Metagenome Family F042482

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F042482
Family Type	Metagenome
Number of Sequences	158
Average Sequence Length	44 residues
Representative Sequence	MIVKAEGPSGRAKIHSDDPKHALGLAQYLRTIGYNAWIEDTNGN
Number of Associated Samples	110
Number of Associated Scaffolds	158

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	78.06 %
% of genes near scaffold ends (potentially truncated)	89.87 %
% of genes from short scaffolds (< 2000 bps)	92.41 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.66

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (57.595 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (38.608 % of family members)
Environment Ontology (ENVO)	Unclassified (49.367 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.734 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 18.06% β-sheet: 23.61% Coil/Unstructured: 58.33%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.66
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.66
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 158 Family Scaffolds
PF01161	PBP	17.72
PF02074	Peptidase_M32	4.43
PF12802	MarR_2	3.80
PF00578	AhpC-TSA	3.16
PF03401	TctC	1.90
PF13508	Acetyltransf_7	1.90
PF07883	Cupin_2	1.90
PF03733	YccF	1.90
PF05036	SPOR	1.27
PF01650	Peptidase_C13	1.27
PF07758	DUF1614	1.27
PF02586	SRAP	1.27
PF12399	BCA_ABC_TP_C	1.27
PF00583	Acetyltransf_1	1.27
PF01844	HNH	0.63
PF00216	Bac_DNA_binding	0.63
PF13442	Cytochrome_CBB3	0.63
PF01391	Collagen	0.63
PF10431	ClpB_D2-small	0.63
PF07690	MFS_1	0.63
PF00239	Resolvase	0.63
PF06568	DUF1127	0.63
PF00355	Rieske	0.63
PF00005	ABC_tran	0.63
PF04347	FliO	0.63
PF07045	DUF1330	0.63
PF13565	HTH_32	0.63
PF03729	DUF308	0.63
PF01042	Ribonuc_L-PSP	0.63
PF13439	Glyco_transf_4	0.63
PF00850	Hist_deacetyl	0.63
PF10003	DUF2244	0.63
PF01979	Amidohydro_1	0.63
PF06904	Extensin-like_C	0.63
PF13432	TPR_16	0.63
PF04392	ABC_sub_bind	0.63
PF01124	MAPEG	0.63

COG ID	Name	Functional Category	% Frequency in 158 Family Scaffolds
COG1881	Uncharacterized conserved protein, phosphatidylethanolamine-binding protein (PEBP) family	General function prediction only [R]	17.72
COG2317	Zn-dependent carboxypeptidase, M32 family	Posttranslational modification, protein turnover, chaperones [O]	4.43
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	1.90
COG3304	Uncharacterized membrane protein YccF, DUF307 family	Function unknown [S]	1.90
COG0123	Acetoin utilization deacetylase AcuC or a related deacetylase	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.27
COG5206	Glycosylphosphatidylinositol transamidase (GPIT), subunit GPI8	Posttranslational modification, protein turnover, chaperones [O]	1.27
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	1.27
COG4089	Uncharacterized membrane protein	Function unknown [S]	1.27
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.63
COG5457	Uncharacterized conserved protein YjiS, DUF1127 family	Function unknown [S]	0.63
COG3921	Uncharacterized conserved protein, contains Extensin-like_C domain	Function unknown [S]	0.63
COG3247	Acid resistance membrane protein HdeD, DUF308 family	General function prediction only [R]	0.63
COG3190	Flagellar biogenesis protein FliO	Cell motility [N]	0.63
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.63
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.63
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.63
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	0.63
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.63

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.59 %
Unclassified	root	N/A	42.41 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	57.59 %
Unclassified	root	N/A	42.41 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	57.59 %
Unclassified	root	N/A	42.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.41 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	41.14 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.90 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.41 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	38.61 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.63 %
Deinococcus-Thermus	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus	0.63 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.63 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.41 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	24.68 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	5.70 %
Parvularculales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Parvularculales	0.63 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.63 %
Deinococci	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci	0.63 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	0.63 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.63 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.41 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	19.62 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.70 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.63 %
Yersiniaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Yersiniaceae	0.63 %
Parvularculaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Parvularculales → Parvularculaceae	0.63 %
Deinococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales	0.63 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.63 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.63 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.41 %
Nitrobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter	11.39 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.70 %
unclassified Parvularculaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Parvularculales → Parvularculaceae → unclassified Parvularculaceae	0.63 %
Deinococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae	0.63 %
Serratia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Yersiniaceae → Serratia	0.63 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.63 %
Azospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum	0.63 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.63 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.63 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.41 %
Nitrobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter	11.39 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.70 %
Parvularculaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Parvularculales → Parvularculaceae → unclassified Parvularculaceae → Parvularculaceae bacterium	0.63 %
Serratia ureilytica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Yersiniaceae → Serratia → Serratia ureilytica	0.63 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.63 %
Azospirillum halopraeferens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum halopraeferens	0.63 %
Deinococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus	0.63 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.63 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.63 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.41 %
Nitrobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter	11.39 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.70 %
Bradyrhizobium sp. WSM3983	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WSM3983	0.63 %
Parvularculaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Parvularculales → Parvularculaceae → unclassified Parvularculaceae → Parvularculaceae bacterium	0.63 %
Serratia ureilytica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Yersiniaceae → Serratia → Serratia ureilytica	0.63 %
Azospirillum halopraeferens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum halopraeferens	0.63 %
Deinococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus	0.63 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.63 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.63 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.63 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000816\|AF_2010_repII_A10DRAFT_1021719	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300005332\|Ga0066388_103169065	All Organisms → cellular organisms → Bacteria → Acidobacteria	840	Open in IMG/M
3300005332\|Ga0066388_105137619	Not Available	664	Open in IMG/M
3300005549\|Ga0070704_102264762	Not Available	505	Open in IMG/M
3300005556\|Ga0066707_10030685	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2971	Open in IMG/M
3300005560\|Ga0066670_10053633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2101	Open in IMG/M
3300005764\|Ga0066903_104934227	Not Available	708	Open in IMG/M
3300005764\|Ga0066903_105477268	Not Available	669	Open in IMG/M
3300005764\|Ga0066903_107435662	Not Available	566	Open in IMG/M
3300005764\|Ga0066903_108100586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	538	Open in IMG/M
3300006028\|Ga0070717_11011576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter	757	Open in IMG/M
3300006046\|Ga0066652_102091097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter	502	Open in IMG/M
3300006059\|Ga0075017_100393831	Not Available	1038	Open in IMG/M
3300006174\|Ga0075014_100696154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter	590	Open in IMG/M
3300006174\|Ga0075014_100717749	Not Available	583	Open in IMG/M
3300006175\|Ga0070712_100232201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1465	Open in IMG/M
3300010043\|Ga0126380_11290184	Not Available	635	Open in IMG/M
3300010047\|Ga0126382_11726249	Not Available	586	Open in IMG/M
3300010048\|Ga0126373_11446677	All Organisms → cellular organisms → Bacteria → Proteobacteria	753	Open in IMG/M
3300010303\|Ga0134082_10102245	All Organisms → cellular organisms → Bacteria	1135	Open in IMG/M
3300010358\|Ga0126370_10498276	Not Available	1028	Open in IMG/M
3300010358\|Ga0126370_12482147	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	516	Open in IMG/M
3300010360\|Ga0126372_10233142	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1564	Open in IMG/M
3300010360\|Ga0126372_12398178	Not Available	578	Open in IMG/M
3300010360\|Ga0126372_12940060	Not Available	528	Open in IMG/M
3300010361\|Ga0126378_10830986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter	1032	Open in IMG/M
3300010366\|Ga0126379_13021170	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300010376\|Ga0126381_101606251	Not Available	939	Open in IMG/M
3300010376\|Ga0126381_104887229	Not Available	515	Open in IMG/M
3300010399\|Ga0134127_12501226	Not Available	596	Open in IMG/M
3300010868\|Ga0124844_1062485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1348	Open in IMG/M
3300012200\|Ga0137382_11181872	Not Available	544	Open in IMG/M
3300012201\|Ga0137365_11266087	Not Available	525	Open in IMG/M
3300012206\|Ga0137380_10305656	Not Available	1424	Open in IMG/M
3300013105\|Ga0157369_11902651	Not Available	604	Open in IMG/M
3300015374\|Ga0132255_105827884	Not Available	521	Open in IMG/M
3300016270\|Ga0182036_11408199	Not Available	584	Open in IMG/M
3300016294\|Ga0182041_10332589	Not Available	1271	Open in IMG/M
3300016294\|Ga0182041_12099930	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	527	Open in IMG/M
3300016319\|Ga0182033_10339616	Not Available	1252	Open in IMG/M
3300016319\|Ga0182033_10719374	Not Available	875	Open in IMG/M
3300016341\|Ga0182035_10937117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	765	Open in IMG/M
3300016341\|Ga0182035_11585354	Not Available	590	Open in IMG/M
3300016341\|Ga0182035_12019729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	524	Open in IMG/M
3300016341\|Ga0182035_12183935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	502	Open in IMG/M
3300016357\|Ga0182032_10551976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	953	Open in IMG/M
3300016371\|Ga0182034_11208772	All Organisms → cellular organisms → Bacteria → Terrabacteria group	658	Open in IMG/M
3300016387\|Ga0182040_11783513	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300016387\|Ga0182040_11868276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Parvularculales → Parvularculaceae → unclassified Parvularculaceae → Parvularculaceae bacterium	515	Open in IMG/M
3300016404\|Ga0182037_10433006	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1090	Open in IMG/M
3300016404\|Ga0182037_10498561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1020	Open in IMG/M
3300016404\|Ga0182037_10924210	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300016404\|Ga0182037_11167718	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	675	Open in IMG/M
3300016445\|Ga0182038_10774231	Not Available	840	Open in IMG/M
3300017924\|Ga0187820_1015098	All Organisms → cellular organisms → Bacteria → Proteobacteria	1894	Open in IMG/M
3300017924\|Ga0187820_1058102	All Organisms → cellular organisms → Bacteria	1056	Open in IMG/M
3300017936\|Ga0187821_10172047	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300017936\|Ga0187821_10411059	Not Available	555	Open in IMG/M
3300017955\|Ga0187817_10243058	Not Available	1147	Open in IMG/M
3300017959\|Ga0187779_10954027	Not Available	593	Open in IMG/M
3300017959\|Ga0187779_10960944	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter	591	Open in IMG/M
3300017973\|Ga0187780_11257163	Not Available	543	Open in IMG/M
3300017974\|Ga0187777_10272380	All Organisms → cellular organisms → Bacteria	1153	Open in IMG/M
3300018001\|Ga0187815_10344461	Not Available	633	Open in IMG/M
3300018006\|Ga0187804_10574964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter	511	Open in IMG/M
3300020150\|Ga0187768_1093461	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300020150\|Ga0187768_1145463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter	546	Open in IMG/M
3300020579\|Ga0210407_10566372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	886	Open in IMG/M
3300020581\|Ga0210399_10658028	Not Available	863	Open in IMG/M
3300020581\|Ga0210399_10979527	Not Available	682	Open in IMG/M
3300020582\|Ga0210395_10598373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	828	Open in IMG/M
3300020582\|Ga0210395_10620796	Not Available	811	Open in IMG/M
3300021168\|Ga0210406_10582020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	876	Open in IMG/M
3300021178\|Ga0210408_10395279	All Organisms → cellular organisms → Bacteria	1101	Open in IMG/M
3300021402\|Ga0210385_11545106	Not Available	507	Open in IMG/M
3300021405\|Ga0210387_11472817	Not Available	583	Open in IMG/M
3300021406\|Ga0210386_10322695	Not Available	1326	Open in IMG/M
3300021407\|Ga0210383_10176551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1822	Open in IMG/M
3300021478\|Ga0210402_11953555	Not Available	512	Open in IMG/M
3300021560\|Ga0126371_12217497	Not Available	663	Open in IMG/M
3300025915\|Ga0207693_10336411	All Organisms → cellular organisms → Bacteria	1181	Open in IMG/M
3300025939\|Ga0207665_11166272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Yersiniaceae → Serratia → Serratia ureilytica	614	Open in IMG/M
3300026865\|Ga0207746_1013785	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	692	Open in IMG/M
3300031057\|Ga0170834_101012568	Not Available	599	Open in IMG/M
3300031057\|Ga0170834_110361775	All Organisms → cellular organisms → Bacteria → Proteobacteria	519	Open in IMG/M
3300031231\|Ga0170824_110210622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	970	Open in IMG/M
3300031231\|Ga0170824_123091971	Not Available	599	Open in IMG/M
3300031446\|Ga0170820_10925819	Not Available	556	Open in IMG/M
3300031543\|Ga0318516_10157159	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1307	Open in IMG/M
3300031543\|Ga0318516_10436414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum halopraeferens	753	Open in IMG/M
3300031544\|Ga0318534_10770693	Not Available	541	Open in IMG/M
3300031545\|Ga0318541_10015349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3554	Open in IMG/M
3300031564\|Ga0318573_10039988	All Organisms → cellular organisms → Bacteria	2242	Open in IMG/M
3300031572\|Ga0318515_10552021	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300031679\|Ga0318561_10447236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter	711	Open in IMG/M
3300031682\|Ga0318560_10562671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	618	Open in IMG/M
3300031682\|Ga0318560_10761933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter	523	Open in IMG/M
3300031708\|Ga0310686_109756962	Not Available	792	Open in IMG/M
3300031708\|Ga0310686_111167508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2239	Open in IMG/M
3300031719\|Ga0306917_11496981	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter	519	Open in IMG/M
3300031747\|Ga0318502_10029278	All Organisms → cellular organisms → Bacteria	2764	Open in IMG/M
3300031747\|Ga0318502_10468955	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300031753\|Ga0307477_10191316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1424	Open in IMG/M
3300031753\|Ga0307477_10532415	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300031765\|Ga0318554_10711784	Not Available	563	Open in IMG/M
3300031769\|Ga0318526_10357932	Not Available	597	Open in IMG/M
3300031771\|Ga0318546_10214960	Not Available	1316	Open in IMG/M
3300031781\|Ga0318547_10166305	All Organisms → cellular organisms → Bacteria	1304	Open in IMG/M
3300031781\|Ga0318547_10332951	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	925	Open in IMG/M
3300031782\|Ga0318552_10232389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	935	Open in IMG/M
3300031792\|Ga0318529_10056081	All Organisms → cellular organisms → Bacteria	1709	Open in IMG/M
3300031792\|Ga0318529_10197183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter	933	Open in IMG/M
3300031797\|Ga0318550_10160320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1083	Open in IMG/M
3300031797\|Ga0318550_10468915	Not Available	608	Open in IMG/M
3300031797\|Ga0318550_10560409	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300031798\|Ga0318523_10632512	Not Available	526	Open in IMG/M
3300031821\|Ga0318567_10451673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	729	Open in IMG/M
3300031833\|Ga0310917_10244252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WSM3983	1207	Open in IMG/M
3300031833\|Ga0310917_11107164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	528	Open in IMG/M
3300031845\|Ga0318511_10420282	Not Available	614	Open in IMG/M
3300031879\|Ga0306919_10233170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1380	Open in IMG/M
3300031879\|Ga0306919_10324892	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1171	Open in IMG/M
3300031880\|Ga0318544_10207723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	756	Open in IMG/M
3300031890\|Ga0306925_10383270	Not Available	1508	Open in IMG/M
3300031890\|Ga0306925_10662925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter	1095	Open in IMG/M
3300031897\|Ga0318520_10145094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus	1372	Open in IMG/M
3300031941\|Ga0310912_10873840	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300031945\|Ga0310913_10066653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2378	Open in IMG/M
3300031945\|Ga0310913_10630647	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300031946\|Ga0310910_10409688	Not Available	1074	Open in IMG/M
3300031947\|Ga0310909_10120176	Not Available	2133	Open in IMG/M
3300031954\|Ga0306926_11252726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter	868	Open in IMG/M
3300031959\|Ga0318530_10342634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter	619	Open in IMG/M
3300031962\|Ga0307479_10762558	All Organisms → cellular organisms → Bacteria	944	Open in IMG/M
3300032001\|Ga0306922_10908588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	914	Open in IMG/M
3300032001\|Ga0306922_12043894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	557	Open in IMG/M
3300032025\|Ga0318507_10211036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter	839	Open in IMG/M
3300032035\|Ga0310911_10236064	Not Available	1045	Open in IMG/M
3300032035\|Ga0310911_10238560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1039	Open in IMG/M
3300032035\|Ga0310911_10930191	Not Available	501	Open in IMG/M
3300032044\|Ga0318558_10623475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter	539	Open in IMG/M
3300032059\|Ga0318533_10243970	Not Available	1295	Open in IMG/M
3300032059\|Ga0318533_10308429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1149	Open in IMG/M
3300032063\|Ga0318504_10387178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter	666	Open in IMG/M
3300032063\|Ga0318504_10491562	Not Available	588	Open in IMG/M
3300032065\|Ga0318513_10485232	Not Available	604	Open in IMG/M
3300032076\|Ga0306924_10200929	Not Available	2288	Open in IMG/M
3300032076\|Ga0306924_10500469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1384	Open in IMG/M
3300032174\|Ga0307470_10604292	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter	821	Open in IMG/M
3300032174\|Ga0307470_10852729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	711	Open in IMG/M
3300032180\|Ga0307471_103876178	Not Available	529	Open in IMG/M
3300032261\|Ga0306920_103647742	Not Available	566	Open in IMG/M
3300033289\|Ga0310914_10658935	Not Available	941	Open in IMG/M
3300033289\|Ga0310914_11313269	Not Available	626	Open in IMG/M
3300033290\|Ga0318519_10309066	Not Available	927	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.73%
Host-Associated	Host-Associated	1.27%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.77%
Aquatic	Environmental → Aquatic	6.96%
Plants	Host-Associated → Plants	1.27%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.77%
Freshwater	Environmental → Aquatic → Freshwater	5.06%
Sediment	Environmental → Aquatic → Sediment	1.90%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.63%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	79.11%
Loam	Environmental → Terrestrial → Soil → Loam	8.23%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.06%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.43%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	64.56%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.66%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.06%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.06%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.43%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.16%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.90%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	38.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.35%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.23%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	5.06%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.06%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.43%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.80%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.16%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.90%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.27%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.63%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.63%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.63%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000816	Forest soil microbial communities from Amazon forest - 2010 replicate II A10	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300020150	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026865	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 75 (SPAdes)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A10DRAFT_10217191	3300000816	Forest Soil	MIVKAEGPSGRAKIKSEQPKHALGLVNYLRAIGYKAWI
Ga0066388_1031690651	3300005332	Tropical Forest Soil	MLVKAEGPTGRAKIHSDNPKHALGLAQYLRTIGYNAWIEDSNG
Ga0066388_1051376192	3300005332	Tropical Forest Soil	VSIIVKAEGPSGRAKINSDGSKHALRLVQYLRSIGYEAWIEDADGNEI
Ga0070704_1022647621	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MIVRAIGPSGPAKIHSDDSKHALGLVQYLRTIGYNAWIEDTNGNQIEET
Ga0066707_100306851	3300005556	Soil	MIVKAEGPSGRAKIHSDESKHALGLVQYLRTIGYKAWIEDTNGNEIDE
Ga0066670_100536333	3300005560	Soil	VSIFAKAEGPSGRAKMRSDDPEHALGLIQYLGTIGYNAWIEVFSR*
Ga0066903_1049342271	3300005764	Tropical Forest Soil	KWVARTVSMIVKAEGPSGRAKIHSDDPKHALGLAQYLRTIGYNAWIEDTN*
Ga0066903_1054772681	3300005764	Tropical Forest Soil	MIVKAEGPTGRAKIHSDNPKHALGLAQYLRTIGYDAWI
Ga0066903_1074356621	3300005764	Tropical Forest Soil	VSMIVKAEGPSGRAKIHSYDPKHALGLAHYLRAIGYKAWIEDTNG
Ga0066903_1081005861	3300005764	Tropical Forest Soil	MIVKAKGPSGRAKIDSDDPKHALDLIQYLRTMGYNA*
Ga0070717_110115762	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MSIIVKAEGPSGPAKIRSDDPKHALGLAQYLRTIG
Ga0066652_1020910971	3300006046	Soil	MIVKADGPSGRAKIRSDDPKHALGLAQYLRTIGYN
Ga0075017_1003938311	3300006059	Watersheds	MIVKAKGPSGPAKIHSDDPMHALGLVQYLRTIGYKAWIE
Ga0075014_1006961541	3300006174	Watersheds	MFVKAEGPSGRAKIHSDDPKHALGLAQYLRTIGYNAWIEDTNGNEID
Ga0075014_1007177491	3300006174	Watersheds	VSIIVKAEGPSGPAKIHSNDPKHALGLVQYLRTIGYNAWIEDT
Ga0070712_1002322013	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VSIIVKAEGPSGPAKIRSDDPKHALGLVQYLRTIGYSAWVPRKGPKDGD*
Ga0126380_112901842	3300010043	Tropical Forest Soil	VIVKAEGPSGRTKIHSDDPRHASGPAQYLRTIGYNAWIEDTTAM
Ga0126382_117262492	3300010047	Tropical Forest Soil	MIVKAEGPSGRAKIHSDDPKHALGLAQYLRTLGYTAWIEDTNGNEIDEKSLR*
Ga0126373_114466771	3300010048	Tropical Forest Soil	MRPVSIIVKAEGPSGPAKIDSDDPKHALGLVQYL*
Ga0134082_101022451	3300010303	Grasslands Soil	VIVKAEGPSGRAKIHSDDPKHALGLAQYLRTIGYNAWIEDTNGNEID
Ga0126370_104982761	3300010358	Tropical Forest Soil	VIVKAEGPSGRAKIHSDDPKHALGLVQYLRTIGYNAWIEDTNGNEIDEK
Ga0126370_124821472	3300010358	Tropical Forest Soil	MIVKAEGPCGHAKIHSDNPKHALSLIQCLRTIGYSASIEDTNGNEVDE
Ga0126372_102331421	3300010360	Tropical Forest Soil	MIVKAEGPSGPAKIRSDDPKHALGLAQYLRTIGYNAWLEDTN
Ga0126372_123981781	3300010360	Tropical Forest Soil	MIVKAEGPSGRAKIHSDNSKHALGLAQYLRTIGYNAWTEDSNGNEIEGR*
Ga0126372_129400601	3300010360	Tropical Forest Soil	MFVKAEGPSGRAKIHSDDPKHALGLAQYLRTIGYDAWIEDTKGNAI
Ga0126378_108309863	3300010361	Tropical Forest Soil	MIVKAEGPGGHAKIHSDDAKHALGLAQYLRTIGYSAWIE
Ga0126379_130211701	3300010366	Tropical Forest Soil	MIVKAEGPSGRAKINSDGPKHALGLVQCLRSIGYDAPLEDAFIARGQHLKA
Ga0126381_1016062511	3300010376	Tropical Forest Soil	MIVKAEGPGGRAKIRSDNPKHALGLAQYLRTIGYNAWIE
Ga0126381_1048872292	3300010376	Tropical Forest Soil	MFVKAEGPSGRAKIRSDDPKYALGLVQYLRSIDYNAWIEDTNGNAIDEK
Ga0134127_125012261	3300010399	Terrestrial Soil	MRGAVCTIVKAKGPRGPAKIRPDDPKHALGLVHYLRTIGYEAW
Ga0124844_10624853	3300010868	Tropical Forest Soil	MFVKAEGPSGRAKIHSDDPKHALGLAQYLRTIGYSAWI
Ga0137382_111818721	3300012200	Vadose Zone Soil	MIVKAEGPSGRVKIHSDDPKHALGLVQYLRTIGYNA
Ga0137365_112660871	3300012201	Vadose Zone Soil	MIVKAEGPSGRAKIRSDDPKHALGLVHYLRTIGYNAWIEDTNG
Ga0137380_103056563	3300012206	Vadose Zone Soil	MMIVKAEGPSGRAKIHSDDPKHALGLVQYLRTIGY
Ga0157369_119026511	3300013105	Corn Rhizosphere	MSMIVKAKGPSGPAKIRPDDPKHALGLVHYLRTIGYEAWIEDVNGNEIEEA
Ga0132255_1058278842	3300015374	Arabidopsis Rhizosphere	MIVKAKDPSGPAKIRSDDPRHALGLVHYLRTIGYEAWIEDMNGNEIEE
Ga0182036_114081993	3300016270	Soil	MIVKAEGPSGTAKINSDGPKHALGLVQYLRSIGYEAWIE
Ga0182041_103325891	3300016294	Soil	PAKIHSDDPKHALGLVQYLRAIGYNVWIEDANGNEIAKRH
Ga0182041_120999302	3300016294	Soil	MSIIVKAEGPSGRAKIHSDDPKHALGLAQYLRTIGYNAWIEDTNGNEIDEKAL
Ga0182033_103396164	3300016319	Soil	VKAEGPSGPAKIHSDDPKHALGLVQYLRAIGYNVWIEDANGNEIAKRH
Ga0182033_107193741	3300016319	Soil	MIVKAEGPSGPAKIHSDDPKHALGLAQYLRTIGYSAWIEDRNGN
Ga0182035_109371172	3300016341	Soil	VRPVGMIVKAEGPSGRAKIHSDDPKHALGLAQYLRTIGYNAWIE
Ga0182035_115853542	3300016341	Soil	MFVKAEGPSGRAKIRSDDPKHALGLAQYLRTIGYNAWIEDTNGNSHHE
Ga0182035_120197292	3300016341	Soil	LIVKAKGSSGSAKIHSDDPKHALGLVQYLRTIDYE
Ga0182035_121839352	3300016341	Soil	MSIIVKAEGPSGRAKIHSDDPKHALGLAQYLRTIGYNAWIEDTNGNEID
Ga0182032_105519762	3300016357	Soil	MIVKAEGPSGLAKIHSDDPKYALGLAQYLRTIGYNAWIEDANGNE
Ga0182034_112087722	3300016371	Soil	MIVKAEGPSGRAKINSDGPKHALGLVQYLRSIGYEAWIEDA
Ga0182040_117835131	3300016387	Soil	MIVKAEGRNGRAKINSDGPKHALGLVQYLRSIGYEA
Ga0182040_118682762	3300016387	Soil	VSIVVKAEGPSGPAKIRSDDPKHALGLAQYLRTIGYT
Ga0182037_104330061	3300016404	Soil	MSIIVKAEGPSGRAKIHSDDPKHALGLAQYLRTIGYNAWIEDTNGN
Ga0182037_104985613	3300016404	Soil	MIVKAEGPSGRAKIHSDDPKHALGLAQYLRTIGYN
Ga0182037_109242102	3300016404	Soil	MIVKAEGPNGRAKINSDGPKHALGLVQYLRSIGYEAWIEDADGNEIE
Ga0182037_111677182	3300016404	Soil	VSIIVKAEGPSGRAKIRSDDPKHALGLAQYLRTIGYEAWIEDTN
Ga0182038_107742312	3300016445	Soil	MIVKANGPSGRAKIRSDDPKHALSLVQYLRTIGYNAWI
Ga0187820_10150983	3300017924	Freshwater Sediment	VSIIVKAEGPSGRAKIHSDGPERALGLVQYLRTIGYNAWIEDTNGNE
Ga0187820_10581021	3300017924	Freshwater Sediment	GATVSIIVKAEGPSGRAKIRSDDPKHALGLAQYLRTIGYNAWIEDTNGNAIDERP
Ga0187821_101720473	3300017936	Freshwater Sediment	VSIIVKAEGPSGRAKIHSDDPKHAWGLAQYLRTIDYNAWIEDTNGNEIDEKALK
Ga0187821_104110591	3300017936	Freshwater Sediment	VIMIVKAEGPSGPAKIHSDGPKRALGLVQYLRTIGYNSWI
Ga0187817_102430582	3300017955	Freshwater Sediment	MIVKAKGPSGPAKIYSDDPKQALSLVQYLGTIGYQAWIEDTNGNEI
Ga0187779_109540271	3300017959	Tropical Peatland	VSIFVKAEGPSGRAKIHSDDPKHALGLVQYLRTIGYNARIEDTNG
Ga0187779_109609442	3300017959	Tropical Peatland	MIVKAEGPSGRAKIHSDNPKHALGLAQYLRTIGYNAWIEDTNG
Ga0187783_114162631	3300017970	Tropical Peatland	MSNTQHKVRAVSIIVKAEGPSGPAKIHSDDPKHALGLAQYLRTIGYNAWIEDTN
Ga0187780_112571632	3300017973	Tropical Peatland	MIVKAEGPSGRAKIHSDEPKHALGLVQYLRTIGYEAWIEDANGN
Ga0187777_102723802	3300017974	Tropical Peatland	VSFIVKAEGPSGRAKIRSVDPKHALGLAQYLRTIGYKAWIEDTN
Ga0187822_103095531	3300017994	Freshwater Sediment	VSIIVKAEGPSGRAKIRSDDTKHALGLAQYLRTIGYNAWIEDSNGNAIRRKGPKDGD
Ga0187815_103444611	3300018001	Freshwater Sediment	MIVKAEGPSGPAKIHSDEPKHALGLVQYLRTIGYTAWI
Ga0187804_105749642	3300018006	Freshwater Sediment	MIVKAEGPSGPAKIRSGDPKQALGLAQYLRTIGYN
Ga0187768_10934612	3300020150	Tropical Peatland	MIVKAEGPSGRAKIHSDEPKHALGLVQYLRTIGYEAWIEDANGNEIEEEA
Ga0187768_11454631	3300020150	Tropical Peatland	VSIIVKAEGPSGRAKILADDPKHALGLVRYLRTIGYKAWIENANCNEI
Ga0210407_105663721	3300020579	Soil	MIVKAKGPSGPAKIHSDDPKHALGLVQYLRTIGYK
Ga0210399_106580281	3300020581	Soil	MIVKAKGPSGPAKIHSDDPKHALGLVQYLRTIGYKAWIEDT
Ga0210399_109795271	3300020581	Soil	MIVKAKAPSGPGKIHSDDPKHALGLVQYLRTIGYKAWIED
Ga0210395_105983731	3300020582	Soil	MIVKAKGPSGPAKIHSDDPKHALGLVQYLRTIGYKAWIEDA
Ga0210395_106207961	3300020582	Soil	MAGKDEKWVMIVKAKGPSGPAKIHSDDPKHALGLVQYLRAIGYTAWIEDTDGN
Ga0210406_105820202	3300021168	Soil	MIVKAEGPSGPAKIYSDNPKHALGLAQYLRTIGYNAWIEDTNGNEIDEKKDGDCR
Ga0210408_103952792	3300021178	Soil	MIVKAKGQGGSAKIHSDDPKHALGLVQYLRTIGYEAWVEDT
Ga0210385_115451061	3300021402	Soil	VSTIVKAKGPSGPAKIHSDDPKHALGLLQYLRTIGYKAWIEDAN
Ga0210387_114728172	3300021405	Soil	MIVKAKGPSGPAKIHSDDPKHALALVQYLRTIGYKAWIEDTNGN
Ga0210386_103226954	3300021406	Soil	VSMIVKAKGPSGPAKIHSDDPKHALGLVQYLRTIG
Ga0210383_101765514	3300021407	Soil	VSIIVKAEGPSGPAKIRSDDPKHALGLVQYLRTIGYSAWVEDTNGTEIPE
Ga0210402_119535551	3300021478	Soil	VSMIVKAKGPSGPAKIHSHDPKHALGLVQYLRTIGYKAWIEDANGNM
Ga0126371_122174971	3300021560	Tropical Forest Soil	VSIIVKAEGPSGRAKIHSDDPKHALGLAQYLRTIGYSAW
Ga0207693_103364111	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MIVRANGPSGPAKIHSDDSKHALGLVQYLRTIGYNAWIEDTNGNQIEE
Ga0207665_111662721	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MIVRANGPSGPAKIHSDDSKHALGLVQYLRTIGYNAWIEDTNGNQI
Ga0207746_10137851	3300026865	Tropical Forest Soil	MVVKAEGPSGPAKIHSDDPKHALGLAQYLRTIGYNVWIEDTNGNVIDEKV
Ga0170834_1010125681	3300031057	Forest Soil	MIVKAEGPSCRAKIHADDPKHALGLAQYLRTIGYNALIEDTNGNEIDEKA
Ga0170834_1103617751	3300031057	Forest Soil	MFVKAEGPSGRAKIRSDDPKHALGLAQYLRTIGYNAWIEDTNGNEID
Ga0170824_1102106223	3300031231	Forest Soil	MIVKAKGPSGPAKIHSDDPKHALGLVQYLRTIGYKAWIEDANGN
Ga0170824_1230919712	3300031231	Forest Soil	MVVKAEGPSGRAKIHSDDPKHALGLVQYLRTIGYKAWIEDTNGNEIEE
Ga0170820_109258191	3300031446	Forest Soil	MVVKAEGPSGRAKIHSDDPKHALGLVQYLRTIGYK
Ga0318516_101571591	3300031543	Soil	MIVKAEGPRGRAKIHPDDPRHALGLVHYLRTIGYTAWIEDTYG
Ga0318516_104364143	3300031543	Soil	MIVKAEGPSGRAKTHSDDPKHALGLAHYLRTIGYNAWIEDTNG
Ga0318534_107706933	3300031544	Soil	MIVKAEGPSGPAKIRSDDPKHALGLVQYLRTIGYKAWVEDTN
Ga0318541_100153492	3300031545	Soil	MIVKAEGPSGSAKIHSDDPKHALGLAQHLRTIGYNAWIEDTNGNAIVE
Ga0318573_100399885	3300031564	Soil	MIVKAEGPSGRAKIHSDDPKHALGLAQYLRTIGYNAWIKDTNGNE
Ga0318515_105520211	3300031572	Soil	VNMIVKAEGPSGRAKIKSEQPKHALGLVNYLRAIG
Ga0318561_104472361	3300031679	Soil	MIVKAEGPGGHAKIHSDDAKHALGLAQYLRTIGYS
Ga0318560_105626711	3300031682	Soil	VSMFVKAEGPSGRAKIHSDDPRHALGLAQYLRAIGYSAWIEDTNGNEIDEKA
Ga0318560_107619331	3300031682	Soil	MFVKAEGPSGPAKIHSDDPKHALGLVQYLRTIGYSA
Ga0310686_1097569621	3300031708	Soil	MIVKAEGPSGRAKIRSDEPKHALGLVQYLRTIGYSAWIEDTNGNEI
Ga0310686_1111675085	3300031708	Soil	VSMIVKAKAPSGPGKIHSDDPKHAPGLVQYLRTIGYKAWIEDANGKVME
Ga0306917_114969811	3300031719	Soil	MIVKAEGPSGRAKIHSDDPKHALSLAQYLRTIDYNAWIEDTNGNAM
Ga0318502_100292783	3300031747	Soil	SMIVKAEGPSGSAKIHSDDPKHALGLAQHLRTIGYNAWIEDTNGNAIVE
Ga0318502_104689551	3300031747	Soil	MIVKAEGPSGRAKIHSDNPKHALGLAQYLRTIGYNAWIE
Ga0307477_101913163	3300031753	Hardwood Forest Soil	MIVKAEGPSGRAKIHSDDPKHALGLAQYLRTIGYNAWIEDTNGNEIEE
Ga0307477_105324151	3300031753	Hardwood Forest Soil	EGPSGHAKIHSDDPKHALGLAQYLRTIGYNAWIEDTNGNEIDEKKDGDCR
Ga0318554_107117842	3300031765	Soil	MIVKAEGPSGRAKIHSDDPNQALDLVQYLRTIGYDAWIEDTNGNAIDEKGPKDGD
Ga0318526_103579322	3300031769	Soil	MIVNAEGPSRAKIHSEEPKHALGLVQYLRTIGYNAWIEDTNGNAM
Ga0318546_102149602	3300031771	Soil	MIVKAEGPSGSAKIHSDDPKQALGLAQHLRTIGYNAWIEDTNGNAIVE
Ga0318547_101663054	3300031781	Soil	MIVKAEGPSGRAKIHSDDPKHALGLAQYLRTIGYNAWI
Ga0318547_103329512	3300031781	Soil	MSIIVKAEGPSGRAKIHSDDPKHALGLAQYLRTIGYNAWIEDTN
Ga0318552_102323891	3300031782	Soil	MSIIVKAEGPSGRAKIHSDDPKHALGLAQYLRTIGYNAWIEDTNGNEIDEK
Ga0318529_100560811	3300031792	Soil	MIVKAEGPSGRAKIHSDDPKHALGLAQYLRTIGYNAWIEDTN
Ga0318529_101971833	3300031792	Soil	MIVKAEGPGGHAKIHSDDAKHALGLAQYLRTIGYSAWIEDTNGN
Ga0318550_101603201	3300031797	Soil	MSIIVKAEGPSGRAKIHSDDPKHALGLAQYLRTIG
Ga0318550_104689152	3300031797	Soil	MIVKAEGPGGHAKIHSDDPKGALGLAQYLRTIGYSAWIEDT
Ga0318550_105604091	3300031797	Soil	MIVKAEGPSGTAKINSDGPKHALGLVQYLRSIGYEAW
Ga0318523_106325122	3300031798	Soil	MFVKAEGPSGPAKIHSDDPKHALGLVQYLRAIGYNVWIEDANGNEIAKRH
Ga0318567_104516731	3300031821	Soil	MSIIVKAEGPSGRAKIHSDDPKHALGLAQYLRTIGYNAWIEDTNGNEIDE
Ga0310917_102442523	3300031833	Soil	MIVKAEGPSGRAKIHSDDPKHALGLAQYLRTIGYTAWIE
Ga0310917_111071641	3300031833	Soil	MSIIVKAEGPSGRAKIHSDDPKHALGLAQYLRTIGYNAWIEDTNG
Ga0318511_104202821	3300031845	Soil	IVKAEGPSGSAKIHSDDPKHALGLAQHLRTIGYNAWIEDTNGNAIVE
Ga0306919_102331704	3300031879	Soil	MIVKAEGPSGRAKIHSDDPNQALDLVQYLRTIGYDARIEDTNGNAI
Ga0306919_103248921	3300031879	Soil	MIVKAEGPSGPAKIHSDDPKHALGLAQYLRIIGYTAWIED
Ga0318544_102077232	3300031880	Soil	MSIIVKAEGPSGRAKIHSDDPKHALGLAQYLRTIGYNA
Ga0306925_103832701	3300031890	Soil	MIVRAEGPSGRAKLNSDGPKHALGLVQYLRSVGYEAWIEDAE
Ga0306925_106629253	3300031890	Soil	MIVKAEGPGGHAKIHSDDAKHALGLAQYLRTIGYSAWIEDTNGNEIDEK
Ga0318520_101450942	3300031897	Soil	MIVKAEGPNGRAKINSDGPKHALGLVQYLRSIGYEAWIEDADGNE
Ga0310912_108738402	3300031941	Soil	MSASTQREVQPVSMLVKADGPSGRAKIHSDDPRHALGLAQYLRAIGYSAWIEDTNGNEID
Ga0310913_100666534	3300031945	Soil	MFVKAEGPSGRAKIRSDDPKHALGLAQYLRTIGYNAWIEDTNGNSHHEDTPSC
Ga0310913_106306471	3300031945	Soil	MIVKAEGPSGTAKINSDGPKHALGLVQYLRSIGYEAWIEDADGNEIE
Ga0310910_104096883	3300031946	Soil	MIVKAEGPSGRAKIHSDDPKHALGLAQYLRTIGYNAWIEDTNGNEIDEK
Ga0310909_101201765	3300031947	Soil	MIVKANGPSGRAKIRSDDPKHALSLVQYLRTIGYN
Ga0306926_112527262	3300031954	Soil	MIVKAEGPSGRAKIHSDDPKHALSLAQYLRTIDYNAWIEDTNGNEI
Ga0318530_103426341	3300031959	Soil	MFVKAEGPSGPAKIHSDDPKHALGLVQYLRTIGYSAWVEDSNGNE
Ga0307479_107625581	3300031962	Hardwood Forest Soil	PSGRAKIHADDPKHALGLTQYLRTIGYNALIEDTNGNEIDERP
Ga0306922_109085882	3300032001	Soil	MIVKAEGPSGPAKIHSDDPKHALGLAQYLRTIGYS
Ga0306922_120438942	3300032001	Soil	MTIIVKAEGPSGRAKIHSDNPKHALGLAQYLRTIGYNAWIEDA
Ga0318507_102110361	3300032025	Soil	MIVKAEGPSGRAKIHSDDPKHALGLAQYLRTIGYTAWIEDTNGNE
Ga0310911_102360641	3300032035	Soil	MIVKAEGPSGRAKIHSDDPKHALGLAQYLRTIGYNAWIEDTNGNE
Ga0310911_102385604	3300032035	Soil	KAEGPSGPAKIHSDDPKHALGLVQYLRAIGYNVWIEDANGNEIAKRH
Ga0310911_109301911	3300032035	Soil	VSIIVKAEGPSGRAKIRSDDPKHALGLAQYLRTIGYNSWIEDKNGNEI
Ga0318558_106234752	3300032044	Soil	MFVKAEGPSGPAKIHSDDPKHALGLAQYLRTIGYSAWIE
Ga0318533_101486762	3300032059	Soil	MSIIVKAEGPSGRAKIHSDDPKHALGLAQYLRTIGYNAWIEDTNGNGDRRKGPKDGD
Ga0318533_102439703	3300032059	Soil	MFVKAEGPSGRAKIRSDDPKHALGLAQYLRTIGYNAWIED
Ga0318533_103084291	3300032059	Soil	SMFVKAEGPSGRAKIRSDDPKHALGLAQYLRTIGYNAWIEDTNGNSHHEDTPSC
Ga0318504_103871781	3300032063	Soil	MFVKAEGPSGPAKIHSDDPKHALGLAQYLRTIGYSAWIED
Ga0318504_104915621	3300032063	Soil	MIVKAEGPSGPAKIHSDDPKHALGLAQYLRIIGYTAWIEDINGNEIDEK
Ga0318513_104852322	3300032065	Soil	VSMFVKAEGPSGPAKIHSDDPKHALGLVQYLRAIGYNVWIEDANGNEIAKRH
Ga0306924_102009297	3300032076	Soil	MFVKAEGPSGRAKIRSDDPKHALGLAQYLRTIGYNAWIEDTNGNSHHEDT
Ga0306924_105004691	3300032076	Soil	MIVKAEGPSGRAKIHSDDPKHALGLAQYLRTIGYNAWIEDTNGN
Ga0307470_106042921	3300032174	Hardwood Forest Soil	MIVKAEGPSGRAKIHSDDPKHALDLAQYLRTIGYNAWIEDTN
Ga0307470_108527291	3300032174	Hardwood Forest Soil	MVVKAEGPSGPAKIRSHDPKHALGLAQYLRTIGYNAWIEDTSGNAI
Ga0307471_1038761782	3300032180	Hardwood Forest Soil	MSMIVKAKGPSGPAKIHSDDPKHALWLVQYLRTIGYKA
Ga0306920_1036477421	3300032261	Soil	MIVKAEGPSGRAKIHSDELKHALGLVQYLRTIGYEAWI
Ga0310914_106589353	3300033289	Soil	MIVKAEGPSGRAKIHSDDPNQALDLVQYLRTIGYDARIEDTNG
Ga0310914_113132691	3300033289	Soil	MIVKANGPSGRAKIRSDDPKHALSLVQYLRTIGYNAWIED
Ga0318519_103090661	3300033290	Soil	VTMIVKAEGPSGRAKIHSDDPKHALGLAHYLRTIGYNAWIEDT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F042482

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences