Metagenome / Metatranscriptome Family F042495

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F042495
Family Type	Metagenome / Metatranscriptome
Number of Sequences	158
Average Sequence Length	49 residues
Representative Sequence	PLEIGRRGFAAQIAVDALIIDIEFARYVFGVFVRGIGHGFFPKNEVER
Number of Associated Samples	112
Number of Associated Scaffolds	158

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	61.39 %
% of genes from short scaffolds (< 2000 bps)	59.49 %
Associated GOLD sequencing projects	112
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (67.722 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (41.139 % of family members)
Environment Ontology (ENVO)	Unclassified (48.734 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.101 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.05% β-sheet: 0.00% Coil/Unstructured: 53.95%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 158 Family Scaffolds
PF01925	TauE	44.30
PF08543	Phos_pyr_kin	5.06
PF00582	Usp	3.16
PF12706	Lactamase_B_2	2.53
PF00535	Glycos_transf_2	1.90
PF13483	Lactamase_B_3	1.90
PF00486	Trans_reg_C	0.63
PF14622	Ribonucleas_3_3	0.63
PF01850	PIN	0.63

COG ID	Name	Functional Category	% Frequency in 158 Family Scaffolds
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	44.30
COG0351	Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase	Coenzyme transport and metabolism [H]	5.06
COG0524	Sugar or nucleoside kinase, ribokinase family	Carbohydrate transport and metabolism [G]	5.06
COG2240	Pyridoxal/pyridoxine/pyridoxamine kinase	Coenzyme transport and metabolism [H]	5.06
COG2870	ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase	Cell wall/membrane/envelope biogenesis [M]	5.06

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	67.72 %
Unclassified	root	N/A	32.28 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	67.72 %
Unclassified	root	N/A	32.28 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	67.72 %
Unclassified	root	N/A	32.28 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	65.19 %
Unclassified	root	N/A	32.28 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	65.19 %
Unclassified	root	N/A	32.28 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.28 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	21.52 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	5.06 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	3.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.28 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	21.52 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	5.06 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	3.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.28 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	21.52 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	5.06 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	2.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.28 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	21.52 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	5.06 %
Pedosphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera	2.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.28 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	9.49 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	5.06 %
Pedosphaera parvula	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	2.53 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000559\|F14TC_100868991	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	786	Open in IMG/M
3300000881\|JGI10215J12807_1194520	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1583	Open in IMG/M
3300004156\|Ga0062589_100178627	All Organisms → cellular organisms → Bacteria	1501	Open in IMG/M
3300004157\|Ga0062590_101627767	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	654	Open in IMG/M
3300004643\|Ga0062591_101562687	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	663	Open in IMG/M
3300005167\|Ga0066672_10155507	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1436	Open in IMG/M
3300005180\|Ga0066685_10041630	All Organisms → cellular organisms → Bacteria	2915	Open in IMG/M
3300005186\|Ga0066676_10088511	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1854	Open in IMG/M
3300005447\|Ga0066689_10487209	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	777	Open in IMG/M
3300005451\|Ga0066681_10119404	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1525	Open in IMG/M
3300005552\|Ga0066701_10273268	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1046	Open in IMG/M
3300005552\|Ga0066701_10407852	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	841	Open in IMG/M
3300005553\|Ga0066695_10577453	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	678	Open in IMG/M
3300005556\|Ga0066707_10788195	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	588	Open in IMG/M
3300005574\|Ga0066694_10123244	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1221	Open in IMG/M
3300005576\|Ga0066708_10540866	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	750	Open in IMG/M
3300006028\|Ga0070717_12114421	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	506	Open in IMG/M
3300006046\|Ga0066652_101036878	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	778	Open in IMG/M
3300006796\|Ga0066665_10259014	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1380	Open in IMG/M
3300006796\|Ga0066665_10975021	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	652	Open in IMG/M
3300009012\|Ga0066710_102403078	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	764	Open in IMG/M
3300009038\|Ga0099829_11412273	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	575	Open in IMG/M
3300009137\|Ga0066709_100182663	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2732	Open in IMG/M
3300009137\|Ga0066709_102691576	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	663	Open in IMG/M
3300009545\|Ga0105237_12065076	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	579	Open in IMG/M
3300010301\|Ga0134070_10013611	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2586	Open in IMG/M
3300010303\|Ga0134082_10096686	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1166	Open in IMG/M
3300010303\|Ga0134082_10442052	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	561	Open in IMG/M
3300010320\|Ga0134109_10095431	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1030	Open in IMG/M
3300010320\|Ga0134109_10195881	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	744	Open in IMG/M
3300010320\|Ga0134109_10386076	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	557	Open in IMG/M
3300010320\|Ga0134109_10440298	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	528	Open in IMG/M
3300010325\|Ga0134064_10028061	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1637	Open in IMG/M
3300010335\|Ga0134063_10029566	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2317	Open in IMG/M
3300010337\|Ga0134062_10105898	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1212	Open in IMG/M
3300010868\|Ga0124844_1297442	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	547	Open in IMG/M
3300012189\|Ga0137388_11155702	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	711	Open in IMG/M
3300012198\|Ga0137364_10329435	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	1137	Open in IMG/M
3300012198\|Ga0137364_10456036	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	959	Open in IMG/M
3300012198\|Ga0137364_11058783	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	611	Open in IMG/M
3300012199\|Ga0137383_10968504	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	620	Open in IMG/M
3300012199\|Ga0137383_11342290	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	508	Open in IMG/M
3300012201\|Ga0137365_10293256	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1206	Open in IMG/M
3300012202\|Ga0137363_10204814	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1584	Open in IMG/M
3300012205\|Ga0137362_10310502	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	1365	Open in IMG/M
3300012205\|Ga0137362_10617876	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	934	Open in IMG/M
3300012207\|Ga0137381_10549948	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	1007	Open in IMG/M
3300012207\|Ga0137381_10732230	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	859	Open in IMG/M
3300012207\|Ga0137381_11358517	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	603	Open in IMG/M
3300012208\|Ga0137376_11229337	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	639	Open in IMG/M
3300012211\|Ga0137377_10271083	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1629	Open in IMG/M
3300012211\|Ga0137377_11363514	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	638	Open in IMG/M
3300012211\|Ga0137377_11886031	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	515	Open in IMG/M
3300012285\|Ga0137370_10107242	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1579	Open in IMG/M
3300012285\|Ga0137370_10471695	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	766	Open in IMG/M
3300012285\|Ga0137370_10573067	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	696	Open in IMG/M
3300012350\|Ga0137372_10420589	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1008	Open in IMG/M
3300012350\|Ga0137372_10461423	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	951	Open in IMG/M
3300012350\|Ga0137372_10657379	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	763	Open in IMG/M
3300012351\|Ga0137386_10489466	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	886	Open in IMG/M
3300012353\|Ga0137367_10667173	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	725	Open in IMG/M
3300012354\|Ga0137366_10080671	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2475	Open in IMG/M
3300012354\|Ga0137366_10601983	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	788	Open in IMG/M
3300012354\|Ga0137366_10625381	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	771	Open in IMG/M
3300012356\|Ga0137371_10123640	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2021	Open in IMG/M
3300012356\|Ga0137371_10484657	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	955	Open in IMG/M
3300012356\|Ga0137371_10592971	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	852	Open in IMG/M
3300012357\|Ga0137384_10405943	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	1125	Open in IMG/M
3300012357\|Ga0137384_10928046	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	701	Open in IMG/M
3300012358\|Ga0137368_10177723	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	1539	Open in IMG/M
3300012359\|Ga0137385_11456239	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	548	Open in IMG/M
3300012360\|Ga0137375_10942945	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	683	Open in IMG/M
3300012361\|Ga0137360_10786083	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	819	Open in IMG/M
3300012362\|Ga0137361_10074110	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2893	Open in IMG/M
3300012362\|Ga0137361_10157454	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2035	Open in IMG/M
3300012362\|Ga0137361_10408954	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1246	Open in IMG/M
3300012582\|Ga0137358_10533014	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	790	Open in IMG/M
3300012582\|Ga0137358_10832956	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	610	Open in IMG/M
3300012685\|Ga0137397_10101396	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2110	Open in IMG/M
3300012685\|Ga0137397_11043570	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	599	Open in IMG/M
3300012900\|Ga0157292_10295286	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	580	Open in IMG/M
3300012918\|Ga0137396_11303716	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	504	Open in IMG/M
3300012923\|Ga0137359_10812878	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	809	Open in IMG/M
3300012923\|Ga0137359_11141079	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	666	Open in IMG/M
3300014157\|Ga0134078_10322284	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	671	Open in IMG/M
3300014166\|Ga0134079_10076744	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1232	Open in IMG/M
3300015077\|Ga0173483_10507500	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	644	Open in IMG/M
3300015374\|Ga0132255_106369095	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	500	Open in IMG/M
3300016341\|Ga0182035_12037353	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	522	Open in IMG/M
3300016445\|Ga0182038_10191554	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1601	Open in IMG/M
3300018431\|Ga0066655_10045106	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2240	Open in IMG/M
3300018433\|Ga0066667_10067298	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2247	Open in IMG/M
3300018433\|Ga0066667_10649671	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	882	Open in IMG/M
3300018468\|Ga0066662_10777739	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	925	Open in IMG/M
3300018468\|Ga0066662_11734303	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	653	Open in IMG/M
3300019875\|Ga0193701_1018830	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1404	Open in IMG/M
3300019890\|Ga0193728_1165871	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	958	Open in IMG/M
3300020022\|Ga0193733_1035674	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1404	Open in IMG/M
3300020027\|Ga0193752_1169012	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300021363\|Ga0193699_10171358	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
3300022534\|Ga0224452_1190079	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	631	Open in IMG/M
3300026306\|Ga0209468_1005422	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	4977	Open in IMG/M
3300026548\|Ga0209161_10036974	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	3311	Open in IMG/M
3300026550\|Ga0209474_10422925	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	685	Open in IMG/M
3300028771\|Ga0307320_10188506	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	805	Open in IMG/M
3300030777\|Ga0075402_12005705	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	784	Open in IMG/M
3300032180\|Ga0307471_102957967	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	603	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.47%
Host-Associated	Host-Associated	2.53%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.84%
Plants	Host-Associated → Plants	2.53%
Aquatic	Environmental → Aquatic	0.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.84%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.27%
Sediment	Environmental → Aquatic → Sediment	0.63%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.63%
Roots	Host-Associated → Plants → Roots	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	91.77%
Loam	Environmental → Terrestrial → Soil → Loam	5.06%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.27%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.63%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	61.39%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	24.68%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.80%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.90%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.90%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.27%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.63%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.63%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	41.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	18.35%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	11.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.70%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.70%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.27%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.27%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.27%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.63%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.63%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.63%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.63%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.63%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.63%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.63%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.63%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2170459009	Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cm	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000881	Soil microbial communities from Great Prairies - Wisconsin Restored Prairie soil	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012900	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019875	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020015	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m1	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300020027	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c1	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300030777	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB5 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030847	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030855	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA9 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_03712940	2088090014	Soil	XXXFAAQIAIDTLIIDIEFARYVFGVFVRDIGHGFFP
F47_11339090	2170459009	Grass Soil	FAAQIAVDALIVDVEFSCYVFGVFVCDLSHSFYGKGEVQC
F14TC_1007323001	3300000559	Soil	AQIAVDALVIDVEFSRYVFGVFVCDVGHSFYGKSEIQH*
F14TC_1008689913	3300000559	Soil	AAVIVPFEIRRGGFAAQIAIDALIIDIEFARHVFGVFVRDVSHDFFPKNEVER*
JGI10215J12807_11945201	3300000881	Soil	VVPLEIGRRGFAAQIAVDALIIDIEFAWYVFGVFVRGICHGFFSKKEVER*
Ga0062589_1001786273	3300004156	Soil	LEIGRRGFAAQIAVDALIIDIEFAWYVFGVFVRGICHGFFSKKEVER*
Ga0062590_1016277671	3300004157	Soil	PLEIGGRGFTAQIAIDALVVDVEFALYVFGVFVRDIGHDFFP*
Ga0062591_1015626872	3300004643	Soil	PLEIGRRGFAAQIAVDALIIDIEFAWYVFGVFVRGICHGFFSKKEVER*
Ga0066672_101555073	3300005167	Soil	GMAAVIVPFEIRGRGFAAQVAIDTLIIDIEFARYVFGVFVRDIGHGFFRKNEVER*
Ga0066673_100469124	3300005175	Soil	AAQVAIDTLIIDIEFARYVFGVFVRDIGHGFFRKNEVER*
Ga0066679_104683683	3300005176	Soil	FAAQIAVDALIVDVEFARYVFGVFIRGIGHGFSGKSEGER*
Ga0066688_102843113	3300005178	Soil	GFAAQIAVDALVIDIEFAGYVFGVFVCDIGHSLSRKNEVQR*
Ga0066684_106000253	3300005179	Soil	RGFAAQVAIDTLIIDIEFARYVFGVFVRDIGHGFFRKNEVER*
Ga0066685_100416301	3300005180	Soil	VPFEIRGRGFAAQVAIDTLIIDIEFARYVFGVFVRDIGHGFFRKNEVER*
Ga0066685_108464992	3300005180	Soil	TTQIAVDTLIIYVEFARYVFSVFVRDISHSLPGKSEVER*
Ga0066671_100014741	3300005184	Soil	EIGRRGFTAQIAVDALIIDVKFARYVLGVFVCGIGHGFPVK*
Ga0066676_100885111	3300005186	Soil	RRLWLFINVGMAAVIVPLEIGRRGFAAQIAIDTLIIDIEFARYILGVFVRDIGHGFFRKNEVER*
Ga0066689_104872093	3300005447	Soil	MAAIIVPLEVGGRGLAAQIAVDALVIDIEFAGYVFGVFVCDIGHSLSRKNEVQR*
Ga0066682_103462162	3300005450	Soil	RGFAAQIAIDALIIDIEFARDVFGVFVRGIGHGFFPKNEVER*
Ga0066681_101194043	3300005451	Soil	MTAVIVPFEIGRRGFPAQIAIDALIINVEFARYVFGVFVRSVGHRLFA*
Ga0066701_102732681	3300005552	Soil	MAAIIVPLEVGGRGLAAQIAVDALVIDVEFARYVFGVFVCDIGHSLSRKNEGER*
Ga0066701_104078523	3300005552	Soil	MAAVIVPFEIRGRGFAAQVAIDTLIIDIEFARYVFGVFVRDIGHGFFRKNEVER*
Ga0066695_105774531	3300005553	Soil	MAAIVVTFEIGGRGFAAQIAVDTLIIDVEFARYVFGVFVRDIGHGLPGKSEVE
Ga0066692_108378931	3300005555	Soil	GRGLAAQIAVDALVIDIEFAGYVFGVFVCDIGHSLSRKNEVQR*
Ga0066707_107881952	3300005556	Soil	MAAIVIALEIGRRSFAAQIAIDALIIDIEFARYVFGVFVCSISHSFSVKGS*
Ga0066698_102645011	3300005558	Soil	IDALIIDIEFARYVFGVFVRDIGHGFFRKNEVER*
Ga0066694_101232443	3300005574	Soil	IVSFEIGGRGFAAQIAIDALIIYVEFAGDVLGVFVCGVGHDFSVKNEGKG*
Ga0066708_105408662	3300005576	Soil	MAAVIVSFEIGGRGFAAQIAVDALIIYVEFAGDVLGVFVCGVGHDFSVKNEGEG*
Ga0066903_1090925812	3300005764	Tropical Forest Soil	RFSAQIAVDALIIDVECPRYVFGVFVCDVGHSFYGKSELQH*
Ga0070717_121144212	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	GMAAVIVPLEIGGRCFTAQIAVDALVIYIEFARYVLGVFVRGVGHGFSVKNEEER*
Ga0066652_1010368781	3300006046	Soil	MAAVVVPLEVRRRCFAAQIAVDALVIDVEFTGYVFGVFVCGIGHGF
Ga0070716_1014843273	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	AQIAIDALVIDIEFPRYVFGVFVCNVGHGFPRKSEVER*
Ga0066665_102590141	3300006796	Soil	IVPFEIRGRGFAAQVAIDTLIIDIEFARYVFGVFVRDIGHGFFRKNEVER*
Ga0066665_109750211	3300006796	Soil	VIPLEIGRRSLTTQIAVDTLIIYVEFARYVFSVFVRDISHSLPGKSEVER*
Ga0066710_1024030783	3300009012	Grasslands Soil	MAAIIVPLEVGGRGLAAQIAVDALVIDIEFAGYVFGVFVCDIGHSLSRKNEVQR
Ga0099829_114122731	3300009038	Vadose Zone Soil	RLFVNVGVAAVVIAFEIGGCGLAAQIAVDALIIDVEFPRYVFGVFVRGIGHSFFGKSEVEC*
Ga0066709_1001826635	3300009137	Grasslands Soil	MTAVIVPFEIGRRGFPAQIAIDALIINVEFARYVFGVFVRGVGHGFSVKNEGER*
Ga0066709_1026915763	3300009137	Grasslands Soil	VIIPLEVCGRGFAAQIAVDALIIDVEFARYVLGVFVCGISHDFFSKIEAER*
Ga0075423_114883291	3300009162	Populus Rhizosphere	IAVDALIVYVEFAWYVLGVFVCGIGHGFSVKNEGER*
Ga0105237_120650762	3300009545	Corn Rhizosphere	AAVVVPLEIGRRGFAAQIAIDALIIDIEFAWYVFGVFVRGICHGFFSKKEVER*
Ga0126308_113140721	3300010040	Serpentine Soil	AQIAVDALIIDIEFARYVFDVFVRGIGHGFFPKNEVEG*
Ga0134070_100136114	3300010301	Grasslands Soil	FFAEALFLRRLWLFIDVRMAAVVVSLEIGGRGFAAQIAVDALIIDVKLARYVFGVFVRGVGHDFPVKSEAER*
Ga0134082_100966863	3300010303	Grasslands Soil	LFIDVGMTAVIVPFEIGRRGFPAQIAIDALIINVEFARYVFGVFVRSVGHRPFA*
Ga0134082_104420521	3300010303	Grasslands Soil	IGGRGLPAQIAVDALIVDVEFSRYVFGVFVGGIGHSFPGKSEAER*
Ga0134109_100954311	3300010320	Grasslands Soil	FIDVRMAAVIVPLEIGGRCFTAQIAVDALVIYIEFAGHVFGVFVCGIGHGFPVK*
Ga0134109_101958813	3300010320	Grasslands Soil	VPFEIGRRGFPAQIAIDALIINVEFARYVFGVFVRSVGHRLFA*
Ga0134109_103860762	3300010320	Grasslands Soil	AAIIVALEIGRSCFAAQIAIDALIIDIEFARYVLRVFVRGIGHGFR*
Ga0134109_104402982	3300010320	Grasslands Soil	LEIGGRGFAAQIAVDALIIDVEFARYVLGVFVCGVGHDFFS*
Ga0134086_100030451	3300010323	Grasslands Soil	IAVDALIVDVEFSRYVFGVFVGGIGHSFPGKSEVER*
Ga0134086_103319011	3300010323	Grasslands Soil	IDALIINVEFAWYVFGVFVRSIGHGFSLKSEGKR*
Ga0134064_100280614	3300010325	Grasslands Soil	EIGGRGFAAQIAVDALIIDVKLARYVFGVFVCGVGHDFSVKNEGEG*
Ga0134063_100295661	3300010335	Grasslands Soil	IVPLEIGGRGFTAQIAVDALIIDVKFARYVFGVFVCGIGHGFPVK*
Ga0134071_102966523	3300010336	Grasslands Soil	VPLEVGGRGLAAQIAVDALIIDVEFARYVFGVFVCGIGHGFP*
Ga0134062_101058981	3300010337	Grasslands Soil	IVPLKVCGCGFAAQIAVDALIVDVEFSRYVFGVFVGGIGHSFPGKSEAER*
Ga0126377_115411251	3300010362	Tropical Forest Soil	QIAVDALIVDVEFSRYVFGVFVCDVGHSFYGKSEIQH*
Ga0126377_131858822	3300010362	Tropical Forest Soil	AFEIGRRRFPAQIAVDALIIDVKFARYVLGVFVRGVGHGFSGKSEVER*
Ga0134128_113478043	3300010373	Terrestrial Soil	AAQIAVDALIIDIEFAWYVFGVFVRGICHGFFSKKEVER*
Ga0126381_1024704511	3300010376	Tropical Forest Soil	IAIDALIIDIKFARYVFGVFVRGVGHGFSPKSERER*
Ga0124844_12974422	3300010868	Tropical Forest Soil	RLLIDVGMAAVIVPFEIGRRGFAAQIAVDALVIDVEFAWYVFGVFVRDIGHGFFQKNEVEG*
Ga0137393_107061551	3300011271	Vadose Zone Soil	TLKIGGRSFAAQIAVDALIIDVEFARYVFSIFVRSVGHG*
Ga0137388_100520741	3300012189	Vadose Zone Soil	KIGGRSFAAQIAVDALIIDVEFARYVFSIFVRNVGHG*
Ga0137388_111557023	3300012189	Vadose Zone Soil	TAVIVPFEIGRRGFPAQIAIDALIINVEFARYVFGVFVRSVGHRLFA*
Ga0137364_100497265	3300012198	Vadose Zone Soil	FAAQVAIDTLIIDIEFARYVFGVFVRDIGHGFFRKNEVER*
Ga0137364_103294351	3300012198	Vadose Zone Soil	FLRRLWLFVNVGMAAVIVPFEIGGRGLAAQIAVDALIIDVEFARYVFGVFVCGISHGFP*
Ga0137364_104560363	3300012198	Vadose Zone Soil	AAVVVSLEIGGRGFAAQIAVDALIIDVKLAWYVFGVFVRGVGHDFPVKSEAER*
Ga0137364_106069073	3300012198	Vadose Zone Soil	AQIAVDTLIIDVEFARYVFGVFVRDIGHGLPGKSEVER*
Ga0137364_110587832	3300012198	Vadose Zone Soil	LFVDEGMATVVVALEIGGGGFATEIAVDALIVDVEFARYVFGVFVRYISHGFPGKSEVER
Ga0137383_109685042	3300012199	Vadose Zone Soil	GGRGFAAQIAVDALIIDVKLAWYVFGVFVRGVGHDFPVKSEAER*
Ga0137383_113422901	3300012199	Vadose Zone Soil	FFRRLRLFIDVGMAAVVVPLEIGGRGFAAQIAIDALIIDIEFARDVFGVFVRGIGHGFFPKNEVER*
Ga0137382_101034221	3300012200	Vadose Zone Soil	QIAIDALIIDIEFARYVFGVFVRGIGHGFFPKNEVER*
Ga0137365_102932563	3300012201	Vadose Zone Soil	FAESLFLRRLRLFIDVGMATVIVPLEIRGRGFAAQIAVDALIIDVEFARYVFGVFVCDIGHGFPSKK*
Ga0137365_106347441	3300012201	Vadose Zone Soil	QIAVDALIIDVECPRYVFGVFVCDVGHSFYGKSEIQH*
Ga0137365_107862323	3300012201	Vadose Zone Soil	FAAQIAVDTLIIDVEFARYVFRVLVCDIGHGLPGKSEVER*
Ga0137363_102048142	3300012202	Vadose Zone Soil	MAAVIVPFEIRGRGFAAQVAIDTLIIDIEFARYVFGVFVRDIGHGFFRKNAVER*
Ga0137362_103105023	3300012205	Vadose Zone Soil	AIVVALEIGRRSFAAQIAVDALIIDVEFAFYVFGIFVRGIGHSFSGKSEGER*
Ga0137362_106178763	3300012205	Vadose Zone Soil	AVVVPLEVRRRCFAAQIAVDALVIDVEFTGYVFGVFVCGIGHGFSRKNEVEC*
Ga0137381_105499481	3300012207	Vadose Zone Soil	LFLRRLWLFIDVGMAAVVVSLEIRGRGFAAQIAVDALIIDVKRARYVFGVFVRGVGHDLFP*
Ga0137381_107322303	3300012207	Vadose Zone Soil	ALRLFIDVGMAAVIVALEIGGCGFTAQIAVDALIIDVEFSLYVFGVFIRGISHSFSGKSEAEVRKK*
Ga0137381_113585172	3300012207	Vadose Zone Soil	CLWLFIDVGMAAVIVSFEIGGRGFAAQIAVDALIIYVEFAGDVLGVFVCGVGHDFSVKNEGEG*
Ga0137376_112293372	3300012208	Vadose Zone Soil	FFRRLRLLVNVGVAAIVVALEIGGRSFAAQIAVDALIIDIEFAFYVFGVFVRGIGHSFSGKSEGER*
Ga0137379_109792003	3300012209	Vadose Zone Soil	LTAQIAVDTLIIDVEFARYVFGVLVCDIGHGLSRKGEVER*
Ga0137377_102710832	3300012211	Vadose Zone Soil	MAAVIVPFEIRGRGFAAQVAIDTLIIDIEFARYVFGVFVSDIGHGFFRKNEVER*
Ga0137377_113635142	3300012211	Vadose Zone Soil	IIPLEVCGRGFAAQIAVDALIIDVEFAFYVFGVFVRGIGHGFSGKSEGER*
Ga0137377_118860311	3300012211	Vadose Zone Soil	MAAVIVPFEIGGRGLAAQIAVDALIIDVEFARYVFGVFVCDIGHSLSRKNEVER*
Ga0137370_101072421	3300012285	Vadose Zone Soil	IRGRGFAAQVAIDTLIIDIEFARYVFGVFVRDIGHGFFRKNEVER*
Ga0137370_104716952	3300012285	Vadose Zone Soil	MAAVIVPFEIRGRGFAAQVAIDTLIIDIEFARYVFGVFVSDIGHGFFRKNEVEG*
Ga0137370_105730672	3300012285	Vadose Zone Soil	AQPFFFRRFRLLINVGMTAVVVPLKIRRRGLPAQIAVDALIIDVEFACYVFSVFVRGIGHSFSGKSEGER*
Ga0137370_108286411	3300012285	Vadose Zone Soil	TAQIAVDTLIIDVEFAFDVFGIFVRDIGHGLFGKSEVER*
Ga0137370_110029181	3300012285	Vadose Zone Soil	TQVAINTLIIDIEFARYVFGVFVRDIGHGFSQKNEVER*
Ga0137387_108684072	3300012349	Vadose Zone Soil	VVTLKIGGRSFAAQIAVDALIIDVEFARYVFSIFVRNVGHG*
Ga0137372_104205892	3300012350	Vadose Zone Soil	MAAVIVPLEIGGRRFTAQIAVDALIIDVKFARYVFGVFVCGIGHGFSLKSEGE
Ga0137372_104614231	3300012350	Vadose Zone Soil	PLEVCGRGFAAQIAVDALIIDVEFARYVLGVFVCGVGHDFFA*
Ga0137372_106573791	3300012350	Vadose Zone Soil	PLEVCGRGFAAQIAVDALIIDVEFARYVLGVFVCGVGHDFFPKIEAER*
Ga0137386_104894661	3300012351	Vadose Zone Soil	LFLRRFWLFIDIRMAAIIVPLEVGGRGLAAQIAVDALIIDVKFARYVFGVFVCSISHGFP
Ga0137367_106671733	3300012353	Vadose Zone Soil	IPLEIGGRGFAAQIAVDALIIDVEFARYVLGVFVCGVGHDFFP*
Ga0137366_100806714	3300012354	Vadose Zone Soil	VGMAAVIVPFEIRGRGFAAQVAIDTLIIDIEFARYVFGVFVSDIGHGFFRKNEVER*
Ga0137366_106019831	3300012354	Vadose Zone Soil	VGMAAVIVPFEIRGRGFAAQVAIDTLIIDIEFARYVFGVFVRGVGHGFFPKK*
Ga0137366_106253811	3300012354	Vadose Zone Soil	IGRRGFAAQIAIDALIIDIEFARYVFGVFVRDIGHGFFPKMKWNVPSAK*
Ga0137371_100457911	3300012356	Vadose Zone Soil	TQIAIDALIIDVECPRYVFGVFVCDVGHSFYGKSEIQH*
Ga0137371_101236404	3300012356	Vadose Zone Soil	MAAVIVPLEIGGRGFTAQIAVDALIIDVKFARYVFGVFVCGIGHGFSLKSEGE
Ga0137371_104846573	3300012356	Vadose Zone Soil	LRRLWLFIDVGMAAVVVSLEIGGRGFAAQIAVDALIIDVKRARYVFGVFVRGVGHDLFP*
Ga0137371_105929712	3300012356	Vadose Zone Soil	LRRLWLFIDVGMAAVVVSLEIGGRGFAAQIAVDALIIDVKLARYVFGVFVRGVGHDFPVKSEAER*
Ga0137384_104059433	3300012357	Vadose Zone Soil	FAERFFFRGLRLLVNVGMAAIVVALEIGRRSFAAQIAVDALIIDVEFACYVFGVFVCDIGHGVFP*
Ga0137384_109280461	3300012357	Vadose Zone Soil	AAQIAVDALIIDVKFARYIFGVFVRGVGHDFFPKIEAER*
Ga0137368_101777231	3300012358	Vadose Zone Soil	ALFFRRLWLFIDVGMAAVVVSLEIGGRGFAAQIAVDALIIDVKLARYVFGVFVRGVGHDLFP*
Ga0137385_114562392	3300012359	Vadose Zone Soil	LEVCGRGFAAQIAVDALIIDVEFARYVLGVFVCGVVHDFFPKIEAER*
Ga0137375_109429453	3300012360	Vadose Zone Soil	IGMAAIVVPFEIGRRSFAAQIAIDALIIDVEFARYVFGVFVCGIGHGFFP*
Ga0137360_107860833	3300012361	Vadose Zone Soil	IDVGMAAVIIALEISGRGFTAQIAVDALIVDVEFSCYVFGVFIRGIGHSFPGKSEGER*
Ga0137360_110131621	3300012361	Vadose Zone Soil	FAAQIAVDALIIDVKFARYVFGVFVCGIGHGLFP*
Ga0137361_100741103	3300012362	Vadose Zone Soil	MAAVIVPFEIRGRGFAAQVTIDTLIIDIEFARYVFGVFVRDIGHGFFRKNAVER*
Ga0137361_101574541	3300012362	Vadose Zone Soil	FTAQIAVDALIIDVKFARYVFGVFVCGIGHGLFP*
Ga0137361_104089544	3300012362	Vadose Zone Soil	AIIVPFEIGRRCFAAQIAIDTLIIDIEFARYVFGVFVRDIGHDFFPKK*
Ga0137361_107928701	3300012362	Vadose Zone Soil	IGRRGFAAQIAVDALIVDVKFSRYVLGVFVRSVGHGFSR*
Ga0137358_105330143	3300012582	Vadose Zone Soil	FIDIGMAAVIVPLKVCGRGFAAQIAVDALIVDVKFARYIFGVFVCDVGHGFSL*
Ga0137358_108329562	3300012582	Vadose Zone Soil	FFWRLRLFVDVGMAAVIVPFEIRGRGFAAQVAIDTLIIDIEFARYVFGVFVRDIGHGFFRKNEVER*
Ga0137397_101013964	3300012685	Vadose Zone Soil	LRLFIDVGMSTVVVPLEIGRRGFAAQIAIDALIIDIEFARYVFGVFVRDIGHGFFPKNEVER*
Ga0137397_110435701	3300012685	Vadose Zone Soil	VWRLRLFIDVGMAAVIVPFKIGRRGFATQIAIDTLIIDIEFARYVFGVFVRDIGHGFFRKNEVEG*
Ga0157292_102952862	3300012900	Soil	LINVRMAAVVVPLEIGRRGFAAQIAVDALIDIEFAWYVFGVFVRGICHGFFSKKEVER*
Ga0137396_113037162	3300012918	Vadose Zone Soil	GFAAQIAIDALIVDVKFSRYVLGVFVRNVSHGFFLESEMER*
Ga0137359_102698773	3300012923	Vadose Zone Soil	FTAQIAVDALIIDVKFARYVFGVFVCGIGHGFPKNEVER*
Ga0137359_108128783	3300012923	Vadose Zone Soil	GMAAVIVALEIGGRGFTAQIAVDALIVDVEFSRYVFGVFIRGISHSFSGKSEGER*
Ga0137359_111410793	3300012923	Vadose Zone Soil	LKVCGRGFAAQIAVDALIVDVKFAWYIFGVFVCDVGHGFSRKSEMER*
Ga0137404_115811822	3300012929	Vadose Zone Soil	FEIGGRGLPAQITVDALIIDVEFTFYVFGVFVCGIGHGFP*
Ga0134077_105869751	3300012972	Grasslands Soil	RGFAAQIAVDALIIDVEFARYVLGVFVCGVGHDFFS*
Ga0134087_100096391	3300012977	Grasslands Soil	AAQVAIDTLIIDIEFARYVFGVFVSDIGHGFFRKNEVER*
Ga0134081_100282014	3300014150	Grasslands Soil	GGRGFTAQIAVDALIIDVKFARYVFGVFVCGIGHGFPVK*
Ga0134078_103222842	3300014157	Grasslands Soil	WLFIDVGMAAVVVSLEIGGRGFAAQIAVDALIIDVKLARYVFGVFVRGVGHDFPVKSEAER*
Ga0134079_100767443	3300014166	Grasslands Soil	EIGGRGFAAQIAVDALIIDVKLARYVFGVFVRGVGHDFPVKSETER*
Ga0163163_125994211	3300014325	Switchgrass Rhizosphere	FAAQIAINALIIDVELARYVFGVFVRGIGHGFFS*
Ga0137420_10896933	3300015054	Vadose Zone Soil	QIAIDTLIIDIEFARYVFGVFVRDIGHGFFRKNEVEG*
Ga0173483_105075002	3300015077	Soil	MAAVVVPLEIGRRGFAAQIAVDALIIDIEFAWYVFGVFVRGICHGFFSKKEVER*
Ga0132255_1063690951	3300015374	Arabidopsis Rhizosphere	VRMAAVVVPLEIGRRGFAAQIAVDALIIDIEFAWYVFGVFVRGICHGFFSKKEVER*
Ga0182035_120373531	3300016341	Soil	RLWLFIDVGMAAVIVSFEVGRRRFAAQIAVDALIIYVKLTGDVLGVFVCGIGHGFRKK
Ga0182038_101915543	3300016445	Soil	AESFFVRRLWLFIDVGMAAVIIPLEIGRRRFATQIAIDALIIYVKLAGYVLGVFVCGISHGFSVKNKGER
Ga0066655_100451061	3300018431	Grasslands Soil	IVPFEIRGRGFAAQVAIDTLIIDIEFARYVFGVFVRDIGHGFFRKNEVER
Ga0066667_100672981	3300018433	Grasslands Soil	MAAVVVPLEVRRRCFAAQIAVDALVIDVEFTGYVFGVFV
Ga0066667_106496713	3300018433	Grasslands Soil	MAAIIVPLEVGGRGLAAQIAVDALVIDIEFAGYVFGVFVCDIGHSLSRKNKVER
Ga0066662_107777392	3300018468	Grasslands Soil	MAAVIVPFEIRGRGFAAQVAIDTLIIDIEFARYVFGVFVRDIGHGFFRKNEVER
Ga0066662_117343032	3300018468	Grasslands Soil	MAAIVIALEIGRRSFAAQIAIDALIIDIEFARYIFWIYVISISLSFYVKGS
Ga0193701_10188303	3300019875	Soil	IVTLEIGGRGFAAQIAVDALIIDVKFTRYVFGVFVRGVSHDFSRKSEAER
Ga0193728_11658711	3300019890	Soil	LLIDVGMAAVIVPLEVGGRCFAAQITVDALVIDVKFTGYVFGVFVRGVGHGFSRKNEAER
Ga0193734_10072751	3300020015	Soil	IVRRGFAAQIAVDALIIDVEFARYVFGVFVRGIGHGIFP
Ga0193733_10356743	3300020022	Soil	FAAQITVDALVIDVKFTGYVFGVFVRGVGHGFSRKNEAER
Ga0193752_11690122	3300020027	Soil	PLEIGRRGFAAQIAVDALIIDIEFARYVFGVFVRGIGHGFFPKNEVER
Ga0193699_101713582	3300021363	Soil	IDVRMAAVVVPLEIGRRGFAAQIAVDALIIDIEFARYVFGVFVCGIGHGFFPKNEVER
Ga0224452_11900791	3300022534	Groundwater Sediment	LRLFIHIGMAAVVVAFEIGRRGLPAQIAVDTLIIDVEFARYVFGVLVRCISHGFPGKSEVEG
Ga0209468_10054227	3300026306	Soil	RFFAEALFLRRLWLFIDVGMAAVVVSLEIGGRGFAAQIAVDALIIDVKLARYVFGVFVRGVGHDFPVKSEAER
Ga0209239_11311533	3300026310	Grasslands Soil	IVPFEIGRRGFPAQIAIDALIINVEFARYVFGVFVRSVGHRLFA
Ga0209266_10377841	3300026327	Soil	GFAAQVAIDTLIIDIEFARYVFGVFVRDIGHGFFRKNEVER
Ga0209057_10247565	3300026342	Soil	RGFAAQVAIDTLIIDIEFARYVFGVFVRDIGHGFFRKNEVER
Ga0209161_100369745	3300026548	Soil	ESFFVRRLWLFIDVGMAAVIVSLEIAGCRFATQIAVDALIIYVKLAGYVLGVFVCGIGHDLFP
Ga0209474_104229251	3300026550	Soil	MTAIVVTLEIGRRGLPAQIAVDTLIIDVEFARYVFGVFVRDIGHGLPGKSEVER
Ga0209526_102610313	3300028047	Forest Soil	AVDALIIDVEFARYVFGVFVCDVGHGFSRKSEVER
Ga0307320_101885061	3300028771	Soil	IGMAAVVVALEIGRRSLTAQIAVDALIVDVEFARYVFGVFVRYISHGFPGKSEVER
Ga0075402_120057051	3300030777	Soil	RLWLLIDIGMATVIIPLEIGRRGFAAQIAIDALIIDVEFARYVFGVFVREIGHGFFPKNEVER
Ga0075405_119953663	3300030847	Soil	GCRFAAQIAVDALIVDVEFSCYVFGVFVRGISHSFSGKSEFEG
Ga0075374_111067631	3300030855	Soil	AQIAVDALIVDVEFSCYVFGVFVRSISHSFSGKSEFEG
Ga0307471_1029579672	3300032180	Hardwood Forest Soil	FIDVRMAAVIVPLEIGGRCFTAQIAVDALVIYIEFARYVLGVFVRGVGHGFSVKNEGER

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F042495

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences