Metagenome / Metatranscriptome Family F042247

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F042247
Family Type	Metagenome / Metatranscriptome
Number of Sequences	158
Average Sequence Length	47 residues
Representative Sequence	MTDDPLDAMKARWSYIQGFLFPWMREDNDPITEALGRLVTTLDVIG
Number of Associated Samples	96
Number of Associated Scaffolds	158

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	10.76 %
% of genes near scaffold ends (potentially truncated)	95.57 %
% of genes from short scaffolds (< 2000 bps)	87.34 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (54.430 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil (21.519 % of family members)
Environment Ontology (ENVO)	Unclassified (44.304 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (70.886 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.65% β-sheet: 0.00% Coil/Unstructured: 51.35%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 158 Family Scaffolds
PF04972	BON	1.90
PF14690	zf-ISL3	1.90
PF13586	DDE_Tnp_1_2	1.27
PF01609	DDE_Tnp_1	1.27
PF00211	Guanylate_cyc	1.27
PF13546	DDE_5	1.27
PF12762	DDE_Tnp_IS1595	1.27
PF01797	Y1_Tnp	1.27
PF03412	Peptidase_C39	0.63
PF13173	AAA_14	0.63
PF00313	CSD	0.63
PF00239	Resolvase	0.63
PF13289	SIR2_2	0.63
PF02776	TPP_enzyme_N	0.63
PF01027	Bax1-I	0.63
PF09539	DUF2385	0.63
PF03837	RecT	0.63
PF07589	PEP-CTERM	0.63
PF01526	DDE_Tnp_Tn3	0.63
PF00694	Aconitase_C	0.63
PF05876	GpA_ATPase	0.63
PF13340	DUF4096	0.63
PF07690	MFS_1	0.63
PF00884	Sulfatase	0.63
PF12833	HTH_18	0.63
PF00670	AdoHcyase_NAD	0.63
PF02633	Creatininase	0.63
PF08238	Sel1	0.63
PF00929	RNase_T	0.63
PF13191	AAA_16	0.63
PF01329	Pterin_4a	0.63
PF03167	UDG	0.63
PF00383	dCMP_cyt_deam_1	0.63
PF01546	Peptidase_M20	0.63
PF01243	Putative_PNPOx	0.63
PF05685	Uma2	0.63
PF13551	HTH_29	0.63
PF07992	Pyr_redox_2	0.63
PF00908	dTDP_sugar_isom	0.63
PF13701	DDE_Tnp_1_4	0.63
PF02566	OsmC	0.63
PF04986	Y2_Tnp	0.63
PF01595	CNNM	0.63
PF09361	Phasin_2	0.63
PF01161	PBP	0.63

COG ID	Name	Functional Category	% Frequency in 158 Family Scaffolds
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	1.27
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	1.27
COG5421	Transposase	Mobilome: prophages, transposons [X]	1.27
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	1.27
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	1.27
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	1.27
COG3293	Transposase	Mobilome: prophages, transposons [X]	1.27
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	1.27
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.63
COG5525	Phage terminase, large subunit GpA	Mobilome: prophages, transposons [X]	0.63
COG4644	Transposase and inactivated derivatives, TnpA family	Mobilome: prophages, transposons [X]	0.63
COG4636	Endonuclease, Uma2 family (restriction endonuclease fold)	General function prediction only [R]	0.63
COG3723	Recombinational DNA repair protein RecT	Replication, recombination and repair [L]	0.63
COG3663	G:T/U-mismatch repair DNA glycosylase	Replication, recombination and repair [L]	0.63
COG0499	S-adenosylhomocysteine hydrolase	Coenzyme transport and metabolism [H]	0.63
COG2154	Pterin-4a-carbinolamine dehydratase	Coenzyme transport and metabolism [H]	0.63
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.63
COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase or related enzyme	Cell wall/membrane/envelope biogenesis [M]	0.63
COG1881	Uncharacterized conserved protein, phosphatidylethanolamine-binding protein (PEBP) family	General function prediction only [R]	0.63
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	0.63
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	0.63
COG1573	Uracil-DNA glycosylase	Replication, recombination and repair [L]	0.63
COG1402	Creatinine amidohydrolase/Fe(II)-dependent FAPy formamide hydrolase (riboflavin and F420 biosynthesis)	Coenzyme transport and metabolism [H]	0.63
COG0692	Uracil-DNA glycosylase	Replication, recombination and repair [L]	0.63

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	54.43 %
Unclassified	root	N/A	45.57 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	54.43 %
Unclassified	root	N/A	45.57 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	54.43 %
Unclassified	root	N/A	45.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.57 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	41.14 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.63 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.63 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.63 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.57 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	29.11 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.53 %
Acidithiobacillia	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia	0.63 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.63 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.63 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	0.63 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.63 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.57 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	18.99 %
Betaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis	1.90 %
Acidithiobacillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales	0.63 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	0.63 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.63 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	0.63 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.63 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	0.63 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.63 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.63 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.57 %
Roseiarcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae	7.59 %
Candidatus Accumulibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter	1.90 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.90 %
Acidithiobacillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales → Acidithiobacillaceae	0.63 %
Boseaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae	0.63 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	0.63 %
Synechococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	0.63 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.63 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.63 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	0.63 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.63 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.63 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.63 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.63 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	0.63 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.63 %
Gallionellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Gallionellaceae	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.57 %
Roseiarcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus	7.59 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.27 %
Candidatus Accumulibacter aalborgensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → Candidatus Accumulibacter aalborgensis	1.27 %
Candidatus Nitrotoga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Gallionellaceae → Candidatus Nitrotoga	0.63 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.63 %
unclassified Candidatus Accumulibacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → unclassified Candidatus Accumulibacter	0.63 %
unclassified Synechococcales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → unclassified Synechococcales	0.63 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.63 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	0.63 %
Beijerinckia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Beijerinckia	0.63 %
Acidiphilium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	0.63 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.63 %
Paracoccus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Paracoccus	0.63 %
Methylocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis	0.63 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	0.63 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.63 %
Acidithiobacillus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales → Acidithiobacillaceae → Acidithiobacillus	0.63 %
Bosea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.57 %
Roseiarcus fermentans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	7.59 %
Candidatus Accumulibacter aalborgensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → Candidatus Accumulibacter aalborgensis	1.27 %
Beijerinckia mobilis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Beijerinckia → Beijerinckia mobilis	0.63 %
Bradyrhizobium pachyrhizi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium pachyrhizi	0.63 %
Candidatus Accumulibacter sp. SK-11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → unclassified Candidatus Accumulibacter → Candidatus Accumulibacter sp. SK-11	0.63 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.63 %
Bosea lupini	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → Bosea lupini	0.63 %
Acidiphilium iwatense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium → Acidiphilium iwatense	0.63 %
Desulfatirhabdium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfatirhabdium	0.63 %
Candidatus Nitrotoga arctica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Gallionellaceae → Candidatus Nitrotoga → Candidatus Nitrotoga arctica	0.63 %
unclassified Methylobacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium	0.63 %
unclassified Paracoccus (in: a-proteobacteria)	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Paracoccus → unclassified Paracoccus (in: a-proteobacteria)	0.63 %
unclassified Nitrospira	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira	0.63 %
Synechococcales bacterium UBA10510	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → unclassified Synechococcales → Synechococcales bacterium UBA10510	0.63 %
Acidithiobacillus ferrivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales → Acidithiobacillaceae → Acidithiobacillus → Acidithiobacillus ferrivorans	0.63 %
unclassified Planctomycetaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae	0.63 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.63 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.63 %
Methylocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.57 %
Roseiarcus fermentans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	7.59 %
Candidatus Accumulibacter aalborgensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → Candidatus Accumulibacter aalborgensis	1.27 %
Paracoccus sp. XHP0099	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Paracoccus → unclassified Paracoccus (in: a-proteobacteria) → Paracoccus sp. XHP0099	0.63 %
Desulfatirhabdium butyrativorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfatirhabdium → Desulfatirhabdium butyrativorans	0.63 %
Methylobacterium sp. BTF04	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. BTF04	0.63 %
Planctomycetaceae bacterium SCGC AG-212-F19	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium SCGC AG-212-F19	0.63 %
Nitrospira sp.	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	0.63 %
Beijerinckia mobilis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Beijerinckia → Beijerinckia mobilis	0.63 %
Bradyrhizobium pachyrhizi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium pachyrhizi	0.63 %
Candidatus Accumulibacter sp. SK-11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → unclassified Candidatus Accumulibacter → Candidatus Accumulibacter sp. SK-11	0.63 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.63 %
Bosea lupini	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → Bosea lupini	0.63 %
Acidiphilium iwatense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium → Acidiphilium iwatense	0.63 %
Candidatus Nitrotoga arctica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Gallionellaceae → Candidatus Nitrotoga → Candidatus Nitrotoga arctica	0.63 %
Synechococcales bacterium UBA10510	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → unclassified Synechococcales → Synechococcales bacterium UBA10510	0.63 %
Acidithiobacillus ferrivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales → Acidithiobacillaceae → Acidithiobacillus → Acidithiobacillus ferrivorans	0.63 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.63 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.63 %
Methylocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis	0.63 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10463716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → Candidatus Accumulibacter aalborgensis	753	Open in IMG/M
3300003219\|JGI26341J46601_10094599	Not Available	878	Open in IMG/M
3300003368\|JGI26340J50214_10070630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Gallionellaceae → Candidatus Nitrotoga → Candidatus Nitrotoga arctica	928	Open in IMG/M
3300004080\|Ga0062385_10626277	Not Available	684	Open in IMG/M
3300004082\|Ga0062384_101417988	All Organisms → cellular organisms → Bacteria → Proteobacteria	512	Open in IMG/M
3300004091\|Ga0062387_101270746	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfatirhabdium → Desulfatirhabdium butyrativorans	580	Open in IMG/M
3300004152\|Ga0062386_101029091	Not Available	683	Open in IMG/M
3300004806\|Ga0007854_10279529	Not Available	695	Open in IMG/M
3300005921\|Ga0070766_10773925	All Organisms → cellular organisms → Bacteria → Proteobacteria	653	Open in IMG/M
3300006052\|Ga0075029_101315606	Not Available	507	Open in IMG/M
3300006086\|Ga0075019_11032606	Not Available	531	Open in IMG/M
3300006102\|Ga0075015_100549918	Not Available	670	Open in IMG/M
3300006102\|Ga0075015_100647713	Not Available	623	Open in IMG/M
3300006102\|Ga0075015_101032275	Not Available	504	Open in IMG/M
3300006795\|Ga0075520_1198667	All Organisms → cellular organisms → Bacteria → Proteobacteria	851	Open in IMG/M
3300009521\|Ga0116222_1065627	Not Available	1570	Open in IMG/M
3300009522\|Ga0116218_1061109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Beijerinckia → Beijerinckia mobilis	1712	Open in IMG/M
3300009522\|Ga0116218_1086036	All Organisms → cellular organisms → Bacteria	1432	Open in IMG/M
3300009522\|Ga0116218_1146078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	1074	Open in IMG/M
3300009523\|Ga0116221_1251152	Not Available	765	Open in IMG/M
3300009524\|Ga0116225_1264886	Not Available	770	Open in IMG/M
3300009524\|Ga0116225_1538617	Not Available	518	Open in IMG/M
3300009525\|Ga0116220_10298998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	708	Open in IMG/M
3300009525\|Ga0116220_10391926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	620	Open in IMG/M
3300009672\|Ga0116215_1276666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	732	Open in IMG/M
3300009672\|Ga0116215_1301656	Not Available	696	Open in IMG/M
3300009683\|Ga0116224_10533955	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300009698\|Ga0116216_10071406	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	2136	Open in IMG/M
3300009698\|Ga0116216_11000399	Not Available	500	Open in IMG/M
3300009700\|Ga0116217_10086489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	2167	Open in IMG/M
3300009700\|Ga0116217_10131278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1687	Open in IMG/M
3300009700\|Ga0116217_10535871	Not Available	733	Open in IMG/M
3300009824\|Ga0116219_10064975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	2147	Open in IMG/M
3300009824\|Ga0116219_10542462	All Organisms → cellular organisms → Bacteria → Proteobacteria	641	Open in IMG/M
3300009824\|Ga0116219_10681343	Not Available	563	Open in IMG/M
3300010049\|Ga0123356_13325522	Not Available	559	Open in IMG/M
3300010339\|Ga0074046_10018707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4900	Open in IMG/M
3300010339\|Ga0074046_10027737	All Organisms → cellular organisms → Bacteria	3884	Open in IMG/M
3300010339\|Ga0074046_10048168	All Organisms → cellular organisms → Bacteria	2840	Open in IMG/M
3300010339\|Ga0074046_10106840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1804	Open in IMG/M
3300010339\|Ga0074046_10201886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis	1250	Open in IMG/M
3300010339\|Ga0074046_10226671	Not Available	1167	Open in IMG/M
3300010339\|Ga0074046_10287944	Not Available	1012	Open in IMG/M
3300010339\|Ga0074046_10390008	Not Available	842	Open in IMG/M
3300010339\|Ga0074046_10414738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	812	Open in IMG/M
3300010339\|Ga0074046_10484728	Not Available	739	Open in IMG/M
3300010341\|Ga0074045_10021933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4983	Open in IMG/M
3300010341\|Ga0074045_10029555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → Bosea lupini	4156	Open in IMG/M
3300010341\|Ga0074045_10271835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1116	Open in IMG/M
3300010341\|Ga0074045_10410478	Not Available	877	Open in IMG/M
3300010341\|Ga0074045_10604516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium → Acidiphilium iwatense	699	Open in IMG/M
3300010341\|Ga0074045_10888458	Not Available	562	Open in IMG/M
3300010341\|Ga0074045_10891750	Not Available	561	Open in IMG/M
3300010343\|Ga0074044_10301831	All Organisms → cellular organisms → Bacteria → Proteobacteria	1053	Open in IMG/M
3300010343\|Ga0074044_10544254	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300010343\|Ga0074044_10725264	Not Available	649	Open in IMG/M
3300010379\|Ga0136449_100183798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4016	Open in IMG/M
3300010379\|Ga0136449_102177812	All Organisms → cellular organisms → Bacteria → Proteobacteria	810	Open in IMG/M
3300014152\|Ga0181533_1135600	All Organisms → cellular organisms → Bacteria → Proteobacteria	1029	Open in IMG/M
3300014153\|Ga0181527_1127804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium pachyrhizi	1145	Open in IMG/M
3300014155\|Ga0181524_10308226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	719	Open in IMG/M
3300014165\|Ga0181523_10763336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → Candidatus Accumulibacter aalborgensis	527	Open in IMG/M
3300014167\|Ga0181528_10694224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	568	Open in IMG/M
3300014491\|Ga0182014_10562252	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300014492\|Ga0182013_10682199	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	516	Open in IMG/M
3300014658\|Ga0181519_10176447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1353	Open in IMG/M
3300016371\|Ga0182034_11498789	Not Available	591	Open in IMG/M
3300016404\|Ga0182037_11644727	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium SCGC AG-212-F19	572	Open in IMG/M
3300016404\|Ga0182037_11875748	Not Available	536	Open in IMG/M
3300017821\|Ga0187812_1047930	All Organisms → cellular organisms → Bacteria	1445	Open in IMG/M
3300017924\|Ga0187820_1195084	Not Available	630	Open in IMG/M
3300017932\|Ga0187814_10393466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	539	Open in IMG/M
3300017933\|Ga0187801_10220745	Not Available	755	Open in IMG/M
3300017933\|Ga0187801_10318912	Not Available	635	Open in IMG/M
3300017935\|Ga0187848_10261647	Not Available	728	Open in IMG/M
3300017939\|Ga0187775_10283361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. BTF04	647	Open in IMG/M
3300017955\|Ga0187817_10084332	All Organisms → cellular organisms → Bacteria	1989	Open in IMG/M
3300017955\|Ga0187817_10997679	Not Available	536	Open in IMG/M
3300017966\|Ga0187776_10450382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	871	Open in IMG/M
3300017966\|Ga0187776_10603087	Not Available	765	Open in IMG/M
3300017966\|Ga0187776_11207848	Not Available	567	Open in IMG/M
3300017966\|Ga0187776_11287637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	552	Open in IMG/M
3300017966\|Ga0187776_11593340	Not Available	505	Open in IMG/M
3300017973\|Ga0187780_11441738	Not Available	508	Open in IMG/M
3300017974\|Ga0187777_11469900	Not Available	504	Open in IMG/M
3300017975\|Ga0187782_10378370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Paracoccus → unclassified Paracoccus (in: a-proteobacteria) → Paracoccus sp. XHP0099	1074	Open in IMG/M
3300017975\|Ga0187782_10893643	Not Available	689	Open in IMG/M
3300017975\|Ga0187782_11074455	Not Available	627	Open in IMG/M
3300018012\|Ga0187810_10461805	Not Available	539	Open in IMG/M
3300018023\|Ga0187889_10293805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	720	Open in IMG/M
3300018032\|Ga0187788_10563381	Not Available	500	Open in IMG/M
3300018038\|Ga0187855_10764539	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300018057\|Ga0187858_10650467	Not Available	632	Open in IMG/M
3300018058\|Ga0187766_10607620	Not Available	747	Open in IMG/M
3300018058\|Ga0187766_10611137	Not Available	745	Open in IMG/M
3300018058\|Ga0187766_10901482	Not Available	624	Open in IMG/M
3300018062\|Ga0187784_11002891	Not Available	664	Open in IMG/M
3300018062\|Ga0187784_11616536	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300018062\|Ga0187784_11651289	Not Available	507	Open in IMG/M
3300018085\|Ga0187772_10243323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → unclassified Synechococcales → Synechococcales bacterium UBA10510	1220	Open in IMG/M
3300018085\|Ga0187772_10666309	Not Available	744	Open in IMG/M
3300018085\|Ga0187772_11112150	Not Available	580	Open in IMG/M
3300018085\|Ga0187772_11245594	Not Available	549	Open in IMG/M
3300018086\|Ga0187769_10131036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1824	Open in IMG/M
3300018086\|Ga0187769_10131518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	1821	Open in IMG/M
3300018086\|Ga0187769_10254014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1308	Open in IMG/M
3300018086\|Ga0187769_10487148	Not Available	930	Open in IMG/M
3300018086\|Ga0187769_10779652	All Organisms → cellular organisms → Bacteria → Proteobacteria	723	Open in IMG/M
3300018089\|Ga0187774_11418431	All Organisms → cellular organisms → Bacteria → Proteobacteria	510	Open in IMG/M
3300018090\|Ga0187770_11460990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	556	Open in IMG/M
3300018090\|Ga0187770_11559818	Not Available	538	Open in IMG/M
3300023090\|Ga0224558_1096118	Not Available	1046	Open in IMG/M
3300027023\|Ga0207736_104391	Not Available	925	Open in IMG/M
3300027497\|Ga0208199_1130313	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300027729\|Ga0209248_10029872	All Organisms → cellular organisms → Bacteria	1699	Open in IMG/M
3300027729\|Ga0209248_10038710	All Organisms → cellular organisms → Bacteria → Proteobacteria	1479	Open in IMG/M
3300027824\|Ga0209040_10017295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4796	Open in IMG/M
3300027824\|Ga0209040_10034298	Not Available	3178	Open in IMG/M
3300027829\|Ga0209773_10013999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3096	Open in IMG/M
3300027829\|Ga0209773_10041743	Not Available	1840	Open in IMG/M
3300027854\|Ga0209517_10114081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	1791	Open in IMG/M
3300027911\|Ga0209698_10176778	All Organisms → cellular organisms → Bacteria	1737	Open in IMG/M
3300027911\|Ga0209698_10554443	All Organisms → cellular organisms → Bacteria → Proteobacteria	886	Open in IMG/M
3300028877\|Ga0302235_10214385	Not Available	846	Open in IMG/M
3300029913\|Ga0311362_10841741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	749	Open in IMG/M
3300030529\|Ga0210284_1392941	Not Available	500	Open in IMG/M
3300030629\|Ga0210268_1227359	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300030659\|Ga0316363_10024922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3161	Open in IMG/M
3300030706\|Ga0310039_10204129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	777	Open in IMG/M
3300030707\|Ga0310038_10056972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	2176	Open in IMG/M
3300030707\|Ga0310038_10363391	Not Available	637	Open in IMG/M
3300030738\|Ga0265462_10023985	Not Available	1706	Open in IMG/M
3300031051\|Ga0074029_1478582	Not Available	618	Open in IMG/M
3300031057\|Ga0170834_106722288	Not Available	514	Open in IMG/M
3300031234\|Ga0302325_11132784	Not Available	1050	Open in IMG/M
3300031259\|Ga0302187_10491222	Not Available	564	Open in IMG/M
3300031446\|Ga0170820_10841436	Not Available	747	Open in IMG/M
3300031708\|Ga0310686_100957967	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → unclassified Candidatus Accumulibacter → Candidatus Accumulibacter sp. SK-11	2185	Open in IMG/M
3300031708\|Ga0310686_102149992	Not Available	560	Open in IMG/M
3300031754\|Ga0307475_11234353	Not Available	581	Open in IMG/M
3300031788\|Ga0302319_10774571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	956	Open in IMG/M
3300031792\|Ga0318529_10507099	Not Available	561	Open in IMG/M
3300031823\|Ga0307478_11205225	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales → Acidithiobacillaceae → Acidithiobacillus → Acidithiobacillus ferrivorans	630	Open in IMG/M
3300032008\|Ga0318562_10506281	All Organisms → cellular organisms → Bacteria → Proteobacteria	700	Open in IMG/M
3300032076\|Ga0306924_11087985	All Organisms → cellular organisms → Bacteria	872	Open in IMG/M
3300032160\|Ga0311301_10023891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	16743	Open in IMG/M
3300032160\|Ga0311301_10175715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3763	Open in IMG/M
3300032160\|Ga0311301_10347143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	2325	Open in IMG/M
3300032160\|Ga0311301_10375118	Not Available	2200	Open in IMG/M
3300032160\|Ga0311301_10676781	All Organisms → cellular organisms → Bacteria	1459	Open in IMG/M
3300032160\|Ga0311301_10947867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1149	Open in IMG/M
3300032515\|Ga0348332_10906871	Not Available	1049	Open in IMG/M
3300032805\|Ga0335078_11210895	All Organisms → cellular organisms → Bacteria → Proteobacteria	871	Open in IMG/M
3300032892\|Ga0335081_12345815	Not Available	556	Open in IMG/M
3300032954\|Ga0335083_10848828	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	729	Open in IMG/M
3300033158\|Ga0335077_11765432	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300033405\|Ga0326727_10235078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1924	Open in IMG/M
3300033755\|Ga0371489_0006121	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12579	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.37%
Host-Associated	Host-Associated	0.63%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.32%
Aquatic	Environmental → Aquatic	24.05%
Arthropoda	Host-Associated → Arthropoda	0.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	69.62%
Freshwater	Environmental → Aquatic → Freshwater	19.62%
Peat	Environmental → Terrestrial → Peat	5.06%
Sediment	Environmental → Aquatic → Sediment	4.43%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.63%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.63%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	35.44%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	32.28%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	18.99%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	5.06%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.43%
Loam	Environmental → Terrestrial → Soil → Loam	1.90%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.63%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.63%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	34.18%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.78%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	13.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.86%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.06%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	5.06%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.43%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.90%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.27%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	0.63%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.63%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.63%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	21.52%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	18.99%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	12.66%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	7.59%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	5.06%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.43%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.80%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.53%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.53%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.27%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.27%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.27%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.27%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.27%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.27%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	0.63%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.63%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.63%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.63%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.63%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.63%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.63%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.63%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004806	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug08	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006795	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010049	Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3	Host-Associated	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300014152	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_60_metaG	Environmental	Open in IMG/M
3300014153	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_60_metaG	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300023090	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 20-24	Environmental	Open in IMG/M
3300027023	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 1 (SPAdes)	Environmental	Open in IMG/M
3300027497	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028877	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3	Environmental	Open in IMG/M
3300029913	III_Bog_N3 coassembly	Environmental	Open in IMG/M
3300030529	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO740-VDE013SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030629	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO153-ARE093SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300030738	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VDE Co-assembly	Environmental	Open in IMG/M
3300031051	Metatranscriptome of forest soil microbial communities from Dalarna County, Sweden - Site 2 - Humus C1 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031259	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E1_3	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033755	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB26FY SIP fraction	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_104637161	3300001593	Forest Soil	MTNDPLDAMMARWNHIQGSLFPWLREEVDPITEAL
JGI26341J46601_100945992	3300003219	Bog Forest Soil	MTDDPLDAMKARWSYIQGFLFPWMREDNDPITEALGRVVTTLDVIGLE
JGI26340J50214_100706301	3300003368	Bog Forest Soil	MTDDPLDAMKARWSYIQGFLFPWMREDNDPITEALGRLVTTLDVIG
Ga0062385_106262771	3300004080	Bog Forest Soil	MDDIDPLTAMWARWNHIQPSLFPWLREEIDPLTEMLGHLVVVLD
Ga0062384_1014179881	3300004082	Bog Forest Soil	MTSDPLDAMKARWNHIQGSLFPWLREAVDPMTEALGRLVPLDVIGLEAFVPEPPRGAGR
Ga0062387_1012707461	3300004091	Bog Forest Soil	MTDDPLDAMMVRWNHIQGSLFPWLREEVDPITEALGRLVTTLDVI
Ga0062386_1010290912	3300004152	Bog Forest Soil	MTDDPLDAMKARWSYIQGYLFPWMREDNDPITEALGRLVTTLDV
Ga0007854_102795291	3300004806	Freshwater	MIDDPLDAMKARWSYIQDYLFLWMREDIDPITEALGRLITTLDVIGLEAFVPDPPR
Ga0070766_107739251	3300005921	Soil	MPDDPLDAMKARWNHIQGYLFPWLREEVDPITEALGRLVTTLDVIGLEAFVPEPPRTAPRRRPPA*
Ga0075029_1013156061	3300006052	Watersheds	MTDDPLDAMKGRWNHIQGYLFPWLREEVDPMTEALGRLVTTLDVIGLEAF
Ga0075019_110326062	3300006086	Watersheds	MADDPLDAMKWRWSYIQGFLFPSMREDIDPITEALGRLVTTLDVIGLEAFVPEPPRGP
Ga0075015_1005499181	3300006102	Watersheds	MTDDPLDAMKARWNPIQGYLFPWLREEVDPMTEALGRLVTTLDVIGLEAFVPE
Ga0075015_1006477131	3300006102	Watersheds	MTDDPLDAMKARWNHIQGSLFPWLREDVDPMTEALGRLVTTLDVIG
Ga0075015_1010322751	3300006102	Watersheds	MADDPLDAMKWRWSYIQGYLFPSMREDIDPITEALGRLVTTLDVIGLEAFVP
Ga0075520_11986672	3300006795	Arctic Peat Soil	MSDDPLDAMKARWNHIQGSLFPWLREEIDPITEALGRLVTTLD
Ga0116222_10656272	3300009521	Peatlands Soil	MSDDPLDAMKARWNHIQGTLFPWLREEVDPMTEALGRLVT
Ga0116218_10611091	3300009522	Peatlands Soil	MTDDPLDAMKARWSYIQGFLFPWMREDNDPITEALG
Ga0116218_10860363	3300009522	Peatlands Soil	MKARWNHIQGDLFPWLREEVDPITEALGRLVTTLDVIGLEAFVP
Ga0116218_11460783	3300009522	Peatlands Soil	MTDDHLDAMKARWSYIQGFLFPWMREDNDPITEALGRVVT
Ga0116221_12511521	3300009523	Peatlands Soil	MTDDPLDAMKARWNHIQGYLFPWLREEVDPMTEALGRLVTTL
Ga0116225_12648861	3300009524	Peatlands Soil	MTDDPLDAMMARWSYIQGFLFPWMHEDNDPITEALGRLVTTLDVIGLE
Ga0116225_15386171	3300009524	Peatlands Soil	MTDDPLDAMKARWSYIQGSLFPWMREDNDPITEALGRLITTL
Ga0116220_102989981	3300009525	Peatlands Soil	MTDDPLDAMKARWSYIQGFLFPWMREDNDPITETLGRL
Ga0116220_103919261	3300009525	Peatlands Soil	MTNDPLDAMKARWNHIQGTLFPWLREEVDPMTEALGRHVTTLDVIGLEA
Ga0116215_12766662	3300009672	Peatlands Soil	MTNDPLDAMKARWNHIQGTLFPWLREEVDPMTEALGRLVTTLD
Ga0116215_13016562	3300009672	Peatlands Soil	MTTDPLDAMKARWNHIQGTLFPWLREEVDPMTEALGRLVTTLDVIGLE
Ga0116224_105339552	3300009683	Peatlands Soil	MKARWSYIQGFLFPWMREDNDPITETLGRLVTTLDVI
Ga0116216_100714064	3300009698	Peatlands Soil	MTDDHLDAMKARWSYIQGFLFPWMREDNDPITEALGRLVTTL
Ga0116216_110003991	3300009698	Peatlands Soil	MTDDPLDATKARWSYIQGFLFPWMREDNDPITEALGRLVT
Ga0116217_100864891	3300009700	Peatlands Soil	MTDDHLDAMKARWSYIQGFLFPWMREDNDPITEALGRLVTTLDVI
Ga0116217_101312781	3300009700	Peatlands Soil	MTDDPLDAMKARWNHIQGYLFPWLREEVDPITEALGRLVTTLDVIGLEAFVPEPPRG
Ga0116217_105358711	3300009700	Peatlands Soil	MTTDPLDAMKARWNHIQGTLFPWLREEVDPMTEALGRLVTTLD
Ga0116219_100649751	3300009824	Peatlands Soil	MTDDHLDAMKARWSYIQGFLFPWMREDNDPITEALGRLV
Ga0116219_105424622	3300009824	Peatlands Soil	MTDDPLDAMMARWSYIQGFLFPWMHEDNDPITEALGRLVTTLDVIGLEAFVPEPP
Ga0116219_106813431	3300009824	Peatlands Soil	MTNDPLDAMKARWSHIQNSLFPWLREEVEPMTELLGRLVTILDVIGLEAFV
Ga0123356_133255221	3300010049	Termite Gut	MTDDPLDVMKWRWSYIQSYLFPSMHEDIDPITEALGRLVTTLDVIGLEAFVPEPPRG
Ga0074046_100187071	3300010339	Bog Forest Soil	MTDDPLDAMKARWNHIQGYLFPWLREEVDPMTEAL
Ga0074046_100277371	3300010339	Bog Forest Soil	MTDDPLDAMKARWSYIQGFLFPWVREDNDPITEALGRVVTTLDVIGLEAFVPEPPRG
Ga0074046_100481681	3300010339	Bog Forest Soil	MTDDPLDATKARWNHIQGYLFPWLREEVDPMTEALGRLVTTLDVIGLEA
Ga0074046_101068403	3300010339	Bog Forest Soil	MTDDPLDAMKARWNHIQGTLFPWLREEIDPMTEALGRLVTALDVI
Ga0074046_102018861	3300010339	Bog Forest Soil	VAEEMTDPLDDMKARWSHLQSFLFPWLREEVEPMTELL
Ga0074046_102266712	3300010339	Bog Forest Soil	MTDDPLDAMKARWSYIQGFLFPWMREDNDPITEALGRVVTTLDVIGLEAFVPEPPRGP
Ga0074046_102879441	3300010339	Bog Forest Soil	LKARWSYIQGFLFPWMREDNDPITEALGRVVTTLDVIGLEA
Ga0074046_103900081	3300010339	Bog Forest Soil	MTDDPLDALKARWSYIQGFLFPWMREDNDPITEAL
Ga0074046_104147382	3300010339	Bog Forest Soil	MSDDPLDAMKARWSHIQGTLFPWLREEVDPITEALGRLV
Ga0074046_104847281	3300010339	Bog Forest Soil	MADDPLDAMKWRWSYIQGFLFPSMREDIDPITEALGRLVTTLDVIGLEAFVPEPP
Ga0074045_100219331	3300010341	Bog Forest Soil	MSDDPLDAMKARWNHIQGTLFPWLREEVDPMTETLG
Ga0074045_100295558	3300010341	Bog Forest Soil	MTDDPLDAMKARWNPIQGYLFPWLREEVDPITEALGR
Ga0074045_102718351	3300010341	Bog Forest Soil	MATAMTDDPLDAMKPRWNHIQGYLFPWLREEVDPMTEALGRLVTTLDV
Ga0074045_104104782	3300010341	Bog Forest Soil	MTDDPLDAMKARWSYIQGFLFPWMREDNDPITEALGRVVTTLDVIGLEAFVPEPPR
Ga0074045_106045161	3300010341	Bog Forest Soil	MSDDPLDAMKARWNHIQGTLFPWLREEVDPMTEALGRLVTTLDVIGLE
Ga0074045_108884582	3300010341	Bog Forest Soil	MNDDPLDAIKARWNHIQGYLFPWLREEVDPMTEALGRLVTTLDVIGLEAFVPEPPRGPG
Ga0074045_108917501	3300010341	Bog Forest Soil	MKARWNHIQGYLFPWLGEEVDPMTEALGRLVTTLDVIGLEA
Ga0074044_103018312	3300010343	Bog Forest Soil	MTDDPLDAMKARWSYIQGSLFPWMREDNDPITEALGRLITTLDVIGLEAFVPEPPR
Ga0074044_105442541	3300010343	Bog Forest Soil	MTDDPLDAMKARWSYIQGFLFPWMREDNDPITEALGRL
Ga0074044_107252641	3300010343	Bog Forest Soil	MTDDPLDAMKARWNHIQGYLFPWLREEVDPITEALGRL
Ga0136449_1001837981	3300010379	Peatlands Soil	MKARWSYIQGFLFPWMREDNDPITETLGRLVTTLDVIG
Ga0136449_1021778122	3300010379	Peatlands Soil	MIDPVDAMWARWNHVQSSLFPWMREEVEPMTELLGRLI
Ga0181533_11356001	3300014152	Bog	LIDVGFDRRPVGAMKARGSHIQGFLFPWLGEAIEPMTELLGRLVAILDVI
Ga0181527_11278041	3300014153	Bog	IDVGFDRRPVGAMKARGSHIQGFLFPWLGEAIEPMTELLGRLVAILDVIGLEAFVPDL*
Ga0181524_103082262	3300014155	Bog	LIDVGFDRRPVGAMKARGSHIQGFLFPWLGEAIEPMTELLGRLVAILDVIGLEAFVPDL*
Ga0181523_107633362	3300014165	Bog	MSDDPLDAMKARWSHIQGTLFPWLREEVDPITEAL
Ga0181528_106942242	3300014167	Bog	MTDLLDDMIARWSHIQSFLFPWLREEVEPMTELLGRLVTVLDVIGLESF
Ga0182014_105622522	3300014491	Bog	MSDDPLDAMKARWNHIQASLFPWLREEVDPLTEALGQLVTILDVIGLEA
Ga0182013_106821992	3300014492	Bog	MPNDPLDAMKARWNHIQGSLFPWLREEVDPLTEALGRLV
Ga0181519_101764473	3300014658	Bog	MTDPLDDMKARWSHIQSFLFPWLREEVEPMTELLGRL
Ga0182034_114987891	3300016371	Soil	MTDDPLDAMKWRWSYIQGYLFPSMREDIDPITEALGRLVTTLDVIGLEAFVPAPPR
Ga0182037_116447272	3300016404	Soil	MTDDPLDAMKWRWSYIQGYLFPSMREDIDPVTEALGRLVTTLDVIGLEAFVPDPPRTPG
Ga0182037_118757481	3300016404	Soil	MTDDPLDEMKWRWSYIQGYLFPSMREDIDPINEALGRRLVTTLDVIGLE
Ga0187812_10479303	3300017821	Freshwater Sediment	MTDDPLDAMKARWNHIQGTLFPLLREEVDPMTEALGRLVTTLDVIGLEAFVAEPPRGAPPACRSPRP
Ga0187820_11950841	3300017924	Freshwater Sediment	MSDDSLDAMKARWNHIQGTLFPWLREEVDPMTEALGRLVT
Ga0187814_103934661	3300017932	Freshwater Sediment	MTNDPLDAMKARWNHIQGTLFPWLREEVDPMTEALGR
Ga0187801_102207452	3300017933	Freshwater Sediment	MTNDPLDAMKARWNHIQGTLFPWLREEVDPMTEALGRLVTTL
Ga0187801_103189122	3300017933	Freshwater Sediment	MINDPLDAMKARWNHIQGTLFPWLREEVDPMTEALGRLVTTL
Ga0187848_102616471	3300017935	Peatland	MTNDPLDAMKAHWSHIQSSLFPWLREEVEPMTELLGRLVTI
Ga0187775_102833611	3300017939	Tropical Peatland	MTDDPLDAMKWRWSYILGYLFPSMREDIDPITEALGR
Ga0187817_100843324	3300017955	Freshwater Sediment	MADDPLDAMKARWSYIQGFLFPWMREDNDPITEALGRLVTTLDVIGLEAFVPEPP
Ga0187817_109976791	3300017955	Freshwater Sediment	MTNDPLDAMKARWNHIQGTLFPWLREEIDPMTEALGR
Ga0187776_104503822	3300017966	Tropical Peatland	MSDDPLDAMKARWSHIQASLFPWLREEIDPMTEALGRQGRSVL
Ga0187776_106030871	3300017966	Tropical Peatland	MTDDPLDAIKARWSHIQGYLQGHLFPWMREDDDPVTEALGRL
Ga0187776_112078482	3300017966	Tropical Peatland	MTDDPLDAMKWRWSYIQGYLFPSMREDIDPITEALGRLVTALDVIGLEAFVPDPPRAPGRPPRTVAPS
Ga0187776_112876371	3300017966	Tropical Peatland	MTDDPLDAMKWRWGYIQGYLFPSMREDIDPTTTALGRLVTTLDVIGLEA
Ga0187776_115933401	3300017966	Tropical Peatland	MSDDPLDAIKARWSHIQGYLQGHLFPWMREDDDPVTEALGRLVTTLDVIGLEAFVPEPPRGP
Ga0187780_114417381	3300017973	Tropical Peatland	MTDDPLDAMKWRWSYIQGYLFSSMHEDIDPITEAWGRLVTTLDVIGLEAFVPDPPRAP
Ga0187777_114699001	3300017974	Tropical Peatland	MTDDPLDAMKWRWSYIQGYLFPSMREDIDPITEALGRLVTTLDVIGLEAFV
Ga0187782_103783701	3300017975	Tropical Peatland	MDMTDDPLDAMKARWNHIQGFLFPWMREELDPNNEALGRVVTALDVIGLEAFV
Ga0187782_108936431	3300017975	Tropical Peatland	MSDDPLDAIKARWSHIQGYLQGHLFPWMREDNDPITEALG
Ga0187782_110744551	3300017975	Tropical Peatland	MSDDPLEAMKARWNYIQRSLFPWLREDVDPMTEALEQLVTTLDVI
Ga0187810_104618051	3300018012	Freshwater Sediment	MTNDPLDAMKARWNHIQGTLFPWLREEVDPMTEALG
Ga0187889_102938052	3300018023	Peatland	LIDVGFDRRPVGAMKARGSHIQGFLFPWLGEAIEPMTELLGRLVAILDVIGLEAFVPDL
Ga0187788_105633812	3300018032	Tropical Peatland	MNDDPLDAMKWRWSYIQGYLFPSMREDIDPITEALGRLVTTLDGIGLEAFV
Ga0187855_107645392	3300018038	Peatland	LAVDMTDDPLDAMKARWSYIQGFLFPWMREDNDPITEALGRLVTTLDVIGLEAFVPEPPR
Ga0187858_106504671	3300018057	Peatland	MSDDPLDAMKARWNNIQGTLFPWLREEVDPMTEPLGRLVTTLDVI
Ga0187766_106076201	3300018058	Tropical Peatland	LVLALDMTDDPLDAIKARWSHIQGYLQGHLFPWMREDDDPVTEALGRLVTTLDVIGL
Ga0187766_106111372	3300018058	Tropical Peatland	MTDDPLDAIEARWSHIQGYLQGHLFPWMREDNDPITEALGRLVTTRDVIGLEAFVPEPPRGPGRPPE
Ga0187766_109014821	3300018058	Tropical Peatland	MTDDPLDAMKWRWSYIQGYLFPSMREDIDPITEALGRLVTTLDVIGLEAFVPEPPRGPGRLLTARHLVKSQPHGMHT
Ga0187784_110028911	3300018062	Tropical Peatland	PIDARKARWSHIQGFLFPWMGEEIDPVTEALGRLVATLGVIGLDAVARRYALSI
Ga0187784_116165361	3300018062	Tropical Peatland	MDMTDDPLGAMKARWNHVQGFLFPWMREDLDPITEALGRVVTALDV
Ga0187784_116512891	3300018062	Tropical Peatland	MTDDPLDAIKARWSHIQGYLQGHLFPWMREDDDPITEALGRLVTTLDVIGLEAFV
Ga0187772_102433232	3300018085	Tropical Peatland	MTDDPLDAMKARWSYIQGYLFPWMREDNDPITEALGRLVTTLDVIGLEAFVPEPPR
Ga0187772_106663091	3300018085	Tropical Peatland	MTDDPLDAIKARWSHIQGYLQGHLFPWMREDNDPITEALGRVVTT
Ga0187772_111121501	3300018085	Tropical Peatland	MNDDPLDAMKWRWSYIQGYLFPSMREDIDPITEALGRLVTTL
Ga0187772_112455941	3300018085	Tropical Peatland	MKARWSHIQASLFPWLREEIDPMTEALGRLVTTLDVIGLEA
Ga0187769_101310361	3300018086	Tropical Peatland	MTDDPLDAIKARWSHIQGYLQGHLFPWMREDDDPITEALG
Ga0187769_101315181	3300018086	Tropical Peatland	MTDDPLDAMKWRWSYIQGYLFPSMREDIDPITEALGRLVTTLDVIGLEAF
Ga0187769_102540144	3300018086	Tropical Peatland	MTDDPLDAIKARWSHIQGYLQGHLFPWMREDDDPITEAL
Ga0187769_104871482	3300018086	Tropical Peatland	MTDDPLDAMKWRWSYIQGYLFPSMREDIDPITEALGRLVTTLD
Ga0187769_107796523	3300018086	Tropical Peatland	MTDDPLDAMKARWSYIQGYLFPWMREDNDPVTEALGRLVTTLDVI
Ga0187774_114184312	3300018089	Tropical Peatland	MTDDPLDAMKWRWSYIQGYLFPSMREDIDPITEALGRLVTALDVIGLEAFVPDPPRAPG
Ga0187770_114609901	3300018090	Tropical Peatland	MTDNPLDAIKARWSHIQGYLQGHLFPWMREDNDPITEALGRVVTTLDVIGL
Ga0187770_115598182	3300018090	Tropical Peatland	MTDDPLDAMKARWSHIQGFLFPWMREEIDPITEALGRLVTTLDVIGLEAFVPEP
Ga0224558_10961181	3300023090	Soil	MTNDPLDAMKARWSHIQSSLFPWPREEVEPMTELLGRLATILDVIG
Ga0207736_1043911	3300027023	Tropical Forest Soil	MTDDPLDAMKARWNHIQGYLFPWLREEVDPMTEALGRLVTTLDVIGLE
Ga0208199_11303131	3300027497	Peatlands Soil	MTDDPLDAMKARWSYIQGFLFPWMREDNDPITEALGRLVT
Ga0209248_100298721	3300027729	Bog Forest Soil	MTIDPLDAMKARWNHIQGSLFPWLREEVDPITEAL
Ga0209248_100387102	3300027729	Bog Forest Soil	MTNDPLDAMKARWNHIQGSLFPWLREEVDPITEAL
Ga0209040_100172957	3300027824	Bog Forest Soil	MNMTDDPLDAMKWRWSYIQGYLFPSMREDIDPITEALGRLVT
Ga0209040_100342981	3300027824	Bog Forest Soil	MTDDPLDAMKARWSYIQGFLFPWMREDNDPITEALGRLVTTLDVIGLEAFVPEP
Ga0209773_100139994	3300027829	Bog Forest Soil	MTNDPLDAMMAHWNHIQGSLFPWLREEVDPITEALGRLVTTLDV
Ga0209773_100417431	3300027829	Bog Forest Soil	MTDDPLDAMKARWSYIQGFLFPWMREDNDPITEALGRLVTTLDVIGLEAFVPEPPR
Ga0209517_101140814	3300027854	Peatlands Soil	MTNDPLDAMKARWNHIQGTLFPWLREEVDPMTEALGRL
Ga0209698_101767781	3300027911	Watersheds	MTDDPLDAMKGRWNHIQGYLFPWLREEVDPMTEALGRLVTTLD
Ga0209698_105544431	3300027911	Watersheds	MTDDPLDAMKARWNHIQGYLFPWLREDVDPMTEALGRLVTTLD
Ga0302235_102143853	3300028877	Palsa	MTNDPLDAMKARWSHIQGSLFPWLREEVDPLTEALGRLVT
Ga0311362_108417411	3300029913	Bog	VKIYMTNDPLDAMKARWNHIQGSLFPWLREEVDPI
Ga0210284_13929412	3300030529	Soil	MATEMTDDPLDAMKARWNHIQGYLFPWLREEVDPMTEALGRLVTTLDVIGLEAFVP
Ga0210268_12273592	3300030629	Soil	MTNDPLDAMKARWNHIQGSLFPWLREEVDPITEALG
Ga0316363_100249224	3300030659	Peatlands Soil	MTDDPLDAMKARWNHIQGYLFPWLREEVDPMTEALGRLVTTLDVIGLEAFVPEPPRGA
Ga0310039_102041291	3300030706	Peatlands Soil	MTNDPLDAMKARWNHIQGTLFPWLREEVDPMTEALGRLVTTLDV
Ga0310038_100569721	3300030707	Peatlands Soil	MTDDHLDAMKARWSYIQGFLFPWMREDNDPITEALGRLVTTLDVIGL
Ga0310038_103633911	3300030707	Peatlands Soil	MTDDPLDAMKARWSYIQGFLFPWMREDNDPITEALGRLVTTLDVIGL
Ga0265462_100239852	3300030738	Soil	MTDDPLDAMKARWNHIQGYLFPWLREEVDPMTEALGRLVTTLDVIGLEAFVRTAPRRRPP
Ga0074029_14785821	3300031051	Soil	MTNDPLDAMMARWNHIQGSLFPWLREEVDPITEALGRLVTTLDVIGL
Ga0170834_1067222881	3300031057	Forest Soil	MTNDPLDAMMARWNNIQGSLFPWLREEVDPITEALGRLVTTLDV
Ga0302325_111327842	3300031234	Palsa	MTDDPLDAMKARWSYIQGFLFPWMREDNDPITEALGRLVTTLDVIGLEAFVP
Ga0302187_104912222	3300031259	Bog	MPNDPLDAMKARWNHIQGSLFPWLREEVDPLTEALGRLVT
Ga0170820_108414363	3300031446	Forest Soil	MTDDPLDAMKARWSYIQGFLFPWMREDNDPITEALGRLV
Ga0310686_1009579671	3300031708	Soil	MTNDPLGAMKARWNHIQSSLFPWLREEVDPLTEALGRLVTTLDMIG
Ga0310686_1021499921	3300031708	Soil	MTNDPLDAMKARWSHIQGSLFPWLREEVDPLTEALGRLVTTLDVIG
Ga0307475_112343532	3300031754	Hardwood Forest Soil	MTNDPLDAMKARWNHIQGSLFPWLREEVDPITEALGRLVTTLDVIGLEA
Ga0302319_107745712	3300031788	Bog	VKIYMTNDPLDAMKARWNHIQGSLFPWLREEVDPITEALGRL
Ga0318529_105070991	3300031792	Soil	MIDDPLDAMKWRWSYIQGYLFPSMNEDIDPITEALG
Ga0307478_112052252	3300031823	Hardwood Forest Soil	MSRWNHIQRSLFPWLREEVDPITEALGRLVTTLDVIGLEAFVPEP
Ga0318562_105062811	3300032008	Soil	MSDDPLDTTKWRSSDIQGYLFPSMREDIDPINEALGRLVTTLDVIGLEAFVPDPPR
Ga0306924_110879851	3300032076	Soil	MADDPLDAMKWRWSYIQGYLFPSMREDIDPITEALGRLV
Ga0311301_1002389119	3300032160	Peatlands Soil	MTDDPLDAMKARWSYIQGFLFPWMREDNDPITETLGRLV
Ga0311301_101757151	3300032160	Peatlands Soil	MTDDPLDAMKARWNHIQGDLFPWLREEVDPITEALGRLVTTLDVIGLEAFVPEPPRG
Ga0311301_103471433	3300032160	Peatlands Soil	MTDDPLDAMMARWSYIQGSLFPWMHEDNDPITEALGRLVTTLDVIGLEAFVPEP
Ga0311301_103751182	3300032160	Peatlands Soil	MTDDPLDAMKARWNHIQGYLFPWLREEVDPMTEALGRLV
Ga0311301_106767814	3300032160	Peatlands Soil	MTDPLDAMKARWSHIQGSLFPWLGEEIEPMTELLGRLVTILD
Ga0311301_109478671	3300032160	Peatlands Soil	MTDDPLDAMKARWSYIQGFLFPWMREDNDPITEALGRLVTTLDVIGLEAFVPEPP
Ga0348332_109068711	3300032515	Plant Litter	MTNDPLDAMMARWNHIHGSLFPWLREEVDPITEALGRLVTTLDVIGLEAFVP
Ga0335078_112108953	3300032805	Soil	MTDDPLDAMKWRWSYIQDYLFPSMREDVGPITEALGRLVT
Ga0335081_123458151	3300032892	Soil	MTDDPLDAMKWRWSYIQGYLFPWMREDNDPITEALGRVVTTLDVIGLEAFVPEPPRG
Ga0335083_108488282	3300032954	Soil	MKARWSHIQGTLFPWLREEVDPMTEALGRLVTTLDVIGPEAF
Ga0335077_117654321	3300033158	Soil	MTDDPLDAMKWRWSYIQGYLFPSMREDIDPITEALGRLVTALDVIGLEAFVPDPPR
Ga0326727_102350784	3300033405	Peat Soil	MSDDSLDAMWARWNHIQASLFPWLREEVEPMTEQLGRLI
Ga0371489_0006121_1_123	3300033755	Peat Soil	MSDDSLDAMWARWNHIQASLFPWLREEVEPMTEQLGRLITI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F042247

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences