Metagenome Family F042270

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F042270
Family Type	Metagenome
Number of Sequences	158
Average Sequence Length	85 residues
Representative Sequence	MTKNKTREGPLPPPDKGVNDARPGLPTPTVRKNVTWVQPEPTTSDITRPQQLSPDTTWAEPSTAKSKLAKGSPGLSTTRDQTKE
Number of Associated Samples	86
Number of Associated Scaffolds	158

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Archaea
% of genes with valid RBS motifs	79.11 %
% of genes near scaffold ends (potentially truncated)	32.91 %
% of genes from short scaffolds (< 2000 bps)	65.19 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.16

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Archaea (87.975 % of family members)
NCBI Taxonomy ID	2157
Taxonomy	All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (57.595 % of family members)
Environment Ontology (ENVO)	Unclassified (77.848 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (80.380 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 2.68% β-sheet: 0.00% Coil/Unstructured: 97.32%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.16
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.16
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 158 Family Scaffolds
PF04480	DUF559	2.53
PF14622	Ribonucleas_3_3	2.53
PF13589	HATPase_c_3	1.90
PF01850	PIN	1.90
PF13361	UvrD_C	1.90
PF00580	UvrD-helicase	1.90
PF13456	RVT_3	1.90
PF00692	dUTPase	1.27
PF01351	RNase_HII	1.27
PF07510	DUF1524	1.27
PF00075	RNase_H	1.27
PF13659	Obsolete Pfam Family	1.27
PF01966	HD	1.27
PF01844	HNH	0.63
PF01170	UPF0020	0.63
PF13419	HAD_2	0.63
PF14236	DUF4338	0.63
PF08241	Methyltransf_11	0.63
PF12161	HsdM_N	0.63
PF02310	B12-binding	0.63
PF01939	NucS	0.63
PF00296	Bac_luciferase	0.63
PF01638	HxlR	0.63
PF13414	TPR_11	0.63
PF04140	ICMT	0.63
PF02195	ParBc	0.63
PF10923	BrxC_BrxD	0.63
PF14338	Mrr_N	0.63
PF00271	Helicase_C	0.63
PF01180	DHO_dh	0.63
PF00145	DNA_methylase	0.63
PF01243	Putative_PNPOx	0.63
PF00903	Glyoxalase	0.63

COG ID	Name	Functional Category	% Frequency in 158 Family Scaffolds
COG3973	DNA helicase IV	Replication, recombination and repair [L]	1.90
COG0210	Superfamily I DNA or RNA helicase	Replication, recombination and repair [L]	1.90
COG1074	3Ã¢â‚¬â„¢-5Ã¢â‚¬â„¢ helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	Replication, recombination and repair [L]	1.90
COG0164	Ribonuclease HII	Replication, recombination and repair [L]	1.27
COG0717	dCTP deaminase	Nucleotide transport and metabolism [F]	1.27
COG0756	dUTP pyrophosphatase (dUTPase)	Defense mechanisms [V]	1.27
COG1039	Ribonuclease HIII	Replication, recombination and repair [L]	1.27
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	0.63
COG1092	23S rRNA G2069 N7-methylase RlmK or C1962 C5-methylase RlmI	Translation, ribosomal structure and biogenesis [J]	0.63
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.63
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.63
COG2263	Predicted RNA methylase	General function prediction only [R]	0.63
COG2264	Ribosomal protein L11 methylase PrmA	Translation, ribosomal structure and biogenesis [J]	0.63
COG2265	tRNA/tmRNA/rRNA uracil-C5-methylase, TrmA/RlmC/RlmD family	Translation, ribosomal structure and biogenesis [J]	0.63
COG2813	16S rRNA G1207 or 23S rRNA G1835 methylase RsmC/RlmG	Translation, ribosomal structure and biogenesis [J]	0.63
COG2890	Methylase of polypeptide chain release factors	Translation, ribosomal structure and biogenesis [J]	0.63
COG4123	tRNA1(Val) A37 N6-methylase TrmN6	Translation, ribosomal structure and biogenesis [J]	0.63
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.63
COG1637	Endonuclease NucS, RecB family	Replication, recombination and repair [L]	0.63
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	0.63
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	0.63
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	0.63
COG0286	Type I restriction-modification system, DNA methylase subunit	Defense mechanisms [V]	0.63
COG0270	DNA-cytosine methylase	Replication, recombination and repair [L]	0.63
COG0167	Dihydroorotate dehydrogenase	Nucleotide transport and metabolism [F]	0.63
COG0116	23S rRNA G2445 N2-methylase RlmL	Translation, ribosomal structure and biogenesis [J]	0.63
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	0.63

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.20 %
Unclassified	root	N/A	3.80 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.30 %
Unclassified	root	N/A	3.80 %
Viruses	superkingdom	All Organisms → Viruses	1.90 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	87.97 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	6.33 %
Unclassified	root	N/A	3.80 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.90 %

Name	Rank	Taxonomy	Distribution
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	15.19 %
Unclassified	root	N/A	3.80 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.53 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.90 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	0.63 %

Name	Rank	Taxonomy	Distribution
Candidatus Bathyarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	14.56 %
Unclassified	root	N/A	3.80 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.90 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.90 %
Candidatus Altiarchaeota	phylum	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Altiarchaeota	0.63 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.63 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Bathyarchaeota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota	14.56 %
Unclassified	root	N/A	3.80 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	1.90 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.90 %
Candidatus Altiarchaeales	order	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Altiarchaeota → Candidatus Altiarchaeales	0.63 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.63 %

Name	Rank	Taxonomy	Distribution
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	14.56 %
Unclassified	root	N/A	3.80 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	1.90 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.90 %
unclassified Candidatus Altiarchaeales	no rank	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Altiarchaeota → Candidatus Altiarchaeales → unclassified Candidatus Altiarchaeales	0.63 %
Actinopolysporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinopolysporales	0.63 %

Name	Rank	Taxonomy	Distribution
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	14.56 %
Unclassified	root	N/A	3.80 %
Listeriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Listeriaceae	1.90 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.90 %
Candidatus Altiarchaeales archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Altiarchaeota → Candidatus Altiarchaeales → unclassified Candidatus Altiarchaeales → Candidatus Altiarchaeales archaeon	0.63 %
Actinopolysporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinopolysporales → Actinopolysporaceae	0.63 %

Name	Rank	Taxonomy	Distribution
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	14.56 %
Unclassified	root	N/A	3.80 %
Listeria	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Listeriaceae → Listeria	1.90 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.90 %
Actinopolyspora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinopolysporales → Actinopolysporaceae → Actinopolyspora	0.63 %
Candidatus Altiarchaeales archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Altiarchaeota → Candidatus Altiarchaeales → unclassified Candidatus Altiarchaeales → Candidatus Altiarchaeales archaeon	0.63 %

Name	Rank	Taxonomy	Distribution
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	14.56 %
Unclassified	root	N/A	3.80 %
Listeria grandensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Listeriaceae → Listeria → Listeria grandensis	1.90 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.90 %
Actinopolyspora mzabensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinopolysporales → Actinopolysporaceae → Actinopolyspora → Actinopolyspora mzabensis	0.63 %
Candidatus Altiarchaeales archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Altiarchaeota → Candidatus Altiarchaeales → unclassified Candidatus Altiarchaeales → Candidatus Altiarchaeales archaeon	0.63 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002558\|JGI25385J37094_10001536	All Organisms → cellular organisms → Archaea	7375	Open in IMG/M
3300002558\|JGI25385J37094_10013662	All Organisms → cellular organisms → Archaea	2909	Open in IMG/M
3300002561\|JGI25384J37096_10041429	All Organisms → cellular organisms → Archaea	1782	Open in IMG/M
3300002562\|JGI25382J37095_10001910	All Organisms → cellular organisms → Archaea	6558	Open in IMG/M
3300002562\|JGI25382J37095_10029273	All Organisms → cellular organisms → Archaea	2158	Open in IMG/M
3300002908\|JGI25382J43887_10022839	All Organisms → cellular organisms → Archaea	3344	Open in IMG/M
3300002908\|JGI25382J43887_10063903	All Organisms → cellular organisms → Archaea	1992	Open in IMG/M
3300002908\|JGI25382J43887_10390799	All Organisms → cellular organisms → Archaea	588	Open in IMG/M
3300002911\|JGI25390J43892_10027653	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1368	Open in IMG/M
3300005166\|Ga0066674_10008713	All Organisms → cellular organisms → Archaea	4129	Open in IMG/M
3300005166\|Ga0066674_10030043	All Organisms → cellular organisms → Archaea	2397	Open in IMG/M
3300005166\|Ga0066674_10034960	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	2236	Open in IMG/M
3300005166\|Ga0066674_10209853	All Organisms → cellular organisms → Archaea	927	Open in IMG/M
3300005166\|Ga0066674_10297559	All Organisms → cellular organisms → Archaea	758	Open in IMG/M
3300005166\|Ga0066674_10328383	All Organisms → cellular organisms → Archaea	718	Open in IMG/M
3300005167\|Ga0066672_10000321	All Organisms → cellular organisms → Archaea	13577	Open in IMG/M
3300005167\|Ga0066672_10012557	All Organisms → cellular organisms → Archaea	4153	Open in IMG/M
3300005167\|Ga0066672_10172606	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1367	Open in IMG/M
3300005171\|Ga0066677_10088818	All Organisms → cellular organisms → Archaea	1618	Open in IMG/M
3300005172\|Ga0066683_10022856	All Organisms → cellular organisms → Archaea	3520	Open in IMG/M
3300005172\|Ga0066683_10100077	All Organisms → cellular organisms → Archaea	1758	Open in IMG/M
3300005172\|Ga0066683_10207820	All Organisms → cellular organisms → Archaea	1209	Open in IMG/M
3300005172\|Ga0066683_10263496	All Organisms → cellular organisms → Archaea	1069	Open in IMG/M
3300005172\|Ga0066683_10617444	All Organisms → cellular organisms → Archaea	655	Open in IMG/M
3300005172\|Ga0066683_10875276	All Organisms → cellular organisms → Archaea	516	Open in IMG/M
3300005174\|Ga0066680_10002294	All Organisms → cellular organisms → Archaea	8359	Open in IMG/M
3300005174\|Ga0066680_10658039	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	649	Open in IMG/M
3300005175\|Ga0066673_10012356	All Organisms → cellular organisms → Archaea	3709	Open in IMG/M
3300005176\|Ga0066679_10258030	All Organisms → cellular organisms → Archaea	1124	Open in IMG/M
3300005177\|Ga0066690_10041581	All Organisms → cellular organisms → Archaea	2756	Open in IMG/M
3300005177\|Ga0066690_10059931	All Organisms → cellular organisms → Archaea	2349	Open in IMG/M
3300005177\|Ga0066690_10896795	All Organisms → cellular organisms → Archaea	566	Open in IMG/M
3300005178\|Ga0066688_10661820	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	668	Open in IMG/M
3300005178\|Ga0066688_10821118	All Organisms → cellular organisms → Archaea	580	Open in IMG/M
3300005179\|Ga0066684_10129066	All Organisms → cellular organisms → Archaea	1583	Open in IMG/M
3300005180\|Ga0066685_10008105	All Organisms → cellular organisms → Archaea	5692	Open in IMG/M
3300005180\|Ga0066685_10009774	All Organisms → cellular organisms → Archaea	5311	Open in IMG/M
3300005180\|Ga0066685_10011099	All Organisms → cellular organisms → Archaea	5054	Open in IMG/M
3300005180\|Ga0066685_10059543	All Organisms → cellular organisms → Archaea → TACK group	2475	Open in IMG/M
3300005180\|Ga0066685_10093320	All Organisms → cellular organisms → Archaea	2001	Open in IMG/M
3300005180\|Ga0066685_10198368	All Organisms → cellular organisms → Archaea	1376	Open in IMG/M
3300005180\|Ga0066685_10427012	All Organisms → cellular organisms → Archaea	920	Open in IMG/M
3300005180\|Ga0066685_10510512	All Organisms → cellular organisms → Archaea	832	Open in IMG/M
3300005181\|Ga0066678_10092922	All Organisms → cellular organisms → Archaea	1812	Open in IMG/M
3300005181\|Ga0066678_10475676	All Organisms → cellular organisms → Archaea	831	Open in IMG/M
3300005181\|Ga0066678_10568902	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	753	Open in IMG/M
3300005186\|Ga0066676_10001532	Not Available	9482	Open in IMG/M
3300005186\|Ga0066676_10149688	All Organisms → cellular organisms → Archaea	1466	Open in IMG/M
3300005186\|Ga0066676_10900166	All Organisms → cellular organisms → Archaea	594	Open in IMG/M
3300005187\|Ga0066675_10094493	All Organisms → cellular organisms → Bacteria	1959	Open in IMG/M
3300005187\|Ga0066675_10155122	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1575	Open in IMG/M
3300005187\|Ga0066675_11193625	All Organisms → cellular organisms → Archaea	565	Open in IMG/M
3300005446\|Ga0066686_10068509	All Organisms → cellular organisms → Archaea	2216	Open in IMG/M
3300005446\|Ga0066686_10082019	All Organisms → cellular organisms → Archaea	2045	Open in IMG/M
3300005450\|Ga0066682_10110083	Not Available	1735	Open in IMG/M
3300005450\|Ga0066682_10115489	All Organisms → Viruses → Predicted Viral	1695	Open in IMG/M
3300005450\|Ga0066682_10310515	All Organisms → cellular organisms → Archaea	1017	Open in IMG/M
3300005450\|Ga0066682_10516519	All Organisms → cellular organisms → Archaea	756	Open in IMG/M
3300005450\|Ga0066682_10635165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Listeriaceae → Listeria → Listeria grandensis	665	Open in IMG/M
3300005451\|Ga0066681_10007008	All Organisms → cellular organisms → Archaea	5313	Open in IMG/M
3300005451\|Ga0066681_10989855	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Listeriaceae → Listeria → Listeria grandensis	502	Open in IMG/M
3300005468\|Ga0070707_100001623	All Organisms → cellular organisms → Bacteria	21808	Open in IMG/M
3300005468\|Ga0070707_100060058	All Organisms → cellular organisms → Archaea	3646	Open in IMG/M
3300005468\|Ga0070707_101660805	All Organisms → cellular organisms → Archaea	606	Open in IMG/M
3300005540\|Ga0066697_10360206	All Organisms → cellular organisms → Archaea	846	Open in IMG/M
3300005553\|Ga0066695_10236333	All Organisms → cellular organisms → Archaea	1152	Open in IMG/M
3300005553\|Ga0066695_10302098	All Organisms → cellular organisms → Archaea	1009	Open in IMG/M
3300005556\|Ga0066707_10038003	All Organisms → cellular organisms → Archaea	2719	Open in IMG/M
3300005557\|Ga0066704_10377803	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	946	Open in IMG/M
3300005557\|Ga0066704_10860546	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	562	Open in IMG/M
3300005558\|Ga0066698_10659258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Listeriaceae → Listeria → Listeria grandensis	697	Open in IMG/M
3300005559\|Ga0066700_10088265	All Organisms → cellular organisms → Archaea	2006	Open in IMG/M
3300005559\|Ga0066700_10489280	All Organisms → cellular organisms → Archaea	860	Open in IMG/M
3300005569\|Ga0066705_10087802	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1827	Open in IMG/M
3300005576\|Ga0066708_10062936	All Organisms → Viruses → Predicted Viral	2112	Open in IMG/M
3300005598\|Ga0066706_10001378	All Organisms → cellular organisms → Bacteria	9472	Open in IMG/M
3300006034\|Ga0066656_10900149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinopolysporales → Actinopolysporaceae → Actinopolyspora → Actinopolyspora mzabensis	567	Open in IMG/M
3300006791\|Ga0066653_10021944	All Organisms → cellular organisms → Archaea	2407	Open in IMG/M
3300006791\|Ga0066653_10132216	Not Available	1188	Open in IMG/M
3300006794\|Ga0066658_10064792	All Organisms → cellular organisms → Archaea	1617	Open in IMG/M
3300006796\|Ga0066665_10959698	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	658	Open in IMG/M
3300006796\|Ga0066665_11196553	All Organisms → cellular organisms → Archaea	580	Open in IMG/M
3300006797\|Ga0066659_10045046	All Organisms → cellular organisms → Archaea	2749	Open in IMG/M
3300006797\|Ga0066659_10051650	All Organisms → cellular organisms → Archaea	2597	Open in IMG/M
3300006797\|Ga0066659_10987604	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	704	Open in IMG/M
3300006800\|Ga0066660_10042538	All Organisms → cellular organisms → Archaea	2903	Open in IMG/M
3300006800\|Ga0066660_10647615	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	877	Open in IMG/M
3300009012\|Ga0066710_100026237	All Organisms → cellular organisms → Archaea	6642	Open in IMG/M
3300009012\|Ga0066710_100747045	All Organisms → cellular organisms → Archaea	1495	Open in IMG/M
3300009012\|Ga0066710_101241728	All Organisms → cellular organisms → Archaea	1155	Open in IMG/M
3300009012\|Ga0066710_103021442	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	654	Open in IMG/M
3300009137\|Ga0066709_100003018	All Organisms → cellular organisms → Archaea	12681	Open in IMG/M
3300009137\|Ga0066709_100080402	All Organisms → cellular organisms → Archaea	3886	Open in IMG/M
3300009137\|Ga0066709_100722035	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1435	Open in IMG/M
3300010303\|Ga0134082_10295497	All Organisms → cellular organisms → Archaea	678	Open in IMG/M
3300010323\|Ga0134086_10366818	All Organisms → cellular organisms → Archaea	572	Open in IMG/M
3300010323\|Ga0134086_10445721	All Organisms → cellular organisms → Archaea	528	Open in IMG/M
3300010325\|Ga0134064_10007933	All Organisms → cellular organisms → Archaea	2774	Open in IMG/M
3300010329\|Ga0134111_10283802	All Organisms → cellular organisms → Archaea	687	Open in IMG/M
3300011271\|Ga0137393_11798059	All Organisms → cellular organisms → Archaea	501	Open in IMG/M
3300012096\|Ga0137389_11081092	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	687	Open in IMG/M
3300012198\|Ga0137364_10002460	All Organisms → cellular organisms → Archaea	9299	Open in IMG/M
3300012201\|Ga0137365_10006039	Not Available	9676	Open in IMG/M
3300012201\|Ga0137365_10652978	All Organisms → cellular organisms → Archaea	770	Open in IMG/M
3300012206\|Ga0137380_10086156	All Organisms → Viruses → Predicted Viral	2872	Open in IMG/M
3300012206\|Ga0137380_10160972	All Organisms → cellular organisms → Archaea	2047	Open in IMG/M
3300012206\|Ga0137380_10325817	All Organisms → cellular organisms → Archaea	1373	Open in IMG/M
3300012207\|Ga0137381_10095000	All Organisms → cellular organisms → Archaea	2521	Open in IMG/M
3300012210\|Ga0137378_10022682	All Organisms → cellular organisms → Archaea	5520	Open in IMG/M
3300012210\|Ga0137378_10731691	All Organisms → cellular organisms → Archaea	901	Open in IMG/M
3300012210\|Ga0137378_11484663	All Organisms → cellular organisms → Archaea	589	Open in IMG/M
3300012211\|Ga0137377_10006440	All Organisms → cellular organisms → Archaea	9496	Open in IMG/M
3300012349\|Ga0137387_10019382	All Organisms → cellular organisms → Bacteria	4208	Open in IMG/M
3300012349\|Ga0137387_11200317	All Organisms → cellular organisms → Archaea	536	Open in IMG/M
3300012351\|Ga0137386_10004874	All Organisms → cellular organisms → Archaea	8899	Open in IMG/M
3300012351\|Ga0137386_10134658	Not Available	1763	Open in IMG/M
3300012351\|Ga0137386_10615267	All Organisms → cellular organisms → Archaea	782	Open in IMG/M
3300012351\|Ga0137386_11259172	All Organisms → cellular organisms → Archaea	515	Open in IMG/M
3300012357\|Ga0137384_11113593	All Organisms → cellular organisms → Archaea	632	Open in IMG/M
3300012359\|Ga0137385_10188890	All Organisms → cellular organisms → Archaea	1802	Open in IMG/M
3300012362\|Ga0137361_11653532	All Organisms → cellular organisms → Archaea	561	Open in IMG/M
3300012363\|Ga0137390_10934368	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	821	Open in IMG/M
3300012925\|Ga0137419_10660219	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	845	Open in IMG/M
3300014154\|Ga0134075_10286324	All Organisms → cellular organisms → Archaea	716	Open in IMG/M
3300015357\|Ga0134072_10129184	All Organisms → cellular organisms → Archaea	809	Open in IMG/M
3300015359\|Ga0134085_10166786	All Organisms → cellular organisms → Archaea	939	Open in IMG/M
3300017657\|Ga0134074_1138718	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Altiarchaeota → Candidatus Altiarchaeales → unclassified Candidatus Altiarchaeales → Candidatus Altiarchaeales archaeon	847	Open in IMG/M
3300018433\|Ga0066667_10824778	All Organisms → cellular organisms → Archaea	791	Open in IMG/M
3300018433\|Ga0066667_11128826	All Organisms → cellular organisms → Archaea	679	Open in IMG/M
3300018482\|Ga0066669_11127003	All Organisms → cellular organisms → Archaea	708	Open in IMG/M
3300021046\|Ga0215015_10182934	All Organisms → cellular organisms → Archaea	609	Open in IMG/M
3300021088\|Ga0210404_10082117	All Organisms → cellular organisms → Archaea	1590	Open in IMG/M
3300025922\|Ga0207646_10025260	All Organisms → cellular organisms → Archaea	5435	Open in IMG/M
3300026295\|Ga0209234_1043013	All Organisms → cellular organisms → Archaea	1717	Open in IMG/M
3300026296\|Ga0209235_1120798	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1099	Open in IMG/M
3300026297\|Ga0209237_1132330	All Organisms → cellular organisms → Archaea	1019	Open in IMG/M
3300026308\|Ga0209265_1166412	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	575	Open in IMG/M
3300026313\|Ga0209761_1007018	All Organisms → cellular organisms → Bacteria	7395	Open in IMG/M
3300026317\|Ga0209154_1001073	All Organisms → cellular organisms → Archaea	16380	Open in IMG/M
3300026317\|Ga0209154_1004826	All Organisms → cellular organisms → Archaea	7073	Open in IMG/M
3300026327\|Ga0209266_1086619	All Organisms → cellular organisms → Archaea	1407	Open in IMG/M
3300026329\|Ga0209375_1102237	All Organisms → cellular organisms → Archaea	1286	Open in IMG/M
3300026329\|Ga0209375_1287109	All Organisms → cellular organisms → Archaea	539	Open in IMG/M
3300026331\|Ga0209267_1137924	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1016	Open in IMG/M
3300026332\|Ga0209803_1041802	All Organisms → cellular organisms → Archaea	2082	Open in IMG/M
3300026528\|Ga0209378_1009345	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	6029	Open in IMG/M
3300026537\|Ga0209157_1011255	All Organisms → cellular organisms → Bacteria	5986	Open in IMG/M
3300026537\|Ga0209157_1088499	All Organisms → cellular organisms → Archaea	1500	Open in IMG/M
3300026538\|Ga0209056_10305848	Not Available	1090	Open in IMG/M
3300026538\|Ga0209056_10325807	All Organisms → cellular organisms → Archaea	1034	Open in IMG/M
3300026538\|Ga0209056_10381948	All Organisms → cellular organisms → Archaea	890	Open in IMG/M
3300026540\|Ga0209376_1046001	All Organisms → cellular organisms → Archaea	2554	Open in IMG/M
3300026540\|Ga0209376_1086009	All Organisms → cellular organisms → Archaea	1655	Open in IMG/M
3300026540\|Ga0209376_1196609	All Organisms → cellular organisms → Archaea	921	Open in IMG/M
3300026547\|Ga0209156_10154852	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1110	Open in IMG/M
3300027671\|Ga0209588_1232977	All Organisms → cellular organisms → Archaea	566	Open in IMG/M
3300027882\|Ga0209590_11011089	All Organisms → cellular organisms → Archaea	518	Open in IMG/M
3300028536\|Ga0137415_10281621	All Organisms → cellular organisms → Archaea	1468	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	96.20%
Loam	Environmental → Terrestrial → Soil → Loam	3.80%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	72.15%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.42%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.53%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.27%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	57.59%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	17.09%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	14.56%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.70%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.53%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.63%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25385J37094_100015362	3300002558	Grasslands Soil	MTKNKTREGPLPTPDRGVNDARPGLPTPTVRKNVTWVQPEPTTSDITRPQQLSPDTTWAEPSTSKSKLAKGSPGLSTSRDQTKE*
JGI25385J37094_100136626	3300002558	Grasslands Soil	MTKNKIREGPLPPPDKGINDARPGLPTPTVRKSVTWVQPEPTTSDVTRSQQLSPDTTWAEPSATKYKLAKGSSGLSTTRDRTKG*
JGI25384J37096_100414292	3300002561	Grasslands Soil	MTKNKIREAPLPPADKGVNDARPGLPTPTVRKNVTWVQPEPTTSDVTRPQQLSPDTTWAEPSTAKSKLAKGSPGLSTTRDQTKE*
JGI25382J37095_100019106	3300002562	Grasslands Soil	MTKNKTREGPLPTPDRGVNDARPGLPTPTVRKNVTWVQPEPTTSDXTRPQQLSPDTTWAEPSTSKSKLAKGSPGLSTSRDQTKE*
JGI25382J37095_100292733	3300002562	Grasslands Soil	MTKNKTREGPLPPTDKGVNDARPGLPTPTVRKNVTWVQPEPTTSDRTRPQQLSPDTTWAEPSIAKSKLAKGSPGLSTTRDQTKE*
JGI25382J43887_100228391	3300002908	Grasslands Soil	MTKNKTREGPLPPPDKGVNDARPGLPTPAVRKNVTWVQPEPTTSDITRPQQLSPDTTWAEPSTAKSKLAKGSPGFS
JGI25382J43887_100639033	3300002908	Grasslands Soil	MTKNKTREGPLPPADKGVNDARPGLPTPTVRRNVTWVQPEPTTSDATRPQQLSPDTTWAEPSVAKSKLAKGSPGLSTNRDQSKEYQAE*
JGI25382J43887_103907992	3300002908	Grasslands Soil	MTKNKTREGPLPPPDKGVNDARPGLPTPTVRKPVTWVQPEPTTADVTRPQQLSPDTTWAEPSVAKSKLARGSPGLSTTRDQTKE*
JGI25390J43892_100276533	3300002911	Grasslands Soil	MTKNKTREGPLPPPDKGVNDARPGLPTPTVRKNVTWVQPEPTTSDITRPQQLSPDTTWAEPSTAKSKLARGSPGLSTTRDQTKE*
Ga0066674_100087132	3300005166	Soil	MTKNKTREGPLPPPDKGVNDARPGLPTPTVRKNVTWVQPEPTTSDITRPQQFSPDTTWAEPSTTKSKLAKGSPGLSTTRDQTKQ*
Ga0066674_100300433	3300005166	Soil	MTKNKTREGPLPPPDKGVNDARPGLPTPTVRKPVTWVQPEPTTSDITRPQQLSPDTTWAEPSTAKSKLAKGSPGLSTTRGQTKEQVPTDGLV*
Ga0066674_100349602	3300005166	Soil	MTKNKTREGPLPPPDKGVNDARPGLPTPTVRKNVTWVQPEPTTSDITRPQQLSPDTTWAEPSTAKSKLAKGSPGLSTTRNQTKE*
Ga0066674_102098531	3300005166	Soil	QELGSEKTTRGERMTKNKTREGPLPPADEGVNDARPGLPTPTVRKPVARVQPEPTASDVTRPQQLSPDTTWAEPGVAKSKLAKGSPGLSTTRDQTKE*
Ga0066674_102975592	3300005166	Soil	MTKNKTREGPLPPADKGTNDARPGLATPTVRKPVAWVQPEPTTSDLTRPQQLSPDTTWAEPSLAKSKLAKGSPGLSTTRDQTKE*
Ga0066674_103283832	3300005166	Soil	MTKNKTREGPLPPPDKGVNDARPGLPTPTVRKNVVWVQPEPTTSDVTRPQQLSPDTTWAEPSTAKSKLAKGSPGLSTTRDKTRE*
Ga0066672_100003216	3300005167	Soil	MTKNKTREGPLPPPDKGVNDARPGLPTPTVRKNVTWVQPEPTTSDITRPQQLSPDTTWTEPGIAKSKLAKGSPGLSTTRDHTKE*
Ga0066672_100125573	3300005167	Soil	MTKNKTREGPVPPPDKGVNDARPGLPAPTVRKSVTWVQPEPTTSDITRPQQLSPDTTWAEPSTAKSKLAKGSPGLSTTRDQTKE*
Ga0066672_101726063	3300005167	Soil	MTKNKIREAPLTPPDQGVNDVRLGLPNPTVRKKVTWVQPEPTTSDVPRPQQLSPDTRWAEPSMAKSKLAKGSPGLSTTRDNAKE*
Ga0066677_100888182	3300005171	Soil	MTKNKTREGQLPPPDKGVNDARPGLPTPTVRKNVTWVQPEPTTSDITRPQQLSPDTTWAEPSTPKSKLAKGSPGLSTTRDQTKE*
Ga0066683_100228564	3300005172	Soil	EKTARGERMTKNKTREGQLPPADKGVNDARPGLPTPTVRKNVTWVQPEPTTSDVTLPQQLSPDATWAEPSVAKSKLARGSPGLSTTRDQTKE*
Ga0066683_101000773	3300005172	Soil	MTKNKTLEGPLPPADKGVNDARPGLPTPTVRKNVTWVQPEPTTSDVTRPQQLSPDTTWAEPSTSKPKLAKGSTGISTTRDRTNE*
Ga0066683_102078202	3300005172	Soil	MTKNKTREGPLPPADKGTNDARPGLPTPTVRKPVTWVQPEPTTSDITRPQQLSPDTTWAEPGTAKSKLAKGSPGLSTTRDQTKE*
Ga0066683_102634962	3300005172	Soil	GERMTKNKTREGPLPPPDKGVNDARPGLPTPTVRKNVTWVQPEPTTSDITRPQQFSPDTTWAEPSTTKSKLAKGSPGLSTTRDQTKQ*
Ga0066683_106174442	3300005172	Soil	MTKNKTREGPLPPADKGVNDARPGLPTPTVRKNVTWVQPEPTTSDITRPQQLSPDTTWAEPSTAKLKLAKESPGLSTTRDQTNE*
Ga0066683_108752761	3300005172	Soil	MTKNKTREGPLPQPDKGVNDARPGLPTPTVRKPVTWVQPEPTTSDITRPQQLSPDTTWAEPSTSKSKLAK
Ga0066680_1000229414	3300005174	Soil	MTKNKTREGPLPPADKGVNDARPGLPTPTVRKNVTWVQPEPTTSDVTRPQQLSPDTTWAEPSVAKSKLAKGSPGLSTTRDQTKE*
Ga0066680_106580391	3300005174	Soil	MTKNKTREGPLPPPDKGVNDARPGLPTPVVRKNVTWVQPEPTTSDITRPQQLSPDMTWAEPSTAKSKLAKGSPGLSTTRDQTKE*
Ga0066673_100123562	3300005175	Soil	MTKNKTREGPLPPPDKGVNDARPGLPTPTVRKNLTWVQPEPTTSDVTRPQQLSPDTTWAEPSTAKSKLAKGSPGLSTTRDQTKE*
Ga0066679_102580301	3300005176	Soil	MTKNKNREGPLPPPDRGVNDARPGLPTPTVRKNVTWVQPEPTTSDITRPQQLSPDTTWAEPSVAKSKLAKGSPGVSTTRDQTKE*
Ga0066690_100415811	3300005177	Soil	MTKNKTREGPLPPPDKGVNDARPGLPTPTVRKSVTWVQPESTTSDITRPQQLSPDTTWAEPSTAKSKLAKGSPGLST
Ga0066690_100599312	3300005177	Soil	MTKNKTQEGPLPSPDKGVNDARPGLPTPTVRKNVTWVQPEPTTSDITRPQQLSPDTTWAEPSTAKSRLAKGSPGPSTTRDQTRR*
Ga0066690_108967952	3300005177	Soil	MTKNKTREGPLPPPDKGVNDARPGLPTPTVRKNVTWVQPEPTTSDITRPQQLSPDTTWAEPSITKSKLARGSPG
Ga0066688_106618202	3300005178	Soil	MTKNKTREGPLPPPDKGANDARPGLPTPTVRKNVTWVQPEPTTSDITRPQQLSPDTTWAEPSTAKSKLAKGSPGLSTTRDQTKE*
Ga0066688_108211181	3300005178	Soil	DKGVNDARPGLPTPTVRKNVTWVQPEPTTSDITRPQQLSPDTTWAEPSTVKSKLARGSPGLSTTRDQTKE*
Ga0066684_101290661	3300005179	Soil	MTKNKTREGPLPPADKGVNDARPGLPTPTVRKPVTWVQPEPTTSDITRPQQFSPDTTWAEPSTTKSKLAKGSPGLSTTRDQTKQ*
Ga0066685_100081051	3300005180	Soil	MTKNKTREGPLPPADKGVNDARPGLPTPTVRKDVTWVQPEPTTSDVTRPQQLSPDTTWAEPSVAKSKLAKGSLGLSTIRDQTKE*
Ga0066685_100097747	3300005180	Soil	MTKNKTREGQLPPADRGVNDARPGLPNPTVRKNVTWVQPEPTTSDITRPQQLSPDTTWAEPSVAKSKLARGSPGLSTTRDKTNE*
Ga0066685_100110994	3300005180	Soil	MTKNKTREGHLPPPDKGANDARPGLPTPTVRKPVAWVQPEPTTSDVTLPQQLSPDTTWAKPRVAKFKLAKGSPGLSTSRDQTRE*
Ga0066685_100595433	3300005180	Soil	MTKNKTREVPLPPPDKGVNDARPGLPTPTVRKPVSWVQLELTAADVTRPQQLSPKATWAETSTAKSKLAKGSPGLSTTRDQTKE*
Ga0066685_100933202	3300005180	Soil	MTKNKTREGPLPPADKGVNDARPGLPTPTVRKPVTWVQPEPTTSDITRPQQLSPDTTWAEPSTVKSKLAKGSPGLSTTRDQTKE*
Ga0066685_101983683	3300005180	Soil	MTKNKTREGPLPPADRGVNDTRPGLPTPIVRKPVSWVQPEPTTSDVTLPQQLSSDTTWAEPSVAKSKLAKGSPGLSTTRNQTKE*
Ga0066685_104270121	3300005180	Soil	MTKNKTREGPLPPADEGVNDARPGLPTPTVRKPVARVQPEPTASDVTRPQQLSPDTTWAEPGVAKSKLAKGSPGLSTTRDQTKE*
Ga0066685_105105121	3300005180	Soil	YPEDRHPEKPERGERMTKNKTREGPLPPPDKGVNDARPGLPTPTVRKNVTWVQPEPTTSDITRPQQLSPDTTWAEPSTAKSKLAKGSPGLSTTRDQTKE*
Ga0066678_100929224	3300005181	Soil	MTKNKTREGPLPPADKGVNDARPGLPTPTVRKNVTWIQPEPTTSDITRPQQLSPDTTWAEPSTAKSKLAKGSPGLSTTRDQTKE*
Ga0066678_104756762	3300005181	Soil	MTKNKTREGPLPPPDKGVNDARPGLPTLTVRKNITWVQPEPTTSDTTRPQQLSPDTTWAEPSTAKSKLAKGSPGL
Ga0066678_105689022	3300005181	Soil	MTKNKTREGQLPSPDKGVNDTRPGLPTPTVRKNVTWVQPEPTTSDTTRPQQLSPDTTWAEPSTAKSKLAKGSPGLSTTRDQTKE*
Ga0066676_100015326	3300005186	Soil	MTKNKTREGPLPPADKGVNDARPGLPTPTVRKPVTWVQPEPTTSDITRPQQLSPDTTWAEPGTAKSKLAKGSPGLSTTRDQTKE*
Ga0066676_101496883	3300005186	Soil	MTKNKTREGPLPPADKGVNDARPGLPTPTVRKNITWVQPDPTTSDVTRPQQLSPDTTWAEPSTAKSKLAKGSPGLSTTRDQTKE*
Ga0066676_109001661	3300005186	Soil	RGERMTKNKTREGPLPPADKGVNDARPGLPTPTVRKDVTWVQPEPTTSDVTRPQQLSPDTTWAEPSVAKSKLAKGSLGLSTIRDQTKE*
Ga0066675_100944933	3300005187	Soil	MTTNMTREGPLPPADKGVNDARPGLPTPTVRRPVTWVQPEPTTSDVTLPQELSPNKTWAEPCTAKSKLAKGSPGLSTSRDQTKE*
Ga0066675_101551222	3300005187	Soil	MTKSKIREGPLPPPDKGVNDTRPGLPTPTVRKSVTWVQPEPTTSDITRPQQLSPDTTWAEPSTAKSKLAKGSPGLSTTRDQTKE*
Ga0066675_111936252	3300005187	Soil	MTKNKTREGPLPPADKGVNDARPGLPTPTVRKPVTWVQPEPTTSDVTRPQQLSPDTTWAEPSVAKSKLAKGSPGLSTTRGQTKE*
Ga0066686_100685096	3300005446	Soil	MTKNKTREGPLPPADRGVNDTRPGLPTPIVRKPVSWVQPEPTTSDVTLPQQLSSDTTWAEPSVAKSKLAKGSPGLSTTRDQTKE*
Ga0066686_100820193	3300005446	Soil	MTKNKTREVPLPPPDKGVNDARPGLPTPTVRKPVSWVQLELTAADVTRPQQLSPEATWAETSTAKSKLAKGSPGLSTTRDQT
Ga0066682_101100832	3300005450	Soil	MTKNKTREGPLPPAYKGINDARPGLPTPTVRKDVTWVQPEPTTSDVTRPQQLSPDTTWAEPSTAKSKLAKGSPGLSNTRNQTEE*
Ga0066682_101154893	3300005450	Soil	MTKNKIREAPLPRADQGANDARPGLPIPTVRKNVTWVQPEPTTSDVTRPQQLSPETTWAEPSVAKSKLAKGSPGLSTTRDQTKE*
Ga0066682_103105153	3300005450	Soil	MTKNKTREGPLPPADKGVNDARPGLPTPTVRKDVTWVQPEPTTSDVTRPQQLSPDTTWAEPSVAKSKLAKGSPGLSTIRDQTKE*
Ga0066682_105165192	3300005450	Soil	CCTQEPGSEKTTRGERMTKNKTREGPLPPADKGTNDARPGLATPTVRKPVAWVQPEPTTSDLTRPQQLSPDTTWAEPSLAKSKLAKGSPGLSTTRDQTKE*
Ga0066682_106351651	3300005450	Soil	MTKNKTREGPLPSADKGVNDARPGLPTPTVRKPVTWVQPEPTTSDITRPQQLSPDTTWAEPGTAKSKLAKGSPRALNHSRPNEGVGQ
Ga0066681_100070085	3300005451	Soil	MTKNKTREGPLPPPDKGVNDARPGLPTPTVRKNLTWVQPEPTTSDVTRPQQLSLDTTWAEPSTAKSKLAKGSPGLSTTRDQTKE*
Ga0066681_109898551	3300005451	Soil	EGPLPQPDKGVNDARPGLPTPTVRKPVTWVQPEPTTSDITRPQQLSPDTTWAEPSTSKSKLAKGSPGLSTTRDQTKE*
Ga0070707_10000162320	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MTKNKTREGPLTQPDQGVNDARPGLPTPTVRKNVTWVQPEPPTLDVTLPQQLSPDKTWAESSIGKPKLAKRSTEEQFRSRV*
Ga0070707_1000600582	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MTKNKIREAPLPRADQGTNDARPGLPTPTVRKNVTWVQPEPTTSDITRPQQLSPDTTWAEPSIAKSKLAKGSPGLSTTRDQTKE*
Ga0070707_1016608052	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MTKNKIREAALPRADQGTNDARPGLPTPTVRKNVTWVQPEPTTSDVTLPQQLSPNTTWAEPSVVKRQPAKGSPRVPTARNETRE*
Ga0066697_103602061	3300005540	Soil	MTKNKTREGPLPPADKGVNDARPGLPTPTVRKDVTWVQPEPTTSDVTRPQQLSPDTTWAEPSVAKSKLAKGS
Ga0066695_102363332	3300005553	Soil	QEPGSEKTTRGERMTKNKTREGPLPPADKGTNDARPGLPTPTVRKPVTWVQPEPTTSDITRPQQLSPDTTWAEPGTAKSKLAKGSPGLSTTRDQTKE*
Ga0066695_103020981	3300005553	Soil	MTKNKTREGPLPPADKGVNDVRPGLPTPTVRKNVTWVQPEPTTSDVTRPQQLSPDTTWAEPSIAKPKLAKGSPGLSTTRDQTKE*
Ga0066707_100380032	3300005556	Soil	MTKNKNREGPLPPADKGVNDTRPGLPTPTVRKNVTWVQPEPTTSDVTRPQQLSPDTTWAEPSTAKSKLAKGSPGLSTTRDQTKE*
Ga0066704_103778033	3300005557	Soil	MTKNKIREGPLPPPDKGINDARPGLPTPTVRKSVTWIQPEPTTSDVTLPQQLSPDATWAKPGIAKPTLAKGSP
Ga0066704_108605462	3300005557	Soil	MTKNKTREGPLPPPDKGINDARPGLPTPTVRKNVTWVQPEPTTSDITRPQQLSPDTTWAEPSTAKSKLAKGSP
Ga0066698_106592581	3300005558	Soil	MTKNKTREGPLPPADEGVNDARPGLPTPTVRKPVARVQPEPTTSDVTRPQQLSPDTTWAEPGVAKSKLAKGSPGLSTTRDQTKE*
Ga0066700_100882651	3300005559	Soil	MTKNKTREGPLPPPDKGVNDARPGLPTPTVRKNVTWVQPEPTTSDITRPQQLSPDTTWAEPSTVKSKLARGSPGLSTTRDQTKE*
Ga0066700_104892802	3300005559	Soil	MTKNKTREGPLPPPDKGVNDARPGLPTPTVRKNVTWVQPEPTTSDITRPQQLSPDTTWAEPSIAKSKVTKGSPGLSTTRDQTKE*
Ga0066705_100878023	3300005569	Soil	MTKNKTREGQLPPPDKGVNDARPGLPTPTVRKNVTWVQPEPTASDITRPQQLSPDTTWAEPSVAKSKLAKGSPGVSTTRDQTKE*
Ga0066708_100629364	3300005576	Soil	EDRHPEKPERGERMTKNKTREGTLPPPDKGVNDARPGLPTPTVRKNVTWVQPEPTTSDVTRPQQLSPDTTWAEPSVAKSKLAKGSPGLSTTRDQTKE*
Ga0066706_100013783	3300005598	Soil	MTKNKTREGPLPPPDKGVNDARPGLPTPTVRKNVIWVQPEPTTSDTTRPQQLSPDTTWAEPSIAKSKLAKGSPGLSTTRDQTKE*
Ga0066656_109001491	3300006034	Soil	QDPRQEKTTRGERMTKNKTREGPLPPADKGVNDARPGLPTPTVRKPVTWVQPEPTTSDVTRPQQLSPDTTWAEPSVAKSKLAKGSPGLSTTRGQTKE*
Ga0066653_100219442	3300006791	Soil	MTKNKTREGPLPPPDKGVNDARPGLPTPTVRKNLTWIQPEPTTSDVTRPQQLSPDTTWAEPSTAKSKLAKGSPGLSTTRDQTKE*
Ga0066653_101322161	3300006791	Soil	EGQLPPADKGVNDARPGLPTPTVRKNVTWVQPEPTTSDVTRPQQLSPDTTWAEPSTAKYKLAKGSPGLSTTRDQTKE*
Ga0066658_100647924	3300006794	Soil	MTKNKTREGPLPPPDKGVNDARPGLPTPTVRKNVTWVQPEPTTSDITRPQQLSPDTTWAEPSNAKSKLAKGSPGLSTPREQAKEEGTK
Ga0066665_109596981	3300006796	Soil	VNDARRGLHTPTAQKRHLGPTRTNNIRHYTTQQLSPGTTWAEPSTAKSKLAKGSPGLSTTRDQTKE*
Ga0066665_111965531	3300006796	Soil	MTKNKTREGPLPPADKGVNDARPGLPTPTVRKDVTWVQPEPTTSDVTRPQQLSPDTTWAEPSVAKSKLAKGSLGLSTVRDQTKE*
Ga0066659_100450463	3300006797	Soil	MTKNKTREGPLPPPDKGVNDARPGLPTPTVRKNVIWAQPEPTTSDVTRPQQLSPDTTWAEPSTAKSKLAKGSPGLSTTRDQTKE*
Ga0066659_100516504	3300006797	Soil	MTKNKTREGPLPPPDKGVNDARPGLPTPTVRKSVTWVQPEPTTSDITRAQQLSPDTTWAEPSTAKSKLAKGSPGLSTTRDQTRV*
Ga0066659_109876043	3300006797	Soil	MTKNKTREGPLPPPDKGVNDARPGLPTPTVRKNVIWVQPELTTSDITRPQQLSPDTTWAEPSIAKSKLAKGSPGLS
Ga0066660_100425384	3300006800	Soil	MTKNKTREGPLPPPDKGVNDARPGLPTPTVRKNVTWVQPEPTTSDITRPQQLSPDTTWAEPSTAKSKLAKGSPGLSTTRDPTNE*
Ga0066660_106476151	3300006800	Soil	MTKNKIQEGPLPPPDKGANDARPGLPTPTVRKNVTWVQPEPTTSDVTRPHQLSPDTTWAEPSVAKSKLARGSPGLSTTRDQTNE*
Ga0066710_1000262374	3300009012	Grasslands Soil	MTKNKIQEGPLPPPDKGANDARPGLPTPTVRKNVTWVQPEPTTSDVTRPHQLSPDTTWAEPSVAKSKLAKGSPGLSTTRDQTNE
Ga0066710_1007470451	3300009012	Grasslands Soil	MTKNKTREGPLPPPDKGVNDARPGLPTPTVRKPVTWVQPEPTTADVTRPQQLSPDTTWAEPSVAKSKLARGSPGLSTTRDQTKE
Ga0066710_1012417281	3300009012	Grasslands Soil	MTKDKTREGPVPKADKGTNDKRPGLPTPSVQKPVTWVQPEPTTSDVTLPQLLSPATAWAELSVAKSKLAKGSPGLSTTRGQTNE
Ga0066710_1030214422	3300009012	Grasslands Soil	MTKNKTREGPLPPPDKGANDARPGLPTPTVRKSVTWVQPEPTTSDITRAQQLSPDTTWAEPSTAKSKLAKGSPGLSTTRDQTRV
Ga0066709_1000030188	3300009137	Grasslands Soil	MTKNKTREGPLPPPDRGVNDARPGLPTPTVRKDVTWVQPEPITSDVTRPQQLSPDTKWAEPSVVKSKPAKGSPGLSTTRDQKEE*
Ga0066709_1000804022	3300009137	Grasslands Soil	MTKNKTREGPLPPPDKGVNDARPGLPTPTVRKDVTWVQPEPTTSDITRPQQLSPDTTWAEPSTAKSKLAKESPGLSTTRDQTNE*
Ga0066709_1007220352	3300009137	Grasslands Soil	PDKGVNDARPGLPTLTVRRNVTWVQPEPMTSNVTRPQQLSPDTTWAEPSVAKSKLAKGSPGLSTTRDRTKE*
Ga0134082_102954971	3300010303	Grasslands Soil	TREGPLPPADKGVNDARPGLPTPTVRRPVTWVQPEPTTSDVTLPQELSPNKTWAEPCTAKSKLAKGSPGLSTTRDQTKE*
Ga0134086_103668181	3300010323	Grasslands Soil	MTKNKTREGQLPPADKGVNDARPGLPTPTVRKNVTWVQPEPTTSDVTLPQQLSPDATWAEPSVAKSKLARGSPGLSTTRDQTKE*
Ga0134086_104457211	3300010323	Grasslands Soil	QGRGCETQEPRSEKTTRGERMTKNKTREGPLPPADKGVNDARPGLPTPTVRKNVTWVQPEPTTSDVTRPQQLRPDTTWAEPSIAKSKLAKGSPGLSTTRDQTKE*
Ga0134064_100079332	3300010325	Grasslands Soil	MKEPSPSKRPSPEDRHWEKRERGERMTKNKTREGPLPPPDKGVNDARPGLPTPTVRKNLTWVQPEPTTSDVTRPQQLSLDTTWAEPSTAKSKLAKGSPGLSTTRDQTKE*
Ga0134111_102838022	3300010329	Grasslands Soil	MTKNKTREGPLPPADKGVNDARPGLPTPTVRKAVTWVQPEPTTSDVTRPQQLSPDTTWAEPSTAKSKLAKGSPGLST
Ga0137393_117980592	3300011271	Vadose Zone Soil	MTKNKTREGPLPPPDKGVNDARPGLPTPTVRKSVTWIQPEPTTSDVTLPQQLSPNTTWAEPSIAKSKLAKGSPGLSTARDLTKE*
Ga0137389_110810921	3300012096	Vadose Zone Soil	MTKNKIREGPLPPPDKGVNDARPGLPTPTVRKNVTWVQPEPTTSDVTRPQQLSPDTTWAEPSVAKSKLAKGSPGLSTTRDQTKE*
Ga0137364_100024603	3300012198	Vadose Zone Soil	MTKNKIREAPLPRADQGTNDARPGLPTPTVRKNVTWVQPEPTTSDVTRPQQLSPATTWAEPSIAKSKLAKGSLGLSTTRYQTRD*
Ga0137365_100060397	3300012201	Vadose Zone Soil	MTKNKTREGPLPPPDKGVNDARLGLPTPTVRKPVAWIQPEPTTSDVTRPQQLSPDTTWAEPSVAKSKLAKGSPGLSTTRDQTKE*
Ga0137365_106529781	3300012201	Vadose Zone Soil	TQAGDFRTQDLRQEKTTGGEGVTKNKTREGPVPPPDKGVNDARPGLPVPTVRKNVTWVQPEPTTSDVTLPQQLSPDTTWAEPCIAKSKLAKGSPGLSTTRDQTRE*
Ga0137380_100861562	3300012206	Vadose Zone Soil	MTKNKTREGPLPPPDKGVNDTRPGLPTPTVRKNVTWVQPEPTTSDITRPQQLSPDTTWAEPSTAKSKLAKGSPGLSTTRDQTKE*
Ga0137380_101609723	3300012206	Vadose Zone Soil	VASWTSPRAECPCCTQELGAEKTTRGERMTKNKTREGPLPPPDKGVNDERPGLPTPTVRKNVAWVQPEPTTSDVTRPQQLSPDTTWAEPSVAKSKLARGSP*
Ga0137380_103258173	3300012206	Vadose Zone Soil	MTKNKTREGPLPPPDKGVNDARPGLPTATVRKPVAWVQPEPTTSDVTLPQQLSPDKTWAEPSIAKSKLAKGSPGLSITRDQTKE*
Ga0137381_100950002	3300012207	Vadose Zone Soil	MTKNKTREGPLPPPDKGVNDARPGLPTPTVRKNVTWIQPEPTTSDITLPQQLSPDTTWAEPSTAKSKLAKGSPGLSTTRDQTKE*
Ga0137378_100226828	3300012210	Vadose Zone Soil	MTKNKIREGPLPPPDKGINDVRPGLPTPIVRKNVTWVQPEPTTSDVTLPRQLSPDTTWAEPSIAKPTLAKGSPGLSTTRDQTKE*
Ga0137378_107316912	3300012210	Vadose Zone Soil	MTRSKLREGPLPQPDKGINDSRLGLPTPTVRKNVTWVQPEPTTSDITRPQQLSPDTTWAEPCVAKSKLAKGSPGLSTIRDQTKD*
Ga0137378_114846631	3300012210	Vadose Zone Soil	HPEKPERGERMTKNKTREGPLPPPDKGVNDARPGLPTPVVRKNVTWVQPEPTTSDITRPQQLSPDMTWAEPSTAKSKLAKGSPGLSTTRDQTKE*
Ga0137377_1000644013	3300012211	Vadose Zone Soil	MTKNKIREAPLPKADKGTNDARPGSPPPTVRKNVTWVQPEPTTSDVTRPQQLSPDTTWAEPIIAKSKLARGSPGLSTTRDQTRE*
Ga0137387_100193822	3300012349	Vadose Zone Soil	VASWTSPRAECPCCTQELGAEKTTRGERMTKNKTREGPLPPPDKGVNDERPGLPTPTVRKNVAWVQPEPTTSDVTRPQQLSPDTTWAEPSVAKSKLAKGSPGLSTTRDQTKE*
Ga0137387_112003171	3300012349	Vadose Zone Soil	GERMTKNKIREGPLPPPDKGVNDARPGLPTPTVRKNVTWVQPEPTTSDVTRPQQLSPDTTWAEPSIAKSTLAKGSPGLSTTRDRTKD*
Ga0137386_100048747	3300012351	Vadose Zone Soil	MTKNKPREGRLPPADKGVNDARPGLPTPTVRKPVTWVQPEPTTSDITRPQQLSPDTTWAEPGTAKSKLAKGSPGLSTTRDQTKE*
Ga0137386_101346583	3300012351	Vadose Zone Soil	MTKNKTREGPLPPPDKGVNDARPGLPTPTVRKNVTWVQPEPTTSDVARLQQLSPDTTWAEPSVAKSKLAKGSPGLSTTRDQTKE*
Ga0137386_106152672	3300012351	Vadose Zone Soil	MTKNKTREGPLPPPDKGVNDARPGLPTPTVRKNVTWVQPEPTTSDITRPQQLSPDTTWAEPSTAKSKLAKGSPGLSTTRDQTKE*
Ga0137386_112591721	3300012351	Vadose Zone Soil	EDRHPEKQERGERMTKNKTREGPLPPPDKGVNDARPGLPTPTVRKNVTWVQPEPTTSDITRPQQLSPDTKWAEPSTAKSKLAKGSPGLSTTRDQSKE*
Ga0137384_111135931	3300012357	Vadose Zone Soil	RDPYPEDRHPEKPERGERMTKNKTREGPLPPPDKGVNDARPGLPTPTVRKNVTWVQPEPTTSDITRPQQLSPDTTWAEPSVAKSKLAKGSPGLSTIRDQSKE*
Ga0137385_101888901	3300012359	Vadose Zone Soil	MTKNKIREGPLPPPDKGVNDARPGLPTPTVRKKVTWVQPEPTTSDVTRPQQLSPDTTWAEPSIAKPRLAKGSPGL
Ga0137361_116535321	3300012362	Vadose Zone Soil	RHQKKPERGERMTKNKTREGPLPPPDKGVNDARPGLPTPTVRKNVTWVQPEPTTADVTRPQQLSPDTTWAEPSNAKSKLAKGSAGLSTTREQAKE*
Ga0137390_109343682	3300012363	Vadose Zone Soil	MTKNKTREGPLPPPDKGVNDARPGLPTPTVRKNVTWVQPEPTTSDVTRPQQLSPDARWAEPSTAKSKLAKGSPGLSTTR
Ga0137419_106602192	3300012925	Vadose Zone Soil	MTKNKTREGPLPPPDKGVNDTRPGLPIPTVRKNVTWVQPEPTTSDITRPQQLSPDTTWAEPSTAKSKLAKGSPGLSTTRDQTKE*
Ga0134075_102863241	3300014154	Grasslands Soil	PDKGVNDARPGLPTPTVRKPVSWVQLELTAADVTRPQQLSPEATWAETSTAKSKLAKGSPGLSTTRDQTKE*
Ga0134072_101291841	3300015357	Grasslands Soil	MTKNKTREGPLPPPDRGVNDARPGLPTPTVRKAVTWVQPEPTTSDVTRPQQLSPDTTWAEPSVAESKLAKGSPGLSTTRDQTKE*
Ga0134085_101667862	3300015359	Grasslands Soil	EEQDPRRTTTPPDKGVNDARPGLPTPTVRKNVTWVQPEPTTSDITRPQQLSPDTTWAEPGTAKSKLAKGSPGLSTTRDQTKE*
Ga0134074_11387182	3300017657	Grasslands Soil	QELGSEKTTRGERMTKNKTREGRLPPADKGVNDARPGLPTPTVRKPVTWVQPEPTTSDITRPQQLSPDTTWAEPSTVKSKLAKGSPGLSTTRDQTKE
Ga0066667_108247781	3300018433	Grasslands Soil	PEDRHPEKPERGERMTKNKTREGQLPPPDKGVNDARPGLPTPTVRKNVTWVQPEPTASDITRPQQLSPDTTWAEPSVAKSKLAKGSPGVSTTRDQTKE
Ga0066667_111288262	3300018433	Grasslands Soil	TREGPLPPPDKGVNDARPGLPTPTVRKNVIWAQPEPTTSDVTRPQQLSPDTTWAEPSTAKSKLAKGSPGLSTTRDRKEE
Ga0066669_111270032	3300018482	Grasslands Soil	GSEKTTRGERMTKNKTREGPLPPAGKGVNDARPGLPNPTVGKPVTWVQPEPTTSDVTRPQQLSPDTTWAEPSVAESKLAKGSPGLSTTRDQTKE
Ga0215015_101829342	3300021046	Soil	MTKNKIREAPLPRADQGTNDARPGLPTPIVRKNVTWVQPEPTSSDITRPQQLSPDTTWAEPSTAKSKLAKGSPGLSTTRDQTRE
Ga0210404_100821171	3300021088	Soil	MTKNKIREGPLPPPDKGVNDVRPGLPTPTVRKNVTWVQPEPTTSDVTLPQQLSPDTTWAIPSIAKPTLARGSPGLSTTRDQTKE
Ga0207646_100252602	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MTKNKTREGPLTQPDQGVNDARPGLPTPTVRKNVTWVQPEPPTLDVTLPQQLSPDKTWAESSIGKPKLAKRSTEEQFRSRV
Ga0209234_10430131	3300026295	Grasslands Soil	MTKNKTREGPLPPPDKGVNDARPGLPTPTVRKNVTWVQPEPTTSDITRPQQLSPDTTWAEPSTAKSKLAKGSPGLSTTRDQTKE
Ga0209235_11207983	3300026296	Grasslands Soil	MTKNKIREGPLPPPDKGINDARPGLPTPTVRKSVTWVQPEPTTSDVTRSQQLSPDTTWAEPSATKYKLAKGSSGLSTTRDRTKG
Ga0209237_11323302	3300026297	Grasslands Soil	MTKNKTREGPLPPADKGVNDARPGLPTPTVRRNVTWVQPEPTTSDATRPQQLSPDTTWAEPSVAKSKLAKGSPGLSTNRDQSKEYQAE
Ga0209265_11664121	3300026308	Soil	MTKNKTREGHLPPPDKGANDARPGLPTPTVRKPVAWVQPEPTTSDVTLPQQLSPDTTWAKPRVAKFKLAK
Ga0209761_10070185	3300026313	Grasslands Soil	MTKNKIREAPLPPADKGVNDARPGLPTPTVRKNVTWVQPEPTTSDVTRPQQLSPDTTWAEPSTAKSKLAKGSPGLSTTRDQTKE
Ga0209154_10010733	3300026317	Soil	MTKNKTREGPLPPPDKGVNDARPGLPTPTVRKNVTWVQPEPTTSDITRPQQLSPDTTWTEPGIAKSKLAKGSPGLSTTRDHTKE
Ga0209154_10048264	3300026317	Soil	MTKNKTQEGPLPSPDKGVNDARPGLPTPTVRKNVTWVQPEPTTSDITRPQQLSPDTTWAEPSTAKSRLAKGSPGPSTTRDQTRR
Ga0209266_10866193	3300026327	Soil	MTKNKTLEGPLPPADKGVNDARPGLPTPTVRKNVTWVQPEPTTSDVTRPQQLSPDTTWAEPSTSKPKLAKGSTGISTTRDRTNE
Ga0209375_11022372	3300026329	Soil	MTKNKTREGPLPPADKGVNDARPGLPTPTVRKDVTWVQPEPTTSDVTRPQQLSPDTTWAEPSVAKSKLAKGSPGLSTIRDQTKE
Ga0209375_12871091	3300026329	Soil	MTKNKTREGPLPPADKGVNDARPGLPTPTVRKAVTWVQPEPTTSDVTRPQQLSPDTTWAEPSTAKSKLAK
Ga0209267_11379241	3300026331	Soil	MTKNKTREGPLPPPDKGANDARPGLPTPTVRKNVTWVQPEPTTSDVTRPQQLSPDTTWAEPSIAKSKL
Ga0209803_10418022	3300026332	Soil	MTKNKTREGPLPPPDKGVNDARPGLPIPTVRKNVTWVQPEPTTSDITRPQQLSPDTTWAEPSIAKSKLAKGSPGLSTTRDQTRE
Ga0209378_10093453	3300026528	Soil	MTKNKNREGPLPPADKGVNDTRPGLPTPTVRKNVTWVQPEPTTSDVTRPQQLSPDTTWAEPSTAKSKLAKGSPGLSTTRDQTKE
Ga0209157_10112552	3300026537	Soil	MTKNKTREGQLPPADRGVNDARPGLPNPTVRKNVTWVQPEPTTSDITRPQQLSPDTTWAEPSVAKSKLARGSPGLSTTRDKTNE
Ga0209157_10884991	3300026537	Soil	MTKNKTREVPLPPPDKGVNDARPGLPTPTVRKPVSWVQLELTAADVTRPQQLSPEATWAETSTAKSKLAKGSPGLSTTRDQTKE
Ga0209056_103058481	3300026538	Soil	RQEKTTRGERMTKNKTREGPLPPADKGVNDARPGLPTPTVRKPVTWVQPEPTTSDVTRPQQLSPDTTWAEPSVAKSKLAKGSPGLSTTRGQTKE
Ga0209056_103258071	3300026538	Soil	MTKNKTREGPLPPPDRGVNDARPGLPTPTVRKDVTWVQPEPITSDVTRPQQLSPDTKWAEPSVVKSKPAKGSPGLSTTRDQKEE
Ga0209056_103819482	3300026538	Soil	MTKNKTREGPLPPPDKGVNDARPGLPTPTVRKPVAWVQPEPTTSDVTLPKQLSPDTTWAEPSVAKSKLAKGSPGLSTTRDQTEE
Ga0209376_10460012	3300026540	Soil	MTKNKTREGPLPPADKGVNDARPGLPTPTVRKDVTWVQPEPTTSDVTRPQQLSPDTTWAEPSVAKSKLAKGSLGLSTIRDQTKE
Ga0209376_10860092	3300026540	Soil	MTKNKTREGPLPPADEGVNDARPGLPTPTVRKPVARVQPEPTTSDVTRPQQLSPDTTWAEPGVAKSKLAKGSPGLSTTRDQTKE
Ga0209376_11966091	3300026540	Soil	MTKNKTREVPLPPPDKGVNDARPGLPTPTVRKPVSWVQLELTAADVTRPQQLSPKATWAETSTAKSKLAKGSPGLSTTRDQTKE
Ga0209156_101548523	3300026547	Soil	MMTKSKIREGPLPPPDKGVNDTRPGLPTPTVRKSVTWVQPEPTTSDITRPQQLSPDTTWAEPSTAKSKLAKGSPGLSTTRDQTKE
Ga0209588_12329771	3300027671	Vadose Zone Soil	YTEDRHQKKQERGERMTKNKTREGPLPPPDKGVNDARPGLPIPTVRKNVTWVQPEPTTSDITRPQQLSPDTTWAEPSTAKSKLAKGSPGLSTTRDQTKE
Ga0209590_110110891	3300027882	Vadose Zone Soil	HQKKPERGERMTKNKTREGPLPPPDKGVNDARPGLPTPTVRKNVTWVQPEPTTSDITRPQQLSPDTTWAEPSTAKSKLAKGSPGLSTTRDQTKE
Ga0137415_102816212	3300028536	Vadose Zone Soil	MTKNKIREAPLPPADKGVNDVRPGLPTPTVRKNVTWVQPEPTTSDITLPRQLSPDTTWAEPSIAKSKLAKGSPGLSTSRDPTKE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F042270

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences