Metagenome / Metatranscriptome Family F041988

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F041988
Family Type	Metagenome / Metatranscriptome
Number of Sequences	159
Average Sequence Length	46 residues
Representative Sequence	VIGFPAHGAWRVVEKATAARDVPAGEPWIFSEHRTMAEVIAEETAAA
Number of Associated Samples	130
Number of Associated Scaffolds	159

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	20.69 %
% of genes near scaffold ends (potentially truncated)	71.07 %
% of genes from short scaffolds (< 2000 bps)	81.76 %
Associated GOLD sequencing projects	125
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (60.377 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (29.560 % of family members)
Environment Ontology (ENVO)	Unclassified (27.044 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.572 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 32.00% β-sheet: 0.00% Coil/Unstructured: 68.00%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 159 Family Scaffolds
PF14497	GST_C_3	3.14
PF00753	Lactamase_B	2.52
PF13561	adh_short_C2	1.89
PF12833	HTH_18	1.89
PF00106	adh_short	1.26
PF00496	SBP_bac_5	1.26
PF00486	Trans_reg_C	1.26
PF00083	Sugar_tr	1.26
PF13460	NAD_binding_10	0.63
PF01266	DAO	0.63
PF01551	Peptidase_M23	0.63
PF03869	Arc	0.63
PF01965	DJ-1_PfpI	0.63
PF13751	DDE_Tnp_1_6	0.63
PF12762	DDE_Tnp_IS1595	0.63
PF01872	RibD_C	0.63
PF02518	HATPase_c	0.63
PF03984	DUF346	0.63
PF13340	DUF4096	0.63
PF00202	Aminotran_3	0.63
PF03682	UPF0158	0.63
PF03150	CCP_MauG	0.63
PF00665	rve	0.63
PF05275	CopB	0.63
PF02771	Acyl-CoA_dh_N	0.63
PF03050	DDE_Tnp_IS66	0.63
PF00892	EamA	0.63
PF14330	DUF4387	0.63
PF05598	DUF772	0.63
PF00571	CBS	0.63
PF13610	DDE_Tnp_IS240	0.63
PF13426	PAS_9	0.63
PF04392	ABC_sub_bind	0.63
PF13191	AAA_16	0.63
PF00072	Response_reg	0.63

COG ID	Name	Functional Category	% Frequency in 159 Family Scaffolds
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.63
COG1858	Cytochrome c peroxidase	Posttranslational modification, protein turnover, chaperones [O]	0.63
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.63
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.63
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.63
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.63
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.63
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.63
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.63
COG3667	Uncharacterized conserved protein involved in copper resistance	Inorganic ion transport and metabolism [P]	0.63
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.63

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	60.38 %
Unclassified	root	N/A	39.62 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	60.38 %
Unclassified	root	N/A	39.62 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	60.38 %
Unclassified	root	N/A	39.62 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	49.06 %
Unclassified	root	N/A	39.62 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.63 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	40.88 %
Unclassified	root	N/A	39.62 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.62 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	28.30 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	4.40 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.63 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.63 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.62 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	22.01 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.40 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.63 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.63 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.63 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.62 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	20.75 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.40 %
Roseomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	0.63 %
Nitrobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter	0.63 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.63 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.63 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.62 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.40 %
Bradyrhizobium centrosematis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium centrosematis	1.26 %
Nitrobacter hamburgensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → Nitrobacter hamburgensis	0.63 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.63 %
Roseomonas terrae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas terrae	0.63 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.63 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.63 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.63 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.62 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.40 %
Bradyrhizobium centrosematis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium centrosematis	1.26 %
Bradyrhizobium sp. 200	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 200	0.63 %
Nitrobacter hamburgensis X14	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → Nitrobacter hamburgensis → Nitrobacter hamburgensis X14	0.63 %
Roseomonas terrae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas terrae	0.63 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.63 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.63 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.63 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.63 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004080\|Ga0062385_10600099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	696	Open in IMG/M
3300004080\|Ga0062385_10902796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	586	Open in IMG/M
3300004082\|Ga0062384_100241602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1090	Open in IMG/M
3300004091\|Ga0062387_100291407	Not Available	1046	Open in IMG/M
3300004152\|Ga0062386_100604878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	896	Open in IMG/M
3300004152\|Ga0062386_101005258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium centrosematis	691	Open in IMG/M
3300005333\|Ga0070677_10865836	Not Available	520	Open in IMG/M
3300005436\|Ga0070713_102342339	Not Available	517	Open in IMG/M
3300005446\|Ga0066686_10754049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	652	Open in IMG/M
3300005518\|Ga0070699_101950479	Not Available	537	Open in IMG/M
3300005536\|Ga0070697_100603899	All Organisms → cellular organisms → Bacteria	964	Open in IMG/M
3300005554\|Ga0066661_10656287	Not Available	618	Open in IMG/M
3300005559\|Ga0066700_10254345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1229	Open in IMG/M
3300005561\|Ga0066699_10929430	Not Available	605	Open in IMG/M
3300005764\|Ga0066903_102248945	Not Available	1052	Open in IMG/M
3300005764\|Ga0066903_104230353	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300005895\|Ga0075277_1001282	All Organisms → cellular organisms → Bacteria	2701	Open in IMG/M
3300006031\|Ga0066651_10828523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	503	Open in IMG/M
3300006172\|Ga0075018_10471800	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium centrosematis	650	Open in IMG/M
3300006176\|Ga0070765_100154705	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2048	Open in IMG/M
3300006797\|Ga0066659_10902844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	738	Open in IMG/M
3300006800\|Ga0066660_10368792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1173	Open in IMG/M
3300006852\|Ga0075433_11482728	Not Available	586	Open in IMG/M
3300006954\|Ga0079219_12123303	Not Available	538	Open in IMG/M
3300007255\|Ga0099791_10494666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	593	Open in IMG/M
3300007258\|Ga0099793_10242133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	870	Open in IMG/M
3300007258\|Ga0099793_10575694	Not Available	563	Open in IMG/M
3300007788\|Ga0099795_10215515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	815	Open in IMG/M
3300007788\|Ga0099795_10305830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas terrae	700	Open in IMG/M
3300009012\|Ga0066710_102049967	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	845	Open in IMG/M
3300009038\|Ga0099829_10220055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	1542	Open in IMG/M
3300009038\|Ga0099829_11627491	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	533	Open in IMG/M
3300009088\|Ga0099830_10934296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 200	718	Open in IMG/M
3300009088\|Ga0099830_11032292	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	681	Open in IMG/M
3300009089\|Ga0099828_10724193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	893	Open in IMG/M
3300009090\|Ga0099827_10698049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → Nitrobacter hamburgensis → Nitrobacter hamburgensis X14	877	Open in IMG/M
3300009143\|Ga0099792_10543741	Not Available	733	Open in IMG/M
3300009143\|Ga0099792_10817475	Not Available	611	Open in IMG/M
3300009143\|Ga0099792_10834518	Not Available	606	Open in IMG/M
3300009792\|Ga0126374_10321916	Not Available	1047	Open in IMG/M
3300010048\|Ga0126373_10301788	All Organisms → cellular organisms → Bacteria → Proteobacteria	1597	Open in IMG/M
3300010358\|Ga0126370_10279289	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	1312	Open in IMG/M
3300010358\|Ga0126370_11788217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	594	Open in IMG/M
3300010360\|Ga0126372_10414983	All Organisms → cellular organisms → Bacteria → Proteobacteria	1234	Open in IMG/M
3300010361\|Ga0126378_11565196	All Organisms → cellular organisms → Bacteria → Proteobacteria	748	Open in IMG/M
3300010362\|Ga0126377_13333972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	519	Open in IMG/M
3300010366\|Ga0126379_11488356	Not Available	783	Open in IMG/M
3300010376\|Ga0126381_101012710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1199	Open in IMG/M
3300010376\|Ga0126381_101752696	Not Available	897	Open in IMG/M
3300010376\|Ga0126381_102110753	Not Available	811	Open in IMG/M
3300010398\|Ga0126383_10339399	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1518	Open in IMG/M
3300010400\|Ga0134122_12061128	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300011269\|Ga0137392_10318799	Not Available	1286	Open in IMG/M
3300011270\|Ga0137391_10246304	All Organisms → cellular organisms → Bacteria	1550	Open in IMG/M
3300011271\|Ga0137393_10054725	All Organisms → cellular organisms → Bacteria → Proteobacteria	3134	Open in IMG/M
3300012189\|Ga0137388_10225110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1699	Open in IMG/M
3300012189\|Ga0137388_11353229	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300012202\|Ga0137363_10063462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2694	Open in IMG/M
3300012202\|Ga0137363_11343791	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	604	Open in IMG/M
3300012207\|Ga0137381_10272792	Not Available	1471	Open in IMG/M
3300012209\|Ga0137379_10079262	All Organisms → cellular organisms → Bacteria	3159	Open in IMG/M
3300012210\|Ga0137378_11494377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	587	Open in IMG/M
3300012211\|Ga0137377_11878352	Not Available	517	Open in IMG/M
3300012212\|Ga0150985_122017830	Not Available	567	Open in IMG/M
3300012212\|Ga0150985_122737930	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	593	Open in IMG/M
3300012359\|Ga0137385_10129947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2222	Open in IMG/M
3300012361\|Ga0137360_10886469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	769	Open in IMG/M
3300012362\|Ga0137361_11238685	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	669	Open in IMG/M
3300012363\|Ga0137390_10512564	All Organisms → cellular organisms → Bacteria	1173	Open in IMG/M
3300012363\|Ga0137390_11613208	Not Available	586	Open in IMG/M
3300012582\|Ga0137358_10359511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	986	Open in IMG/M
3300012683\|Ga0137398_10632298	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300012683\|Ga0137398_10741018	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300012918\|Ga0137396_10500089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	901	Open in IMG/M
3300012924\|Ga0137413_10524594	Not Available	875	Open in IMG/M
3300012929\|Ga0137404_10065750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	2828	Open in IMG/M
3300012944\|Ga0137410_10332199	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1211	Open in IMG/M
3300012944\|Ga0137410_10621402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	894	Open in IMG/M
3300012961\|Ga0164302_11950008	Not Available	501	Open in IMG/M
3300012987\|Ga0164307_10461323	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	951	Open in IMG/M
3300012989\|Ga0164305_11950789	Not Available	534	Open in IMG/M
3300013770\|Ga0120123_1170719	Not Available	521	Open in IMG/M
3300015373\|Ga0132257_102859963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	629	Open in IMG/M
3300016270\|Ga0182036_11762471	Not Available	524	Open in IMG/M
3300016341\|Ga0182035_11713607	Not Available	568	Open in IMG/M
3300016387\|Ga0182040_11264172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	622	Open in IMG/M
3300016404\|Ga0182037_10291762	All Organisms → cellular organisms → Bacteria	1307	Open in IMG/M
3300016445\|Ga0182038_11491893	Not Available	607	Open in IMG/M
3300017955\|Ga0187817_10856556	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300017995\|Ga0187816_10228000	All Organisms → cellular organisms → Bacteria → Proteobacteria	812	Open in IMG/M
3300018468\|Ga0066662_11558354	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	689	Open in IMG/M
3300020199\|Ga0179592_10415347	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	586	Open in IMG/M
3300020579\|Ga0210407_10004092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	11597	Open in IMG/M
3300020579\|Ga0210407_10258128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1358	Open in IMG/M
3300020579\|Ga0210407_10354223	All Organisms → cellular organisms → Bacteria → Proteobacteria	1148	Open in IMG/M
3300020579\|Ga0210407_11187586	Not Available	575	Open in IMG/M
3300020581\|Ga0210399_11446403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	535	Open in IMG/M
3300020583\|Ga0210401_11331674	Not Available	576	Open in IMG/M
3300021086\|Ga0179596_10648947	Not Available	535	Open in IMG/M
3300021168\|Ga0210406_10383687	All Organisms → cellular organisms → Bacteria → Proteobacteria	1128	Open in IMG/M
3300021170\|Ga0210400_11393865	Not Available	559	Open in IMG/M
3300021181\|Ga0210388_11300842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	614	Open in IMG/M
3300021374\|Ga0213881_10192400	Not Available	900	Open in IMG/M
3300021401\|Ga0210393_10563372	All Organisms → cellular organisms → Bacteria → Proteobacteria	931	Open in IMG/M
3300021404\|Ga0210389_10638612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	836	Open in IMG/M
3300021406\|Ga0210386_11385065	Not Available	590	Open in IMG/M
3300021476\|Ga0187846_10000480	All Organisms → cellular organisms → Bacteria → Proteobacteria	23388	Open in IMG/M
3300021478\|Ga0210402_10936269	Not Available	793	Open in IMG/M
3300021560\|Ga0126371_12155176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	672	Open in IMG/M
3300021560\|Ga0126371_12172659	Not Available	669	Open in IMG/M
3300022533\|Ga0242662_10165605	Not Available	677	Open in IMG/M
3300022557\|Ga0212123_10587551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	705	Open in IMG/M
3300024347\|Ga0179591_1134271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3028	Open in IMG/M
3300026331\|Ga0209267_1319568	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300026340\|Ga0257162_1045028	Not Available	556	Open in IMG/M
3300026369\|Ga0257152_1029061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	595	Open in IMG/M
3300026498\|Ga0257156_1141034	Not Available	502	Open in IMG/M
3300026547\|Ga0209156_10311254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	708	Open in IMG/M
3300027104\|Ga0208095_1017240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	521	Open in IMG/M
3300027684\|Ga0209626_1005674	All Organisms → cellular organisms → Bacteria → Proteobacteria	2789	Open in IMG/M
3300027727\|Ga0209328_10254478	Not Available	524	Open in IMG/M
3300027884\|Ga0209275_10406640	Not Available	768	Open in IMG/M
3300027907\|Ga0207428_10366989	All Organisms → cellular organisms → Bacteria → Proteobacteria	1058	Open in IMG/M
3300028536\|Ga0137415_10467865	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1067	Open in IMG/M
3300031640\|Ga0318555_10299007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	871	Open in IMG/M
3300031679\|Ga0318561_10352519	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300031680\|Ga0318574_10083628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1745	Open in IMG/M
3300031708\|Ga0310686_102457914	All Organisms → cellular organisms → Bacteria	4775	Open in IMG/M
3300031724\|Ga0318500_10420490	Not Available	666	Open in IMG/M
3300031736\|Ga0318501_10061837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1786	Open in IMG/M
3300031744\|Ga0306918_10509812	Not Available	942	Open in IMG/M
3300031751\|Ga0318494_10559870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	668	Open in IMG/M
3300031753\|Ga0307477_10159549	All Organisms → cellular organisms → Bacteria → Proteobacteria	1572	Open in IMG/M
3300031778\|Ga0318498_10116994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1212	Open in IMG/M
3300031846\|Ga0318512_10051144	Not Available	1844	Open in IMG/M
3300031910\|Ga0306923_10127700	All Organisms → cellular organisms → Bacteria	2891	Open in IMG/M
3300031910\|Ga0306923_10788428	Not Available	1050	Open in IMG/M
3300031942\|Ga0310916_10067651	All Organisms → cellular organisms → Bacteria → Proteobacteria	2784	Open in IMG/M
3300031954\|Ga0306926_10572150	All Organisms → cellular organisms → Bacteria	1382	Open in IMG/M
3300032001\|Ga0306922_10377778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1519	Open in IMG/M
3300032060\|Ga0318505_10408678	Not Available	642	Open in IMG/M
3300032063\|Ga0318504_10224443	Not Available	881	Open in IMG/M
3300032064\|Ga0318510_10475562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	539	Open in IMG/M
3300032076\|Ga0306924_10221455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2173	Open in IMG/M
3300032261\|Ga0306920_102255377	Not Available	755	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.23%
Host-Associated	Host-Associated	3.77%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.31%
Aquatic	Environmental → Aquatic	6.92%
Plants	Host-Associated → Plants	3.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.05%
Freshwater	Environmental → Aquatic → Freshwater	5.03%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.89%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.26%
Sediment	Environmental → Aquatic → Sediment	0.63%
Cave	Environmental → Terrestrial → Cave	0.63%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.50%
Loam	Environmental → Terrestrial → Soil → Loam	6.92%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.89%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.63%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.63%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.63%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.63%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	43.40%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	28.93%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.03%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.89%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.26%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.63%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.63%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.63%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.63%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.63%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	29.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.13%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.18%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.66%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.52%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.89%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.26%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.26%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.26%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.26%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.26%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.26%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.26%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.63%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.63%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.63%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.63%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.63%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.63%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.63%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.63%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005895	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_101	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013770	Permafrost microbial communities from Nunavut, Canada - A15_5cm_18M	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026340	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-A	Environmental	Open in IMG/M
3300026369	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-05-A	Environmental	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300027104	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF024 (SPAdes)	Environmental	Open in IMG/M
3300027173	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF036 (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062385_106000991	3300004080	Bog Forest Soil	MIGFPAHGVRRQVETATAAREVPVGQSWAFRDHRTMAEII
Ga0062385_109027962	3300004080	Bog Forest Soil	VIGFPAHGPWRRVEAATAARDVPPGQSWAFTDHRTMAEVLDDETA*
Ga0062384_1002416022	3300004082	Bog Forest Soil	GFPAHGAWRVVEKATAARDVPPGQSWAFRDHRTMAQAIIDEKTATA*
Ga0062387_1002914072	3300004091	Bog Forest Soil	MIGFPAHGVRRQVETATAAREVPVGQSWAFRDHRTMAEIIAAEAQAA*
Ga0062386_1006048781	3300004152	Bog Forest Soil	GFPAHGAWRQVEAATAARDVPVGESWAFRNHRTMAKVIVDEAAA*
Ga0062386_1010052582	3300004152	Bog Forest Soil	VVIGFPAHGAWRLVDAAMAARDVPTRESSAFQRHRTMAQVIAEEAT*
Ga0070677_108658361	3300005333	Miscanthus Rhizosphere	RDAVIAFPAHGAWRMAEMATAARDVPVGESWAFREHRTMAEIIAEEKTATA*
Ga0070713_1023423392	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	ACARIRDAVIGFPAHGAWRKVETAMAARDVPAGKSWAFRDHRTLAEVDAGETTAA*
Ga0066686_107540492	3300005446	Soil	VIGFPAHGAWQKVEKAIAAPWIFRDHRTMAEVIADEATAA*
Ga0070699_1019504791	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MIGFPAHVTWRQAEAAVAARDVPAGESWPLREHRTMAEIIAEETAAA
Ga0070697_1006038993	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	FPAHGAWRQVEAAMAARDVPAGESWAFQEHRTMAEVLAEDTATA*
Ga0066661_106562873	3300005554	Soil	REAVIGFPAHGPWRVVEKAIAARDVPLGKSWAFREHRTMAEVIAGEKSLTA*
Ga0066700_102543451	3300005559	Soil	WQKVEKAIAARDVPPGEPWIFPEHRTMAEVIADEATAA*
Ga0066699_109294302	3300005561	Soil	AEKREAVIGFPAHGPWRMVENAIAARDVPVGQSWAFREHRTMAQIIAEQKTVTA*
Ga0066903_1022489451	3300005764	Tropical Forest Soil	IGFPAHGAWRRVEAATAARDLAAGESWAFRSHRTMAEVIAEEATTA*
Ga0066903_1042303532	3300005764	Tropical Forest Soil	GFPAHGAWRQVEAATAARDASAGASWVFPDHRTMAEVIAEAATVA*
Ga0075277_10012824	3300005895	Rice Paddy Soil	VIGFPAHGGWHVVEQATAARDVPAGERWSFPGHRTMEAVIDDEKAA*
Ga0066651_108285231	3300006031	Soil	RDAVIGFPAHGAWQKVEKATAARDVPPGEPWIFRDHRTMAEVIAEETAAA*
Ga0075018_104718001	3300006172	Watersheds	ACARVRDVVIGFPAHGAWRLVEAAMAAKEVPAGQSWVFRDHRTMAEVIAEEAA*
Ga0070765_1001547053	3300006176	Soil	VIGFPAHGPWRMVEKATAARDVPLGQSWAFREHRTMAQVIAEEKSVTA*
Ga0066659_109028442	3300006797	Soil	AWQKVEKATAARDVPLDEPWIFRDHRTMAEVIADEATAA*
Ga0066660_103687922	3300006800	Soil	VIGFPAHGPWRMVEKAIAARDVPAGESWAFREYRTMAEVIAQEKSLTA*
Ga0075433_114827282	3300006852	Populus Rhizosphere	VIGFPAHDAWRHIEAAAAARDVALGKPWIFREHRTMAEVIAGEATAA*
Ga0073928_100094789	3300006893	Iron-Sulfur Acid Spring	CRACAKPRNAIIGFPAHGGWRVVESATAARDVPARESWVFPHRNMAEVMTDETQPAAD*
Ga0079219_121233031	3300006954	Agricultural Soil	LVRDAVIGFPAHGAWRQVEAAIAARDVPAGESWIFENHRTMAEVIVEEAAA*
Ga0099791_104946663	3300007255	Vadose Zone Soil	EAAMAARDVPAGESWAFPEHRTMAEVLAYEATAA*
Ga0099793_102421331	3300007258	Vadose Zone Soil	RRNRFPGAWQKVEKAIAARDVPPGEPWVFRDHRTMAEVIADEATAA*
Ga0099793_105756941	3300007258	Vadose Zone Soil	EAVIGFPAHGAWRMAEKATAARDVAVGQNWAFREHRTMAEVIAQEKPLTA*
Ga0099795_102155152	3300007788	Vadose Zone Soil	QVEAATAARDVAVGEPWTFSEHRTLAEVLAEETATA*
Ga0099795_103058301	3300007788	Vadose Zone Soil	ARVRDGVIGFPAHGAWRQVEAATAARDVAVGEAWTFPEHRTMAQVIATEVPAA*
Ga0066710_1020499672	3300009012	Grasslands Soil	VIGFPAHGAWQKVEEATTARDVPPGEPWIFRDHRTMAEVIADEATAA
Ga0099829_102200551	3300009038	Vadose Zone Soil	PAHGAWRQGEAAVAARDVAVGEPWAFREHRTMAEVIAEETATA*
Ga0099829_116274912	3300009038	Vadose Zone Soil	HGAWRVVEKATAARDVPAGEPWIFSEHRTMADVIADETAAA*
Ga0099830_109342962	3300009088	Vadose Zone Soil	HGAWRQVEAATAARDVAVGEAWTFPEHRTMEEVLAEETAAA*
Ga0099830_110322921	3300009088	Vadose Zone Soil	HVRDAVIGFPAHGAWQKVEKATAARDVPPGEPWIFPDHRTMAEVIADETAAA*
Ga0099828_107241932	3300009089	Vadose Zone Soil	RDAVIGFPAHGAWQKVEKATAARDVPPGEPWIFRDHRTMAEVIADEATAA*
Ga0099827_106980491	3300009090	Vadose Zone Soil	AHGAWRVVERATAARDVAPGESWAFHDHRTMAEAIANEKTATA*
Ga0099792_105437412	3300009143	Vadose Zone Soil	VIGFPAHGAWQKVEKATAARDVPPGEPWIFPNHRTMAEVIADEATAA*
Ga0099792_108174752	3300009143	Vadose Zone Soil	AHVRDAVIGFPAHGAWQKVEKAIAARDVPPGEPWIFPEHRTMAEVIAEKATAA*
Ga0099792_108345181	3300009143	Vadose Zone Soil	CAYVRDAVIGFPAHGAWRQVEAAMAARDFPAGESWAFQEHRNMAEVLSEETAAA*
Ga0126374_103219162	3300009792	Tropical Forest Soil	SCARHRKAIIGFPAHGGWRVVEKATAARDVRPGEPLTFPDHRSMAQVIVEEEAA*
Ga0126373_103017884	3300010048	Tropical Forest Soil	MRDAVIGFPAHGAWRQVEAATAARDVAAREPWIFPEHRTMAQVIADEAV*
Ga0126370_102792891	3300010358	Tropical Forest Soil	PADGARRQVETATAARDVAIGEGGTFSEDRTMAEVMASETVAA*
Ga0126370_117882171	3300010358	Tropical Forest Soil	AHGGWRVVEKATAARDVRPGEPWTFPDHRSMAQVIAEEEAA*
Ga0126372_104149833	3300010360	Tropical Forest Soil	HGGWRVVEKATAAREVRPGEPWTFPDHRSMAQVIADEATAGADRAADLA*
Ga0126378_115651961	3300010361	Tropical Forest Soil	RDAVIGFPAHGAWRQVEAATAARDVAAREPWIFPEHRTMAQVIADEAV*
Ga0126377_133339722	3300010362	Tropical Forest Soil	GWRVVEKATAARDVRPGEPWTFPDHRTMASVIAAEAIAA*
Ga0126379_114883562	3300010366	Tropical Forest Soil	MRDAAIGFPAHGAWRQVETATAARDVAIGERWTFSEHRTMAEVIASETVAA*
Ga0126381_1010127102	3300010376	Tropical Forest Soil	HGGWRVVEKATAARDVRPGEPWTFPDHRTMAQVIAEEEAA*
Ga0126381_1017526961	3300010376	Tropical Forest Soil	VIGFPAHGAWRKVENAMAARDVAVGESWAFRDHRTVAEVIAEEAT*
Ga0126381_1021107533	3300010376	Tropical Forest Soil	GFPAHGAWRQVETATAARDVAIGERWTFSEHRTMAEVIASETVAA*
Ga0126383_103393993	3300010398	Tropical Forest Soil	GFPAHGGWRVVEKATAARDVRPGEPWTFPDHRSMAQVIADEATAGADRAA*
Ga0134122_120611282	3300010400	Terrestrial Soil	RPMAPGGKAATAARDVAIGERWIFPDHRTMAEVIAEGTAAA*
Ga0137392_103187994	3300011269	Vadose Zone Soil	IGFPAHGAWQKVEKAIAARDVPPGEPWVFPDHRTMAEVIADEATAA*
Ga0137391_102463041	3300011270	Vadose Zone Soil	HGAWRQVEAATAARDVAVGEPWIFPEHRTMAEVIAEKATAA*
Ga0137393_100547253	3300011271	Vadose Zone Soil	VIGFPAHGAWQKGEKATAARDVPPGETRTFRDHRTMAEVIADDTAAA*
Ga0137388_102251103	3300012189	Vadose Zone Soil	AWQKVEKATAARDVPPGEPWIFPDHRTMAEVIAAEATAA*
Ga0137388_113532291	3300012189	Vadose Zone Soil	AWRQVEAAMTARDVPAGESWKFHDHRTMAQVIGDKAA*
Ga0137363_100634623	3300012202	Vadose Zone Soil	VIGFPAHGAWQKVEKATAARDVPLDEPWIFRDHRTMAEVIADEATAA*
Ga0137363_113437912	3300012202	Vadose Zone Soil	RDAVIGFPAHGAWRVVERATAARDVAVAEPWAFPEHRTMAEVIAEEATAA*
Ga0137381_102727921	3300012207	Vadose Zone Soil	VIGFPAHGAWRQVEVATAARDVAVGEPWTFSEHRTLAEVLAKETATA*
Ga0137379_100792624	3300012209	Vadose Zone Soil	MIGFSAHGAWRQVEAAIAARDVAVGEARTFPEHRTMAEVIAEKATAA*
Ga0137378_114943771	3300012210	Vadose Zone Soil	VIGFPAHGAWQKVEKAIAARDVLPGEPWTFPDHRTMAEVIAEEIAAA*
Ga0137377_118783521	3300012211	Vadose Zone Soil	EAVIGFPAHGRWRMVEKATAARDVPIGESWAFRGHRTMAEVIADKKSLTA*
Ga0150985_1220178302	3300012212	Avena Fatua Rhizosphere	RMVERAIAARDVAVGECWAFREHRTMAQVIAEEKSVTA*
Ga0150985_1227379302	3300012212	Avena Fatua Rhizosphere	VIAFPAHGAWRLAEKATAARDVPAGDSWAFREHRTMAEIIAKRSPQQ
Ga0137385_101299475	3300012359	Vadose Zone Soil	AHSAWRQVEAATAARDVAVGEPWAFREHRTMAEVLVEETATA*
Ga0137360_108864693	3300012361	Vadose Zone Soil	PAHGAWQKVEKATAARDVPPGEPWIFPDHRTMAEVIADEATAA*
Ga0137361_112386853	3300012362	Vadose Zone Soil	RDAVIGFPAHGAWQKVEKATAARDVPPGEPWVFRDHRTMAEIIADEATAA*
Ga0137390_105125643	3300012363	Vadose Zone Soil	FPAHGGWRRVEAATAARDVAVREPWTFPEHRTMAEVIAGEATAA*
Ga0137390_107764913	3300012363	Vadose Zone Soil	EKATAARDVPPGEPWIFPDHRTMAEVIADEATAA*
Ga0137390_116132082	3300012363	Vadose Zone Soil	IGFPAHGAWRVVEKATAAHDVPPGESWAFHDHRTMAEVIADEKSVTA*
Ga0137390_117069821	3300012363	Vadose Zone Soil	QKVEKAVAARDVPSGEPWIFPDHRTMAEVIADEAIAA*
Ga0137358_103595112	3300012582	Vadose Zone Soil	VIGFPAHGAWRVVEKATAARDVPAGEPWIFSEHRTMAEVIAEETAAA*
Ga0137398_106322982	3300012683	Vadose Zone Soil	CAQVRNAVIGFPAHGAWRQVEAAIAARDVAAREPWTFAEHRTMAQVIAGEAA*
Ga0137398_107410182	3300012683	Vadose Zone Soil	GFPAHGAWRQVEAATAARDVAAGESWVFHDHRTMAQVIGDEAA*
Ga0137396_105000891	3300012918	Vadose Zone Soil	GWLREGEKGIAAREVRPGVPWIVPNHRTMAEVNADEATAA*
Ga0137359_106049723	3300012923	Vadose Zone Soil	VEKATAARDVPAGEPWIFPEHRTMAEVIAEEATAA*
Ga0137413_105245943	3300012924	Vadose Zone Soil	ACAEPREAVIGFPAHGPWRMVEKSIAARDIPVGESWAFREHRTMAEIIAQEKY*
Ga0137404_100657502	3300012929	Vadose Zone Soil	LKVDTRRMAQKIEKAIAARDVAPGEPWIFSEHRTMAEVIAEETAAA*
Ga0137410_100872281	3300012944	Vadose Zone Soil	WRQVEAAIAARDVPAGESWAFREHRTMADVITEEPTAG*
Ga0137410_103321992	3300012944	Vadose Zone Soil	VIGFPAHGAWQKVEKAIAARDVPPGEPWIFPNHRTMAEVIADEATAA*
Ga0137410_106214023	3300012944	Vadose Zone Soil	VIGFPAHGAWQKVEKAIAARDVPPSEPWIFPEHRTMAEVIADEATAA*
Ga0164300_108860491	3300012951	Soil	RVEAAMAARDVPAGESWAFRDHRTMSEVIAEEAA*
Ga0164298_112338681	3300012955	Soil	VEAAMAARDVPAGESWAFPEHRTMAEVLAEETATA*
Ga0164302_119500081	3300012961	Soil	WQKVEKAITARDVLVGESWVFPEYRTMAEVLAEERATA*
Ga0164307_104613232	3300012987	Soil	VIAFPAHGAWRLAEKATAARDVPAGESWAFREHRTMAEVIAEEKTTTA*
Ga0164305_119507891	3300012989	Soil	AHGAWRQVEAAMAAPDVPAGESWVFPEHRTMAEVIAEETTAA*
Ga0120123_11707192	3300013770	Permafrost	RGAIIGFPAHGAWRVVEKATAARDVPLGQSWAFHDHRTMAQVIADEKSV*
Ga0132257_1028599632	3300015373	Arabidopsis Rhizosphere	VIAFPAHGAWRLAEKANAARDVPAGESWTFREHRTMAEIIAEEKTTTA*
Ga0182036_117624711	3300016270	Soil	CAGVRDAVIGFPAHGAWRQVEAATASRDVAVGEPWIFREHRTMAEVLAGEATAA
Ga0182033_106121292	3300016319	Soil	DRDAIFGFPAHGTWRQVEVATAARDVAVGEPWTFSERTMVEVIVEEMAAA
Ga0182035_117136071	3300016341	Soil	FPAHGGWRVVEKATAARDVRPGEPWTFPDHRTLGEVIAEEEAA
Ga0182040_112641721	3300016387	Soil	AVIGFPAHGNWPQVEAAMAARDVPAGESWAFREHRTMAEVSAEEATAA
Ga0182037_102917623	3300016404	Soil	IGFPAHGAWRQVEAATAARDIAVGESWAFTSHRSMAEVIAEEATAA
Ga0182038_114918931	3300016445	Soil	IGFPAHGGWRVVEKATAARDVDPGEPWTFSHRSMAEIIAEEEAA
Ga0187817_108565561	3300017955	Freshwater Sediment	AVIGFPAHGAWRRVEAATAARDVSVGTSWAFREHSTMAQVIAAETQAA
Ga0187816_102280001	3300017995	Freshwater Sediment	PREAVIGFPAHGAWRRVEKATAARDVPVGQSWAFHDHRTMAEVIAAEAQAA
Ga0066662_115583541	3300018468	Grasslands Soil	VIGFPAHGSWQKVEKATAARDVAVGEPWIFRDHRTMAEVIADEATAA
Ga0179592_104153471	3300020199	Vadose Zone Soil	VRNAVIGFPAHGAWQKVEKAIAARDVPPGEPWIFPNHRTMAEVIADEATAA
Ga0210407_1000409211	3300020579	Soil	VIGFPAHGAWQKVEKATAARDVPPGEPWIFSDHRTMAEVIAEEATAA
Ga0210407_102581282	3300020579	Soil	VIGFPAHGAWRVVEKATAARDVRPGGSWAFSEHRTMAEIIAEETAA
Ga0210407_103542231	3300020579	Soil	VRAPWVRDVVIGFPAHGAWRLVEAAMAAKEVPAGQSWVFRDHRTMAEVIAAEAG
Ga0210407_111875861	3300020579	Soil	AEPRDAVIGFPAHGPWRMVEKAVAARDVAVGQSWAFREHRTMAEVIAQEKSPTA
Ga0210399_114464032	3300020581	Soil	GACARVRDAVIGFPAHGAWQKVEKAIAARDVPPGEPWIFRDHRPMAEVIADEATAA
Ga0210401_108684352	3300020583	Soil	QLEAATAARDIAVGAPWTFSEHRTMAQVIAEEVTAA
Ga0210401_113316742	3300020583	Soil	ARMRDAVIGFPAHGAWSQVEAAMAARDVPAGESWVFPEHRTMAEVIAEETIAA
Ga0179596_106489471	3300021086	Vadose Zone Soil	VIGFPAHGAWRQVEAAMAARDVPAGESWAFQDHRTMAEVLAEDTATA
Ga0210406_103836871	3300021168	Soil	VIGFPDHGAWQKVEKATAARDVPAGEPWVFRDHRTMAEVIAGEATAA
Ga0210400_113938652	3300021170	Soil	RDAVIGFPAHGAWRRVEAAIAARDVPAGESWACRDHRTMAEVVADKTLAA
Ga0210400_116301191	3300021170	Soil	WRQVEAAMAARDVPAGESWAFQEHRNMAEVIADETAVA
Ga0210408_103749053	3300021178	Soil	MALGGRSKAAMTARDVPAGESWAFREHRTMAEVIAEEPAAA
Ga0210388_113008421	3300021181	Soil	VIGFPEHGAWQKVEKATAARDVPPGEPWIFSDHRTMAEVIAEEATAA
Ga0213881_101924002	3300021374	Exposed Rock	VIGFPAHGAWRQVEAAMAARDVPAGESWVFSGHRTMAEVIGEKAA
Ga0210393_105633721	3300021401	Soil	CARVRDVVIGFPAHGAWRLVEAAMAAREVPAGQSWVFRDHRTMAEVIAAEAG
Ga0210389_106386121	3300021404	Soil	VIGFPAHGAWRQVEAAIAARDVPPGERWVFRDHRTMAEVIADEATAA
Ga0210386_113850651	3300021406	Soil	VIGFPAHGAWRQVEAAIAARDVPPGERWVFRDHRTMAEVIADEATVA
Ga0187846_1000048012	3300021476	Biofilm	VIGFPAHGAWRQVDVATAARDVAVGESWAFTTHRLMAEVIADESTAV
Ga0210402_109362691	3300021478	Soil	CAEPRDAVIGFPAHGPWRMVEKATAARDVPLGQSWAFREHRTMAQVIAEEKSVTA
Ga0126371_106542741	3300021560	Tropical Forest Soil	QVEAATAARDVRAGNSWAFREHRTMAEVIAEETIAA
Ga0126371_121551761	3300021560	Tropical Forest Soil	CARHRQAIIGFPAHGGWRVVEKATAARDVRPGEPWTFPDHRSMAQVIAEEEAA
Ga0126371_121726592	3300021560	Tropical Forest Soil	VKRVARVLGIVQAIIGFPARGGWRVVEKATAARDVRPGEPWTFPHRSMAEVIAEEEAA
Ga0242662_101656052	3300022533	Soil	VWRQVEAAMAAREVPAGQSWAFQDHRTMAEVIAEETAAA
Ga0212123_105875511	3300022557	Iron-Sulfur Acid Spring	NAIIGFPAHGGWRVVESATAARDVPAGESWVFPHRNMAKVMADETQPAAA
Ga0179591_11342715	3300024347	Vadose Zone Soil	IGFPAHGAWQKVEKATTARNVPPGEPWVFRDHRTMAEVIAYEATAA
Ga0209267_13195682	3300026331	Soil	VIGFPAHGAWQKVEKAIAARDVPPGEPWVFRDHRTMAEVIADEATAA
Ga0257162_10450281	3300026340	Soil	PAHGAWRQVEAAMAARDVPAGESWAFPEHRTMAEVLAEDTATA
Ga0257152_10290612	3300026369	Soil	AWQKVEKAIAARDVPPGEPWIFPNHRTMAEVIADEATAA
Ga0257156_11410341	3300026498	Soil	CAHARDAVIGFPAHGAWQKVEKATAARDVPPGELWTFPEHRNMAEVIAGETVAA
Ga0209156_103112542	3300026547	Soil	VIGFPAHGAWQKVEKATAARDVAPGEPWTFLDHRTMAEVIAEEASAA
Ga0208095_10172401	3300027104	Forest Soil	RLRPRTGCRDGFPAHGAWQKVEKATAARDVPPGEPWIFSDHRTMAEVIAEEATAA
Ga0208097_10004481	3300027173	Forest Soil	RSEAATAARDVPAGESWVFPEHRTMAQVIAEEVTAA
Ga0209626_10056741	3300027684	Forest Soil	GRACAEPREAVIGFPAHGPWRMVEKATAARDVAPGESWAFHDHRTMAEVIADETAVA
Ga0209328_102544781	3300027727	Forest Soil	VIGFPAHGAWRQVEAATAARDVAVGEPWTFPEHRTMEEILAEETAAA
Ga0209275_104066401	3300027884	Soil	WRQVEAAMAARDVPAGESWGFHDHRTMAEVIAEGTVAA
Ga0209488_100951593	3300027903	Vadose Zone Soil	VEKAIAAGDVPPGEPWIFPNHRTTAEVIAYEATAA
Ga0207428_103669891	3300027907	Populus Rhizosphere	TQSRDAVIAFPAHGAWRLAEKATAARDVPLGDSWAFREHRTMAEIIAEEKTTTA
Ga0137415_104678652	3300028536	Vadose Zone Soil	VIGFPAHGAWQKVEKATAARDVPLDEPWIFRDHRTMAEVIADEATAA
Ga0318555_102990072	3300031640	Soil	RHRKAIIGFPAHSGWRVVEKATAARDVQSGEPWTFPDHRTLGEVIAEEVA
Ga0318561_103525192	3300031679	Soil	VIGFPAHGAWRQVEAATAARDVAVGESWAFTNHRSMAEVIAEETAAA
Ga0318574_100836282	3300031680	Soil	IIGFPAHSGWRVVEKATAARDVQSGEPWTFPDHRTLGEVIAEEVA
Ga0310686_1024579148	3300031708	Soil	VIGFPAHGAWRQVEAATAARDVAMGESWAFRDHRTMAEVIAQEVVAA
Ga0318500_104204901	3300031724	Soil	AWRQVEAATAARDVAIGESWAFTSHRSMAEVIAEEATAE
Ga0318501_100618372	3300031736	Soil	CEACGSCARHRKAIIGFPEHGGWRVVEKATAARDVRPGEPWTFPDHRTLGEVIAEEVA
Ga0306918_105098121	3300031744	Soil	MPRARLVGPCARVRDAVIGFPAHGAWRKVETAIAARDVPAGTSWAFRDHRTMA
Ga0318494_105598702	3300031751	Soil	AIIGFPAHSGWRVVEKATAARDVQSGEPWTFPDHRTLGEVIAEEVA
Ga0307477_101595491	3300031753	Hardwood Forest Soil	HGAWRQVEAAMAARDVPAAESWAFRDHRTMAEVVAEEAA
Ga0318498_101169941	3300031778	Soil	GFPAHSGWRVVEKATAARDVQSGEPWTFPDHRTLGEVIAEEVA
Ga0318512_100511442	3300031846	Soil	ARVRDAVIGFPAHGAWRKVETAIAARDVPAGTSWAFRDHRTMAEVIAEEAA
Ga0306923_101277001	3300031910	Soil	HGAWRKVETAIAARDVPAGTSWAFRDHRTMAEVIAEEAA
Ga0306923_107884283	3300031910	Soil	CARARDAVIGFPAHDAWQKVEKAIAARDVPPGEPWTFRAHRTMAEVIAAEATAA
Ga0310916_100676511	3300031942	Soil	AVIGFPAHGAWRQVEAATAARDIAVGESWAFTSHRSMAEVIAEEATAA
Ga0306926_105721501	3300031954	Soil	AWRQVEAATAARDVAAGEPWIFRDHRTMAEVIAEQTAGA
Ga0306922_103777783	3300032001	Soil	ARDAVIGFPAHDAWQKVEKAIAARDVPPGEPWTFRAHRTMAEVIAAEATAA
Ga0318505_104086781	3300032060	Soil	VRDAVIGFPAHGAWRQVEAATAARDVAIGESWAFTSHRSMAEVIAEEATAE
Ga0318504_102244432	3300032063	Soil	VRDAVIGFPAHGAWRQVEAATAARDVAVGESWAFTNHRSMAEVIAEETAAA
Ga0318510_104755621	3300032064	Soil	CAACAKACGAVIGFPAHGAWRVAEKATAARDVPAGGPRTFPEHRTMAEVIAE
Ga0306924_102214553	3300032076	Soil	ACARVRDAVIGFPAHGAWRRVEAAMAARDVPAGESWAFREHRTMAEVLVAGTATV
Ga0306920_1022553771	3300032261	Soil	IGFPAHGAWRRVETAMAARDVPAGESWAFREHRTMAEVLVAGTATV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F041988

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences