] 0.63
COG0718DNA-binding nucleoid-associated protein YbaB/EfbCTranscription [K] 0.63
COG0810Periplasmic protein TonB, links inner and outer membranesCell wall/membrane/envelope biogenesis [M] 0.63
COG1863Multisubunit Na+/H+ antiporter, MnhE subunitInorganic ion transport and metabolism [P] 0.63

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms87.34 %
UnclassifiedrootN/A12.66 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001545|JGI12630J15595_10089702All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium604Open in IMG/M
3300002562|JGI25382J37095_10200231All Organisms → cellular organisms → Bacteria604Open in IMG/M
3300002914|JGI25617J43924_10107232All Organisms → cellular organisms → Bacteria994Open in IMG/M
3300002917|JGI25616J43925_10027159All Organisms → cellular organisms → Bacteria2536Open in IMG/M
3300004080|Ga0062385_10862289All Organisms → cellular organisms → Bacteria598Open in IMG/M
3300004092|Ga0062389_103535339All Organisms → cellular organisms → Bacteria586Open in IMG/M
3300004099|Ga0058900_1375706All Organisms → cellular organisms → Bacteria583Open in IMG/M
3300004635|Ga0062388_102980101All Organisms → cellular organisms → Bacteria500Open in IMG/M
3300005175|Ga0066673_10007235All Organisms → cellular organisms → Bacteria4567Open in IMG/M
3300005181|Ga0066678_10955482All Organisms → cellular organisms → Bacteria558Open in IMG/M
3300005347|Ga0070668_101054023All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium732Open in IMG/M
3300005434|Ga0070709_10264138All Organisms → cellular organisms → Bacteria1245Open in IMG/M
3300005439|Ga0070711_102064858All Organisms → cellular organisms → Bacteria502Open in IMG/M
3300005447|Ga0066689_10555842All Organisms → cellular organisms → Bacteria725Open in IMG/M
3300005537|Ga0070730_10318880All Organisms → cellular organisms → Bacteria1015Open in IMG/M
3300005554|Ga0066661_10132996All Organisms → cellular organisms → Bacteria1512Open in IMG/M
3300005569|Ga0066705_10478637All Organisms → cellular organisms → Bacteria780Open in IMG/M
3300005586|Ga0066691_10196882All Organisms → cellular organisms → Bacteria1173Open in IMG/M
3300005598|Ga0066706_11340581All Organisms → cellular organisms → Bacteria540Open in IMG/M
3300005607|Ga0070740_10092212All Organisms → cellular organisms → Bacteria1393Open in IMG/M
3300005712|Ga0070764_10220923All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes1069Open in IMG/M
3300005952|Ga0080026_10169434All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium638Open in IMG/M
3300006050|Ga0075028_100844711All Organisms → cellular organisms → Bacteria561Open in IMG/M
3300006173|Ga0070716_101416858All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium565Open in IMG/M
3300006176|Ga0070765_101165914All Organisms → cellular organisms → Bacteria728Open in IMG/M
3300006794|Ga0066658_10693092All Organisms → cellular organisms → Bacteria562Open in IMG/M
3300006796|Ga0066665_11129430All Organisms → cellular organisms → Bacteria597Open in IMG/M
3300007265|Ga0099794_10139688All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes1226Open in IMG/M
3300007788|Ga0099795_10180348All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes882Open in IMG/M
3300009038|Ga0099829_11651730All Organisms → cellular organisms → Bacteria528Open in IMG/M
3300009088|Ga0099830_10120131All Organisms → cellular organisms → Bacteria1988Open in IMG/M
3300009088|Ga0099830_10272091All Organisms → cellular organisms → Bacteria1345Open in IMG/M
3300009088|Ga0099830_10702484All Organisms → cellular organisms → Bacteria832Open in IMG/M
3300009088|Ga0099830_10946307All Organisms → cellular organisms → Bacteria713Open in IMG/M
3300009089|Ga0099828_10748761All Organisms → cellular organisms → Bacteria876Open in IMG/M
3300009090|Ga0099827_10270054All Organisms → cellular organisms → Bacteria1433Open in IMG/M
3300009551|Ga0105238_11311158All Organisms → cellular organisms → Bacteria750Open in IMG/M
3300010303|Ga0134082_10066832All Organisms → cellular organisms → Bacteria1394Open in IMG/M
3300010321|Ga0134067_10486554All Organisms → cellular organisms → Bacteria509Open in IMG/M
3300010337|Ga0134062_10051995All Organisms → cellular organisms → Bacteria1670Open in IMG/M
3300010360|Ga0126372_11501270All Organisms → cellular organisms → Bacteria710Open in IMG/M
3300010361|Ga0126378_13302097All Organisms → cellular organisms → Bacteria513Open in IMG/M
3300010376|Ga0126381_104689488All Organisms → cellular organisms → Bacteria526Open in IMG/M
3300010857|Ga0126354_1111847All Organisms → cellular organisms → Bacteria575Open in IMG/M
3300011120|Ga0150983_10944461All Organisms → cellular organisms → Bacteria524Open in IMG/M
3300011120|Ga0150983_13139864All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium532Open in IMG/M
3300011120|Ga0150983_13303247All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium558Open in IMG/M
3300011269|Ga0137392_11103926All Organisms → cellular organisms → Bacteria650Open in IMG/M
3300011271|Ga0137393_10358935All Organisms → cellular organisms → Bacteria1245Open in IMG/M
3300011271|Ga0137393_11517120All Organisms → cellular organisms → Bacteria560Open in IMG/M
3300012096|Ga0137389_10405382All Organisms → cellular organisms → Bacteria1164Open in IMG/M
3300012189|Ga0137388_10047966All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis3446Open in IMG/M
3300012203|Ga0137399_10185795All Organisms → cellular organisms → Bacteria1680Open in IMG/M
3300012203|Ga0137399_11459403All Organisms → cellular organisms → Bacteria571Open in IMG/M
3300012210|Ga0137378_10436141All Organisms → cellular organisms → Bacteria1214Open in IMG/M
3300012356|Ga0137371_10945693All Organisms → cellular organisms → Bacteria655Open in IMG/M
3300012357|Ga0137384_10981047All Organisms → cellular organisms → Bacteria679Open in IMG/M
3300012361|Ga0137360_10713260All Organisms → cellular organisms → Bacteria861Open in IMG/M
3300012361|Ga0137360_10799147All Organisms → cellular organisms → Bacteria812Open in IMG/M
3300012361|Ga0137360_11424181All Organisms → cellular organisms → Bacteria596Open in IMG/M
3300012361|Ga0137360_11663534All Organisms → cellular organisms → Bacteria544Open in IMG/M
3300012363|Ga0137390_10077719All Organisms → cellular organisms → Bacteria3258Open in IMG/M
3300012582|Ga0137358_10284876All Organisms → cellular organisms → Bacteria1122Open in IMG/M
3300012927|Ga0137416_10449485All Organisms → cellular organisms → Bacteria1101Open in IMG/M
3300012930|Ga0137407_10784283All Organisms → cellular organisms → Bacteria899Open in IMG/M
3300012944|Ga0137410_10013819All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae5488Open in IMG/M
3300012971|Ga0126369_10099261All Organisms → cellular organisms → Bacteria2631Open in IMG/M
3300012982|Ga0168317_1041261All Organisms → cellular organisms → Bacteria1201Open in IMG/M
3300013307|Ga0157372_10969511All Organisms → cellular organisms → Bacteria985Open in IMG/M
3300015052|Ga0137411_1136997All Organisms → cellular organisms → Bacteria1461Open in IMG/M
3300015264|Ga0137403_11238914All Organisms → cellular organisms → Bacteria592Open in IMG/M
3300015264|Ga0137403_11430256All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium540Open in IMG/M
3300016319|Ga0182033_10333131All Organisms → cellular organisms → Bacteria → Proteobacteria1264Open in IMG/M
3300017823|Ga0187818_10024452All Organisms → cellular organisms → Bacteria2586Open in IMG/M
3300017933|Ga0187801_10015366All Organisms → cellular organisms → Bacteria2549Open in IMG/M
3300017955|Ga0187817_10569038All Organisms → cellular organisms → Bacteria723Open in IMG/M
3300017961|Ga0187778_10426321All Organisms → cellular organisms → Bacteria873Open in IMG/M
3300017966|Ga0187776_10152261All Organisms → cellular organisms → Bacteria1423Open in IMG/M
3300017973|Ga0187780_10161120All Organisms → cellular organisms → Bacteria1558Open in IMG/M
3300018037|Ga0187883_10444508All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium666Open in IMG/M
3300018042|Ga0187871_10622592All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium599Open in IMG/M
3300018433|Ga0066667_10007769All Organisms → cellular organisms → Bacteria → Acidobacteria4925Open in IMG/M
3300019240|Ga0181510_1119483All Organisms → cellular organisms → Bacteria547Open in IMG/M
3300019789|Ga0137408_1297326All Organisms → cellular organisms → Bacteria1136Open in IMG/M
3300020579|Ga0210407_10226163All Organisms → cellular organisms → Bacteria → Proteobacteria1456Open in IMG/M
3300020580|Ga0210403_10708398All Organisms → cellular organisms → Bacteria806Open in IMG/M
3300020583|Ga0210401_10799920All Organisms → cellular organisms → Bacteria803Open in IMG/M
3300021088|Ga0210404_10644237All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium603Open in IMG/M
3300021170|Ga0210400_10217826All Organisms → cellular organisms → Bacteria1555Open in IMG/M
3300021171|Ga0210405_10457855All Organisms → cellular organisms → Bacteria1002Open in IMG/M
3300021178|Ga0210408_11474295All Organisms → cellular organisms → Bacteria510Open in IMG/M
3300021180|Ga0210396_10031276All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae4920Open in IMG/M
3300021432|Ga0210384_10916155All Organisms → cellular organisms → Bacteria777Open in IMG/M
3300021478|Ga0210402_10792343Not Available873Open in IMG/M
3300021559|Ga0210409_10368958All Organisms → cellular organisms → Bacteria1288Open in IMG/M
3300022507|Ga0222729_1047166All Organisms → cellular organisms → Bacteria588Open in IMG/M
3300022507|Ga0222729_1075417All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium503Open in IMG/M
3300022509|Ga0242649_1054580All Organisms → cellular organisms → Bacteria570Open in IMG/M
3300022530|Ga0242658_1248990All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium502Open in IMG/M
3300022531|Ga0242660_1165379All Organisms → cellular organisms → Bacteria588Open in IMG/M
3300022531|Ga0242660_1188082All Organisms → cellular organisms → Bacteria561Open in IMG/M
3300022712|Ga0242653_1116867All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium502Open in IMG/M
3300022722|Ga0242657_1221856All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium531Open in IMG/M
3300022726|Ga0242654_10341019All Organisms → cellular organisms → Bacteria561Open in IMG/M
3300024222|Ga0247691_1022662All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes979Open in IMG/M
3300024330|Ga0137417_1015294All Organisms → cellular organisms → Bacteria661Open in IMG/M
3300026301|Ga0209238_1007963All Organisms → cellular organisms → Bacteria → Proteobacteria4202Open in IMG/M
3300026305|Ga0209688_1052358All Organisms → cellular organisms → Bacteria768Open in IMG/M
3300026310|Ga0209239_1254193All Organisms → cellular organisms → Bacteria606Open in IMG/M
3300026319|Ga0209647_1184541All Organisms → cellular organisms → Bacteria776Open in IMG/M
3300026355|Ga0257149_1019204All Organisms → cellular organisms → Bacteria928Open in IMG/M
3300026508|Ga0257161_1030027All Organisms → cellular organisms → Bacteria1065Open in IMG/M
3300026523|Ga0209808_1315928All Organisms → cellular organisms → Bacteria505Open in IMG/M
3300026551|Ga0209648_10056983All Organisms → cellular organisms → Bacteria3325Open in IMG/M
3300026551|Ga0209648_10187280All Organisms → cellular organisms → Bacteria1594Open in IMG/M
3300026552|Ga0209577_10641081All Organisms → cellular organisms → Bacteria617Open in IMG/M
3300027587|Ga0209220_1010251All Organisms → cellular organisms → Bacteria2496Open in IMG/M
3300027643|Ga0209076_1141897All Organisms → cellular organisms → Bacteria674Open in IMG/M
3300027678|Ga0209011_1154676All Organisms → cellular organisms → Bacteria643Open in IMG/M
3300027846|Ga0209180_10117380All Organisms → cellular organisms → Bacteria1525Open in IMG/M
3300027862|Ga0209701_10414682All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium748Open in IMG/M
3300028047|Ga0209526_10597556All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium707Open in IMG/M
3300030043|Ga0302306_10214848All Organisms → cellular organisms → Bacteria739Open in IMG/M
3300030053|Ga0302177_10442816All Organisms → cellular organisms → Bacteria676Open in IMG/M
3300030991|Ga0073994_11790363All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300031028|Ga0302180_10544291All Organisms → cellular organisms → Bacteria564Open in IMG/M
3300031057|Ga0170834_111280646All Organisms → cellular organisms → Bacteria851Open in IMG/M
3300031128|Ga0170823_16031319All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium513Open in IMG/M
3300031231|Ga0170824_108419804All Organisms → cellular organisms → Bacteria2496Open in IMG/M
3300031231|Ga0170824_121298004All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium647Open in IMG/M
3300031474|Ga0170818_101791527All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium704Open in IMG/M
3300031590|Ga0307483_1025574All Organisms → cellular organisms → Bacteria598Open in IMG/M
3300031753|Ga0307477_10264610All Organisms → cellular organisms → Bacteria1190Open in IMG/M
3300031754|Ga0307475_10303207All Organisms → cellular organisms → Bacteria1282Open in IMG/M
3300031823|Ga0307478_10203014All Organisms → cellular organisms → Bacteria1596Open in IMG/M
3300031894|Ga0318522_10246083All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium678Open in IMG/M
3300032180|Ga0307471_100440160All Organisms → cellular organisms → Bacteria1440Open in IMG/M
3300032756|Ga0315742_13009053All Organisms → cellular organisms → Bacteria543Open in IMG/M
3300032954|Ga0335083_10260274All Organisms → cellular organisms → Bacteria1546Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil24.05%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil18.35%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil6.96%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil5.70%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil5.70%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil3.80%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.80%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil3.16%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.53%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland2.53%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil2.53%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland1.90%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil1.90%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment1.90%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.90%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.90%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.90%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa1.90%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.27%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil1.27%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.63%
Permafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil0.63%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.63%
Weathered Mine TailingsEnvironmental → Terrestrial → Geologic → Mine → Unclassified → Weathered Mine Tailings0.63%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.63%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.63%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.63%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil0.63%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001545Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1EnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300002562Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300002914Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cmEnvironmentalOpen in IMG/M
3300002917Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cmEnvironmentalOpen in IMG/M
3300004080Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004099Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF236 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004635Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005537Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1EnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005607Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2EnvironmentalOpen in IMG/M
3300005712Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4EnvironmentalOpen in IMG/M
3300005952Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045EnvironmentalOpen in IMG/M
3300006050Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014EnvironmentalOpen in IMG/M
3300006052Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013EnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006794Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300007788Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010303Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015EnvironmentalOpen in IMG/M
3300010321Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015EnvironmentalOpen in IMG/M
3300010337Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010857Boreal forest soil eukaryotic communities from Alaska, USA - W1-3 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012982Weathered mine tailings microbial communities from Hibbing, Minnesota, USA - DCWfieldEnvironmentalOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300015052Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300017823Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3EnvironmentalOpen in IMG/M
3300017933Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1EnvironmentalOpen in IMG/M
3300017939Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MGEnvironmentalOpen in IMG/M
3300017955Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2EnvironmentalOpen in IMG/M
3300017961Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MGEnvironmentalOpen in IMG/M
3300017966Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MGEnvironmentalOpen in IMG/M
3300017973Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MGEnvironmentalOpen in IMG/M
3300018037Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10EnvironmentalOpen in IMG/M
3300018042Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300019240Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019789Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300022507Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022509Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022530Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022531Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022712Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022722Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022726Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300024222Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK32EnvironmentalOpen in IMG/M
3300024330Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300026301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026305Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)EnvironmentalOpen in IMG/M
3300026310Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026319Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)EnvironmentalOpen in IMG/M
3300026355Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-AEnvironmentalOpen in IMG/M
3300026508Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-AEnvironmentalOpen in IMG/M
3300026523Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300026552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)EnvironmentalOpen in IMG/M
3300026824Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 27 (SPAdes)EnvironmentalOpen in IMG/M
3300026868Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 32 (SPAdes)EnvironmentalOpen in IMG/M
3300026896Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 71 (SPAdes)EnvironmentalOpen in IMG/M
3300026928Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 44 (SPAdes)EnvironmentalOpen in IMG/M
3300027587Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027643Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)EnvironmentalOpen in IMG/M
3300027678Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300030043Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_1EnvironmentalOpen in IMG/M
3300030053Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2EnvironmentalOpen in IMG/M
3300030991Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031028Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031128Oak Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031590Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031679Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23EnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031833Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178EnvironmentalOpen in IMG/M
3300031894Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032051Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300032756Forest Soil Metatranscriptomics Site 2 Humus Litter Mineral Combined AssemblyEnvironmentalOpen in IMG/M
3300032954Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12630J15595_1008970213300001545Forest SoilMDDLGRNLADETGEIVSDAVVNASAELRKRRSTRIVQAVPLQV
JGIcombinedJ26739_10017752513300002245Forest SoilMDNEPHGHDLTDDTSNMPTEGAVNTGSELRKRRSTRIVQAVPLVVTGVDALG
JGI25382J37095_1020023123300002562Grasslands SoilMAAVCMNESGSNFADETREMVSEGVNNASAELRKRRSTRIVQA
JGI25617J43924_1010723213300002914Grasslands SoilMNDSGGSFADETMEMVSEGVNNASAELRKRRSTRIVQAVP
JGI25616J43925_1002715913300002917Grasslands SoilMNDSGGNLADETIEMVSERAENESTELRKRRSTRIVQAVPLVVTGVDALGRPFV
Ga0062385_1086228913300004080Bog Forest SoilMEDQGSNFADETIDMASENAMNTNNDLRKRRSTRIVQAVPLA
Ga0062389_10353533923300004092Bog Forest SoilMDDFGSSNLADETTEMAPETAVNSTSELRKRRSTRIVQAVPLQVTGVDALGRPFM
Ga0058900_137570613300004099Forest SoilMNESGGNFADETIEMISDSAANAGTELRKRRSTRIVQAVPLVVT
Ga0062388_10298010123300004635Bog Forest SoilMDDFGSSNLADETTEMAPETAVNSTSELRKRRSTRIVQAVPLQVTGVDA
Ga0066673_1000723513300005175SoilMNDPGGNFADETAEMVSESVTSASTELRKRRSTRIVQAVPLVVTGVDA
Ga0066678_1095548213300005181SoilVQSFNFAMNDFGNDIAPNSSDMVSESMTNTSTELRKRRSTRIVQAVPLVVTGVDALGRP
Ga0070668_10105402323300005347Switchgrass RhizosphereMDDLGSNLAGDTRQMETPVNTPSELRKRRSTRIVQAVPLQVTGVDA
Ga0070709_1026413813300005434Corn, Switchgrass And Miscanthus RhizosphereVFLMDDFGSNLAGDTTQMEAPVNPTSELRKRRSTRIVQAVPLQVTGVDALGRPFVE
Ga0070711_10206485823300005439Corn, Switchgrass And Miscanthus RhizosphereMNDSGGNFADETIDMVSEGVNNASAELRKRRSTRIVQAVP
Ga0066689_1055584213300005447SoilMDEQGSNLLDESGEMVPQTTPQMTPELRKRRSTRIVQAVPL
Ga0070730_1031888033300005537Surface SoilMDEFGNDLADNSPEMVSEGMTNASTELRKRRSTRIVQAVPLVVTGVDAL
Ga0066661_1013299643300005554SoilMNDPGGNFADETAEMVSESVTSASTELRKRRSTRIVQA
Ga0066705_1047863723300005569SoilMNDPGGNFADETAEMVSESVTSASTELRKRRSTRIVQAVPLVVTGVD
Ga0066691_1019688213300005586SoilMNDLSGNFADETIEMVSERAANESTELRKRRSTRIVQAVPLVVTGV
Ga0066706_1134058113300005598SoilVVYMNDSGSNFADETMEMVSENANNASAELRKRRSTRIVQAVPLLVTGVDALGR
Ga0070740_1009221213300005607Surface SoilMNDSGDFAEGTGEMLSEGAVNTSTELRKRRSTRIVQA
Ga0070764_1022092313300005712SoilMEDLGGNVAGETTEMAPETAVNPTSELRKRRSTRIVQAVPLQVTGVDALGR
Ga0080026_1016943433300005952Permafrost SoilMDDFGSNLADETTEMVPESVVNATSDLRKRRSTRIVQAVPLQVTGVDAL
Ga0075028_10084471123300006050WatershedsMNDSGGNFADESTEMVSESVTNASAELRKRRSTRIVQAVPLVVTGVDA
Ga0075029_10125465123300006052WatershedsMHDEPGGPELTDDTSEMPIEGAANTTEELRKRRSTRIVQAVPLMVTGVDALGRP
Ga0075017_10142739023300006059WatershedsMQNDDQGPEVADESSSPMTEGALNANSELRKRRSTRIVQAVPLNVTGVDALGRPFT
Ga0070716_10141685813300006173Corn, Switchgrass And Miscanthus RhizosphereMDDFGGNLADDTTEMASETASNPTSDLRKRRSTRIVQAVPLEVTG
Ga0070765_10116591413300006176SoilMDDLGRNLADPTSEMMSDAVANASAELRKRRSTRIVQ
Ga0066658_1069309223300006794SoilMNDPGGNFADETAEMVSESVTSASTELRKRRSTRIVQAVPLVVT
Ga0066665_1112943013300006796SoilMNDTGSNFADETFEMASDLGANPNADPRKRRSTRIVQPVPLVVTGVDALRRP
Ga0099794_1013968813300007265Vadose Zone SoilMAAVCMNDSGGNFADETMEMVSESANNASAELRKRRSTRIVQAVPLVVTGVDAL
Ga0099795_1018034833300007788Vadose Zone SoilMAAVCMNDSGSNFADETMEMVSENANNVSTELRKRRSTRIVQAVPLVVTGVDALGRPFVERNS
Ga0099829_1165173013300009038Vadose Zone SoilMNDSGGNYADETIEMVSDNVANPGTELRQRRSTRI
Ga0099830_1012013133300009088Vadose Zone SoilMNDSGGNLADETIEMVSERAVNDSTELRKRRSTRIVQAVPLVVT
Ga0099830_1027209113300009088Vadose Zone SoilMDDMGNNFAGEPTEIMSEGSANPATELRKRRSTRIVQAVPLQVTGVDALGRSF
Ga0099830_1070248423300009088Vadose Zone SoilMNDSGGNFADETTEMVSESVNNASAELRKRRSTRIVQAVPLVVTGVDALG
Ga0099830_1094630723300009088Vadose Zone SoilMDELSGNLADGTNEMVSETAVNPAEELRKRRSTRIVQAVPLVVTGVDALGRPFM
Ga0099828_1074876133300009089Vadose Zone SoilMDELNGNLAEGTNDMVSETAVNPAEELRKRRSTRIVQAVPLVVT
Ga0099827_1027005433300009090Vadose Zone SoilMNDSGGYADETTDMVSEGTANNTNTELRKRRSTRIVQAVPLAVT
Ga0105238_1131115823300009551Corn RhizosphereMEDVGGNVAGETIEMAPETAVNPTSELRKRRSTRIVQAVPLQVTGVDALGR
Ga0126384_1133041723300010046Tropical Forest SoilMHNEPGGPDLTDDTIDMPTEGTANANSELRKRRSTRIVQAVPLQVTGVDALGR
Ga0134082_1006683213300010303Grasslands SoilMNDASGNFADETIEMASESGVNANTEPRKRRSTRIVQAVPLSVTGVDALGRP
Ga0134067_1048655423300010321Grasslands SoilMNDSGGNFADETTGMVSDSVTSASPELRKRRSTRIVQAVPL
Ga0134062_1005199543300010337Grasslands SoilMNDPGGNFADETAEMVSESVTSPSTELRKRRSTRIVQAVPLVVTGVDA
Ga0126372_1150127023300010360Tropical Forest SoilMNDAGGGNLADEAGQMVSDNAVTPSTELRKRRSTRIVQAVPLMVTGVDALGR
Ga0126378_1330209723300010361Tropical Forest SoilMNDTSSSFADEAFEMASESGANPNTEPRKRRSTRIVQAVPLVVTGVDALGRPF
Ga0126381_10468948823300010376Tropical Forest SoilMNDSGGSFADGTSEMVSDNAVTPSTELRKRRSTRIVQAVPLVVTGVD
Ga0126354_111184713300010857Boreal Forest SoilMNDSGGNFADEAAEMVSEGAVNTSTELRKRRSTRIVQAVPLVAT
Ga0150983_1094446123300011120Forest SoilMDDFGRNLADETTEMVPETAVNPTSELRKRRSTRIVQAVPLQVT
Ga0150983_1313986413300011120Forest SoilMAAQPMDDFGSSNLADETTEMAPETAVNSTSELRKRRSTRIVQAVPLQVTG
Ga0150983_1330324713300011120Forest SoilMDDTGGDLAGEPEEMMSEGSSNPATELRKRRSTRIVQAVPLQVTGVDALGRPFV
Ga0137392_1110392613300011269Vadose Zone SoilMNDTGGNFADETIEMASESGASPNTESRKRRSTRIVQAVP
Ga0137393_1035893513300011271Vadose Zone SoilMNDSGGSFADETLDMVSESANNASAELRKRRSTRIVQAVPLVVTGVDALGRPF
Ga0137393_1151712013300011271Vadose Zone SoilMNESGGNFADGTTGMVSEGVTSASTELRKRRSTRIVQAVP
Ga0137389_1040538233300012096Vadose Zone SoilMDELGRNIAGEAGEVVPEGTVNPATELRKRRSTRIVQAVPLVVA
Ga0137388_1004796613300012189Vadose Zone SoilMNDSGGNYADETIEMVSDNVANPGTELRQRRSTRIVQAVP
Ga0137399_1018579543300012203Vadose Zone SoilMNESGGNFAEETTGMVSDSVTSASTELRKRRSTRIVQAVPLVVTGV
Ga0137399_1145940323300012203Vadose Zone SoilMDESGGNLADEAAEMVSEGALKPSTELRKRRSTRIVQAVPLVATGVDALG
Ga0137362_1001440413300012205Vadose Zone SoilMQDEPGGPNLTDETGEMPTEGAANTSEELRKRRSTRIVQAVPLMVTGVDALG
Ga0137378_1043614133300012210Vadose Zone SoilMAVVCMNDSGGNLADETIEMVSERAVNESTELRKRRSTRIV
Ga0137371_1094569313300012356Vadose Zone SoilMDDFGNDIAPNSSDMVSESMTNTSTELRKRRSTRIVQAVPLVVTGVDALGRPAEGQLAQGDE
Ga0137384_1098104723300012357Vadose Zone SoilMNDSGGNYADETIEMVSDNVANPGTELRQRRSTRIVQAVPL
Ga0137360_1071326013300012361Vadose Zone SoilMNESGGNFAEETTGMVSDSTTSAITELRKRRSTRIVQAVPLVVT
Ga0137360_1079914713300012361Vadose Zone SoilMNDSGGNFADEAAEMVSEGVVNTGTELRKRRSTRIVQAVPLMATGVDALGRP
Ga0137360_1142418123300012361Vadose Zone SoilMNDSGGNFADEAAEMVSEGTVNTSTELRKRRSTRIVQAVPLMAT
Ga0137360_1166353423300012361Vadose Zone SoilMAAVCMNDPGGNFADETMEMVSENANNASAELRKRRSTRIVQA
Ga0137390_1007771913300012363Vadose Zone SoilMIDSGGNFAEETTGMVSDSVTSASTELRKRRSTRIVQAVPLVVTGVDALG
Ga0137358_1028487613300012582Vadose Zone SoilMNDSGGNFADEAAEMVSEGAVNTSTELRKRRSTRIVQAVPLM
Ga0137416_1044948513300012927Vadose Zone SoilMDDSGGNFADGTTEMLSESVTSASTELRKRRSTRIVQAVPLVVTGVDAL
Ga0137407_1078428313300012930Vadose Zone SoilMNDSGGNFADEAAEMVSEGAANASTELRKRRSTRIVQAVPL
Ga0137410_1001381963300012944Vadose Zone SoilMNDPSGDPAGETVEMVSEGANNVSAELRKRRSTRIVQAVPLVVTGVD
Ga0126369_1009926143300012971Tropical Forest SoilMNDAGNFADETVEMASESGANPNTELRKRRSTRIVQAVP
Ga0168317_104126113300012982Weathered Mine TailingsMEELGRNLAGETAEAVSEAAASAGAELRKRRSTRIVQAV
Ga0157372_1096951113300013307Corn RhizosphereMDDLGSNLAGDTRQMETPVNTPSELRKRRSTRIVQAVPLQVTGVD
Ga0137411_113699713300015052Vadose Zone SoilMNDSGGDFAGENGEMVSESVTSVSTELRKRRSTRIVQAVPLVVKSQVSMRSG
Ga0137411_129911413300015052Vadose Zone SoilMQDEPGGPNLTDETGEMPTEGAANASEELRKRRSTRIVQAVPLMVTGVDALGRPLRSGLRR*
Ga0137403_1123891423300015264Vadose Zone SoilMDDFGNDIAANSSDMVPDGMTTASTELRKRRSTRIVQAVPLVVTGVDALGRPFVE
Ga0137403_1143025613300015264Vadose Zone SoilMDDLGSNLAGDATQMETPVNTPSELRKRRSTRIVQAVP
Ga0182033_1033313113300016319SoilMQNEEASPNLADETPHMSSDSAVNANMELRKRRSTRIVQAVPLVVTGVDALGRP
Ga0182039_1072390033300016422SoilMQNEDERPELEEETSDMHTEGAVNATTELRKRRSTRIVQAVPLVVTGVDALGRP
Ga0187818_1002445213300017823Freshwater SedimentMDESGGNYADETTEMLSENAANANTELRKRRSTRIVQAVPLVVTGVDALGRPF
Ga0187801_1001536613300017933Freshwater SedimentMDESGGNYADETTEMLSENAANASTDLRKRRSTRIVQAVP
Ga0187775_1043895113300017939Tropical PeatlandMQNEDPSPDLADDNMAMPTEGAVNPSTELRKRRSTRIVQAVPLVVTGVDAL
Ga0187817_1056903813300017955Freshwater SedimentMNDSGGNFADESTEMVSESVTNARAELRKRRSTRIVQAVPLVVT
Ga0187778_1042632133300017961Tropical PeatlandMNDAGGNFAEGTREMVSDNAVTPSTELRKRRSTRIVQAVPLMVTGV
Ga0187776_1015226113300017966Tropical PeatlandMNDSGGNFADETIEMTSESVANATTELRKRRSTRIVQAVPLVVTGVDALGRPFVE
Ga0187780_1016112033300017973Tropical PeatlandMQKESGGPDFADEASEMPIEGAANTSTELRKRRSTRIVQAVPLQVTGVDALG
Ga0187883_1044450823300018037PeatlandMDDFGSNLADETTEMVPETAVNPTSDLRKRRSTRIVQAVPLQVTGV
Ga0187871_1062259223300018042PeatlandMDDFGSNLADETTEMVPETAVNPTSDLRKRRSTRIVQAVPLQVT
Ga0066667_1000776913300018433Grasslands SoilMNDASGNFADETIEMASESGVNANTEPRKRRSTRIVQAVPLS
Ga0181510_111948323300019240PeatlandMEDLGSNVAGEATEMAPETAVNPTSELRKRRSTRIVQAVPLQVTGVDALGRPF
Ga0137408_129732633300019789Vadose Zone SoilMNDSGGNVADETMEMVSEGANNASAELRKRRSTRIVQAVPLVVTGVDALGRP
Ga0210407_1022616313300020579SoilMNDAGSNFADGPTEMVSDNAVTPSTELRKRRSTRIVQAVPLMV
Ga0210403_1070839813300020580SoilMNDSGGNFADERAEMVSEEAASANTELRKRRSTRIVQAVPLVTTG
Ga0210401_1079992013300020583SoilMDDFSGNFADETTEMVSENAANTSSELRKRRSTRIVQAVPLVVT
Ga0210404_1064423723300021088SoilMDDLGRNLADPTSEMMSDAVANASAELRKRRSTRIVQAVP
Ga0210406_1050943513300021168SoilMHDEPGGPDLTDDTSEMPIEGAANTSEELRKRRSTRIVQAVPLMVTGVDALGRP
Ga0210400_1021782653300021170SoilMNDSGGNLADGTTEVSDNAVSPSTELRKRRSTRIVQAVPLSVTGV
Ga0210405_1045785533300021171SoilMNDSGGNFADETVEMVSESANNPSAELRKRRSTRIVQAV
Ga0210408_1147429513300021178SoilVVCMNDSGGNFADETVEMVSESANNPSTELRKRRSTR
Ga0210396_1003127673300021180SoilMDDFSGNLADETTEMVSESAANTSSELRKRRSTRIVQAVPLVVTGVDALGR
Ga0210384_1091615533300021432SoilMDDFGSSNLADETTEMAPETAVNSTSELRKRRSTRIVQAV
Ga0210402_1079234323300021478SoilMLDDGGGNFADETNDMAAENLMGASELRKRRSTRIVQAVPL
Ga0210409_1036895833300021559SoilMDDFGSSNLADETTEMATETAVNSTSELRKRRSTRIVQAVPLQVTGVDAL
Ga0222729_104716613300022507SoilMSESGGDFADEIMEMVSEGANNVSAELRKRRSTRIVQAVPLVVTG
Ga0222729_107541713300022507SoilMNDAGSNFADGPTEMVSDNAVTPSTELRKRRSTRIVQAVPLMVTGVDA
Ga0242649_105458023300022509SoilMDDFSGNFADETTEMVSESAANTSSELRKRRSTRIVQAVPLVV
Ga0242658_124899013300022530SoilMDELSSNLAGETTEMAPETAVNPTSELRKRRSTRIVQAVP
Ga0242660_116537913300022531SoilMNDAGSNFADGPTEMVSDNAVTPSTELRKRRSTRIVQAVPLMVTGVDALGR
Ga0242660_118808223300022531SoilMDDFGSNLADETTEMAPESAMNPTTELRKRRSTRIVQAVPLQVTGVDALGR
Ga0242653_111686713300022712SoilMDDFGSSNLADETTEMAPETAVNSTSELRKRRSTRIVQAVP
Ga0242657_122185613300022722SoilMDDFGSSNLADEKTEMAHETAVNSTSELRKRRSTRIVQAVPLQVT
Ga0242654_1034101923300022726SoilMNDSGSNFADGPTEMVSDNAVTPSTELRKRRSTRIVQAVPLMV
Ga0247691_102266213300024222SoilMDDFGNDIAANSSDMVSEGITNTSTELRKRRSTRIVQAVPLVVTGVDALGRPFVE
Ga0137417_101529423300024330Vadose Zone SoilMNESGGNFADEAAEMVSEGAVNPSTELRKRRSTRIVQAVP
Ga0209238_100796313300026301Grasslands SoilMNDPGGNFADETAEMVSENVTSPSTELRKRRSTRIV
Ga0209688_105235823300026305SoilMNDPGGNFADETAEMVSESVTSASTELRKRRSTRIVQAVPLVVTGVDALGRPF
Ga0209239_125419323300026310Grasslands SoilMDDSGGNFADETTGMVSDSVTGASTELRKRRSTRIVQAVPL
Ga0209647_118454123300026319Grasslands SoilMNDSGGDFAGEKVEMVSESVTSVSTELRKRRSTRIVQA
Ga0257149_101920433300026355SoilMNDPGGNFADETMEMVSENANNASAELRKRRSTRIVQAVPLAVTG
Ga0257161_103002733300026508SoilMAAVCMNDPGGNFADETMEMVSENANNASAELRKRRSTRIVQAVPLAVTGVDALGRPFV
Ga0209808_131592823300026523SoilMNDTGSNFADETYEMASESGANPNAEPRKRRSTRIVQ
Ga0209648_1005698353300026551Grasslands SoilMAAVCMNDSGGSFADETMEMVSEGVNNASAELRKRRSTRIVQAVPLVV
Ga0209648_1018728013300026551Grasslands SoilVVRMNDSGGNFAGEKTEMVSESVSNASAELRKRRSTRIVQAVP
Ga0209577_1064108123300026552SoilMNDSGGNFADETTGMVSDSVTSASPELRKRRSTRIVQAVPLLV
Ga0207723_11904123300026824Tropical Forest SoilMQNEDQRPDLADETTEMSTESAVNATTELRKRRSTRIVQAVPLVVTGVDALGRPF
Ga0207818_101892123300026868Tropical Forest SoilMQNEEASPNLAGETPDMSSGSAVNANAELRKRRSTRIVQAVPLVVTGVD
Ga0207730_101381423300026896Tropical Forest SoilMQNEDERPELTDEISDMPTEGAVNATTELRKRRSTRIVQAVPLVVTGVDALGRP
Ga0207779_104387723300026928Tropical Forest SoilMPNDDRGPDIVDESSAHMTESALNASTELRKRRSTRIVQAVPLNVTGVDALGRP
Ga0209220_101025153300027587Forest SoilMNDSGGDFADETTEMVSESVTSASTELRKRRSTRIVQAVPLAVT
Ga0209076_114189723300027643Vadose Zone SoilMNESGGNFADEAAEMVSEGAVNPSTELRKRRSTRI
Ga0209011_115467623300027678Forest SoilMNDSGGNFADEAAEMVSEGAVNTSTELRKRRSTRIVQAVPLVATGVDALGRPFV
Ga0209180_1011738033300027846Vadose Zone SoilMDDMGNNFAGEPTEIMSEGSANPATELRKRRSTRIVQAVPLQVTGVD
Ga0209701_1041468213300027862Vadose Zone SoilMDDMGNNFAGEPTEIMSEGSANPATELRKRRSTRIVQAVPLQVTGVDALG
Ga0209526_1059755623300028047Forest SoilMDDFGGNLADDTTEMASETASNPASDLRKRRSTRIVQAVPLEVTGVDALGRPFM
Ga0302306_1021484813300030043PalsaMDELGNHVAGETTEATPTGVTSTSSELRKRRSTRIVQAVPLQVTGVDALGRP
Ga0302177_1044281613300030053PalsaMEDLGGNFADETTDMENAMSASTELRKRRSTRIVQAVPLAVTGVD
Ga0073994_1179036313300030991SoilMLDDGGGNFADETNDMAAENLMGASELRKRRSTRIVQAVPLAVTG
Ga0302180_1054429113300031028PalsaMEDLGGNFADETTDMENAMSASTELRKRRSTRIVQAVPLAVTGVDALG
Ga0170834_11128064633300031057Forest SoilMDDFGRNLADETTEMVPETAVNPTSELRKRRSTRIVQAVPLQ
Ga0170823_1603131913300031128Forest SoilMDDTGGDLAGEPEEMMSEGSPNPATELRKRRSTRIVQA
Ga0170824_10841980413300031231Forest SoilMDDFGRNLADETTEMVPETAVNPTSELRKRRSTRIVQAVP
Ga0170824_12129800413300031231Forest SoilMDDFGGNLADETTEMASEAAANPSSDLRKRRSTRIVQA
Ga0170818_10179152733300031474Forest SoilMDDFGGNLADETTEMASEAAANPSSDLRKRRSTRIVQAVPLEIT
Ga0307483_102557413300031590Hardwood Forest SoilMNDSGGNFADETVEMVSESANNPSAELRKRRSTRIVQAVPLVVTGVDALG
Ga0318561_1077221323300031679SoilMQNEEESPDLADESADMPTEGALNAGTELRKRRSTRIVQAVPLVVTGVDALGRPFA
Ga0307477_1026461033300031753Hardwood Forest SoilMNDSGGNFADETVEMVSESANNPSAELRKRRSTRI
Ga0307475_1030320713300031754Hardwood Forest SoilMSESGGNFADETTEMVSESATNPGAELRKRRSTRIVQA
Ga0307478_1020301413300031823Hardwood Forest SoilMNDSGGNFADETVEMVSESANNPSAELRKRRSTRIVQ
Ga0310917_1089804513300031833SoilMQNEEHRRELAEETTEMPSDSAANPTTELRKRRSTRIVQAVPLVVTGVDA
Ga0318522_1024608313300031894SoilMQNEEASPNLAGETPDMSSDSAVNANAELRKRRSTRIVQAVPLVVTGVDALGRPF
Ga0307479_1008977913300031962Hardwood Forest SoilMHEEPGGPEQTDETSEMPIEGAANTTEELRKRRSTRIVQAVPLQVTGVDALGRPF
Ga0306922_1026868613300032001SoilMQNEDQRPDLADETIEMSTESAVNATTELRKRRSTRIVQAVPLVVTGVDALGRPF
Ga0318532_1015385213300032051SoilMQNEEASPNLAGETPDMSSDSAVNANAELRKRRSTRIVQAVPLVVTGVDA
Ga0307471_10044016033300032180Hardwood Forest SoilMNDSGGNFADETMEMVSESANNASAELRKRRSTRIVQAVPLVVT
Ga0306920_10420151623300032261SoilMQNEEASPNLAGETPDMSSDSAVNANAELRKRRSTRIVQAVPLVVTGVDALGRPFA
Ga0315742_1300905313300032756Forest SoilVCMNDSGGNFADETTEMVSESVTNPSTELRKRRSTRIVQAVPLSVSGVDALGRP
Ga0335083_1026027443300032954SoilMEDLGGKVAGETTEMAPETAVNPTSELRKRRSTRIVQAVPLQVTGVDALGRP

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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