Metagenome / Metatranscriptome Family F042047

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F042047
Family Type	Metagenome / Metatranscriptome
Number of Sequences	159
Average Sequence Length	58 residues
Representative Sequence	MPTVEQCRAYAANYKTLGADPANSARRSAVLMSISRSWTALANQFDDLAIIVKSEG
Number of Associated Samples	117
Number of Associated Scaffolds	159

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	57.59 %
% of genes near scaffold ends (potentially truncated)	47.80 %
% of genes from short scaffolds (< 2000 bps)	90.57 %
Associated GOLD sequencing projects	105
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.77

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (79.874 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (8.805 % of family members)
Environment Ontology (ENVO)	Unclassified (56.604 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (81.132 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.76% β-sheet: 0.00% Coil/Unstructured: 45.24%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.77
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.77
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.25.1.1: Ferritin	d3ka8a_	3ka8	0.86942
a.25.1.1: Ferritin	d1z6om1	1z6o	0.86045
a.25.1.0: automated matches	d7o6ea_	7o6e	0.85765
a.25.1.1: Ferritin	d4iwka_	4iwk	0.85631
a.25.1.1: Ferritin	d3bvfa1	3bvf	0.85578

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 159 Family Scaffolds
PF14534	DUF4440	2.52
PF12680	SnoaL_2	1.89
PF04613	LpxD	1.89
PF01921	tRNA-synt_1f	1.26
PF03466	LysR_substrate	0.63
PF01545	Cation_efflux	0.63
PF00132	Hexapep	0.63
PF02617	ClpS	0.63
PF08240	ADH_N	0.63
PF07883	Cupin_2	0.63
PF01726	LexA_DNA_bind	0.63
PF14023	DUF4239	0.63
PF00296	Bac_luciferase	0.63
PF05930	Phage_AlpA	0.63
PF07536	HWE_HK	0.63
PF02586	SRAP	0.63
PF00596	Aldolase_II	0.63
PF01641	SelR	0.63
PF09917	DUF2147	0.63
PF13426	PAS_9	0.63
PF13432	TPR_16	0.63
PF13561	adh_short_C2	0.63
PF00196	GerE	0.63
PF00891	Methyltransf_2	0.63
PF00072	Response_reg	0.63

COG ID	Name	Functional Category	% Frequency in 159 Family Scaffolds
COG1044	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	Cell wall/membrane/envelope biogenesis [M]	1.89
COG1384	Lysyl-tRNA synthetase, class I	Translation, ribosomal structure and biogenesis [J]	1.26
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	0.63
COG0229	Peptide methionine sulfoxide reductase MsrB	Posttranslational modification, protein turnover, chaperones [O]	0.63
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	0.63
COG2127	ATP-dependent Clp protease adapter protein ClpS	Posttranslational modification, protein turnover, chaperones [O]	0.63
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.63
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.63
COG3311	DNA-binding transcriptional regulator AlpA	Transcription [K]	0.63
COG3920	Two-component sensor histidine kinase, HisKA and HATPase domains	Signal transduction mechanisms [T]	0.63
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	0.63
COG4251	Bacteriophytochrome (light-regulated signal transduction histidine kinase)	Signal transduction mechanisms [T]	0.63

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	79.87 %
Unclassified	root	N/A	20.13 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	79.87 %
Unclassified	root	N/A	20.13 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	79.87 %
Unclassified	root	N/A	20.13 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	74.84 %
Unclassified	root	N/A	20.13 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	72.96 %
Unclassified	root	N/A	20.13 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.63 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	69.81 %
Unclassified	root	N/A	20.13 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.63 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	67.92 %
Unclassified	root	N/A	20.13 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.63 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	60.38 %
Unclassified	root	N/A	20.13 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.13 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	6.29 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	2.52 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	1.89 %
Bradyrhizobium diazoefficiens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	1.26 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.63 %
Bradyrhizobium shewense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium shewense	0.63 %
Desulfobacula	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfobacula	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.13 %
Bradyrhizobium sp. MOS002	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. MOS002	2.52 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	2.52 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	1.89 %
Bradyrhizobium sp. G22	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. G22	1.26 %
Bradyrhizobium diazoefficiens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	1.26 %
Bradyrhizobium sp. WSM1253	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WSM1253	0.63 %
Bradyrhizobium sp. STM 3843	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	0.63 %
Bradyrhizobium sp. WSM2793	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WSM2793	0.63 %
Bradyrhizobium sp. 2S1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 2S1	0.63 %
Desulfobacula toluolica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfobacula → Desulfobacula toluolica	0.63 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.63 %
Bradyrhizobium shewense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium shewense	0.63 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2035918004\|FACENC_F56XM5W01BBBCR	Not Available	521	Open in IMG/M
2040502001\|FACENC_GAMC6GA01AUCQE	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	502	Open in IMG/M
2065487018\|GPINP_F5MS3JC02JC895	Not Available	509	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_13792768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	743	Open in IMG/M
3300000955\|JGI1027J12803_101912903	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	533	Open in IMG/M
3300000955\|JGI1027J12803_102310314	All Organisms → cellular organisms → Bacteria	872	Open in IMG/M
3300001977\|JGI24746J21847_1029798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	753	Open in IMG/M
3300001978\|JGI24747J21853_1050691	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	506	Open in IMG/M
3300001989\|JGI24739J22299_10185679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	611	Open in IMG/M
3300001990\|JGI24737J22298_10179711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	624	Open in IMG/M
3300001991\|JGI24743J22301_10059265	Not Available	787	Open in IMG/M
3300002239\|JGI24034J26672_10032435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	855	Open in IMG/M
3300003215\|JGI25153J46596_10005110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	6927	Open in IMG/M
3300004157\|Ga0062590_100282324	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1277	Open in IMG/M
3300004479\|Ga0062595_100721563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	805	Open in IMG/M
3300004625\|Ga0055543_1001633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	8552	Open in IMG/M
3300005093\|Ga0062594_103159963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	516	Open in IMG/M
3300005260\|Ga0074072_1060833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1070	Open in IMG/M
3300005288\|Ga0065714_10454064	Not Available	551	Open in IMG/M
3300005327\|Ga0070658_10519134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1030	Open in IMG/M
3300005330\|Ga0070690_101189106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	608	Open in IMG/M
3300005333\|Ga0070677_10755439	Not Available	552	Open in IMG/M
3300005335\|Ga0070666_10164638	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1551	Open in IMG/M
3300005338\|Ga0068868_100575495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	995	Open in IMG/M
3300005340\|Ga0070689_100891119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	787	Open in IMG/M
3300005341\|Ga0070691_10754019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	589	Open in IMG/M
3300005343\|Ga0070687_100701970	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	707	Open in IMG/M
3300005347\|Ga0070668_100464341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1091	Open in IMG/M
3300005347\|Ga0070668_101804149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	563	Open in IMG/M
3300005356\|Ga0070674_100273362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1336	Open in IMG/M
3300005356\|Ga0070674_100693491	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	870	Open in IMG/M
3300005356\|Ga0070674_100985976	Not Available	739	Open in IMG/M
3300005356\|Ga0070674_102224777	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	501	Open in IMG/M
3300005365\|Ga0070688_100635487	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300005366\|Ga0070659_101480788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	604	Open in IMG/M
3300005434\|Ga0070709_11129388	Not Available	628	Open in IMG/M
3300005439\|Ga0070711_101362987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	616	Open in IMG/M
3300005440\|Ga0070705_101811348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	518	Open in IMG/M
3300005441\|Ga0070700_100306172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1162	Open in IMG/M
3300005441\|Ga0070700_101084460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	663	Open in IMG/M
3300005441\|Ga0070700_101678801	Not Available	544	Open in IMG/M
3300005455\|Ga0070663_100011677	All Organisms → cellular organisms → Bacteria	5523	Open in IMG/M
3300005455\|Ga0070663_100036789	All Organisms → cellular organisms → Bacteria	3403	Open in IMG/M
3300005455\|Ga0070663_100234972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	1445	Open in IMG/M
3300005455\|Ga0070663_100263625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1367	Open in IMG/M
3300005455\|Ga0070663_100926304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	754	Open in IMG/M
3300005456\|Ga0070678_101466827	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	638	Open in IMG/M
3300005457\|Ga0070662_100538983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	977	Open in IMG/M
3300005457\|Ga0070662_100685814	Not Available	866	Open in IMG/M
3300005459\|Ga0068867_100945587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	778	Open in IMG/M
3300005615\|Ga0070702_100857592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	707	Open in IMG/M
3300005616\|Ga0068852_100461584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1259	Open in IMG/M
3300005840\|Ga0068870_10265800	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1069	Open in IMG/M
3300005844\|Ga0068862_100835897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	901	Open in IMG/M
3300005844\|Ga0068862_100868172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	885	Open in IMG/M
3300006038\|Ga0075365_10753240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	688	Open in IMG/M
3300006038\|Ga0075365_11271929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	517	Open in IMG/M
3300006042\|Ga0075368_10523119	All Organisms → cellular organisms → Bacteria → Proteobacteria	531	Open in IMG/M
3300006163\|Ga0070715_10367095	Not Available	791	Open in IMG/M
3300006173\|Ga0070716_101763783	Not Available	512	Open in IMG/M
3300006175\|Ga0070712_100016157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4818	Open in IMG/M
3300006175\|Ga0070712_101411462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	608	Open in IMG/M
3300006176\|Ga0070765_101629368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	607	Open in IMG/M
3300006177\|Ga0075362_10437736	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	663	Open in IMG/M
3300006177\|Ga0075362_10534951	Not Available	601	Open in IMG/M
3300006178\|Ga0075367_10647059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	672	Open in IMG/M
3300006195\|Ga0075366_10031350	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3128	Open in IMG/M
3300006237\|Ga0097621_100528794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. G22	1071	Open in IMG/M
3300006237\|Ga0097621_100763328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	894	Open in IMG/M
3300006237\|Ga0097621_102016419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WSM2793	551	Open in IMG/M
3300006237\|Ga0097621_102024666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	550	Open in IMG/M
3300006755\|Ga0079222_11519843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	629	Open in IMG/M
3300006844\|Ga0075428_101783663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	641	Open in IMG/M
3300006881\|Ga0068865_101002785	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	731	Open in IMG/M
3300006881\|Ga0068865_101107066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	698	Open in IMG/M
3300006881\|Ga0068865_101480338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	608	Open in IMG/M
3300007258\|Ga0099793_10156599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1081	Open in IMG/M
3300009011\|Ga0105251_10379504	Not Available	647	Open in IMG/M
3300009098\|Ga0105245_12683140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. MOS002	551	Open in IMG/M
3300009101\|Ga0105247_10043565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	2750	Open in IMG/M
3300009101\|Ga0105247_10085960	Not Available	1990	Open in IMG/M
3300009101\|Ga0105247_11038902	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	642	Open in IMG/M
3300009148\|Ga0105243_10357324	Not Available	1343	Open in IMG/M
3300009148\|Ga0105243_10367592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1326	Open in IMG/M
3300009148\|Ga0105243_12717686	Not Available	535	Open in IMG/M
3300009176\|Ga0105242_12024482	Not Available	618	Open in IMG/M
3300009176\|Ga0105242_12637490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	552	Open in IMG/M
3300009551\|Ga0105238_10597597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. MOS002	1111	Open in IMG/M
3300009551\|Ga0105238_11328347	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	745	Open in IMG/M
3300009789\|Ga0126307_10241838	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1451	Open in IMG/M
3300010371\|Ga0134125_12478425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	564	Open in IMG/M
3300010375\|Ga0105239_10224798	All Organisms → cellular organisms → Bacteria	2105	Open in IMG/M
3300010375\|Ga0105239_12802818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	569	Open in IMG/M
3300010399\|Ga0134127_10164987	All Organisms → cellular organisms → Bacteria	2027	Open in IMG/M
3300011119\|Ga0105246_11607390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	614	Open in IMG/M
3300012922\|Ga0137394_11399964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	560	Open in IMG/M
3300012923\|Ga0137359_10204081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1765	Open in IMG/M
3300012958\|Ga0164299_10502965	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfobacula → Desulfobacula toluolica	806	Open in IMG/M
3300012958\|Ga0164299_11150885	Not Available	583	Open in IMG/M
3300013297\|Ga0157378_10470611	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1250	Open in IMG/M
3300013306\|Ga0163162_10224334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. MOS002	2009	Open in IMG/M
3300013306\|Ga0163162_13437621	Not Available	505	Open in IMG/M
3300013308\|Ga0157375_13268645	Not Available	540	Open in IMG/M
3300014968\|Ga0157379_10937605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	823	Open in IMG/M
3300014969\|Ga0157376_10339382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	1434	Open in IMG/M
3300014969\|Ga0157376_10476454	Not Available	1222	Open in IMG/M
3300014969\|Ga0157376_12106930	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	602	Open in IMG/M
3300015077\|Ga0173483_10156800	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1010	Open in IMG/M
3300015371\|Ga0132258_13087227	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1152	Open in IMG/M
3300015371\|Ga0132258_13702223	Not Available	1043	Open in IMG/M
3300017792\|Ga0163161_10118525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1987	Open in IMG/M
3300017792\|Ga0163161_10259611	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1356	Open in IMG/M
3300018031\|Ga0184634_10199374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	911	Open in IMG/M
3300018067\|Ga0184611_1312215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	544	Open in IMG/M
3300018073\|Ga0184624_10193032	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300018432\|Ga0190275_11085206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	874	Open in IMG/M
3300018476\|Ga0190274_10122882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2125	Open in IMG/M
3300018476\|Ga0190274_10196218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1769	Open in IMG/M
3300020580\|Ga0210403_10037591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3869	Open in IMG/M
3300021168\|Ga0210406_10483905	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	981	Open in IMG/M
3300021432\|Ga0210384_10311080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1418	Open in IMG/M
3300025302\|Ga0207426_1045483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1335	Open in IMG/M
3300025898\|Ga0207692_10138108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1384	Open in IMG/M
3300025904\|Ga0207647_10176567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1242	Open in IMG/M
3300025908\|Ga0207643_10336056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium shewense	946	Open in IMG/M
3300025911\|Ga0207654_10316813	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1065	Open in IMG/M
3300025915\|Ga0207693_10180904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WSM1253	1659	Open in IMG/M
3300025920\|Ga0207649_10105640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1872	Open in IMG/M
3300025933\|Ga0207706_11237393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	619	Open in IMG/M
3300025934\|Ga0207686_11032864	Not Available	668	Open in IMG/M
3300025934\|Ga0207686_11074765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	655	Open in IMG/M
3300025935\|Ga0207709_11035681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	672	Open in IMG/M
3300025938\|Ga0207704_10976785	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	715	Open in IMG/M
3300025938\|Ga0207704_11233646	Not Available	638	Open in IMG/M
3300025940\|Ga0207691_10891150	Not Available	745	Open in IMG/M
3300025940\|Ga0207691_11146639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	646	Open in IMG/M
3300025941\|Ga0207711_11510980	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300025942\|Ga0207689_10070485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2872	Open in IMG/M
3300025944\|Ga0207661_10003105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	11495	Open in IMG/M
3300025972\|Ga0207668_10753352	Not Available	859	Open in IMG/M
3300025981\|Ga0207640_11452713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	615	Open in IMG/M
3300026023\|Ga0207677_11056703	Not Available	738	Open in IMG/M
3300026067\|Ga0207678_11457127	Not Available	605	Open in IMG/M
3300026089\|Ga0207648_10646275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	977	Open in IMG/M
3300026089\|Ga0207648_10687540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	947	Open in IMG/M
3300026118\|Ga0207675_100388120	Not Available	1374	Open in IMG/M
3300026118\|Ga0207675_102627417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	513	Open in IMG/M
3300026142\|Ga0207698_10230140	All Organisms → cellular organisms → Bacteria → Proteobacteria	1682	Open in IMG/M
3300028379\|Ga0268266_11732246	Not Available	600	Open in IMG/M
3300028381\|Ga0268264_11690931	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 2S1	643	Open in IMG/M
3300028786\|Ga0307517_10401045	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. G22	726	Open in IMG/M
3300028786\|Ga0307517_10544794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	581	Open in IMG/M
3300031058\|Ga0308189_10292440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	633	Open in IMG/M
3300031092\|Ga0308204_10133253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. MOS002	721	Open in IMG/M
3300031170\|Ga0307498_10050021	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1127	Open in IMG/M
3300031616\|Ga0307508_10454232	Not Available	874	Open in IMG/M
3300031715\|Ga0307476_11019188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	609	Open in IMG/M
3300032074\|Ga0308173_11130307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	731	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	66.04%
Environmental	Environmental	33.96%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	66.04%
Terrestrial	Environmental → Terrestrial	32.08%
Aquatic	Environmental → Aquatic	1.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	32.08%
Rhizosphere	Host-Associated → Plants → Rhizosphere	32.08%
Rhizoplane	Host-Associated → Plants → Rhizoplane	24.53%
Roots	Host-Associated → Plants → Roots	9.43%
Sediment	Environmental → Aquatic → Sediment	1.89%

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	21.38%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	19.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	16.98%
Soil	Host-Associated → Plants → Rhizosphere → Soil	15.09%
Loam	Environmental → Terrestrial → Soil → Loam	12.58%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	4.40%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.89%
Unclassified	Host-Associated → Plants → Roots → Unclassified	1.89%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.26%
Endophytes	Host-Associated → Plants → Roots → Endophytes	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	21.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	16.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	15.09%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.95%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.69%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	4.40%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.52%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.52%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.52%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.89%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	1.89%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.26%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.63%
Unclassified	Host-Associated → Plants → Roots → Endophytes → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	8.18%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	7.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	6.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.66%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	4.40%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	4.40%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.14%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.14%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.14%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.14%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.52%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.52%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.52%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	2.52%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.89%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.89%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	1.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.26%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.26%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.26%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.26%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.26%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.63%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.63%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.63%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.63%
Arabidopsis Root	Host-Associated → Plants → Roots → Endophytes → Unclassified → Arabidopsis Root	0.63%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.63%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2035918004	Soil microbial communities from sample at FACE Site 2 North Carolina CO2-	Environmental	Open in IMG/M
2040502001	Soil microbial communities from sample at FACE Site 2 North Carolina CO2+	Environmental	Open in IMG/M
2065487018	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001977	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5	Host-Associated	Open in IMG/M
3300001978	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6	Host-Associated	Open in IMG/M
3300001989	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5	Host-Associated	Open in IMG/M
3300001990	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3	Host-Associated	Open in IMG/M
3300001991	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2	Host-Associated	Open in IMG/M
3300002239	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2	Host-Associated	Open in IMG/M
3300003215	Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF	Host-Associated	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004625	Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2	Host-Associated	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005260	Microbial communities on the surface of kaolinite enhanced biochar from soil with fertiliser in Sydney, Australia	Environmental	Open in IMG/M
3300005288	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1	Host-Associated	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006042	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006177	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2	Host-Associated	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006195	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300025302	Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes)	Host-Associated	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028786	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM	Host-Associated	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031616	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM	Host-Associated	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FACENCA_2159100	2035918004	Soil	MPSAEQCRAYAAQYKMLAANPKNSARRKTVLTNISRSWTTLATQLENLALIDKSEGK
FACENCE_2365080	2040502001	Soil	MATVEQCRALAAEYKELATDPKNSARRSAVLKNISHSWAALAHQLESLAIIEKEGT
GPINP_00168750	2065487018	Soil	MPTVEANYKILGADPANSARRAAVLMSISRSWTALANQFDNLAIIVKSEG
ICChiseqgaiiFebDRAFT_137927681	3300000363	Soil	VGKAPVPTAEQCRAYAAEHKVLAAGPTNSARRSAVLKNISRSWAALANQLESLAVIEKSEGM*
JGI1027J12803_1019129032	3300000955	Soil	MPTVEQCRAYAAEHKILGADPANSARRSTVHRNISRSWTALAHQLESLALIVKSEEK*
JGI1027J12803_1023103142	3300000955	Soil	MPTIEQCRAYAAEYKILGGHPKNSARRSTVLNSISRSWTALANQIESLEGIEKSEGK*
JGI24746J21847_10297981	3300001977	Corn, Switchgrass And Miscanthus Rhizosphere	VEQCRAYAGNYKTLAGDPGNSARRSTVLMSISRSWTALGNQLQNLAFIVKEEG*
JGI24747J21853_10506912	3300001978	Corn, Switchgrass And Miscanthus Rhizosphere	MPTVEQCRAYAANYKMLATDPANSARRSSVLTSISRSWTALAHQFENLATIV
JGI24739J22299_101856791	3300001989	Corn Rhizosphere	MPSIEQCRAYAAENKILGAHPKNSARRSALLMNISRSWVALGHQLESLADIVKSEGK*
JGI24737J22298_101797111	3300001990	Corn Rhizosphere	YAANYKMLATDPANSARRSSVLXSISRSWTALAHQFENLATIVGSEG*
JGI24743J22301_100592651	3300001991	Corn, Switchgrass And Miscanthus Rhizosphere	MRTVEQCRAYAGNYKTLAGDPGNSARRSTVLMSISRSWTALGNQLQNLAFIV
JGI24034J26672_100324351	3300002239	Corn, Switchgrass And Miscanthus Rhizosphere	EQCRAYAGNYKTLAGDPGNSARRSTVLMSISRSWTALGNQLQNLAFIVKEEG*
JGI25153J46596_100051104	3300003215	Arabidopsis Rhizosphere	MPSIEQCRAYAAEYKMLGADPKNSARRSALLINISRSWIALGHQLESLADTVKSEGE*
Ga0062590_1002823243	3300004157	Soil	YAGNYKTLAGDPGNSARRSTVLMSISRSWTALGNQLQNLAFIVKEEG*
Ga0062595_1007215632	3300004479	Soil	MPSAEQCKAYAAHHKTLSAHPGNSARRSSLLMNISRSWAALANQLESLAIIEKSEG*
Ga0055543_10016331	3300004625	Arabidopsis Root	MPSAKQCRAFAAEYKKLAIDPNNSARRSSVLKSISNSWTALGHQLESLAMVAKEEQR*
Ga0062594_1031599631	3300005093	Soil	RAEDKMPSVEQCRAYAAEYKLLAKHAGNSARRSAVLMNISRSWTALANQHEILAVIVKSEGR*
Ga0074072_10608332	3300005260	Soil	MPTIDQCRTYAANCKNLAADQANSARRAAMLTNISRSWMALGNQLEKLALIVSEEG*
Ga0065714_104540641	3300005288	Miscanthus Rhizosphere	MRTVEQCRAYAGNYKTLAGDPGNSARRSTVLMSISRSWTALGNQLQNLAFIVKEEG*
Ga0070658_105191341	3300005327	Corn Rhizosphere	MPSAEQCKAYAAHHKTLSAHPGNSARRSSLLMNISRSWAARANQLESLAIIEKSEG*
Ga0070690_1011891061	3300005330	Switchgrass Rhizosphere	LGQRRPGGRDKMPSVEQCRAYAAEYKILGTNPRNSTRRTAVLRNISRSWAALANQLESLAVIVKSEGM*
Ga0070677_107554392	3300005333	Miscanthus Rhizosphere	MPSAEQCKAYAAHHKTLSAHPGNSACRSSLLMNISRSWAALANQLESLAIIEKSEG*
Ga0070666_101646383	3300005335	Switchgrass Rhizosphere	VTECAEGDNVPTAEQCRACAAEHKLGAADPGNSARRVTVLTNISRSWTALANQLESLAGIIKAEGI*
Ga0068868_1005754952	3300005338	Miscanthus Rhizosphere	MPTVEQCRAYAGNYKTLAGDPANSARRSTVLMSISRSWTALGNQLQNLA
Ga0070689_1008911193	3300005340	Switchgrass Rhizosphere	MPSVEQCRAYAAEFKFLGANPGNSARRSAVLTNISRSWAALPNQLDSLAVIEKSEGI*
Ga0070691_107540192	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	GRDEMPSVEQCRAYAAEYKLLRAHPRNSARRSAVLTNISRSWAALANQLESLAVIEKSEGM*
Ga0070687_1007019703	3300005343	Switchgrass Rhizosphere	RAYAAEHKILGANPRNAARRSTVLMNIPRSWTTLATQLEILATIANSEGK*
Ga0070668_1004643414	3300005347	Switchgrass Rhizosphere	MPSVEQCRAYAAEYKLLRAHPRNSARRSAVLTNISRSWAALANQLESLAVIEKSE
Ga0070668_1018041491	3300005347	Switchgrass Rhizosphere	CERSRMLPQTGLGQRRPGGRDKMPSVEQCRAYAAEYKILGTNPRNAARRTAVLRNISRSWAALANQLESLAVIVKSEGM*
Ga0070674_1002733623	3300005356	Miscanthus Rhizosphere	PTVEQCRSYAANYKILATDPTNSARRSAVLTGISRSWTALAHQFENLAAIVSSEG*
Ga0070674_1006934912	3300005356	Miscanthus Rhizosphere	MLPQTGLGQRRPGGRDKMPSVEQCRAFAAEYKILGTNPRNSARRTAVLRNISRSWAALANQLESLAVIVKSEGM*
Ga0070674_1009859762	3300005356	Miscanthus Rhizosphere	YAANYKTLGADPANSARRSAVLMSISRSWTALANQFDDLAIIVKSEG*
Ga0070674_1022247772	3300005356	Miscanthus Rhizosphere	MPTAEQCRAYAAHHKTLAADPKNSIVRTNVLTNISRSWTALAGQLESLASIVKSEGL*
Ga0070688_1006354871	3300005365	Switchgrass Rhizosphere	QMPTVEQCRAYAAEHKILGANPRNAARRSTVLMNIPRSWTTLATQLEILATIANSEGK*
Ga0070659_1014807881	3300005366	Corn Rhizosphere	EQCRAYAANYKTLGADPANSARGAAVLTGISRSWIALANQFDNLSIIVKSEG*
Ga0070709_111293882	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MPTVEQCRAYAANYKTLGADPANSARRSAVLMSISRSWTALANQFDDLAIIVKSEG*
Ga0070711_1013629871	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	PTVEQCRTYAANYKTLGDDPANSARRSAVLLSISRSWTALAHQFEDLAIIVSSEG*
Ga0070705_1018113481	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MLPQTGLGQRRPGGRDKMPSVEQCRAYAAEYKILGTNPRNSTRRTAVLRNTSRSWAALANQLESLAVIVKSEGM*
Ga0070700_1003061721	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	DMRANGGSARSPKMLSVEQCRAHAAKYKALAANPGNSARRSAVLANISRSWTALAHQFESLALIVKSEGG*
Ga0070700_1010844601	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MATAEQCRANAAEYKQLATDPSNSARRSAVLKSISRSWTALAHQLESLAIIEKGEIQGR
Ga0070700_1016788011	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	EDKMPSVEQCRAYAAEYKLLAKHAGNSARRSAVLMNISRSWTALANQHEILAVIVKSEGR
Ga0070663_1000116772	3300005455	Corn Rhizosphere	MPSVEQCRAYAAEYKLLAKHAGNSARRSAVLMNISRSWTALANQHEILAVIVKSEGR*
Ga0070663_1000367895	3300005455	Corn Rhizosphere	MPTVEQCRAYAAEHKILGANPRNAARRSTVLMNIPRSWTTLATQLEILATIANSEGK*
Ga0070663_1002349721	3300005455	Corn Rhizosphere	MPTVEQCRSYAANYKILATDPTNSARRSAVLTGISRSWTALAHQFENLA
Ga0070663_1002636252	3300005455	Corn Rhizosphere	MPTVEQCRAYAAEHKLLGADPRNSARLSSVLKNISHSWTALAHQLESLADIEKSETK*
Ga0070663_1009263043	3300005455	Corn Rhizosphere	MPSVEQCRAYAAEYKLLRAHPRNSARRSAVLTNISRSWAALANQLES
Ga0070678_1014668272	3300005456	Miscanthus Rhizosphere	MPSVEQCRAYAAENKILGAHPKNSARRSAVLMNISRSWVALGHQLESLADIVKS
Ga0070678_1021452521	3300005456	Miscanthus Rhizosphere	ANYKTLGADPANSARRSAVLMSISRSWTALANQFDDLAIIVKSEG*
Ga0070662_1005389832	3300005457	Corn Rhizosphere	VPTAEQCRSYAAEYKLRAADPRNSARRATVLTNISRSWAALGSQLENLAEIAKSEGK*
Ga0070662_1006858143	3300005457	Corn Rhizosphere	MPSVEQCRAYAAEYKLLGANRSNSARRSTVPMSISRSWTALAIQLESLTIIIKSEAI*
Ga0068867_1009455872	3300005459	Miscanthus Rhizosphere	MPTVEQCRAYAANYKTFAADPANSACRAAVLMGISRSWTALANQFDNLAVIVKSEG*
Ga0070702_1008575922	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MLPQTGLGQRRPGGRDKMPSVEQCRAYAAEYKILGTNPRNAARRTAVLRNISRSWAALANQLESLAVIVKSEGM*
Ga0068852_1004615843	3300005616	Corn Rhizosphere	MPTVEQCRSYAANYKILATDPTNSARRSAVLTGISRSWTALAHQFENLAAIVSSEG*
Ga0068870_102658001	3300005840	Miscanthus Rhizosphere	PIWSPPGRDKMPSAEQCKAYAAHHKTLSAHPGNSARRSSLLMNISRSWAALANQLESLAIIEKSEG*
Ga0068862_1008358971	3300005844	Switchgrass Rhizosphere	GSGQVLTVEQCRAYAANYKTLGADPANSARGAAVLTGISRSWIALANQFDNLSIIVKSEG
Ga0068862_1008681721	3300005844	Switchgrass Rhizosphere	MATAEQCRANAAEYKQLATDPSNSARRSAVLKSISRSWTALAHQLESLAIIEKGEIQGRSQ*
Ga0075365_107532402	3300006038	Populus Endosphere	MAAPRGAKMPSVEQCRAYAAKYKALGANPKNSARLSSVLMNISRSWTALAHQFESLAIIVKSDGE*
Ga0075365_112719291	3300006038	Populus Endosphere	MPTVEQCRAYAAKHKVLGADPKNSARRTAVLKNISHSWTALAHQLESLADIEKSEVGR*
Ga0075368_105231192	3300006042	Populus Endosphere	STEGILAPRGAKMPSVEQCRAYAAKYKALGANPKNSARLSSVLMNISRSWTALAHQFESLAIIVKSEGE*
Ga0070715_103670951	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MPTVEQCRAYAANYKTLGADPANSARRAAVLMSISRSWTALSYQFENLAIIVSSEG*
Ga0070716_1017637832	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MISVEQCRANAAKYKKLGADPTNSARRSSVLKSISRSWTALANQLENLALIEKSEGK*
Ga0070712_1000161572	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MQSNAANYKTLGADPANSARRAAVLMSISRSWTALSYQFENLAIIVSSEG*
Ga0070712_1014114622	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MATVEQCRALAAEYKELATDPKNSARRSAVLKNISHSWAALAHQLESLAIIEKEGT*
Ga0070765_1016293682	3300006176	Soil	MTAGPGPSIEECRALAAEYKKLASDANNSARRSSVLRNISNSWTALGSQLEALAVITKAEQ*
Ga0075362_104377361	3300006177	Populus Endosphere	VEQCRAYAANYKMLATDPANSARRSSVLTSISRSWTALAHQFENLATIVGSEG*
Ga0075362_105349512	3300006177	Populus Endosphere	GAKMPSVEQCRAYAAKYKALGADPKNSARMSSVLMNISRSWTALANQFESLAVIVKSDGE
Ga0075367_106470591	3300006178	Populus Endosphere	MPTVEQCKTYAAIHKLLSTHPKNSARRSAVLKNISRSWTALAKQLESLAVIDKLEG*
Ga0075366_100313505	3300006195	Populus Endosphere	MPTVEQCRAYAANYKMLATDPANSARRSSVLTSISRSWTALAHQFENLATIVGSEG*
Ga0097621_1005287941	3300006237	Miscanthus Rhizosphere	TAEQCRAYAAEYKLRAADPRNSPRRATVLTNISRSWAALGSQLENLAEIAKSEGK*
Ga0097621_1007633281	3300006237	Miscanthus Rhizosphere	MPTVEQCRAYAAEHKILGANPRNAARRSTVLMNIPRSWTTLATHLEILATIANSE
Ga0097621_1020164191	3300006237	Miscanthus Rhizosphere	VGQLGTADEGPQMPTAEQCRAYAAHHKILGADPNNSARQTSLHTNISRSWAALASQLESLAIVAKSEGM*
Ga0097621_1020246662	3300006237	Miscanthus Rhizosphere	MPSIEQCRAYAAENKILGADRRNSARRSTVLMNISRSWTALAHQLESLAVIAKSE
Ga0079222_115198431	3300006755	Agricultural Soil	MPTVEQCRAYAAEYKLLGTHPKNSARRSSVLKNISRSWTALAKQLESLEAIEKSEENRI
Ga0075428_1017836632	3300006844	Populus Rhizosphere	TVEQCRAYAANYKTLGADPANSARGAAVLTGISRSWIALANQFDNLSIIVKSEG*
Ga0068865_1010027852	3300006881	Miscanthus Rhizosphere	MPTAEQCRAYAAHHKMLAADPKNSIVRTNVLTNISRSWTALAGQLESLASIVKSEGL*
Ga0068865_1011070661	3300006881	Miscanthus Rhizosphere	RALMPTVEQCRAYAANYKTFAADPANSACRAAVLMGISRSWTALANQFDNLAVIVKSEG*
Ga0068865_1014803382	3300006881	Miscanthus Rhizosphere	RDKMPSVEQCRAYAAEYKILGTNPRNAARRTAVLRNISRSWAALANQLESLAVIVKSEGM
Ga0099793_101565991	3300007258	Vadose Zone Soil	MPTVEQCRAYAAEHRLLGVAPRNSARRSAVHKNISRSWTALAHQLESLAIIEKEGT*
Ga0105251_103795042	3300009011	Switchgrass Rhizosphere	MRTVEQCRAYAGNYKTLAGDPGNSARRSTVLMSISRSWTALGNQLQNL
Ga0105245_126831402	3300009098	Miscanthus Rhizosphere	GSGQVLTVEKCRAYAANYKTLGADPANSARRAAVQTSISRSWIALANQFDNLSIIVKSEG
Ga0105247_100435651	3300009101	Switchgrass Rhizosphere	MPTVEQCRTYAANYKTLGADPANSARRAAVLTSISRSWTALANQFDNLSIIVKSEG*
Ga0105247_100859605	3300009101	Switchgrass Rhizosphere	VLHAPAEPERRAMPTVEQCRAYAANYKTLAADPANSARRSAVLTNISRSWTALANQFDDLAIIVKSEG*
Ga0105247_110389022	3300009101	Switchgrass Rhizosphere	RAYAANYKTLGADPANSARRAAVLMGISRSWTALAHQFENLATIVGSEG*
Ga0105243_103573243	3300009148	Miscanthus Rhizosphere	MLPQTGLGQRRPGGRDKMPSVEQCRAYAAEYKILGTNPRNSARRTAVLRNISRSWAALANQLESLAVIVKSEGM*
Ga0105243_103675923	3300009148	Miscanthus Rhizosphere	MPTVEQCRAYAANYKTLGADPANSARRSAVLMSISRSWTALANQFDDLAIIVKSE
Ga0105243_127176862	3300009148	Miscanthus Rhizosphere	MPTVEQCRAYAANYKTLGADPANSARGAAVLTGISRSWIALANQFDNLSIIVKSEG*
Ga0105242_120244821	3300009176	Miscanthus Rhizosphere	MRAQGDNVPTAEQCRVYAADYKLRAADPKNSARRATVLTNISRSWTALASQLENLTEVEKSERV*
Ga0105242_126374901	3300009176	Miscanthus Rhizosphere	AYAANYKMLATDPANSARRSSVLTSISRSWTALAHQFENLATIVGSEG*
Ga0105238_105975974	3300009551	Corn Rhizosphere	VTECAEGDNVPTAEQCRAYAAEHKLGAADPGNSARRVTVLTNISRSWTALANQLESLAGIIEAEGI*
Ga0105238_113283471	3300009551	Corn Rhizosphere	EQCRAYAANYKMLATDPANSARRSSVLTSISRSWTALAHQFENLATIVGSEG*
Ga0126307_102418381	3300009789	Serpentine Soil	KMLSVEQCRAHAAEYKARAANPGNSARRSAVLANISRSWTALAHQFESLALIVKSEGG*
Ga0134125_124784252	3300010371	Terrestrial Soil	MLPQTGLGQRRPGGRDKMPSVEQCRAYAAEYKILGTNPRNSARRTAVLRNISRSWAALANQLESLAVIVKLEGM*
Ga0105239_102247982	3300010375	Corn Rhizosphere	MPSIEQCRAYAAENKILGAHPKNSARRSAVLMNISRSWVALGHQLESLADIVKSEGK*
Ga0105239_128028182	3300010375	Corn Rhizosphere	MPTVEQCRAYAANYKTFAADPANSACRAAVLMGISRSWTALANQFDNLAV
Ga0134127_101649871	3300010399	Terrestrial Soil	MPSVEQCRAYAAEYKLLRAHPRNSARRSAVLTNISRSWAALANQLESLAVIEKSEGM*
Ga0105246_116073902	3300011119	Miscanthus Rhizosphere	RTVEQCRTYAANYKTLADDPANSARRSTVLMSISRSWTALGNQLQNLAFIVKEEG*
Ga0137394_113999642	3300012922	Vadose Zone Soil	MPTVELCRAYAAEHKLLGADPRNSARRSAVHTNISRSWTALAHFFEGPATTEKEG
Ga0137359_102040814	3300012923	Vadose Zone Soil	MPTVEQCRAYAAEHKFLGAAPRNSARRSAVHKNISRSWTALAHQLESLAIIEKEGT*
Ga0164299_105029651	3300012958	Soil	MPSVEQCRAYAAEFKFLGANPGNSARRSAVLTNISRSWAALPNQLDSL
Ga0164299_111508852	3300012958	Soil	RAYAAEYKLLAKHAGNSARRSAVLMNISRSWTALANQHEILAVIVKSEGR*
Ga0157378_104706111	3300013297	Miscanthus Rhizosphere	KAQMPTVEQCRSYAANYKILATDPTNSARRSAVLTGISRSWTALAHQFENLAAIVSSEG*
Ga0163162_102243341	3300013306	Switchgrass Rhizosphere	TVEQCRAYAGNYKTLAGDPGNSARRSTVLMSISRSWTALGNQLQNLAFIVKEEG*
Ga0163162_134376212	3300013306	Switchgrass Rhizosphere	PAEGCNVPTVEQCRAYAANYKTLAADPLNSARRSAVLKNISQSWTALSHQLENLAAIVSSEG*
Ga0157375_132686451	3300013308	Miscanthus Rhizosphere	CRAYAAEHKLGAADPGNSARRVTVLTNISRSCTALANQLESLAGIIKAEGI*
Ga0157379_109376052	3300014968	Switchgrass Rhizosphere	MPSIEQCRAYAAEHKILGADPRNSARRSAVLKGISRSWIALAHQLENLAIIAKSEEG*
Ga0157376_103393823	3300014969	Miscanthus Rhizosphere	MRAQGDNVPTAEQCRVYAADYKLRAADPKNSARRATVLTTISRSWTALASQLENLTEVEKSERV*
Ga0157376_104764541	3300014969	Miscanthus Rhizosphere	VPTAEQCRAHAAEHKLGAADPVNSARRVTVLTNISRSWTALANQLESLAGIIKAEGI*
Ga0157376_121069302	3300014969	Miscanthus Rhizosphere	MPTVEQCRAYAANYKTFAADPANSACRAAVLMGISRSWTALANQFDDLAIIVKSEG*
Ga0173483_101568001	3300015077	Soil	MPSAEQCRAYAAEHKILAANPNNSARRSAVLNNISRSWAALASQLEILAGIVKSER*
Ga0132258_130872272	3300015371	Arabidopsis Rhizosphere	MPTVEQCRTYAANYKTLADDPANSTRRSAVLMSISLSWTALADQFDSLAIIVKSEG*
Ga0132258_137022232	3300015371	Arabidopsis Rhizosphere	MPSVEQCRAYAVEFKLLAANPGNSARRSAVLMNISRSWAALANQLESLAIIEKSERR*
Ga0163161_101185254	3300017792	Switchgrass Rhizosphere	MPTAEQCRAYAAHHKTLAADPKNSIVRTNVLTNISRSWIALAGQLESLASIVKSEGL
Ga0163161_102596113	3300017792	Switchgrass Rhizosphere	MPTVEQCRAYAAEHKILGANPRNAARRSTVLMNIPRSWTTLATQLEILATI
Ga0184634_101993742	3300018031	Groundwater Sediment	MAAPRGAYMLSAEQCRAYAAEYKALAANPRNSARRSAVLTNISRSWTALAHQLENLADIAKSEEG
Ga0184611_13122152	3300018067	Groundwater Sediment	MPTAEQCRAYAAHHKMLAADPKNSIVRTNVLTNISRSWTALAGQIESLASIAKSEGI
Ga0184624_101930321	3300018073	Groundwater Sediment	QCRAYAAEYKLLRAHPRNSARRSAVLTNISRSWAALANQLESLAVIEKSEGM
Ga0190275_110852062	3300018432	Soil	MPTIEQCRAYAAQHKMLGADPNILAPRKNVLTNISRSWAALANQLDILAAIAKSEGR
Ga0190274_101228823	3300018476	Soil	MPTVEQCQAYAAQHKVLAADPKNSARRKSVLINISHSWTALANQLESLAIIKKSEGM
Ga0190274_101962181	3300018476	Soil	FHSSQKAQMRTVEQCRAYAGNYKTLAGDPGNSARRSTVLMSISRSWTALGNQLQNLAFIVKEEG
Ga0210403_100375918	3300020580	Soil	MPTVEQCRAYAANYKTLGADPANSARRSAVLMGISRSWTALAHQFDNLAIIASAEG
Ga0210406_104839052	3300021168	Soil	MPTVEQCRAYAANYKTLADDPANSARRSAVLMGISRSWTALANQFDSLAIIVKSEG
Ga0210384_103110802	3300021432	Soil	GGGPQMPTVEQCRAYAANYKTLGADPANSARRSAVLMGISRSWTALAHQFDNLAIIASAE
Ga0207426_10454832	3300025302	Arabidopsis Rhizosphere	MPSAKQCRAFAAEYKKLAIDPNNSARRSSVLKSISNSWTALGHQLESLAMVAKEEQR
Ga0207692_101381084	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	ALMPTVEQCRAYAANYKTLGADPANSARRSAVLMSISRSWTALANQFDDLAIIVKSEG
Ga0207647_101765673	3300025904	Corn Rhizosphere	MPSIEQCRAYAAEYKILGAHPKNSARRSALLMNISRSWVALGHQLESLADIVKSEGK
Ga0207643_103360561	3300025908	Miscanthus Rhizosphere	VGVGFRGRPPEGDKMPSVEQCRAYAANYKTFAADPANSACRAAVLMGISRSWTALANQFDNLAVIVKSEG
Ga0207654_103168132	3300025911	Corn Rhizosphere	MPSIEQCRAYAAEYKILGADPKNSARLSTVLRNISRSWIALGHQLESLADIANSEGK
Ga0207693_101809044	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MPTVEQCRTYAANYKTLADDPANSARRSAVLMSISRSWTALANQFDDLAIIVKSEG
Ga0207649_101056402	3300025920	Corn Rhizosphere	MPTVEQCRAYAAEHKLLGADPRNSARLSSVLKNISHSWTALAHQLESLADIEKSETK
Ga0207706_112373932	3300025933	Corn Rhizosphere	QMPTVEQCRSYAANYKILATDPTNSARRSAVLTGISRSWTALAHQFENLAAIVSSEG
Ga0207686_110328642	3300025934	Miscanthus Rhizosphere	MRAQGDNVPTAEQCRVYAADYKLRAADPKNSARRATVLTNISRSWTALASQLENLTEVEKSERV
Ga0207686_110747651	3300025934	Miscanthus Rhizosphere	AYAANYKMLATDPANSARRSSVLTSISRSWTALAHQFENLATIVGSEG
Ga0207709_110356812	3300025935	Miscanthus Rhizosphere	MLPQTGLGQRRPGGRDKMPSVEQCRAYAAEYKILGTNPRNSARRTAVLRNISRSWAALANQLESLAVIVKSEGM
Ga0207704_109767851	3300025938	Miscanthus Rhizosphere	MPTAEQCRAYAAHHKMLAADPKNSIVRTNVLTNISRSWTALAGQLESLASIVKSEGL
Ga0207704_112336461	3300025938	Miscanthus Rhizosphere	MPTVEQCRAYAANYKTLGADPANSARRSAVLMSISPSWTALANQFDDLAIIVKSEG
Ga0207691_108911501	3300025940	Miscanthus Rhizosphere	MPSVEQCRAYAAEYKLLAKHAGNSARRSAVLMNISRSWTALANQHEILAVI
Ga0207691_111466391	3300025940	Miscanthus Rhizosphere	MPSVEQCRAYGAEHKILGADPRNSARRSTVLMNISRSWTTLAHQLENLAVIEKDEG
Ga0207711_115109802	3300025941	Switchgrass Rhizosphere	EQCKAYAAHHKTLSAHPGNSARRSSLLMNISRSWAALANQLESLAIIEKSEG
Ga0207689_100704854	3300025942	Miscanthus Rhizosphere	MPTVEQCRAYAAEHKILGANPRNAARRSTVLMNIPRSWTTLATQLEILATIANSEGK
Ga0207661_1000310512	3300025944	Corn Rhizosphere	MPSVERCIAYAAEYKILGKDPNNSARKSSVLANISHSWTALSHQLEQLTEIVKAEAK
Ga0207668_107533523	3300025972	Switchgrass Rhizosphere	MLPQTGLGQRRPGGRDKMPSVEQCRAYAAEYKILGTNPRNAARRTAVLRNISRSWAALANQLESLAVIVKSEGM
Ga0207640_114527132	3300025981	Corn Rhizosphere	MPTVEQCRAYAANYKMLATDPANSARRSSVLTSISRSWTALAHQFENLATIVGSEG
Ga0207677_110567032	3300026023	Miscanthus Rhizosphere	MPSVEQCRAYAAEYKLLAKHAGNSARRSAVLMNISRSWTALANQHEILAVIVKSEGR
Ga0207678_114571271	3300026067	Corn Rhizosphere	GWANEAPGDKMPSVEQCRAYAAEFKFLGANPGNSARRSAVLTNISRSWAALPNQLDSLAVIEKSEGI
Ga0207648_106462753	3300026089	Miscanthus Rhizosphere	SQSRSFHSSQKAQMPTVEQCRAYAGNYKTLAGDPGNSARRSTVLMSISRSWTALGNQLQNLAFIVKEEG
Ga0207648_106875402	3300026089	Miscanthus Rhizosphere	MPTVEQCRAYAANYKTFAADPANSACRAAVLMGISRSWTALANQFDNLAVIVKSEGK
Ga0207675_1003881205	3300026118	Switchgrass Rhizosphere	MLPQTGLGQRRPGGRDKMPSVEQCRAYAAEHKLLGADPKNSARRTAVLTNISRSWTALANQLESLAIIVKSEGM
Ga0207675_1026274172	3300026118	Switchgrass Rhizosphere	AYARQHKTLGVDPMNSARRSAVLMNISRSWTALASQLESLAIIVKSEG
Ga0207698_102301401	3300026142	Corn Rhizosphere	MPSAEQCKAYAAHHKTLSAHPGNSARRSSLLMNISRSWAALANQLESLAIIENRKVSNKS
Ga0268266_117322461	3300028379	Switchgrass Rhizosphere	MPTVEQCRTYAANYKTLADDPANSACRAAVLMSISLSWTALADQFENLAIIVKSEG
Ga0268264_116909311	3300028381	Switchgrass Rhizosphere	MPTVEQCRSYAANYKILATDPTNSARRSAVLTGISRSWTALAHQFENLAAIVSSEG
Ga0307517_104010451	3300028786	Ectomycorrhiza	TAEQCRAYAAEYKLRAADPRNSARRATVLTNISRSWAALGSQLENLAEIAKSEGK
Ga0307517_105447942	3300028786	Ectomycorrhiza	MPSIEQCRAYAAENKILGADRRNSARRSTVLMNISRSWTALAHQLESLAVIVKSEEG
Ga0308189_102924401	3300031058	Soil	MPSVEQCRAYAAEHKILGANPRNSARRSTVLMNISRSWTALAHQLENLADIAKSEEG
Ga0308204_101332531	3300031092	Soil	MPSVEQCRAYASEHKTLGANPRNSARRSAVLMNISRSWTALANQLESLAIIVKSEGK
Ga0307498_100500212	3300031170	Soil	MPSVEQCRAYAAERKILGANPRNSARRSTVLMNISRSWTALAHQLENLADIAKSEEG
Ga0307508_104542322	3300031616	Ectomycorrhiza	MPSVEQCRAYAAEFKILGAAQKNSTRRSAVLMNISRSWTALAHQLESLAVIVKSEGM
Ga0307476_110191881	3300031715	Hardwood Forest Soil	MPSVEQCRAYAAEYKSLGNDSRNSARRSAVLKSISHSWTALGHQLESLADIVKS
Ga0308173_111303071	3300032074	Soil	DIMPTAEECRAYAAHHKRLGANPKNSARRTTVLLSISKSWIALANQLDTLSIIVKHEGM

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F042047

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences