Metagenome / Metatranscriptome Family F042434

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F042434
Family Type	Metagenome / Metatranscriptome
Number of Sequences	158
Average Sequence Length	60 residues
Representative Sequence	MAALTQDEIAAKIATAENGLAGATSQYDRNMFTQIRDEYRRYADQRAKDIAKLAAAAP
Number of Associated Samples	97
Number of Associated Scaffolds	158

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	57.43 %
% of genes near scaffold ends (potentially truncated)	24.05 %
% of genes from short scaffolds (< 2000 bps)	51.90 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.71

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (67.722 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (24.051 % of family members)
Environment Ontology (ENVO)	Unclassified (29.747 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.696 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.81% β-sheet: 0.00% Coil/Unstructured: 44.19%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.71
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.71
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.25.1.9: Rv2844-like	d2ib0a1	2ib0	0.86265
a.25.1.2: Ribonucleotide reductase-like	d3n20b_	3n20	0.85905
a.2.6.1: HR1 repeat	d4nkgb_	4nkg	0.85567
a.29.13.1: Bacillus cereus metalloprotein-like	d3dbya2	3dby	0.84873
a.7.14.0: automated matches	d5fvka_	5fvk	0.84224

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 158 Family Scaffolds
PF00202	Aminotran_3	9.49
PF01740	STAS	7.59
PF00982	Glyco_transf_20	6.33
PF13556	HTH_30	3.16
PF13561	adh_short_C2	1.90
PF02909	TetR_C_1	1.90
PF01458	SUFBD	1.27
PF14224	DUF4331	1.27
PF01266	DAO	1.27
PF00487	FA_desaturase	1.27
PF06197	DUF998	1.27
PF01872	RibD_C	1.27
PF00005	ABC_tran	1.27
PF00378	ECH_1	1.27
PF06724	DUF1206	1.27
PF12802	MarR_2	1.27
PF04041	Glyco_hydro_130	1.27
PF00294	PfkB	1.27
PF00355	Rieske	1.27
PF13419	HAD_2	0.63
PF13537	GATase_7	0.63
PF03928	HbpS-like	0.63
PF02467	Whib	0.63
PF03051	Peptidase_C1_2	0.63
PF12697	Abhydrolase_6	0.63
PF02687	FtsX	0.63
PF00753	Lactamase_B	0.63
PF14890	Intein_splicing	0.63
PF04012	PspA_IM30	0.63
PF00296	Bac_luciferase	0.63
PF00930	DPPIV_N	0.63
PF03861	ANTAR	0.63
PF04226	Transgly_assoc	0.63
PF00578	AhpC-TSA	0.63
PF07228	SpoIIE	0.63
PF00196	GerE	0.63
PF02635	DrsE	0.63

COG ID	Name	Functional Category	% Frequency in 158 Family Scaffolds
COG0380	Trehalose-6-phosphate synthase, GT20 family	Carbohydrate transport and metabolism [G]	6.33
COG1309	DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA	Transcription [K]	1.90
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	1.27
COG0719	Fe-S cluster assembly scaffold protein SufB	Posttranslational modification, protein turnover, chaperones [O]	1.27
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	1.27
COG1842	Phage shock protein A	Transcription [K]	1.27
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	1.27
COG2152	Predicted glycosyl hydrolase, GH43/DUF377 family	Carbohydrate transport and metabolism [G]	1.27
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	1.27
COG3371	Uncharacterized membrane protein	Function unknown [S]	1.27
COG0823	Periplasmic component TolB of the Tol biopolymer transport system	Intracellular trafficking, secretion, and vesicular transport [U]	0.63
COG1506	Dipeptidyl aminopeptidase/acylaminoacyl peptidase	Amino acid transport and metabolism [E]	0.63
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.63
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.63
COG3579	Aminopeptidase C	Amino acid transport and metabolism [E]	0.63
COG3707	Two-component response regulator, AmiR/NasT family, consists of REC and RNA-binding antiterminator (ANTAR) domains	Transcription [K]	0.63

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.72 %
All Organisms	root	All Organisms	32.28 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.72 %
cellular organisms	root	All Organisms → cellular organisms	32.28 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.72 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	32.28 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.72 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	29.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.72 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	28.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.72 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	17.09 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.72 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2.53 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	1.90 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.27 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.27 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.63 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.63 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.72 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1.90 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.27 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1.27 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.27 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.63 %
unclassified Pseudonocardiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales	0.63 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.63 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.72 %
Rugosimonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Rugosimonospora	1.27 %
Microtetraspora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microtetraspora	1.27 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.27 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.27 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.63 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.63 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	0.63 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.63 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.72 %
Rugosimonospora africana	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Rugosimonospora → Rugosimonospora africana	1.27 %
Microtetraspora glauca	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microtetraspora → Microtetraspora glauca	1.27 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.27 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.27 %
unclassified Micromonospora	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → unclassified Micromonospora	0.63 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.63 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.63 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.63 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.72 %
Rugosimonospora africana	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Rugosimonospora → Rugosimonospora africana	1.27 %
Microtetraspora glauca	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microtetraspora → Microtetraspora glauca	1.27 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.27 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.27 %
Micromonospora sp. WP24	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → unclassified Micromonospora → Micromonospora sp. WP24	0.63 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.63 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.63 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.63 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.63 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10368021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	876	Open in IMG/M
3300004092\|Ga0062389_100010869	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5911	Open in IMG/M
3300004092\|Ga0062389_103246495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	609	Open in IMG/M
3300004152\|Ga0062386_100115484	Not Available	2072	Open in IMG/M
3300004152\|Ga0062386_100581312	Not Available	914	Open in IMG/M
3300004152\|Ga0062386_100767113	Not Available	793	Open in IMG/M
3300005406\|Ga0070703_10414895	Not Available	589	Open in IMG/M
3300005445\|Ga0070708_100362872	Not Available	1365	Open in IMG/M
3300005445\|Ga0070708_100696448	Not Available	956	Open in IMG/M
3300005536\|Ga0070697_100923132	Not Available	775	Open in IMG/M
3300005591\|Ga0070761_10265346	All Organisms → cellular organisms → Bacteria	1028	Open in IMG/M
3300005591\|Ga0070761_10285376	All Organisms → cellular organisms → Bacteria	991	Open in IMG/M
3300005610\|Ga0070763_10398700	Not Available	773	Open in IMG/M
3300005921\|Ga0070766_10094553	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1761	Open in IMG/M
3300006176\|Ga0070765_101334644	Not Available	676	Open in IMG/M
3300010046\|Ga0126384_10229997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	1486	Open in IMG/M
3300010343\|Ga0074044_10134548	Not Available	1658	Open in IMG/M
3300010379\|Ga0136449_100187531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3963	Open in IMG/M
3300010379\|Ga0136449_102136984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	820	Open in IMG/M
3300010396\|Ga0134126_12578887	Not Available	552	Open in IMG/M
3300011120\|Ga0150983_11117247	Not Available	879	Open in IMG/M
3300012363\|Ga0137390_11419277	Not Available	638	Open in IMG/M
3300017821\|Ga0187812_1007673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3739	Open in IMG/M
3300017822\|Ga0187802_10004901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	4003	Open in IMG/M
3300017823\|Ga0187818_10557686	Not Available	517	Open in IMG/M
3300017926\|Ga0187807_1263911	Not Available	566	Open in IMG/M
3300017926\|Ga0187807_1276083	Not Available	555	Open in IMG/M
3300017926\|Ga0187807_1338553	Not Available	505	Open in IMG/M
3300017928\|Ga0187806_1076577	Not Available	1045	Open in IMG/M
3300017932\|Ga0187814_10002138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7819	Open in IMG/M
3300017932\|Ga0187814_10051476	Not Available	1517	Open in IMG/M
3300017932\|Ga0187814_10103662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1051	Open in IMG/M
3300017932\|Ga0187814_10114748	All Organisms → cellular organisms → Bacteria	997	Open in IMG/M
3300017933\|Ga0187801_10248711	Not Available	714	Open in IMG/M
3300017942\|Ga0187808_10006579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4423	Open in IMG/M
3300017942\|Ga0187808_10241510	Not Available	807	Open in IMG/M
3300017942\|Ga0187808_10476296	Not Available	577	Open in IMG/M
3300017943\|Ga0187819_10016437	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	4250	Open in IMG/M
3300017995\|Ga0187816_10275654	Not Available	736	Open in IMG/M
3300018006\|Ga0187804_10556074	Not Available	519	Open in IMG/M
3300020582\|Ga0210395_10366965	Not Available	1083	Open in IMG/M
3300020583\|Ga0210401_10048249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4025	Open in IMG/M
3300021170\|Ga0210400_11349236	Not Available	570	Open in IMG/M
3300021171\|Ga0210405_10810555	Not Available	717	Open in IMG/M
3300021178\|Ga0210408_10408185	Not Available	1082	Open in IMG/M
3300021180\|Ga0210396_10097482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	2661	Open in IMG/M
3300021180\|Ga0210396_10601592	Not Available	956	Open in IMG/M
3300021180\|Ga0210396_10667844	Not Available	899	Open in IMG/M
3300021181\|Ga0210388_10059800	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3192	Open in IMG/M
3300021401\|Ga0210393_10376489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1157	Open in IMG/M
3300021404\|Ga0210389_10640549	Not Available	834	Open in IMG/M
3300021404\|Ga0210389_11265247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microtetraspora → Microtetraspora glauca	566	Open in IMG/M
3300021405\|Ga0210387_10800963	Not Available	832	Open in IMG/M
3300021433\|Ga0210391_11001231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	651	Open in IMG/M
3300022708\|Ga0242670_1045907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microtetraspora → Microtetraspora glauca	609	Open in IMG/M
3300022708\|Ga0242670_1062975	Not Available	552	Open in IMG/M
3300025922\|Ga0207646_10047260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3859	Open in IMG/M
3300026319\|Ga0209647_1137972	Not Available	1068	Open in IMG/M
3300026551\|Ga0209648_10115459	Not Available	2176	Open in IMG/M
3300027334\|Ga0209529_1004051	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2274	Open in IMG/M
3300027676\|Ga0209333_1028108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1578	Open in IMG/M
3300027812\|Ga0209656_10112410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1415	Open in IMG/M
3300027812\|Ga0209656_10148194	Not Available	1179	Open in IMG/M
3300027853\|Ga0209274_10077339	All Organisms → cellular organisms → Bacteria	1615	Open in IMG/M
3300027889\|Ga0209380_10101077	Not Available	1666	Open in IMG/M
3300027908\|Ga0209006_10744555	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	799	Open in IMG/M
3300028906\|Ga0308309_10651081	Not Available	915	Open in IMG/M
3300029636\|Ga0222749_10436092	Not Available	699	Open in IMG/M
3300030549\|Ga0210257_10222921	Not Available	628	Open in IMG/M
3300030627\|Ga0210269_10096147	All Organisms → cellular organisms → Bacteria → Terrabacteria group	817	Open in IMG/M
3300030738\|Ga0265462_11722858	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	596	Open in IMG/M
3300030738\|Ga0265462_11979095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	566	Open in IMG/M
3300030741\|Ga0265459_12545842	Not Available	631	Open in IMG/M
3300030743\|Ga0265461_12627673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	597	Open in IMG/M
3300030934\|Ga0075391_10382897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	556	Open in IMG/M
3300030973\|Ga0075395_11128468	Not Available	518	Open in IMG/M
3300030973\|Ga0075395_11181360	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	513	Open in IMG/M
3300031122\|Ga0170822_12257269	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	623	Open in IMG/M
3300031231\|Ga0170824_101276438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	847	Open in IMG/M
3300031231\|Ga0170824_109411626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	954	Open in IMG/M
3300031231\|Ga0170824_109584839	Not Available	523	Open in IMG/M
3300031446\|Ga0170820_12640234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	885	Open in IMG/M
3300031446\|Ga0170820_15295002	Not Available	573	Open in IMG/M
3300031469\|Ga0170819_16414585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	790	Open in IMG/M
3300031469\|Ga0170819_17544098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	595	Open in IMG/M
3300031469\|Ga0170819_17606804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	549	Open in IMG/M
3300031474\|Ga0170818_100585463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	823	Open in IMG/M
3300031474\|Ga0170818_105273129	Not Available	515	Open in IMG/M
3300031708\|Ga0310686_110900520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	816	Open in IMG/M
3300031708\|Ga0310686_112915206	Not Available	555	Open in IMG/M
3300031708\|Ga0310686_118893285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2610	Open in IMG/M
3300031823\|Ga0307478_10961689	Not Available	714	Open in IMG/M
3300032160\|Ga0311301_10334083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2389	Open in IMG/M
3300032515\|Ga0348332_13781438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	524	Open in IMG/M
3300032515\|Ga0348332_14092228	Not Available	581	Open in IMG/M
3300032756\|Ga0315742_13590236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → unclassified Micromonospora → Micromonospora sp. WP24	501	Open in IMG/M
3300032895\|Ga0335074_10018439	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	9846	Open in IMG/M
3300032895\|Ga0335074_10190573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Rugosimonospora → Rugosimonospora africana	2519	Open in IMG/M
3300032895\|Ga0335074_10223637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Rugosimonospora → Rugosimonospora africana	2256	Open in IMG/M
3300032895\|Ga0335074_10588491	Not Available	1116	Open in IMG/M
3300032896\|Ga0335075_10956928	Not Available	775	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.75%
Aquatic	Environmental → Aquatic	20.25%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.95%
Freshwater	Environmental → Aquatic → Freshwater	18.35%
Plant Litter	Environmental → Terrestrial → Plant Litter	3.16%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.90%
Cave	Environmental → Terrestrial → Cave	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.67%
Loam	Environmental → Terrestrial → Soil → Loam	25.32%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	18.35%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.96%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	3.16%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.90%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	32.28%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	18.99%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	13.92%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.13%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.33%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.96%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.43%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	3.16%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.90%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.27%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	24.05%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	13.92%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	10.13%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	8.86%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	7.59%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	6.33%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.33%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.80%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	3.16%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.53%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.53%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.27%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.27%
Hypersaline Mat	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Hypersaline Mat	0.63%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.63%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.63%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.63%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.63%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.63%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005861	Ferric oxide microbial mat and aquatic microbial communities from Rainbow Spring, Yellowstone National Park, USA - RS3B (SPADES assembly)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300019162	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU3 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022522	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022708	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027158	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF011 (SPAdes)	Environmental	Open in IMG/M
3300027334	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O2 (SPAdes)	Environmental	Open in IMG/M
3300027676	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030549	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO137-ANR102SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030627	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO153-ARE095SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030738	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VDE Co-assembly	Environmental	Open in IMG/M
3300030741	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ANR Co-assembly	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300030805	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030934	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB3 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030973	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB6 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032756	Forest Soil Metatranscriptomics Site 2 Humus Litter Mineral Combined Assembly	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12712J15308_101126422	3300001471	Forest Soil	LTQDQIAAKIATAESGYAAATSQYNRNVFAQIRDEYKRYAVVRAKEIEKETAAAASTAASSA*
JGI12635J15846_103680212	3300001593	Forest Soil	MAGLTQDEIAAKIATAENGLARATSQYDRNMFTQIREDYRRYADQRAKEIAKLAAAAS*
JGIcombinedJ26739_1003204071	3300002245	Forest Soil	MTALTLDEIAAKIAMTDRRFATATSQYDRNVSAMIRDEYKRYATERANEIAKQAAAANSSAS*
JGIcombinedJ26739_1011071021	3300002245	Forest Soil	HQAHVTMTTLTQDQIAAKIATAESGYAAATSQYNRNVFAQIRDEYKRYAVVRAKEIEKETAAAASTAASSA*
JGIcombinedJ26739_1017172111	3300002245	Forest Soil	MMQGMATLTLDEIAAKIATADSGFAAATSQYDRNVSALIRAEYKRYAAERASEIAKQAAA
JGIcombinedJ51221_100237752	3300003505	Forest Soil	MPCCDDEGMAPLTLEEIATKIATAESGFEAATSQYDRNVFAQIRDEYKRYAAERAKAIAQHAAAAGSSAS*
Ga0062389_1000108692	3300004092	Bog Forest Soil	MDTLTLDQIATKIATAELGLTTETGIYERNMLTQIRDEYRRYATERGKQEAKLAAAAAEAAELAKGR*
Ga0062389_1032464952	3300004092	Bog Forest Soil	VPWLDACANGPRLMSMSTLTLDQIAAKIATAEKGLATATSPYERNLLTQIRDEYQRYATERGKQEAKLAANAAS*
Ga0062386_1001154843	3300004152	Bog Forest Soil	MSTLTLEEISARIATAQAGLASAATQYDRNMFTQIIGEYQRYADERSKEIAKVAAAAS*
Ga0062386_1005813122	3300004152	Bog Forest Soil	MSMSTLTLDQIAAKIATAEKGLATATSPYERNLLTQIRDEYQRYATERGKQEAKLAANAAS*
Ga0062386_1007671131	3300004152	Bog Forest Soil	NRSSVTGMDTLTLDQIAAKIATAETGLASATDGYDRNLLIQIRDEYRRYATERGKQEAKLAAAAAEAAAS*
Ga0070703_104148951	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	VSALTLEEIVAKIATAEAGLASATTQYDRNVFTEIIGEYRRYADERAKEIAKLAAAAS*
Ga0070708_1003628721	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	LEEIAAKIATAEAGLASATTQYDRNVFTQIIGEYRRYADERAKEIAKLAAAAS*
Ga0070708_1006964482	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VSALTLEEIAAKIATAEAGLASATTQYDRNVFTEIIGEYRRYADERAKEIAKLAAAAS*
Ga0070708_1021134591	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MAALTLEQIEAKIATAERGFAAAVSQYDRNVFAQIRDEYKRYAEERAKELAKQAATVSSSAS*
Ga0070707_1018774352	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MTSLTQDQIAVKIATAESGFAAATSQYDRNVFAQIRDEYKRYAAERAKEIDRQAAAASSAAS*
Ga0070699_1002186612	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	EAGLASATTQYDRNVFTEIIGEYRRYADERAKEIAKLAAGAS*
Ga0070697_1009231321	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VSALTLEEIAAKIATAEAGLASATTQYDRNVFTQIIGEYRRYADERAKEIAKLAAAAS*
Ga0070761_102653461	3300005591	Soil	MAALTQDEIATKIATAEDGLAKATSQYERNVYTQIRDEYRRYADQRAKEIAKLAAAAAS*
Ga0070761_102853761	3300005591	Soil	MAGLTQEEIAAKIATAENGLARATSQYDRNMFTQIREDYRRYADQRAKEIAKLAAAAS*
Ga0070761_103648691	3300005591	Soil	PASTRCCHDAGMTALTLDEIAAKIAMTDRRFAAATSQYDRNVSAMIRDEYKRYATERANEIAKQAAAANSSAS*
Ga0070762_100038683	3300005602	Soil	MTALTLDEIAAKIAMTDRRFAAATSQYDRNVSAMIRDEYKRYATERANEIAKQAAAANSSAS*
Ga0070763_103987003	3300005610	Soil	PTLRGMSTLTLDQIAAKIATAENGLATATSPYERNLLTQIRDEYQRYAAERTKQEAKLAAAAAG*
Ga0070763_104241502	3300005610	Soil	MAPLTLEEIATKIATAESGFEAATSQYDRNVFAQIRDEYKRYAAERAKAIAQHAAAAGSSAS*
Ga0070764_111089641	3300005712	Soil	TALTLDEIAAKIAAAESGFASATSQYDRNVSAMIRDEYKRYAAERANEIAKQAAAVSSSAS*
Ga0080006_11323097	3300005861	Hypersaline Mat	MAVLTLEEIAAKIATAESGFAAATSQYDRNMFAQIRDEYKRYAAERAKQIAKQAAAATSSAS*
Ga0070766_100110757	3300005921	Soil	MTALTLDEIAAKIAMTDRRFAAATSQYDRNVSAMIRDEYKRYATERAKEIAKQAAAANSSAS*
Ga0070766_100945532	3300005921	Soil	MSTLTLDQIAAKIATAEQGLATSTDPYDRNVLAQIRDEYQRYSTERGKQEAKLAAAAAEAAG*
Ga0070717_120252822	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MAALTLEQIEAKIATAERGFAAAVSQYDRNVFAQIRDEYKRYAEERAKELAKQAAAVSSSGS*
Ga0070765_1013346441	3300006176	Soil	TLTLEQIAAKIATAEKGLATATTPYDRNLLTQIRDEYQRYAVERGKAEAKLAAAAAAG*
Ga0102924_10428293	3300007982	Iron-Sulfur Acid Spring	MTALAPEEIAAKIATAERGFAAATSQYNRNVFAQIRDEYKRYAAERANEIAKQASAASSSAS*
Ga0126384_102299971	3300010046	Tropical Forest Soil	VSPLTLEQIAAKIAVAEAGLAAATTQYDRNMFAQIRDEYRRYAAERTKQIAKAAAASDGQISD*
Ga0126373_1000299311	3300010048	Tropical Forest Soil	VSALTLDEIAAKIATAERRLAEASTQYDRNVCAGIRDEYKRYAEARAKQLANGEASAT*
Ga0074044_101345482	3300010343	Bog Forest Soil	MAALTLDEIAVKIATADRRFAAATSQYDRNVSAMIRNEYKRYAAERAKEIAKQAAAVSSSAS*
Ga0126378_102796293	3300010361	Tropical Forest Soil	VSALTLDEIAAKIAMAERRLAEATTQYDRNVCAQIRDEYKRYAEARAKQLANGEASAT*
Ga0136449_1001875311	3300010379	Peatlands Soil	MGALTQDEIAAKIATAENGLARATTQYERNMLTQIRDEYRRYADQRAKEEAKLVAGAAS*
Ga0136449_1021369842	3300010379	Peatlands Soil	VGTLTQEQIAAKIATAEAGLAMAQTPYDRNVYSPIIGEYRAYAAERTKQIAKLAAAS*
Ga0136449_1034351162	3300010379	Peatlands Soil	RIATAEAGLASATKRYERNMFTQIIGEYRRYADERAKEISKLAAAP*
Ga0134126_125788872	3300010396	Terrestrial Soil	MDGLTQDEITTKIAIAEKGLAGATSQYDRNMFTQIRDDYRRYADRRAKETAKLAA
Ga0150983_111172472	3300011120	Forest Soil	MTALTLDEIAAKIARAEGGFAAATSQYDRNLFAQIRDEYKHYADERAKAIQKQIAATPSPAS*
Ga0137390_114192771	3300012363	Vadose Zone Soil	VSALTIEEIAAKIATAEAGAASATTQYDRNVFTQIIGEYRRYADERAKEIAKLAAAAS*
Ga0187812_10076733	3300017821	Freshwater Sediment	MAALTQDQIAAKIATAEHGLATATTQYDRNVCGQIRDEYKRYANERAKQIAKLAAADGQPHH
Ga0187802_100049011	3300017822	Freshwater Sediment	VVTALTPDQIAVKIATAEAGLASATNQYDRNAFAQVRDEYQRYAAERAKQIAKATAASD
Ga0187818_105576861	3300017823	Freshwater Sediment	SMAALTQDEIATKIATAENGLATATSQYDRNMFTQICEEYRRYADQRAKEIAKLAAAAS
Ga0187820_11610071	3300017924	Freshwater Sediment	MAAMTLEEIAVKIATAESGFAAAKSQYDRNMFAQIRDEYTRYAAARAKEIAKQAAAASSSTS
Ga0187807_12639111	3300017926	Freshwater Sediment	MAALTQDEIAAKIATAEDGLARATSQYDRNMFIQIRDEYRRYADQRAKEIEKLAAAAS
Ga0187807_12760831	3300017926	Freshwater Sediment	MAALRQDEIATKIATAENGLARATSQYDRNTFTQIRDEYRRYADQRAKEIAELAAGAAS
Ga0187807_13385531	3300017926	Freshwater Sediment	MAALTQDEIAAKIATAENGLAGATSQYDRNMFTQIRDEYRRYADQRAKDIAKLAAAAP
Ga0187806_10765771	3300017928	Freshwater Sediment	MAALTQDEIATKIATAENGLATATSQYDRNMFTQIRDEYRRHADQRAKEIAKLAAAAS
Ga0187814_1000213810	3300017932	Freshwater Sediment	MAALTQDQIAAKIATAEHGLATATTQYDRNVCGQIRDEYKRYANERAKQIAKLAAADGQPHQ
Ga0187814_100514761	3300017932	Freshwater Sediment	MAALTQDEIATKIATAEDGLARATSQYDRNMFIQIRDEYRRHADQRAKEIAKLAAAAS
Ga0187814_101036622	3300017932	Freshwater Sediment	MAALTQDQIAAKIATAEAALATAATQYERNVYAQIIGEYQRYAGDRAKQIAKLAAAAN
Ga0187814_101147481	3300017932	Freshwater Sediment	MAPLTQDEIAAKIATAEDGLARATSQYDRNMFTQIRDEYRRYADQRAKDIAKLAATES
Ga0187801_102487112	3300017933	Freshwater Sediment	MAALTQDQIAAKIATAEHGLATATTQYDRNVCGQIRDEYKLYANERAKQIAKLAAADGQPHQ
Ga0187808_100065794	3300017942	Freshwater Sediment	MAALTQDEIATKIKTAEDGLARATSQYDRNMFTQIRDEYRRYADQRAKDIAKLTAAAP
Ga0187808_102415102	3300017942	Freshwater Sediment	MAALTQDEIATKIATAENGLANATSQYDRNMFSQIRDEYRRYADQRAKEIGKLAA
Ga0187808_104762961	3300017942	Freshwater Sediment	MAPQSQDEIATKIATAENGLARATSQYDRNMFTQIRDEYRRYAEHRAKEIAKSAVGAKS
Ga0187819_100164376	3300017943	Freshwater Sediment	MAALTQDEIATKIATAENGLARATSQYDRNMFTQIRDEYRRHADQRAKEIAKLAAAAS
Ga0187816_102756541	3300017995	Freshwater Sediment	IAAKIATAEHGLATATTQYDRNVCGQIRDEYKRYANERAKQIAKLAAADGQPHQ
Ga0187804_105560741	3300018006	Freshwater Sediment	KIAAKIATAEHGLATATTQYDRNVCGQIRDEYKRYANERAKQIAKLAAADGQPHQ
Ga0187805_100543144	3300018007	Freshwater Sediment	MAALTLEEIAAKIAMAESGFAAAKTQYDRNVFAHIRDEYKRYAAERAKEIAKQAAAGDSSAS
Ga0187805_106021851	3300018007	Freshwater Sediment	DEIAAKIARAEAGFAAATSQYDRNVLAQIRDEYKRYAAERAAEIAKQAPAAGSSGS
Ga0187805_106437081	3300018007	Freshwater Sediment	VSALTLEQIAEKIATAEAGLAAATTQYDRNVFAQIRDEYRRYAAERAKQIAKAAAASNGQISSD
Ga0184597_1076461	3300019162	Soil	MATLTLDEIAAKIATADSGFAAATSQYDRNVSALIRAEYKRYATERANEIAKQAAAVSSSAS
Ga0210395_1000513210	3300020582	Soil	MAPLTLEEIATKIATAESGFEAATSQYDRNVFAQIRDEYKRYAAERAKAIAQHAAAAGSSAS
Ga0210395_103669652	3300020582	Soil	MDTLTLDQIATKIATAELGLTTATGIYERNMLTQIRDEYRRYATERAKQEAKLAAAAAEVAELAAAR
Ga0210401_100482492	3300020583	Soil	MAALTQDEIAAKIATAEAGLARATTQYDRNMFTQIRDEYRRYADQRAKDIAKLDAAAS
Ga0210400_113492361	3300021170	Soil	MDTLTLDQIATKIATAELGLTTATGIYERNMLTQIRDEYRRYATERAKQEAKLAAAAAEV
Ga0210405_108105552	3300021171	Soil	MSTLTLDQIKAKIATAEQGLATATDPYDRNVLAQIRDEYQRYSTERTKQEAKLAAAAAEAAG
Ga0210408_104081852	3300021178	Soil	MDTLTLDQIATKIATAELGLTTATGIYERNMLTQIRDEYRRYATERGKQEAKLAAAAAEVAELAAAR
Ga0210396_100974821	3300021180	Soil	MAALTLDEIAIKIATAENGLAGATSQYDRNMFTQIRDEYRRYADQRAKDIASSAAPAS
Ga0210396_106015922	3300021180	Soil	MDTLTLDQIATKIATAELGLTTETGIYERNMLTQIRDEYRRYATERGKQEAKLAAAAAEAAEL
Ga0210396_106678441	3300021180	Soil	REKGSSLRSMDTLTLDQIATKIATAELGLTTATGIYERNMLTQIRDEYRRYATERGKQEAKLAAAAAEVAELAAAR
Ga0210396_116231131	3300021180	Soil	MTALTLDEIAAKIAAAESGFASATSQYDRNVSAMIRDEYKRYATERANEIAKQAAAANSSAS
Ga0210388_100598003	3300021181	Soil	MDTLTLDQIATKIATAELGLTTETGIYERNMLTQIRDEYRRYATERGKQEAKLAAAAAEAAELAKGR
Ga0210388_106242702	3300021181	Soil	MTALTLDEIAAKIAAAESGFASATSQYDRNVSAMIRDEYKRYAAERANEIAKQAAAVSSS
Ga0210393_103764892	3300021401	Soil	VSTLTQDEIAAKIATAEASLALATRQYERNMFTQIIGEYQRYSSERAKQIAKLAES
Ga0210385_108187563	3300021402	Soil	MTALTLDEIAAKIAMTDRRFAAATSQYDRNVSAMIRDEYKRYATERANEIAKQAAAANSSAS
Ga0210389_106405491	3300021404	Soil	SMDTLTLDQIATKIATAELGLTTATGIYERNMLTQIRDEYRRYATERGKQEAKLAAAAAEVAELAAAR
Ga0210389_112652473	3300021404	Soil	IKIATAENGLAGATSQYDRNMFTQIRDEYRRYADQRAKDIAKLDAAAS
Ga0210387_108009632	3300021405	Soil	LTLDQTATKIATAELGLTTETGIYERNMLTQIRDEYRRYATERGKQEAKLAAAAAEAAELAKGR
Ga0210386_101883572	3300021406	Soil	MPCCDDEGMAPLTLEEIATKIATAESGFEAATSQYDRNVFAQIRDEYKRYAAERAKAIAQHAAAAGSSAS
Ga0210383_113083222	3300021407	Soil	MTTLTQEEIAGKIATAESGFAAATTGYDRNLFAQIRDEYKRYAVERAKEEAKLATAASAAAS
Ga0210391_110012312	3300021433	Soil	VSTLTQEEIAAKIATAEASLALATRQYERNMFTQIIGEYQRYSSERAKQIAKLAEP
Ga0210390_102718111	3300021474	Soil	MTALTLDEIAAKIAAAESGFASATSQYDRNVSAMIRDEYKRYAAERANEIAKQAAAVSSSAS
Ga0187846_104265101	3300021476	Biofilm	MAALTLEEIAAKIATAENGFAAATSQYDRNVFAQIRDEYKRYAAERAKEIAKQAGAATSAAS
Ga0210398_100984393	3300021477	Soil	CCNDEGMAPLTLEEIATKIATAESGFEAATSQYDRNVFAQIRDEYKRYAAERAKAIAQHAAAAGSSAS
Ga0210398_102352383	3300021477	Soil	MTALTLDEIAAKIAAAESGFASATSQYDRNVSAMIRDEYKRYATERANEIAKQAAAVSSSAS
Ga0210402_100170853	3300021478	Soil	MSALTPDEITAKIAIAERRLAAATTQSERNVLAQIRDEYKRYAQARAKQLANGEVSAT
Ga0210402_100540345	3300021478	Soil	MTALTLEEIAAKIATAETGIAAATSQYNRNVFVQMRDEYKRYAAERAKQIEQAAAASSS
Ga0126371_100718641	3300021560	Tropical Forest Soil	VSALTLDEIAAKIAMAERRLAEATTQYDRNVCAQIRDEYKRYAEARAKQLANGEASAT
Ga0242659_10333191	3300022522	Soil	LEEIATKIATAESGFEAATSQYDRNVFAQIRDEYKRYAAERAKAIAQHAAAAGSSAS
Ga0212123_101569652	3300022557	Iron-Sulfur Acid Spring	MTALAPEEIAAKIATAERGFAAATSQYNRNVFAQIRDEYKRYAAERANEIAKQASAASSSAS
Ga0242670_10459073	3300022708	Soil	DEIAAKIATAEAGLARATTQYDRNMFTQIRDEYRRYADQRAKDIAKLDAAAS
Ga0242670_10629751	3300022708	Soil	QIATKIATAELGLTTATGIYERNMLTQIRDEYRRYATERAKQEAKLAAAAAEVAELAAAR
Ga0207646_100472606	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MAALTLEQIEAKIATAERGFAAAVSQYDRNVFAQIRDEYKRYAEERAKELAKQAAAVSSS
Ga0207646_115312582	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MTSLTQDQIAVKIATAESGFAAATSQYDRNVFAQIRDEYKRYAAERAKEIDRQAAAASSAAS
Ga0209647_11379722	3300026319	Grasslands Soil	VLTLEEIAAKIATAEAGLASAATQYDRNVFTQIIGEYRRYADERAKEIAKLAAAAS
Ga0209648_101154592	3300026551	Grasslands Soil	MAALTQDEIATKIATAENGLARATSQYDRNVFTQICEEYRRYADQRAKEIVKLAAAES
Ga0208725_10053962	3300027158	Forest Soil	MPCCNDEGMAPLTLEEIATKIATAESGFEAATSQYDRNVFAQIRDEYKRYAAERAKAIAQHAAAAGSSAS
Ga0209529_10040514	3300027334	Forest Soil	MAALTLDEIAAKIAMADSRFAAATSQYDRNVSALIRAEYKRYATERANEIAKQAAAVSSSAS
Ga0209333_10281082	3300027676	Forest Soil	MAGLTQDEIAAKIATAENGLARATSQYDRNMFTQIREDYRRYADQRAKEIAKLAAAAS
Ga0209656_101124101	3300027812	Bog Forest Soil	MSTLTLEEISARIATAQAGLASAATQYDRNMFTQIIGEYQRYADERSKEIAKVAAAAS
Ga0209656_101481942	3300027812	Bog Forest Soil	MSTLTLDQIAAKIATAEKGLATATSPYERNLLTQIRDEYQRYATERGKQEAKLAANAAS
Ga0209274_100366124	3300027853	Soil	MTALTLDEIAAKIAAAESGFAAATSQYDRNVSAMIRDEYKRYAAERTSEIA
Ga0209274_100773393	3300027853	Soil	MAGLTQEEIAAKIATAENGLARATSQYDRNMFTQIREDYRRYADQRAKEIAKLAAAAS
Ga0209380_101010772	3300027889	Soil	MSTLTLDQIAAKIATAEQGLATSTDPYDRNVLAQIRDEYQRYSTERGKQEAKLAAAAAEAAG
Ga0209380_101065293	3300027889	Soil	MTALTLDEIAAKIAMTDRRFAAATSQYDRNVSAMIRDEYKRYATERAKEIAKQAAAANSSAS
Ga0209624_105678131	3300027895	Forest Soil	MTALTLDEIAAKIAMTDRRFATATSQYDRNVSAMIRDEYKRYATERANEIAKQAAAANSSAS
Ga0209624_109707271	3300027895	Forest Soil	MMQGMATLTLDEIAAKIATADSGFAAATSQYDRNVSALIRAEYKRYAAERASEIA
Ga0209006_100126778	3300027908	Forest Soil	MTTLTQDQIAAKIATAESGYAAATSQYNRNVFAQIRDEYKRYAVVRAKEIEKETAAAASTAASSA
Ga0209006_107445551	3300027908	Forest Soil	MATLTLDQIAAKIATAEKGLATATTPYDRNLLTQIRDEYQRYAVERGKAEAKLAAAAAAG
Ga0308309_106510811	3300028906	Soil	MDTLTLDQIATKIATAELGLTTETGIYERNMLTQIRDEYRRYATERGKQEAKLAAAAAE
Ga0308309_117933052	3300028906	Soil	VTMATLTQDEIAAKIATAESSYAAATSQYNRNVFAQIRDEYKRYAVQRAKEIERETAAAVSTAASSP
Ga0222749_104360922	3300029636	Soil	TLDQIATKIATAELGLTTATGIYERNMLTQIRDEYRRYATERAKQEAKLAAAAAEVAELAAAR
Ga0210257_102229211	3300030549	Soil	ALTQDEIATKIATAENSLATATSQYDQNMFTQIRDEYRRYADQRAKEAAKVAAAAS
Ga0210269_100961472	3300030627	Soil	GGLTQDEIAAKIATAENGLARATSQYDRNMFTQLRDDYQRYADRRAKEIAKLGIVASA
Ga0265462_117228581	3300030738	Soil	AKIVTAEAGLAEATTDYQRNLLAQIRDEYKHYAEERAKEIAKLAAAAS
Ga0265462_119790952	3300030738	Soil	TLDQIATKIATAELGLTTATGIYERNMLIQIRDEYRRYATERGKQEAKLAAAAAEVAEAAAGR
Ga0265459_125458421	3300030741	Soil	AALTQDEIATKIATAENSLATATSQYDQNMFTQIRDEYRRYADQRAKEAAKVAAAAS
Ga0265461_126276731	3300030743	Soil	EIAAKIATAENGLARATSQYDRNMFTQLRDDYQRYADRRAKEIAKLGIVASA
Ga0265756_1160602	3300030805	Soil	MATLTQDEIAVKIATAESGYAAATSQYDRNVFAQIRDEYKRYAVQRAKEIERETAAAASTAASSD
Ga0075391_103828971	3300030934	Soil	DEIAAKIATAESSLAKATSQYDRNMFTQIRDEYRRYADQRAKDIAKLAAAAS
Ga0075395_111284681	3300030973	Soil	VSPLTLEQIAAKIAVAEAGLAAATTQYDRNMFAQIRDEYRRYAAERTKQIAKAAAASDGQISD
Ga0075395_111813602	3300030973	Soil	LTQDEIAAKIAIAENGLARATSQYDRNMFTQIRDDYRRYADRRAKEIAKLAASGS
Ga0170822_122572691	3300031122	Forest Soil	DEIAAKIATAEAGLARATSQYDRNMFTQIRDEYRRYADQRAKDIAKLAAAAS
Ga0170824_1012764381	3300031231	Forest Soil	MDALTQDEIAAKIAIAENGLARATSQYDRNMFTQIRDDYRRYADRRAKEIAKLAASGS
Ga0170824_1094116261	3300031231	Forest Soil	PLTLEQIAAKIAVAEAGLAAATTQYDRNMFAQIRDEYRRYAAERTKQIAKAAAASDGQIS
Ga0170824_1095848392	3300031231	Forest Soil	ATLTLDQIAAKIATAEKGLATATTPYDRNLLTQIRDEYQRYAVERGKAEAKLAADAAS
Ga0170820_126402342	3300031446	Forest Soil	MDTLTLDQIAAKIATAERGLATAIDPYDRNMLIQIRDEYRRYAVERGKQEAKRAAAAAEVATPAAG
Ga0170820_152950021	3300031446	Forest Soil	MAALTQDEIAAKIATAEAGLARATSQYDRNMFTQIRDEYRRYADQRAKDIAKLDAAAS
Ga0170819_164145852	3300031469	Forest Soil	MAALTQDEIATKIATAEKGLAGAISQYDRNMFTQIRDEYRRYADQLAKETAKLAAAAS
Ga0170819_175440982	3300031469	Forest Soil	DSLTQDEIAAKIAIAENGLARATSQYDRNMFTQIRDDYRRYADRRAKEIAKLAASGS
Ga0170819_176068042	3300031469	Forest Soil	QIATKIATAERGLATATDPYDRNMLIQIRDEYRRYAVERGKQEAKRAAAAAEVATPAAG
Ga0170818_1005854632	3300031474	Forest Soil	AAKIAVAEAGLAAATTQYDRNMFAQIRDEYRRYAAERTKQIAKAAAASDGQISD
Ga0170818_1052731291	3300031474	Forest Soil	EQIAAKIAVAEAGLAAATTQYDRNMFAQIRDEYRRYAAERTKQIAKAAAASDGQISD
Ga0310686_1002769822	3300031708	Soil	MAAMTLEEIAGKIATAESGFAAATSQYDRNVFAQIRDEYKRHATERGKEIARVAAAASSS
Ga0310686_1109005202	3300031708	Soil	MDTLTLDQIATKIATAELGLTTETGIYERNMLIQIRDEYRRYATERGKQEAKLAAAAAEAAELAKGR
Ga0310686_1129152062	3300031708	Soil	MSALTLDQIAAKIATAENGLATVTNPYERNLLTQIRDEYQRYAVERGKQEAKLAAAAAG
Ga0310686_1188932852	3300031708	Soil	MSTLTLDQIAAKIATAENGLATATSPYERNLLTQIRDEYQRYAAERTKQEAKRAAAAAG
Ga0307478_109616891	3300031823	Hardwood Forest Soil	MAALTQDEIAAKIATAENSLARATSQYDRNMFTQIRDEYQRYADQRAKELEKLAAAAS
Ga0311301_103340831	3300032160	Peatlands Soil	MGALTQDEIAAKIATAENGLARATTQYERNMLTQIRDEYRRYADQRAKEEAKLVAGAAS
Ga0348332_100951852	3300032515	Plant Litter	TLEEIAGKIATAESGFAAATSQYDRNVFAQIRDEYKRHATERGKEIARVAAAASSSA
Ga0348332_105565881	3300032515	Plant Litter	MATLTQDEIAVKIATAESGYAAATSQYNRNVFAQIRDEYKRYAVQRAKEIERETAAAASATASSA
Ga0348332_131110212	3300032515	Plant Litter	TLEEIAGKIATAESGFAAATSQYDRNVFAQIRDEYKRHATERGKEIARVAAAASASA
Ga0348332_137814381	3300032515	Plant Litter	QIATKIATAELGLTTATGIYERNMLIQIRDEYRRYATERGKQEAKLAAAAAEAAAGR
Ga0348332_140922281	3300032515	Plant Litter	TLTQEEIAAKIATAEASLALATRQYERNMFTQIIGEYQRYSSERAKQIAKLAEP
Ga0315742_135902361	3300032756	Forest Soil	GLTQDEIAAKIATAENGLARATSQYDRNMFTQLRDDYRRYADRRAKEMAKLGNGASA
Ga0335074_100184396	3300032895	Soil	MAPLTQDEIAAKIATAENALARATSQYDRNMFTQIRDEYRRYADQRAKETEKLAAAAS
Ga0335074_100192428	3300032895	Soil	MAALTLEEIAAKIATAESGFATATSQYERNVFAQIRDEYKRYAAERAKQMKQAPAASSSA
Ga0335074_100445149	3300032895	Soil	MTALTLEQIAARIATAQSGFVAATSQYDRNVFAQIRGEYRRYAAECAEELERQAAAASSAAP
Ga0335074_101905734	3300032895	Soil	MATLTQDEIATKIATAEDCLARATSQYDRNMFTQIRDEYQRYADQRAKDIAKLAAAP
Ga0335074_102236372	3300032895	Soil	MAPLTQDEIAAKIAAAEDGLAGATSQYDRNMFTQIRDEYRRYADQRAKEIAKLAAAAS
Ga0335074_105884912	3300032895	Soil	MAPLTQDEIAAKIATAENSLARATSQYDRNMFTQIRDEYQRYADQRAKEIGKLAAAAS
Ga0335075_101067327	3300032896	Soil	TLEQIAARIATAQSGFVAATSQYDRNVFAQIRGEYRRYAAECAEELERQAAAASSAAP
Ga0335075_105782451	3300032896	Soil	MTALTLEQIAARIATAQSGFVAATSQYDRNVFAQIRGEYRRYAAECTEELER
Ga0335075_109569281	3300032896	Soil	QIAAKIATAEAGLAAATTDYDRNVFAQIRDEYQRYAAERTKQIAKAAAASNEQISSD
Ga0335075_117212541	3300032896	Soil	MAAMTLDEIAAKIATAEIGLAAATSQYGRNVFAQIRDEYRRYAAERAKEIAKQAVAASPSAS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F042434

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences