Metagenome Family F042252

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F042252
Family Type	Metagenome
Number of Sequences	158
Average Sequence Length	56 residues
Representative Sequence	MKTTDDRRAQFDAECRTAGLTLGARDDELLYAMWLEWLPERDRLRAAVPAPEDEPWR
Number of Associated Samples	125
Number of Associated Scaffolds	158

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	22.78 %
% of genes near scaffold ends (potentially truncated)	19.62 %
% of genes from short scaffolds (< 2000 bps)	72.78 %
Associated GOLD sequencing projects	111
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.68

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.734 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (18.354 % of family members)
Environment Ontology (ENVO)	Unclassified (30.380 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.468 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 44.71% β-sheet: 0.00% Coil/Unstructured: 55.29%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.68
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.68
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 158 Family Scaffolds
PF01425	Amidase	46.84
PF01315	Ald_Xan_dh_C	26.58
PF02738	MoCoBD_1	15.19
PF00881	Nitroreductase	3.80
PF03950	tRNA-synt_1c_C	1.27
PF01925	TauE	0.63
PF02803	Thiolase_C	0.63
PF05721	PhyH	0.63
PF03992	ABM	0.63
PF02780	Transketolase_C	0.63
PF12732	YtxH	0.63
PF01546	Peptidase_M20	0.63

COG ID	Name	Functional Category	% Frequency in 158 Family Scaffolds
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	46.84
COG0008	Glutamyl- or glutaminyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	1.27
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	0.63
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	0.63
COG5285	Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.63

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.73 %
Unclassified	root	N/A	1.27 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.73 %
Unclassified	root	N/A	1.27 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.73 %
Unclassified	root	N/A	1.27 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	13.29 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.06 %
Unclassified	root	N/A	1.27 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	13.29 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.27 %
Unclassified	root	N/A	1.27 %

Name	Rank	Taxonomy	Distribution
Chloroflexia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	8.86 %
Unclassified	root	N/A	1.27 %
Chloroflexi incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis	0.63 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.63 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.63 %

Name	Rank	Taxonomy	Distribution
Chloroflexales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales	8.86 %
Unclassified	root	N/A	1.27 %
Thermobaculum	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → Thermobaculum	0.63 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.63 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.63 %

Name	Rank	Taxonomy	Distribution
Roseiflexineae	suborder	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae	7.59 %
Unclassified	root	N/A	1.27 %
Chloroflexineae	suborder	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Chloroflexineae	0.63 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.63 %
Thermobaculum	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → Thermobaculum	0.63 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.63 %

Name	Rank	Taxonomy	Distribution
Roseiflexaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae	7.59 %
Unclassified	root	N/A	1.27 %
Chloroflexaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Chloroflexineae → Chloroflexaceae	0.63 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.63 %
Thermobaculum	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → Thermobaculum	0.63 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.63 %

Name	Rank	Taxonomy	Distribution
Roseiflexus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Roseiflexus	7.59 %
Unclassified	root	N/A	1.27 %
Chloroflexaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Chloroflexineae → Chloroflexaceae	0.63 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.63 %
Thermobaculum	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → Thermobaculum	0.63 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.63 %

Name	Rank	Taxonomy	Distribution
unclassified Roseiflexus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Roseiflexus → unclassified Roseiflexus	3.80 %
Unclassified	root	N/A	1.27 %
Chloroflexaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Chloroflexineae → Chloroflexaceae	0.63 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.63 %
Thermobaculum	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → Thermobaculum	0.63 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.63 %

Name	Rank	Taxonomy	Distribution
Roseiflexus sp. RS-1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Roseiflexus → unclassified Roseiflexus → Roseiflexus sp. RS-1	3.16 %
Unclassified	root	N/A	1.27 %
Roseiflexus sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Roseiflexus → unclassified Roseiflexus → Roseiflexus sp.	0.63 %
Chloroflexaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Chloroflexineae → Chloroflexaceae	0.63 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.63 %
Thermobaculum	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → Thermobaculum	0.63 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.63 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_105637336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Roseiflexus	1705	Open in IMG/M
3300002557\|JGI25381J37097_1038346	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300002558\|JGI25385J37094_10005184	All Organisms → cellular organisms → Bacteria	4579	Open in IMG/M
3300002560\|JGI25383J37093_10013283	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Roseiflexus → unclassified Roseiflexus → Roseiflexus sp.	2723	Open in IMG/M
3300002561\|JGI25384J37096_10140717	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300003203\|JGI25406J46586_10034770	All Organisms → cellular organisms → Bacteria	1846	Open in IMG/M
3300003319\|soilL2_10213667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Chloroflexineae → Chloroflexaceae	1150	Open in IMG/M
3300003324\|soilH2_10294568	All Organisms → cellular organisms → Bacteria	1315	Open in IMG/M
3300004156\|Ga0062589_100110961	All Organisms → cellular organisms → Bacteria	1777	Open in IMG/M
3300004156\|Ga0062589_101255482	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300004281\|Ga0066397_10179953	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300004463\|Ga0063356_103616248	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300004633\|Ga0066395_10585228	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300004643\|Ga0062591_101229740	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300005166\|Ga0066674_10028989	All Organisms → cellular organisms → Bacteria	2436	Open in IMG/M
3300005167\|Ga0066672_10190690	All Organisms → cellular organisms → Bacteria	1303	Open in IMG/M
3300005175\|Ga0066673_10031900	All Organisms → cellular organisms → Bacteria	2539	Open in IMG/M
3300005177\|Ga0066690_10650827	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300005180\|Ga0066685_10002264	All Organisms → cellular organisms → Bacteria → Proteobacteria	8905	Open in IMG/M
3300005187\|Ga0066675_10032732	All Organisms → cellular organisms → Bacteria	3066	Open in IMG/M
3300005332\|Ga0066388_100114726	All Organisms → cellular organisms → Bacteria	3199	Open in IMG/M
3300005332\|Ga0066388_100599200	All Organisms → cellular organisms → Bacteria	1725	Open in IMG/M
3300005444\|Ga0070694_101509172	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300005445\|Ga0070708_100157179	All Organisms → cellular organisms → Bacteria	2117	Open in IMG/M
3300005454\|Ga0066687_10181886	All Organisms → cellular organisms → Bacteria	1135	Open in IMG/M
3300005518\|Ga0070699_101007879	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300005529\|Ga0070741_10030158	All Organisms → cellular organisms → Bacteria → Proteobacteria	7634	Open in IMG/M
3300005536\|Ga0070697_100448592	All Organisms → cellular organisms → Bacteria	1123	Open in IMG/M
3300005553\|Ga0066695_10656340	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300005554\|Ga0066661_10070721	All Organisms → cellular organisms → Bacteria	2037	Open in IMG/M
3300005558\|Ga0066698_10018930	All Organisms → cellular organisms → Bacteria	3992	Open in IMG/M
3300005561\|Ga0066699_10045391	All Organisms → cellular organisms → Bacteria	2662	Open in IMG/M
3300005561\|Ga0066699_10305274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	1133	Open in IMG/M
3300005713\|Ga0066905_100243580	All Organisms → cellular organisms → Bacteria	1376	Open in IMG/M
3300005713\|Ga0066905_101242197	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300005764\|Ga0066903_102773515	All Organisms → cellular organisms → Bacteria	950	Open in IMG/M
3300005985\|Ga0081539_10000083	All Organisms → cellular organisms → Bacteria	218881	Open in IMG/M
3300006031\|Ga0066651_10009283	All Organisms → cellular organisms → Bacteria	3934	Open in IMG/M
3300006049\|Ga0075417_10056784	All Organisms → cellular organisms → Bacteria	1705	Open in IMG/M
3300006049\|Ga0075417_10119744	All Organisms → cellular organisms → Bacteria	1207	Open in IMG/M
3300006049\|Ga0075417_10314538	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300006049\|Ga0075417_10411015	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300006794\|Ga0066658_10597890	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300006844\|Ga0075428_100016173	All Organisms → cellular organisms → Bacteria	8248	Open in IMG/M
3300006844\|Ga0075428_100019220	All Organisms → cellular organisms → Bacteria → Proteobacteria	7556	Open in IMG/M
3300006845\|Ga0075421_100019394	All Organisms → cellular organisms → Bacteria	8534	Open in IMG/M
3300006845\|Ga0075421_100192119	All Organisms → cellular organisms → Bacteria	2532	Open in IMG/M
3300006845\|Ga0075421_100338784	All Organisms → cellular organisms → Bacteria	1820	Open in IMG/M
3300006846\|Ga0075430_101024850	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300006847\|Ga0075431_101975018	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300006852\|Ga0075433_10000272	All Organisms → cellular organisms → Bacteria → Proteobacteria	30447	Open in IMG/M
3300006854\|Ga0075425_102186193	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300006854\|Ga0075425_102497425	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300006871\|Ga0075434_101440488	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300006876\|Ga0079217_10209610	All Organisms → cellular organisms → Bacteria	1004	Open in IMG/M
3300006894\|Ga0079215_10125800	All Organisms → cellular organisms → Bacteria	1179	Open in IMG/M
3300006894\|Ga0079215_10975461	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300006894\|Ga0079215_11213748	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300006918\|Ga0079216_10061031	All Organisms → cellular organisms → Bacteria	1679	Open in IMG/M
3300006969\|Ga0075419_10028341	All Organisms → cellular organisms → Bacteria	3469	Open in IMG/M
3300006969\|Ga0075419_10068985	All Organisms → cellular organisms → Bacteria	2238	Open in IMG/M
3300007255\|Ga0099791_10371118	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300007258\|Ga0099793_10014219	All Organisms → cellular organisms → Bacteria	3160	Open in IMG/M
3300009100\|Ga0075418_12869281	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300009147\|Ga0114129_10470002	All Organisms → cellular organisms → Bacteria	1647	Open in IMG/M
3300009156\|Ga0111538_11948980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → Thermobaculum	739	Open in IMG/M
3300010046\|Ga0126384_10014189	All Organisms → cellular organisms → Bacteria	5036	Open in IMG/M
3300010321\|Ga0134067_10142540	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300010326\|Ga0134065_10020134	All Organisms → cellular organisms → Bacteria	1874	Open in IMG/M
3300010337\|Ga0134062_10168497	All Organisms → cellular organisms → Bacteria	983	Open in IMG/M
3300010359\|Ga0126376_11397210	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300010360\|Ga0126372_10634690	All Organisms → cellular organisms → Bacteria	1031	Open in IMG/M
3300010366\|Ga0126379_13040123	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300010391\|Ga0136847_10127473	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300010399\|Ga0134127_11820639	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300011269\|Ga0137392_11524286	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300011271\|Ga0137393_11065212	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300012096\|Ga0137389_10724059	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300012203\|Ga0137399_11004992	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300012203\|Ga0137399_11309523	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300012208\|Ga0137376_10940135	All Organisms → cellular organisms → Bacteria	742	Open in IMG/M
3300012285\|Ga0137370_10181223	All Organisms → cellular organisms → Bacteria	1230	Open in IMG/M
3300012582\|Ga0137358_10622175	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300012685\|Ga0137397_11107343	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300012918\|Ga0137396_10164002	All Organisms → cellular organisms → Bacteria	1623	Open in IMG/M
3300012918\|Ga0137396_10694034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	751	Open in IMG/M
3300012918\|Ga0137396_11187392	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300012918\|Ga0137396_11268130	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300012927\|Ga0137416_12190527	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300012929\|Ga0137404_10010527	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	6393	Open in IMG/M
3300012930\|Ga0137407_10792571	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	895	Open in IMG/M
3300012944\|Ga0137410_10193204	All Organisms → cellular organisms → Bacteria	1573	Open in IMG/M
3300012972\|Ga0134077_10047021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Roseiflexus → unclassified Roseiflexus → Roseiflexus sp. RS-1	1583	Open in IMG/M
3300012977\|Ga0134087_10639344	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300014884\|Ga0180104_1013701	All Organisms → cellular organisms → Bacteria	1927	Open in IMG/M
3300015053\|Ga0137405_1370867	All Organisms → cellular organisms → Bacteria	1799	Open in IMG/M
3300015358\|Ga0134089_10000806	All Organisms → cellular organisms → Bacteria → Proteobacteria	7803	Open in IMG/M
3300015371\|Ga0132258_10080934	All Organisms → cellular organisms → Bacteria → Proteobacteria	7574	Open in IMG/M
3300015372\|Ga0132256_103122602	Not Available	557	Open in IMG/M
3300015374\|Ga0132255_103006836	Not Available	720	Open in IMG/M
3300017656\|Ga0134112_10039146	All Organisms → cellular organisms → Bacteria	1693	Open in IMG/M
3300017659\|Ga0134083_10004998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	4198	Open in IMG/M
3300018431\|Ga0066655_10000140	All Organisms → cellular organisms → Bacteria	21261	Open in IMG/M
3300018433\|Ga0066667_10017900	All Organisms → cellular organisms → Bacteria	3674	Open in IMG/M
3300018433\|Ga0066667_10340440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Roseiflexus → unclassified Roseiflexus → Roseiflexus sp. RS-1	1187	Open in IMG/M
3300018482\|Ga0066669_10624465	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300020170\|Ga0179594_10146056	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300024330\|Ga0137417_1104576	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300025310\|Ga0209172_10506764	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300025324\|Ga0209640_10922456	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300025922\|Ga0207646_11885518	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300026277\|Ga0209350_1007121	All Organisms → cellular organisms → Bacteria	3779	Open in IMG/M
3300026295\|Ga0209234_1032099	All Organisms → cellular organisms → Bacteria	1996	Open in IMG/M
3300026296\|Ga0209235_1065146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1684	Open in IMG/M
3300026297\|Ga0209237_1098183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales	1292	Open in IMG/M
3300026301\|Ga0209238_1262166	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300026308\|Ga0209265_1131355	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300026309\|Ga0209055_1009192	All Organisms → cellular organisms → Bacteria	5327	Open in IMG/M
3300026310\|Ga0209239_1237683	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300026316\|Ga0209155_1001781	All Organisms → cellular organisms → Bacteria	10030	Open in IMG/M
3300026322\|Ga0209687_1164702	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300026326\|Ga0209801_1298767	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300026331\|Ga0209267_1277882	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300026342\|Ga0209057_1004494	All Organisms → cellular organisms → Bacteria	9929	Open in IMG/M
3300026342\|Ga0209057_1011010	All Organisms → cellular organisms → Bacteria	5616	Open in IMG/M
3300026542\|Ga0209805_1035170	All Organisms → cellular organisms → Bacteria	2548	Open in IMG/M
3300026542\|Ga0209805_1374062	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300026550\|Ga0209474_10009443	All Organisms → cellular organisms → Bacteria	7951	Open in IMG/M
3300026550\|Ga0209474_10361147	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300026551\|Ga0209648_10028307	All Organisms → cellular organisms → Bacteria	4894	Open in IMG/M
3300026552\|Ga0209577_10840598	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300027395\|Ga0209996_1016020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Roseiflexus → unclassified Roseiflexus → Roseiflexus sp. RS-1	1027	Open in IMG/M
3300027682\|Ga0209971_1042192	All Organisms → cellular organisms → Bacteria	1098	Open in IMG/M
3300027691\|Ga0209485_1024279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Roseiflexus	1416	Open in IMG/M
3300027873\|Ga0209814_10008934	All Organisms → cellular organisms → Bacteria	3922	Open in IMG/M
3300027873\|Ga0209814_10081619	All Organisms → cellular organisms → Bacteria	1364	Open in IMG/M
3300027873\|Ga0209814_10408418	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300027873\|Ga0209814_10578285	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300027876\|Ga0209974_10134514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Roseiflexus	883	Open in IMG/M
3300027880\|Ga0209481_10043340	All Organisms → cellular organisms → Bacteria	2068	Open in IMG/M
3300027880\|Ga0209481_10122758	All Organisms → cellular organisms → Bacteria	1268	Open in IMG/M
3300027909\|Ga0209382_10065502	All Organisms → cellular organisms → Bacteria	4300	Open in IMG/M
3300027909\|Ga0209382_10098779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Roseiflexus	3423	Open in IMG/M
3300027909\|Ga0209382_10310889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Roseiflexus → unclassified Roseiflexus → Roseiflexus sp. RS-1	1775	Open in IMG/M
3300031548\|Ga0307408_100606576	All Organisms → cellular organisms → Bacteria	973	Open in IMG/M
3300031548\|Ga0307408_101346078	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300031731\|Ga0307405_10401768	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Roseiflexus → unclassified Roseiflexus → Roseiflexus sp. RS-1	1073	Open in IMG/M
3300031731\|Ga0307405_11074687	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Roseiflexus	690	Open in IMG/M
3300031820\|Ga0307473_10135901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1375	Open in IMG/M
3300031820\|Ga0307473_10173817	All Organisms → cellular organisms → Bacteria	1252	Open in IMG/M
3300031911\|Ga0307412_11266607	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300032002\|Ga0307416_101002328	All Organisms → cellular organisms → Bacteria	938	Open in IMG/M
3300032002\|Ga0307416_102975286	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300032180\|Ga0307471_100167626	All Organisms → cellular organisms → Bacteria	2143	Open in IMG/M
3300032180\|Ga0307471_100309751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Roseiflexus	1670	Open in IMG/M
3300032205\|Ga0307472_100373257	All Organisms → cellular organisms → Bacteria	1181	Open in IMG/M
3300033233\|Ga0334722_10018622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	6001	Open in IMG/M
3300033812\|Ga0364926_054418	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	71.52%
Host-Associated	Host-Associated	28.48%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	68.99%
Plants	Host-Associated → Plants	28.48%
Aquatic	Environmental → Aquatic	2.53%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	68.35%
Rhizosphere	Host-Associated → Plants → Rhizosphere	23.42%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.06%
Freshwater	Environmental → Aquatic → Freshwater	1.27%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.63%
Sediment	Environmental → Aquatic → Sediment	0.63%
Floodplain	Environmental → Terrestrial → Floodplain	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	22.78%
Loam	Environmental → Terrestrial → Soil → Loam	9.49%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.80%
Lake	Environmental → Aquatic → Freshwater → Lake	1.27%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.27%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	0.63%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.63%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.63%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.63%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	25.95%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	22.78%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.43%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.16%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.16%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.27%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.27%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.27%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	0.63%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.63%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.63%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	18.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	16.46%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	9.49%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.06%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.43%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	4.43%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.80%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.16%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.16%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.53%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.90%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.27%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.27%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.27%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.27%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.63%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.63%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	0.63%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.63%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.63%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.63%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.63%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.63%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.63%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm	Environmental	Open in IMG/M
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300003203	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014884	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_1Da	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025310	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG (SPAdes)	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027395	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 PM (SPAdes)	Host-Associated	Open in IMG/M
3300027682	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027691	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027876	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental	Open in IMG/M
3300033812	Sediment microbial communities from East River floodplain, Colorado, United States - 65_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1056373362	3300000364	Soil	MKSSDDRRAQFDAECRTAGLALGARDAELLYAMWLEWQPERDRLRAAAPAPEDEPWR*
JGI25381J37097_10383462	3300002557	Grasslands Soil	MXTMDDRRAQFDAECRSAGLTLGARDYDLLYDMWLDWLPERDRLRATMPEPEDEPWR*
JGI25385J37094_100051843	3300002558	Grasslands Soil	MKTMDDRRAQFDAECRSAGLTLGARDYDLLYDMWLDWLPERXRLRATMPEPEDEPWR*
JGI25383J37093_100132832	3300002560	Grasslands Soil	MKTMDDRRAQFDAECRSAGLTLGARDYDLLYDMWLDWLPERDRLRATMPEPEDEPWR*
JGI25384J37096_101407172	3300002561	Grasslands Soil	MKTTDDRSAQFDAECRSAGLTLTARDAELLYAMWLEWLPERDRLRAALPAAEDEPWR*
JGI25406J46586_100347701	3300003203	Tabebuia Heterophylla Rhizosphere	MKSTDDRRAQFDAECRTAGLVLGSRDADLLYAMWLDWLPERDRLRAAVPAPEDE
soilL2_102136672	3300003319	Sugarcane Root And Bulk Soil	MTDDRRAQFEAECRAAGLTLSARDRELLYDMWVDWLPQRDRLRAEIPTPEEEPWR*
soilH2_102945682	3300003324	Sugarcane Root And Bulk Soil	MTDDRRAQFDAECRAAGLTLSARDRELLFDMWVDWLPQRDRLRAEVPAPDEEPWR*
Ga0062589_1001109612	3300004156	Soil	MTDDRRAQFDAECRAAGLTLSARDRELLYEMWVDWLPQRDRLRAEVPALEDEPWR*
Ga0062589_1012554822	3300004156	Soil	MTDDHRAQFDAECRAAGLMLSARDRELLFDMWVDWLPQRDRLRAEVPAPEEEPWR*
Ga0066397_101799531	3300004281	Tropical Forest Soil	STDDRSAQFEAECRTAGLTLSPRDAELLYAMWLEWLPERERLRTAVPAPEDEPWR*
Ga0063356_1036162481	3300004463	Arabidopsis Thaliana Rhizosphere	ARGQEAAMTDDRHTQFDAECRAAGLTLSGRDRELLFDMWVDWLPHRDRLRAEVPAPEEEPWR*
Ga0066395_105852282	3300004633	Tropical Forest Soil	LLLQSRAMKSSDDRRAQFDAECRTAGLTLGARDAELLYAMWLEWQPERDRLRAAAPAPEDEPWR*
Ga0062591_1012297402	3300004643	Soil	MTEDRRAQFEAECRAAGLTLSARDRELLYDMWVDWLPQRDRLRAEVPTPEEEPWR*
Ga0066674_100289892	3300005166	Soil	MKTTDDRRAQFDAECRVAGLSLAARDAELLYAMWLEWLPERDRLRAAVPAAEDEPWR*
Ga0066672_101906902	3300005167	Soil	MKTPDDRRAQFEAECRTAGLTLGARDDELLYAMWLDWLPERDRLRAAVPAPEDEPWR*
Ga0066673_100319002	3300005175	Soil	MKTPNNRRAQFEAECRTAGLALGARDDELLYAMWLDWLPERDRLRTAVPAPEDEPWR*
Ga0066690_106508272	3300005177	Soil	MKTPDNRRAQFEAECRTAGLALGARDDELLYAMWLDWLPERDRLRAAVPAPEDEPWR*
Ga0066685_100022643	3300005180	Soil	MKTTDDRRAQFDAECRVAGLSLAARDAELLYAMWLEWLPERDRLRAAIPAAEDEPWR*
Ga0066675_100327322	3300005187	Soil	MKTPDDRRAQFEAECRTAGLTLGARDDELLYAMWVDWLPERDRLRAAVPAPEDEPWR*
Ga0066388_1001147263	3300005332	Tropical Forest Soil	MKSSDDRRAQFDAECRTAGLTLGARDAELLYAMWLDWQPERDRLRAATPAPEDEPWR*
Ga0066388_1005992002	3300005332	Tropical Forest Soil	MKSNDDRRAQFDAECRTAGLMLGAHDAELLYAMWLEWQPERDRLRAVTPAPEDEPWR*
Ga0070694_1015091722	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MKSSEDRRAQFDAECRTAGLTLGAHDAELLYAMWLEWQPERDRLRAATPAPEDEPWR*
Ga0070708_1001571792	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MKTTDDRRAQFEAECRTAGLTLGARDDELLYAMWLDWLPERDRLRAAVPAPEDEPWRR*
Ga0066687_101818862	3300005454	Soil	KTTDDRRAQFDAECRVAGLSLAARDAELLYAMWLEWLPERERLRAAVPAPEDEPWR*
Ga0070699_1010078792	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MKTTDDRRAQFEAECRTAGLTLGDRDDELLYAMWLDWLPERDRLRAAVPAPEDEPWR*
Ga0070741_100301587	3300005529	Surface Soil	MADERRTQFDAEVRAAALTLSERDADLLYEMWLEWLPQRDRLRATVPALEDEPWR*
Ga0070697_1004485922	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MKSSDDRRAQFDAECRTAGLTLGPRDTDLLYAMWLEWQPERDRLRAAASAPEDEPWR*
Ga0066695_106563402	3300005553	Soil	MTSQDARAQFDAECRAAGLTLTGRDADAMYEMWLEWLPERDRLRAAVPELEDEPWR*
Ga0066661_100707213	3300005554	Soil	METTDDRRAQFEAECRTAGLTLGARDDELLYAMWLDWLPERDRLRAAVPSPEDEPWR*
Ga0066698_100189303	3300005558	Soil	MKTTDDRRAQFDAECRVAGLSLAARDAELLYAMWLEWLPERDRLRAA
Ga0066699_100453912	3300005561	Soil	METTDDRRAQFEAECRTAGLTLGARDDELLYAMWLDWLPERDRLRAAVPAPEDEPWR*
Ga0066699_103052742	3300005561	Soil	MKTPDDRRAQFEAECRTAGLALGARDDELLYAMWLDWLPERDRLRAAVPAPEDEPWR*
Ga0066905_1002435802	3300005713	Tropical Forest Soil	MKSSDDRRAQFDAECRTAGLTLGARDAELLYAMWLEWQPERDRLRAAAPAPEDEPWR*
Ga0066905_1012421972	3300005713	Tropical Forest Soil	MKSTDDRSAQFEAECRTAGLTLSPRDAELLYAMWLEWLPERERLRTAVPAPEDEPWR*
Ga0066903_1027735152	3300005764	Tropical Forest Soil	MKSSDDRRAQFDAECRTAGLTLGARDAELLYAMWLEWQPERDRLRAAAPAPEEEPWR*
Ga0081539_1000008320	3300005985	Tabebuia Heterophylla Rhizosphere	MKSTDDRRAQFDAECRTAGLVLGSRDADLLYAMWLDWLPERDRLRAAVPAPEDEPWR*
Ga0066651_100092833	3300006031	Soil	MKTPDNRRAQFEAECRTAGLALGARDDELLYAMWLDWLPERDRLRTAVPAPEDEPWR*
Ga0075417_100567841	3300006049	Populus Rhizosphere	LVQSRAMKSSDDRRAQFDAECRTAGLTLGVRDAELLYAMWLDWQPERDRLRAAAPAPEDEPWR*
Ga0075417_101197442	3300006049	Populus Rhizosphere	MTDDRRAQFDAECHAAGLTLSARDRELLYDMWVDWLPQRERLRAEIPTPEEEPWR*
Ga0075417_103145382	3300006049	Populus Rhizosphere	MTTQDERRSEFDAACRIAGLTLSARDAELLYAMWLDWLPQRDRLRGAVPAPEDEPWR*
Ga0075417_104110152	3300006049	Populus Rhizosphere	MKTTDDRRAQFDAECRVAGLSLTARDAELLYAMWLEWLPERDRLRAAVPAAEDEPWR*
Ga0066658_105978901	3300006794	Soil	METTDDRRAQFEAECRTAGLTLGARDEELLYAMWLDWLPERDRLRAAVPSPED
Ga0075428_1000161739	3300006844	Populus Rhizosphere	MADQQRAQFDAEVRAAGLTLGDRDLELLYEMWLDWLPQRDRLRAEVPALEDEPWR*
Ga0075428_1000192206	3300006844	Populus Rhizosphere	MKSSDDRRAQFDAECRTAGLTLGVRDAELLYAMWLDWQPERDRLRAAAPAPEDEPWR*
Ga0075421_10001939410	3300006845	Populus Rhizosphere	MTDDRHTQFDAECRAAGLTLSGRDRELLFDMWVDWLPHRDRLRAEVPAPEEEPWR*
Ga0075421_1001921192	3300006845	Populus Rhizosphere	MTDDRRAQFDAECRAAGLTLSARDHELLYEMWVDWLPQRDRLRAEVPAPEEEPWR*
Ga0075421_1003387842	3300006845	Populus Rhizosphere	MKSSDDRRAQFDAECRTAGLTLGARDAELLYAMWLEWQPERDRLRAAAPVPEDEPWR*
Ga0075430_1010248502	3300006846	Populus Rhizosphere	AQFDAKCRTAGLTLSVRDAELLYAMWLDWQPERDRLRAAAPAPEDEPWR*
Ga0075431_1019750181	3300006847	Populus Rhizosphere	AQFDAECRTAGLMLGARDAELLYAMWLEWQPERDRLRAAAPAPEDEPWR*
Ga0075433_1000027221	3300006852	Populus Rhizosphere	MKSSDNRRAQFDAECRTAGLTLGARDAELLYAMWLEWQPERDRLRAAAPVPEDEPWR*
Ga0075425_1021861931	3300006854	Populus Rhizosphere	RRAQFDAECRTAGLTLGARDAELLYAMWLEWQPERDRLRAAAPAPEDEPWR*
Ga0075425_1024974251	3300006854	Populus Rhizosphere	MKSTDDRREEFDAEVRVAGLVLGPRDHDLLYDMWLDWLPQRDRLRASVPAPEDEPWR*
Ga0075434_1014404882	3300006871	Populus Rhizosphere	MKSSDDQRAQFDAECRTVGLTLGARDAELLYAMWLEWQPERDRLRAAAPAPEDEPWR*
Ga0079217_102096102	3300006876	Agricultural Soil	MTDDRHTQFDAECRAAGLTLSARDRELLFDMWVDWLPQRDCLRAEVPAPEEEPWR*
Ga0079215_101258002	3300006894	Agricultural Soil	MTDDRRAQFEAECRAAGLALSARDRELLFDMWVDWLPQRERLRAEIPAPEEEPWR*
Ga0079215_109754612	3300006894	Agricultural Soil	MTDDRRAQFDAECRAAGLTLSARDHELLYEMWVDWLPYRDQLRAEAPTLEEEPWR*
Ga0079215_112137482	3300006894	Agricultural Soil	MTDDRHTQFDAECRAAGLALSARDRELLFDMWVDWLPHRDRLRAEVPAPEEEPWR*
Ga0079216_100610312	3300006918	Agricultural Soil	MTDDRHTQFDAECRAAGLTLSARDRELLFDMWVDWLPQRDRLRAEVPAPEEEPWR*
Ga0075419_100283412	3300006969	Populus Rhizosphere	LVQSRAMKSSDDRRAQFDAKCRTAGLTLSVRDAELLYAMWLDWQPERDRLRAAAPAPEDEPWR*
Ga0075419_100689852	3300006969	Populus Rhizosphere	MTDDRHTQFEAECRAAGLTLSGRDRELLFDMWVDWLPHRDRLRAEVPAPEEEPWR*
Ga0099791_103711181	3300007255	Vadose Zone Soil	MKTTNDRRAQFDAECRSAGLTLGARDYDLLYDMWLDWLPERDRLRATMPEPEDEPWR*
Ga0099793_100142192	3300007258	Vadose Zone Soil	MKTPDDRRAQFEAECRTAGLTLGARDDELLYAMWLDWLPERDRLRAAVPAPEDEPWRCASPISTCAA*
Ga0075418_128692812	3300009100	Populus Rhizosphere	MKSSDDRRAQFDAECRTAGLMLGARDAELLYAMWLEWQPERDRLRAAAPAPEDEPWR*
Ga0114129_104700021	3300009147	Populus Rhizosphere	DAECRAAGLTLSARDHELLYEMWVDWLPQRDRLRAEVPAPEEEPWR*
Ga0111538_119489802	3300009156	Populus Rhizosphere	MKSSDNRRAQFDAECRTAGLTLGARDAELLYAMWLEWQPERDRLRAAAPAPEDEPWR*
Ga0126384_100141895	3300010046	Tropical Forest Soil	MKSTDDRNAQFEAECRTAGLTLGARDAELLYAMWLEWLPERERLRTAAPAPEDEPWR*
Ga0134067_101425402	3300010321	Grasslands Soil	MKTTDDRRAQFDAECRVAGLSLAARDAELLYAMWLEWLPERDRLRAAVLAAEDEPWR*
Ga0134065_100201342	3300010326	Grasslands Soil	MKTTDDRRAQFDAECRVAGLSLAARDAELLYAMWLEWLPERDRLRAAVPAAEDEQWR*
Ga0134062_101684971	3300010337	Grasslands Soil	MTSQDARAQFDAECRAAGLTLTGRDADAMYEMWLEWLPERDCLRAAVPELEDEPWR*
Ga0126376_113972101	3300010359	Tropical Forest Soil	LQSRAMKSSDDRRAQFDAECRTAGLTLGARDAELLYAMWLEWQPERDRLRATAPAPEDEPWR*
Ga0126372_106346901	3300010360	Tropical Forest Soil	QSRAMKSSDDRRAQFDAECRTAGLTLGARDAELLYAMWLDWQPERDRLRAATPAPEDEPWR*
Ga0126379_130401232	3300010366	Tropical Forest Soil	MKSSDDRRAQFDAECRTAGLTLGARDAELLYAMWLEWQPERDRLRAAAP
Ga0136847_101274732	3300010391	Freshwater Sediment	MKSEDRHAQFDAECRAAGLTLSGRDYDLLYDMWLDWRPERDRLRAAVPEPEDEPWR*
Ga0134127_118206391	3300010399	Terrestrial Soil	MRADRRLAMTDDRRAQFDAECRAAGLTLSARDHELLYEMWVDWLPQRDRLRAEVPAPEEEPWR*
Ga0137392_115242862	3300011269	Vadose Zone Soil	MKTPDDRRAQFETECRTAGLTLGARDDDLLYAMWLDWLPERDRLRAAVPAPEDEPWR*
Ga0137393_110652121	3300011271	Vadose Zone Soil	QFEAECRTAGLTLGARDDELLYAMWLDWLPERDRLRAAVPAPEDEPWR*
Ga0137389_107240591	3300012096	Vadose Zone Soil	MKTPDDRRAQFETECRTAGLTLGARDDELLYAMWLDWLPERDRLRAAVPAPEDERWR*
Ga0137399_110049922	3300012203	Vadose Zone Soil	MKTTDDRRAQFDAECRSAGLILGARDHDLLYDMWLDWLPERDRLRAAVPEPEDEPWR*
Ga0137399_113095232	3300012203	Vadose Zone Soil	LLQSRAMKTPDDRRAQFEAECRTAGLTLGARDDDLLHAMWLDWLPERDRLRAAVPAPEDEPWR*
Ga0137376_109401351	3300012208	Vadose Zone Soil	DRRAQFEAECRTAGLTLGARDDELLYAMWLDWLPERDRLRAAVPAPEDEPWR*
Ga0137370_101812232	3300012285	Vadose Zone Soil	MKSNDEPRVQFEAECRTAGLVLGARDAELLYATWLEWLPERERLRAAVPAPEDEPWR*
Ga0137358_106221752	3300012582	Vadose Zone Soil	MKTPDDRRAQFEAECRTAGLTLGARDDELLFAMWLDWLPERDRLRAAVPAPEDEPWR*
Ga0137397_111073432	3300012685	Vadose Zone Soil	MKTTDDRRAQFDAECRTAGLTLGARDDALLYDMWLEWLPERDRLRAAVPAPEDEPWR*
Ga0137396_101640022	3300012918	Vadose Zone Soil	MKTTDDRRAQFDAECRSAGLTLGARDGDLLYDMWLDWLPERDRLRAAVPEPEDEPWR*
Ga0137396_106940342	3300012918	Vadose Zone Soil	MKTTDDRRAQFEAECRSASLTLGARDDELLYDMWLDWLPERDRLRAAVPAPEDEPWR*
Ga0137396_111873922	3300012918	Vadose Zone Soil	MKTTDDRRAQFDAECRSAGLILGARDHDLLYDMWLDWLPERDRLRATVPEPEDEPWR*
Ga0137396_112681302	3300012918	Vadose Zone Soil	MKTTDDRRAQFEAECRTAGLTLGARDDELLYAMWLDWLPERDRLRAAVPAPEDEPWR*
Ga0137416_121905272	3300012927	Vadose Zone Soil	QSRAMKTPDDRRAQFEAECRTAGLTLGARDDELLYAMWLDWLPERDRLRAAVPAPEDEPWR*
Ga0137404_100105272	3300012929	Vadose Zone Soil	MKTTNDRRAQFDAECRSAGLTLGARDGDLLYDMWLDWLPERDRLRATVPEPEDEPWR*
Ga0137407_107925712	3300012930	Vadose Zone Soil	METTDDRRAQFAAECRTAGLTLGARDEELLYAMWLDWLPERDRLRAAVPSPEDEPWR*
Ga0137410_101932041	3300012944	Vadose Zone Soil	RRAQFDAECRTAGLTLGARDDALLYDMWLEWLPERDRLRAAVPAPEDEPWR*
Ga0134077_100470212	3300012972	Grasslands Soil	MKTTDDRSAQFDAECRSAGLTLTARDAELLDAMWLEWLPERDRLRAALPAAEDEPWR*
Ga0134087_106393442	3300012977	Grasslands Soil	MKTMDDRRAQFDAECRVAGLSLAARDAELLYAMWLEWLPERDRLRAAVPAAEDEPWR*
Ga0180104_10137012	3300014884	Soil	MRADRRFAMTDDRRAQFDAECRAAGLTLSARDHELLYEMWMDWLPNRDRLRAEVPTLEEEPWR*
Ga0137405_13708671	3300015053	Vadose Zone Soil	MKTMDDRRAQFDAECRSAGLTLGARDGDLLYDMWLDWLPERDRLRATVPEPEDEPWR*
Ga0134089_100008063	3300015358	Grasslands Soil	MKTMDDRRAQFDAECRSAGLALGARDYDLLYDMWLDWLPERDRLRATMPEPEDEPWR*
Ga0132258_100809347	3300015371	Arabidopsis Rhizosphere	MKSDADRRAQFDHECRVAELELTMRDADLLYAMWLAWLPERDRLRAAVPAPEEEPWR*
Ga0132256_1031226022	3300015372	Arabidopsis Rhizosphere	MNPEDARAQFDAECRAAGMALTGRDAELMFEMWLDWLPERDRLRAAEPEP
Ga0132255_1030068361	3300015374	Arabidopsis Rhizosphere	MNPEDARAQFDAECRAAGMALTGRDAELMFEMWLDWLPERDRLRAAEPEPEDEP
Ga0134112_100391461	3300017656	Grasslands Soil	MKTTDDRSAQFDAECRSAGLTLTARDAELLYAMWLEWLPERDRLRAALPAAE
Ga0134083_100049984	3300017659	Grasslands Soil	MKTTDDRSAQFDAECRSAGLTLTARDAELLYAMWLEWLPERDRLRAALPAAEDEPWR
Ga0066655_100001409	3300018431	Grasslands Soil	MKTMDDRRAQFDAECRSAGLTLGARDYDLLYDMWLDWLPERDRLRATMPEPEDEPWR
Ga0066667_100179002	3300018433	Grasslands Soil	MKTTDDRRAQFDAECRVAGLSLAARDAELLYAMWLEWLPERDRLRAAVPAAEDEPWR
Ga0066667_103404402	3300018433	Grasslands Soil	MKTPDDRRAQFEAECRTAGLTLGARDDELLYAMWLDWLPERDRLRAAVPAPEDEPWR
Ga0066669_106244652	3300018482	Grasslands Soil	MKTPDDRRAQFEAECRTAGLALGARDDELLYAMWLDWLPERDRLRTAVPAPEDEPWR
Ga0179594_101460562	3300020170	Vadose Zone Soil	MKTTDDRSAQFDAECRSAGVTLTARDAELLYAMWLEWLPERDRLRAALPAAEDEPWR
Ga0137417_11045762	3300024330	Vadose Zone Soil	MKTTDDRRAQFDAECRSAGLTLGARDGDLLYDMWLDWLPERDRLRAAVPEPEDEPWR
Ga0209172_105067641	3300025310	Hot Spring Sediment	MTDDRRAQFDAEVRAAGLTLRGRDGELLYEMWLDWLPQRDRLRAEVPAPEDEPWR
Ga0209640_109224562	3300025324	Soil	MTEDRRAQFDAEVRASGLTLRGRDHELLYEMWLDWLPQRDRLRAEVPGLEEEPWR
Ga0207646_118855182	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MKSSDDRRAQFDAECRTAGLTLGPRDTDLLYAMWLEWQPERDRLRAAAPAPEDEPWR
Ga0209350_10071215	3300026277	Grasslands Soil	MKTMDDRRAQFDAECRSAGLTLGARDYDLLYDMWLDWLPERDRLRAAVPAPEDEPWR
Ga0209234_10320992	3300026295	Grasslands Soil	MKTPDNRRAQFEAECRTAGLALGARDDELLYAMWLDWLPERDRLRAAVPAPEDEPWR
Ga0209235_10651463	3300026296	Grasslands Soil	QFDAECRSAGLTLGARDYDLLYDMWLDWLPERDRLRATMPEPEDEPWR
Ga0209237_10981832	3300026297	Grasslands Soil	MKTTDDRRAQFDAECRTAGLTLGARDDELLYAMWLEWLPERDRLRAAVPAPEDEPWR
Ga0209238_12621661	3300026301	Grasslands Soil	LLQSRAMKTPDDRRAQFEAECRTAGLALGARDDELLYAMWLDWLPERDRLRAAVPAPEDEPWR
Ga0209265_11313551	3300026308	Soil	MKTPDDRRAQFEAECRTAGLTLGARDDELLYAMWLDWLPERDRLRAAVP
Ga0209055_10091923	3300026309	Soil	METTDDRRAQFEAECRTAGLTLGARDDELLYAMWLDWLPERDRLRAAVPSPEDEPWR
Ga0209239_12376832	3300026310	Grasslands Soil	MKTPDDRRAQFEAECRTAGLALGARDDELLYAMWLDWLPERDRLRATMPEPEDEPWR
Ga0209155_10017818	3300026316	Soil	MKTPNNRRAQFEAECRTAGLALGARDDELLYAMWLDWLPERDRLRAAVPAPEDEPWR
Ga0209687_11647022	3300026322	Soil	MKTPDNRRAQFEAECRTAGLTLGARDDELLYAMWLDWLPERDRLRAAVPAPEDEPWR
Ga0209801_12987672	3300026326	Soil	MKTPDDRRAQFEAECRTAGLTLGARDDELLYAMWLDWLPERDRLRATMPEPEDEPWR
Ga0209267_12778822	3300026331	Soil	MKTPDDRRAQFEAECRTAGLTLGARDDELLYAMWLDWLPERDRLRAAVPSPEDEPWR
Ga0209057_10044946	3300026342	Soil	MKTPDDRRAQFEAECRTAGLTLGARDDELLYAMWVDWLPERDRLRAAVPAPEDEPWR
Ga0209057_10110102	3300026342	Soil	MKTTDDRRAQFDAECRVAGLSLAARDAELLYAMWLEWLPERDRLRAAIPAAEDEPWR
Ga0209805_10351702	3300026542	Soil	MKTPDKRRAQFEAECRTAGLALGARDDELLYAMWLDWLPERDRLRAAVPAPEDEPWR
Ga0209805_13740622	3300026542	Soil	RAQFEAECRTAGLTLGARDDELLYAMWLDWLPERDRLRAAVPAPEDEPWR
Ga0209474_100094434	3300026550	Soil	MKTTDDRRAQFDAECRVAGLSLAARDAELLYAMWLEWLPERDRLRAAVLAAEDEPWR
Ga0209474_103611471	3300026550	Soil	MKTPDNRRAQFEAECRTAGLALGARDDELLYAMWLDWLPERDRLRTA
Ga0209648_100283074	3300026551	Grasslands Soil	MKTTDDRRAQFEAECRTAGLTLGARDDDLLYAMWLDWLPERDRLRAAVPAPEDEPWR
Ga0209577_108405982	3300026552	Soil	RAMKTTDDRRAQFDAECRVAGLSLAARDAELLYAMWLEWLPERDRLRAAVPAAEDEPWR
Ga0209996_10160202	3300027395	Arabidopsis Thaliana Rhizosphere	MTDDHRAQFDAECRAAGLMLSARDRELLFDMWVDWLPQRDRLRAEVPAPEEEPWR
Ga0209971_10421922	3300027682	Arabidopsis Thaliana Rhizosphere	MTDDHHAQFDAECRAAGLTLSARDRELLFDMWVEWLPQRDRLRAEVPAPEEEPWR
Ga0209485_10242792	3300027691	Agricultural Soil	MTDDRHTQFDAECRAAGLTLSARDRELLFDMWVDWLPQRDRLRAEVPAPEEEPWR
Ga0209814_100089347	3300027873	Populus Rhizosphere	MKSTDDRRAQFDAECRTAGLVLGSRDADLLYAMWLDWLPERDRLRAAVPAPEDEPWR
Ga0209814_100816192	3300027873	Populus Rhizosphere	MKSSDDRRAQFDAECRTAGLTLGVRDAELLYAMWLDWQPERDRLRAAAPAPEDEPWR
Ga0209814_104084182	3300027873	Populus Rhizosphere	MKTTDDRRAQFDAECRVAGLSLTARDAELLYAMWLEWLPERDRLRAAVPAAEDEPWR
Ga0209814_105782852	3300027873	Populus Rhizosphere	MTTQDERRSEFDAACRIAGLTLSARDAELLYAMWLDWLPQRDRLRGAVPAPEDEPWR
Ga0209974_101345142	3300027876	Arabidopsis Thaliana Rhizosphere	MTDDHHAQFDAECRAAGLTLSARDRELLFDMWMDWLPQRDRLRAEVPAPEEEPWR
Ga0209481_100433402	3300027880	Populus Rhizosphere	MKSSDDRRAQFDAKCRTAGLTLSVRDAELLYAMWLDWQPERDRLRAAAPAPEDEPWR
Ga0209481_101227582	3300027880	Populus Rhizosphere	MTDDRHTQFEAECRAAGLTLSGRDRELLFDMWVDWLPHRDRLRAEVPAPEEEPWR
Ga0209382_100655024	3300027909	Populus Rhizosphere	MADQQRAQFDAEVRAAGLTLGDRDLELLYEMWLDWLPQRDRLRAEVPALEDEPWR
Ga0209382_100987792	3300027909	Populus Rhizosphere	MTDDRHTQFDAECRAAGLTLSGRDRELLFDMWVDWLPHRDRLRAEVPAPEEEPWR
Ga0209382_103108892	3300027909	Populus Rhizosphere	MTDDRRAQFDAECRAAGLTLSARDHELLYEMWVDWLPQRDRLRAEVPAPEEEPWR
Ga0307408_1006065762	3300031548	Rhizosphere	MTDDRRAQFDAECRAAGLTLSARDRELLFDMWVDWLPQRDRLRAEIPAPEEEPWR
Ga0307408_1013460782	3300031548	Rhizosphere	DDRRAQFDAECRAAGLTLSARDRELLFDMWVDWLPQRDRLRAEVPAPEEEPWR
Ga0307405_104017682	3300031731	Rhizosphere	MTDDRRAQFDAECRAAGLTLSARDRELLFDMWVDWLPQRDRLRAEVPAPEEEPWR
Ga0307405_110746872	3300031731	Rhizosphere	MADEARAQFDAEVRAAGLTLSARDYDLLYEMWVDWLPQRDRLRAEVPALGEEPWR
Ga0307473_101359012	3300031820	Hardwood Forest Soil	MKTTDDRRAQFEAECRTAGLTLGARDDELLYAMWLEWLPERDRLRAAVPAPEDEPWR
Ga0307473_101738172	3300031820	Hardwood Forest Soil	MKSSEDRRAQFDAECRTAGLTLGAHDAELLYAMWLEWQPERDRLRAAAPAPEDEPWR
Ga0307412_112666071	3300031911	Rhizosphere	MTDDRRAQFDAECRAAGLTLSARDRELLFDMWVDWLPQRDRLRAEVPALDEEPWR
Ga0307416_1010023282	3300032002	Rhizosphere	MNDDRRAQFDAECRAAGLTLSARDRELLYEMWVDWLPQRDRLRAEAPALEDEPWR
Ga0307416_1029752862	3300032002	Rhizosphere	MADEARAQFDAEVRAAGLTLSARDHDLLYEMWVDWLPQRDRLRAEVPALEEEPWR
Ga0307471_1001676262	3300032180	Hardwood Forest Soil	MKTTDDRRAQFEAECRTAGLTLGARDDELLYAMWLDWLPERDRLRAAVPAPEDEPWR
Ga0307471_1003097512	3300032180	Hardwood Forest Soil	MKSSEDRRAQFDAECRTAGLTLGAHDAELLYAMWLEWQPERDRLRAATLAPEDEPWR
Ga0307472_1003732571	3300032205	Hardwood Forest Soil	MKTTDDRRAQFEAECRTAGLTLGDRDDELLYAMWLDWLPERDRLRAA
Ga0334722_100186226	3300033233	Sediment	MTEDRVQFDAECRAAGLRLSAADHEALYQMWLEWLPERQRLRDAIPQPEEEPWR
Ga0364926_054418_554_724	3300033812	Sediment	MKSDDRRAQFDAECRAAGLALDGRDRDLLYAMWLDWLPERDRLRAALPGPEDEPWR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F042252

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences