Metagenome Family F041966

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F041966
Family Type	Metagenome
Number of Sequences	159
Average Sequence Length	51 residues
Representative Sequence	MESTAAEKRKALRKMLAEPTCHIAPSCNDGIQARLVEWLGFPLVHISGSGQH
Number of Associated Samples	137
Number of Associated Scaffolds	159

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	96.23 %
% of genes near scaffold ends (potentially truncated)	98.74 %
% of genes from short scaffolds (< 2000 bps)	89.31 %
Associated GOLD sequencing projects	133
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (84.277 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (8.805 % of family members)
Environment Ontology (ENVO)	Unclassified (30.818 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (30.818 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 35.00% β-sheet: 0.00% Coil/Unstructured: 65.00%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 159 Family Scaffolds
PF00596	Aldolase_II	56.60
PF00528	BPD_transp_1	3.14
PF13416	SBP_bac_8	3.14
PF01494	FAD_binding_3	2.52
PF12891	Glyco_hydro_44	1.26
PF02515	CoA_transf_3	0.63
PF06472	ABC_membrane_2	0.63
PF01370	Epimerase	0.63
PF13378	MR_MLE_C	0.63
PF08530	PepX_C	0.63
PF13688	Reprolysin_5	0.63
PF01977	UbiD	0.63
PF01548	DEDD_Tnp_IS110	0.63
PF09338	Gly_reductase	0.63
PF02129	Peptidase_S15	0.63
PF00012	HSP70	0.63
PF02371	Transposase_20	0.63
PF00041	fn3	0.63
PF09084	NMT1	0.63
PF03401	TctC	0.63

COG ID	Name	Functional Category	% Frequency in 159 Family Scaffolds
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	5.03
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	2.52
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	2.52
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	2.52
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.26
COG0043	3-polyprenyl-4-hydroxybenzoate decarboxylase	Coenzyme transport and metabolism [H]	0.63
COG0443	Molecular chaperone DnaK (HSP70)	Posttranslational modification, protein turnover, chaperones [O]	0.63
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.63
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	0.63
COG2936	Predicted acyl esterase	General function prediction only [R]	0.63
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.63
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.63

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	84.28 %
Unclassified	root	N/A	15.72 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	84.28 %
Unclassified	root	N/A	15.72 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.28 %
Unclassified	root	N/A	15.72 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	31.45 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	23.90 %
Unclassified	root	N/A	15.72 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.63 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	28.30 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	22.64 %
Unclassified	root	N/A	15.72 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.26 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.63 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	28.30 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	22.64 %
Unclassified	root	N/A	15.72 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.26 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.63 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	27.04 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	22.64 %
Unclassified	root	N/A	15.72 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.26 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.63 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	27.04 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	22.64 %
Unclassified	root	N/A	15.72 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.26 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.63 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003999\|Ga0055469_10053676	Not Available	1064	Open in IMG/M
3300004009\|Ga0055437_10144117	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300004011\|Ga0055460_10052570	All Organisms → cellular organisms → Bacteria → Proteobacteria	1052	Open in IMG/M
3300004047\|Ga0055499_10011994	All Organisms → cellular organisms → Bacteria → Proteobacteria	1031	Open in IMG/M
3300004052\|Ga0055490_10288709	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	511	Open in IMG/M
3300004114\|Ga0062593_100674642	All Organisms → cellular organisms → Bacteria	1002	Open in IMG/M
3300004156\|Ga0062589_101875382	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300004156\|Ga0062589_102384620	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300004268\|Ga0066398_10158454	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	573	Open in IMG/M
3300004463\|Ga0063356_104947546	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300004463\|Ga0063356_105646278	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300005093\|Ga0062594_103192142	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300005176\|Ga0066679_10906326	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300005332\|Ga0066388_105909331	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300005341\|Ga0070691_10063699	All Organisms → cellular organisms → Bacteria	1777	Open in IMG/M
3300005353\|Ga0070669_100913740	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300005467\|Ga0070706_101983867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	527	Open in IMG/M
3300005544\|Ga0070686_101896221	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300005549\|Ga0070704_101185294	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300005549\|Ga0070704_102261402	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300005554\|Ga0066661_10199415	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1238	Open in IMG/M
3300005558\|Ga0066698_11050084	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300005614\|Ga0068856_101908250	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300005719\|Ga0068861_100189557	All Organisms → cellular organisms → Bacteria	1718	Open in IMG/M
3300005764\|Ga0066903_107997843	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	542	Open in IMG/M
3300005829\|Ga0074479_10373838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	674	Open in IMG/M
3300005834\|Ga0068851_10344717	All Organisms → cellular organisms → Bacteria	865	Open in IMG/M
3300005836\|Ga0074470_10945020	All Organisms → cellular organisms → Bacteria → Proteobacteria	6039	Open in IMG/M
3300005879\|Ga0075295_1019911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	781	Open in IMG/M
3300005887\|Ga0075292_1008706	All Organisms → cellular organisms → Bacteria	1257	Open in IMG/M
3300005937\|Ga0081455_10164025	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1700	Open in IMG/M
3300006049\|Ga0075417_10669777	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	531	Open in IMG/M
3300006173\|Ga0070716_100552110	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300006844\|Ga0075428_100069874	All Organisms → cellular organisms → Bacteria	3839	Open in IMG/M
3300006844\|Ga0075428_102668122	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	509	Open in IMG/M
3300006853\|Ga0075420_100661626	Not Available	901	Open in IMG/M
3300006854\|Ga0075425_100552297	All Organisms → cellular organisms → Bacteria	1326	Open in IMG/M
3300006854\|Ga0075425_102177972	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300006881\|Ga0068865_100214854	All Organisms → cellular organisms → Bacteria	1500	Open in IMG/M
3300006904\|Ga0075424_100979595	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	902	Open in IMG/M
3300006904\|Ga0075424_102486133	Not Available	543	Open in IMG/M
3300006918\|Ga0079216_10075719	All Organisms → cellular organisms → Bacteria	1552	Open in IMG/M
3300006918\|Ga0079216_12014310	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	501	Open in IMG/M
3300007076\|Ga0075435_101457617	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300009078\|Ga0105106_10909112	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	626	Open in IMG/M
3300009093\|Ga0105240_10310212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1802	Open in IMG/M
3300009094\|Ga0111539_11104667	Not Available	921	Open in IMG/M
3300009094\|Ga0111539_13174037	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	530	Open in IMG/M
3300009162\|Ga0075423_12508368	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	563	Open in IMG/M
3300009176\|Ga0105242_12674719	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	548	Open in IMG/M
3300009609\|Ga0105347_1358247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	623	Open in IMG/M
3300009792\|Ga0126374_10946509	All Organisms → cellular organisms → Bacteria → Proteobacteria	671	Open in IMG/M
3300009810\|Ga0105088_1070729	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	614	Open in IMG/M
3300009820\|Ga0105085_1064451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	678	Open in IMG/M
3300010043\|Ga0126380_11873517	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	545	Open in IMG/M
3300010358\|Ga0126370_12265822	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	537	Open in IMG/M
3300010359\|Ga0126376_10296206	All Organisms → cellular organisms → Bacteria	1404	Open in IMG/M
3300010359\|Ga0126376_11816132	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	647	Open in IMG/M
3300010361\|Ga0126378_10098127	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2885	Open in IMG/M
3300010362\|Ga0126377_11453217	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	759	Open in IMG/M
3300010362\|Ga0126377_11728793	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	701	Open in IMG/M
3300010396\|Ga0134126_11185789	Not Available	849	Open in IMG/M
3300010398\|Ga0126383_11332075	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	808	Open in IMG/M
3300010403\|Ga0134123_12897377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	548	Open in IMG/M
3300010403\|Ga0134123_13196048	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	527	Open in IMG/M
3300011409\|Ga0137323_1034005	Not Available	1125	Open in IMG/M
3300011424\|Ga0137439_1107283	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	619	Open in IMG/M
3300011430\|Ga0137423_1093705	Not Available	894	Open in IMG/M
3300011434\|Ga0137464_1025145	All Organisms → cellular organisms → Bacteria	1603	Open in IMG/M
3300011435\|Ga0137426_1007324	All Organisms → cellular organisms → Bacteria	2497	Open in IMG/M
3300011437\|Ga0137429_1048837	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1236	Open in IMG/M
3300011445\|Ga0137427_10338406	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	632	Open in IMG/M
3300012207\|Ga0137381_10978617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	730	Open in IMG/M
3300012227\|Ga0137449_1140831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	529	Open in IMG/M
3300012357\|Ga0137384_10103692	All Organisms → cellular organisms → Bacteria	2374	Open in IMG/M
3300012486\|Ga0157331_1000622	All Organisms → cellular organisms → Bacteria	1434	Open in IMG/M
3300012486\|Ga0157331_1017746	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	604	Open in IMG/M
3300012501\|Ga0157351_1010964	Not Available	832	Open in IMG/M
3300012511\|Ga0157332_1093612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	503	Open in IMG/M
3300012514\|Ga0157330_1074858	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	531	Open in IMG/M
3300012922\|Ga0137394_10360116	All Organisms → cellular organisms → Bacteria	1242	Open in IMG/M
3300012922\|Ga0137394_11344112	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	576	Open in IMG/M
3300012923\|Ga0137359_10048877	All Organisms → cellular organisms → Bacteria → Proteobacteria	3677	Open in IMG/M
3300012931\|Ga0153915_13453916	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300012944\|Ga0137410_11787123	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	542	Open in IMG/M
3300012948\|Ga0126375_11324898	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	606	Open in IMG/M
3300012971\|Ga0126369_10039663	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3944	Open in IMG/M
3300012971\|Ga0126369_10312697	All Organisms → cellular organisms → Bacteria	1577	Open in IMG/M
3300012971\|Ga0126369_12206207	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	638	Open in IMG/M
3300012985\|Ga0164308_10618380	Not Available	924	Open in IMG/M
3300013307\|Ga0157372_10135540	Not Available	2835	Open in IMG/M
3300014272\|Ga0075327_1144604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	738	Open in IMG/M
3300014300\|Ga0075321_1015330	Not Available	1132	Open in IMG/M
3300014302\|Ga0075310_1002466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3264	Open in IMG/M
3300014319\|Ga0075348_1094973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	743	Open in IMG/M
3300014879\|Ga0180062_1082879	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	717	Open in IMG/M
3300014880\|Ga0180082_1166379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	512	Open in IMG/M
3300014882\|Ga0180069_1080771	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	758	Open in IMG/M
3300014883\|Ga0180086_1081269	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	809	Open in IMG/M
3300016404\|Ga0182037_11644793	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	572	Open in IMG/M
3300017936\|Ga0187821_10022883	All Organisms → cellular organisms → Bacteria	2186	Open in IMG/M
3300018000\|Ga0184604_10001246	All Organisms → cellular organisms → Bacteria	3528	Open in IMG/M
3300018000\|Ga0184604_10244161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	627	Open in IMG/M
3300018031\|Ga0184634_10430396	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	598	Open in IMG/M
3300018054\|Ga0184621_10325303	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	541	Open in IMG/M
3300018056\|Ga0184623_10346272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	666	Open in IMG/M
3300018056\|Ga0184623_10409378	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	595	Open in IMG/M
3300018074\|Ga0184640_10192793	Not Available	919	Open in IMG/M
3300018078\|Ga0184612_10476915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	615	Open in IMG/M
3300018079\|Ga0184627_10048079	All Organisms → cellular organisms → Bacteria	2199	Open in IMG/M
3300018422\|Ga0190265_12128191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	665	Open in IMG/M
3300018433\|Ga0066667_11363384	Not Available	621	Open in IMG/M
3300018920\|Ga0190273_10798666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	748	Open in IMG/M
3300019377\|Ga0190264_11857754	Not Available	545	Open in IMG/M
3300019881\|Ga0193707_1023024	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2057	Open in IMG/M
3300021063\|Ga0206227_1021623	Not Available	1062	Open in IMG/M
3300022534\|Ga0224452_1130544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	773	Open in IMG/M
3300025324\|Ga0209640_10122164	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2237	Open in IMG/M
3300025324\|Ga0209640_11319928	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	533	Open in IMG/M
3300025791\|Ga0210115_1036310	All Organisms → cellular organisms → Bacteria	1075	Open in IMG/M
3300025918\|Ga0207662_10232655	Not Available	1204	Open in IMG/M
3300025937\|Ga0207669_10757547	Not Available	802	Open in IMG/M
3300025939\|Ga0207665_10294845	All Organisms → cellular organisms → Bacteria	1210	Open in IMG/M
3300026536\|Ga0209058_1145579	Not Available	1125	Open in IMG/M
3300027395\|Ga0209996_1057976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	593	Open in IMG/M
3300027647\|Ga0214468_1187708	Not Available	515	Open in IMG/M
3300027722\|Ga0209819_10127352	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	891	Open in IMG/M
3300027819\|Ga0209514_10355072	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300027873\|Ga0209814_10510056	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	533	Open in IMG/M
3300027886\|Ga0209486_10986489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	565	Open in IMG/M
3300027907\|Ga0207428_10955915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	603	Open in IMG/M
3300027961\|Ga0209853_1119072	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	658	Open in IMG/M
3300028145\|Ga0247663_1007361	All Organisms → cellular organisms → Bacteria	1478	Open in IMG/M
3300028802\|Ga0307503_10949491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	501	Open in IMG/M
3300028884\|Ga0307308_10606144	Not Available	525	Open in IMG/M
3300030006\|Ga0299907_10331980	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1235	Open in IMG/M
3300031226\|Ga0307497_10547868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	578	Open in IMG/M
3300031228\|Ga0299914_11156975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	622	Open in IMG/M
3300031548\|Ga0307408_100056755	Not Available	2840	Open in IMG/M
3300031548\|Ga0307408_100122524	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2016	Open in IMG/M
3300031548\|Ga0307408_101698820	Not Available	601	Open in IMG/M
3300031562\|Ga0310886_10644616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	654	Open in IMG/M
3300031754\|Ga0307475_10814739	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300031852\|Ga0307410_12128142	Not Available	502	Open in IMG/M
3300031890\|Ga0306925_11262428	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	736	Open in IMG/M
3300031908\|Ga0310900_11595488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	552	Open in IMG/M
3300031944\|Ga0310884_10883017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	551	Open in IMG/M
3300031949\|Ga0214473_12172722	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	536	Open in IMG/M
3300031965\|Ga0326597_11251621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	729	Open in IMG/M
3300032829\|Ga0335070_10061241	All Organisms → cellular organisms → Bacteria	4086	Open in IMG/M
3300033289\|Ga0310914_11232872	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	650	Open in IMG/M
3300033407\|Ga0214472_10467349	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1175	Open in IMG/M
3300033407\|Ga0214472_10500471	All Organisms → cellular organisms → Bacteria	1128	Open in IMG/M
3300033413\|Ga0316603_11020188	Not Available	782	Open in IMG/M
3300033481\|Ga0316600_10415833	Not Available	924	Open in IMG/M
3300033813\|Ga0364928_0040945	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	996	Open in IMG/M
3300034148\|Ga0364927_0215349	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	569	Open in IMG/M
3300034149\|Ga0364929_0025217	All Organisms → cellular organisms → Bacteria	1737	Open in IMG/M
3300034149\|Ga0364929_0053060	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1232	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	80.50%
Host-Associated	Host-Associated	19.50%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	57.86%
Aquatic	Environmental → Aquatic	22.64%
Plants	Host-Associated → Plants	19.50%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	54.72%
Sediment	Environmental → Aquatic → Sediment	15.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.47%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.03%
Marine	Environmental → Aquatic → Marine	3.77%
Freshwater	Environmental → Aquatic → Freshwater	3.14%
Floodplain	Environmental → Terrestrial → Floodplain	2.52%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	38.99%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	15.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.21%
Loam	Environmental → Terrestrial → Soil → Loam	8.18%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.66%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.03%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.77%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	2.52%
Sand	Environmental → Terrestrial → Soil → Sand	1.89%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.26%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.26%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.26%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.63%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.27%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	15.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.21%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.66%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.03%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.40%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.77%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.14%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.14%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	3.14%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	2.52%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.89%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.89%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.26%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	1.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.26%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.63%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.63%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.63%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	8.18%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.18%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.80%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.80%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.66%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.77%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	3.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.52%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.52%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	2.52%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.52%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.89%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.89%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.89%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.89%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.26%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	1.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.26%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.26%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.26%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	1.26%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.26%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.63%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.63%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.63%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.63%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.63%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.63%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.63%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	0.63%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.63%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003999	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2	Environmental	Open in IMG/M
3300004009	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D2	Environmental	Open in IMG/M
3300004011	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqA_D2	Environmental	Open in IMG/M
3300004047	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqC_D1	Environmental	Open in IMG/M
3300004052	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005829	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBC	Environmental	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300005879	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_301	Environmental	Open in IMG/M
3300005887	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_403	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009810	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30	Environmental	Open in IMG/M
3300009820	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_50_60	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011409	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT423_2	Environmental	Open in IMG/M
3300011424	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT200_2	Environmental	Open in IMG/M
3300011430	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT600_2	Environmental	Open in IMG/M
3300011434	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT814_2	Environmental	Open in IMG/M
3300011435	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT660_2	Environmental	Open in IMG/M
3300011437	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT736_2	Environmental	Open in IMG/M
3300011445	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012227	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT436_2	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012486	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.120510	Environmental	Open in IMG/M
3300012501	Unplanted soil (control) microbial communities from North Carolina - M.Soil.4.yng.170610	Environmental	Open in IMG/M
3300012511	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_10	Environmental	Open in IMG/M
3300012514	Unplanted soil (control) microbial communities from North Carolina - M.Soil.1.old.130510	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014272	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailB_D1	Environmental	Open in IMG/M
3300014300	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D1	Environmental	Open in IMG/M
3300014302	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D2	Environmental	Open in IMG/M
3300014319	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleA_D1	Environmental	Open in IMG/M
3300014879	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT45_16_10D	Environmental	Open in IMG/M
3300014880	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_16_10D	Environmental	Open in IMG/M
3300014882	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231B'_16_10D	Environmental	Open in IMG/M
3300014883	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT760_16_10D	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300021063	Subsurface sediment microbial communities from Mancos shale, Colorado, United States - Mancos D4	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025791	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300027395	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 PM (SPAdes)	Host-Associated	Open in IMG/M
3300027647	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38 HiSeq	Environmental	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027819	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW37 contaminated, 5.8 m (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027961	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300028145	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK04	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031228	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033481	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_CT	Environmental	Open in IMG/M
3300033813	Sediment microbial communities from East River floodplain, Colorado, United States - 30_j17	Environmental	Open in IMG/M
3300034148	Sediment microbial communities from East River floodplain, Colorado, United States - 18_j17	Environmental	Open in IMG/M
3300034149	Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0055469_100536763	3300003999	Natural And Restored Wetlands	MEPTAAEKRQALKTMLAEPLCHIAPSCNDGIQARLVEWLG
Ga0055437_101441171	3300004009	Natural And Restored Wetlands	MEMTAGEKRKTLKAMMQQPTCNLAPSCNDGIQARLVEWLGFPLVHISGSGQHRSQGFADA
Ga0055460_100525701	3300004011	Natural And Restored Wetlands	MELTATEKRKALKALMQQPTCHIAPSCNDGIQARLVEWLGFP
Ga0055499_100119941	3300004047	Natural And Restored Wetlands	MEMTAGEKRKTLKAMMQQPTCHLAPSCNDGIQARLVEWLGFPLVHISGSGQH
Ga0055490_102887092	3300004052	Natural And Restored Wetlands	MDTTATEKRKALRKMMEGPICHIAPSCNDGIQARLVEWLGFPLVHISGSGQHRSLGFAD
Ga0062593_1006746421	3300004114	Soil	MEPTAAEKRQALKTMLAEPLCHIAPSCNDGIQARLVEWLGFPVVHISGSGQHRTLGFADAGL
Ga0062589_1018753821	3300004156	Soil	MELTATEKRKALRAMLQESVCHLAPSCNDGIQARLVEWLGFPLVHISGS
Ga0062589_1023846201	3300004156	Soil	MAMTANEKRKALKAMMQQPTCHLAPSCNDGIQARLVEWLGLPLVHISGSGQHRSLGFADAGLLTL
Ga0066398_101584541	3300004268	Tropical Forest Soil	MEATTTDKRKALRKMMQGPGCHIAPSCNDGIQARLVEWLGFPLVHISGSGQHRS
Ga0063356_1049475462	3300004463	Arabidopsis Thaliana Rhizosphere	MTEKRKTLRGLLQGPGCSIAPSCNDGIQARLVEWLGFPLVHISGSGQHRALGFADAGMLT
Ga0063356_1056462782	3300004463	Arabidopsis Thaliana Rhizosphere	MTMTANEKRRALKAMMRQPTCHLAPSCNDGIQSRLVEWLGFPLVHISGSGQHRSLGFADAGL
Ga0062594_1031921421	3300005093	Soil	MAMTANEKRRALKAMMQQPTCHLAPSCNDGIQARLVEWLKFPLVHISGSGQHRSLGFADAGL
Ga0066679_109063262	3300005176	Soil	MESTAAEKRQALRKMLGEPTCHVAPSCNDGIQARLVEWLGFPLVHISGSG
Ga0066388_1059093312	3300005332	Tropical Forest Soil	MEMTSAEKRKALRKMLQEPQCHIAPSCNDGIQARLVEWLGFPLVHISGSGQHRSLGFADAGLLTLT
Ga0070691_100636991	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MESTAAEKRQSLKKMLDEPACHIAPSCNDGIQARLVEWLGLPLVHISGSGQHRSLG
Ga0070669_1009137401	3300005353	Switchgrass Rhizosphere	MEMTAGEKRKALKTLMQESVCHLAPSCNDGIQARLVEWLGFPLVHISGS
Ga0070706_1019838671	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MELTAGDKRKSLRTMLNEPVCHIAPSCNDGIQARLVEWLGFPL
Ga0070686_1018962212	3300005544	Switchgrass Rhizosphere	MESTAAEKRQSLKKMLDEPACHTAPSCNDGIQARLVEWLGFPLVHISGSGQHR*
Ga0070704_1011852941	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MEKTANEKRKVLSGLLKEPACHIAPSCNDGIQARLVEWLGFPLVHISGSGQHRALGFADA
Ga0070704_1022614021	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MQSTTAEKRQSLKKMLDEPACHIAPSCNDGIQARLVEWLGFPLVHISGSGQHRSLGYADA
Ga0066661_101994151	3300005554	Soil	MESTTTDKRKALRKMLEGPGCQIAPSCNDGIQARLVEWLGFPVVHI
Ga0066698_110500841	3300005558	Soil	MELTAGDKRKSLRTMLNEPVCHIAPSCNDGIQARLVEWLGFPLVHISGSGQHRALGFADAGLLTL
Ga0068856_1019082501	3300005614	Corn Rhizosphere	MELSAAEKRQSLKKMLDEPACHIAPSCSDGIQARLVEWLGFPLVHISGSG
Ga0068861_1001895571	3300005719	Switchgrass Rhizosphere	MESTAAEKRQSLKKMLDEPACHIAPSCNDGIQARLVEW
Ga0066903_1079978432	3300005764	Tropical Forest Soil	MEATTTDKRKALRKMMQGPGCHIAPSCNDGIQARLVEWLGFPLVH
Ga0074479_103738382	3300005829	Sediment (Intertidal)	MAMTANEKRKALKAMMQQPTCHLAPSCNDGIQARLVEWLKFPLVHIS
Ga0068851_103447172	3300005834	Corn Rhizosphere	MQSTTAEKRQSLKKMLDEPACHIAPSCNDGIQARLVEW
Ga0074470_109450201	3300005836	Sediment (Intertidal)	MAMTASDKRKKLKSMMQQPTCHLAPSCNDGIQARLVEWMGLPLVHISGSGQHRSLGFADAGLLTL
Ga0075295_10199112	3300005879	Rice Paddy Soil	MEPTAAEKRQALKTMLAEPLCHIAPSCNDGIQARLVEWLGF
Ga0075292_10087061	3300005887	Rice Paddy Soil	MEPTAAEKRQALKTMLAEPLCHIAPSCNDGIQARLVEWLGFPLVHISGSGQHRSLGF
Ga0081455_101640253	3300005937	Tabebuia Heterophylla Rhizosphere	MEATTMEKRKALRKMMQGPGCHIAPSCNDGIQARLVEWLGFPLVHISGSGQHRALGFADA
Ga0075417_106697771	3300006049	Populus Rhizosphere	MEATAAEKRKALRSMLNEPVCHIAPSCNDGIQARLVEWLGFPLVHIS
Ga0070716_1005521102	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MEPTIAERRKSLRAMLKGPGCHIAPSCNDGIQARLVEWL
Ga0075428_1000698741	3300006844	Populus Rhizosphere	MESTAAEKRQALRKMLGEPTCHIAPSCNDGIQARLVEWLGFP
Ga0075428_1026681222	3300006844	Populus Rhizosphere	MEATTTEKRKALRKMMQGPGCHIAPSCNDGIQARLVEWLGFPLVHIS
Ga0075420_1006616262	3300006853	Populus Rhizosphere	MELTASEKRKALKAMMQQSVCHLAPSCNDGIQARLVEWL
Ga0075425_1005522971	3300006854	Populus Rhizosphere	MESTAAEKRQALRKMLGKPTCHVAPSCNDGIQARLVEWLGFPLVHISGS
Ga0075425_1021779722	3300006854	Populus Rhizosphere	MESTVAEKRKSLRAMMQGSTCQIAPSCNDGIQARLVEWLGFPLVHISGSGQHRSLGFADA
Ga0068865_1002148543	3300006881	Miscanthus Rhizosphere	MESTAAEKRQSLKKMLDEPACHIAPSCNDGIQARLVEWLGFPLVHISGSGQHRSLGYADA
Ga0075424_1009795951	3300006904	Populus Rhizosphere	MEATTTEKRKALRKMMQGPGCHIAPSCNDGIQARLVEWLGFPLVHISGSG
Ga0075424_1024861332	3300006904	Populus Rhizosphere	MESTAAEKRQALRKMLGKPTCHVAPSCNDGIQARLVEWLGFPLVHISGSGQHRSL
Ga0079216_100757193	3300006918	Agricultural Soil	MELTATEKRKALRAMLQESVCHLAPSCNDGIQARLVEWLGFPLVHISGSGQHR
Ga0079216_120143101	3300006918	Agricultural Soil	MEKTATEKRKSLREMLQGPGCSIAPSCNDGIQARLVEWLG
Ga0075435_1014576172	3300007076	Populus Rhizosphere	MELSAAEKRQSLKKMLDEPACHIAPSCSDGIQARLVEWLGFPLVHISGSGQHRSLGFADAGLLTLT
Ga0105106_109091122	3300009078	Freshwater Sediment	MTANEKRKALKAMMQQPTCHLAPSCNDGIQARLVEWQGF
Ga0105240_103102123	3300009093	Corn Rhizosphere	MESTAAEKRQSLKKMLDEPACHIAPSCNDGIQARLVEWL
Ga0111539_111046671	3300009094	Populus Rhizosphere	MESTAAEKRQSLKKMLDEPACHIAPSCNDGIQARLVEWLGLPLLHLSGSGQHRSL
Ga0111539_131740372	3300009094	Populus Rhizosphere	MESTAAEKRQALRKMLGEPTCHIAPSCNDGIQARLVEWLGFPLVHISGS
Ga0075423_125083681	3300009162	Populus Rhizosphere	MESTAAEKRQALRKMLGEPTCHIAPSCNDGIQARLVEWLGFPLVHISGSGQHRSLGFAD
Ga0105242_126747191	3300009176	Miscanthus Rhizosphere	MATAADKRKTLKQLVQQPTCHIAPSCNDGIQARLVEWLKFPLVHISGSGQHRSLGFADA
Ga0105347_13582472	3300009609	Soil	MEMTASEKRKALKAMMQQSVCHLAPSCNDGIQARLVEWLGFPLVHISGS
Ga0126374_109465091	3300009792	Tropical Forest Soil	MEWTTTDKRKALRKMMQGPGCHIAPSCNDGIQARLVEWL
Ga0105088_10707292	3300009810	Groundwater Sand	MEATTTEKRKALRKMMQGPGCHIAPSCNDGIQARL
Ga0105085_10644511	3300009820	Groundwater Sand	MEMTASEKRKTLKALMQQPTCHLAPSCNDGIQARLVEWLGFSLVHISGSGQHRSQG
Ga0126380_118735171	3300010043	Tropical Forest Soil	MEATTTDKRKALRKMMQGPGCHIAPSCNDGIQARLVE
Ga0126370_122658221	3300010358	Tropical Forest Soil	MEATTTDKRKALRKMMQGPGCHIAPSCNDGIQARLVEWLGFPLVHISGSGQHRSLG
Ga0126376_102962061	3300010359	Tropical Forest Soil	MEATTTDKRKALRKMMQGPGCHIAPSCNDGIQARLVEWLGFPLVHISGSGQHRSLGFADA
Ga0126376_118161322	3300010359	Tropical Forest Soil	MEATTTEKRKALRKMMQGPGCHIAPSCNDGIQARLVEWLGFP
Ga0126378_100981274	3300010361	Tropical Forest Soil	MEATITEKRKSLRAMLREPGCHIAPSCNDGIQARLVEWLGFPLVHISGSGQHRSLGFA
Ga0126377_114532171	3300010362	Tropical Forest Soil	MEATTTEKRKALRKMMQGPGCHIAPSCNDGIQARLV
Ga0126377_117287931	3300010362	Tropical Forest Soil	MEATTTEKRKALRKMMQGPGCHIAPSCNDGIQARLVEWLGFPLVHISGSGQHRS
Ga0134126_111857891	3300010396	Terrestrial Soil	MELSAAEKRQSLKKMLDEPACHTAPSCNDGIQARLVEWLGFPLVHI
Ga0126383_113320752	3300010398	Tropical Forest Soil	MEATTTEKRKALRKMIQGPGCHIAPSCNDGIQARLVEWLGFPLVHISGSG
Ga0134123_128973772	3300010403	Terrestrial Soil	MESTAAEKRQALRKMLGEPTCHIAPSCNDGIQARLVEWLGFPLVHISG
Ga0134123_131960481	3300010403	Terrestrial Soil	MESTAAEKRQTLRKMLTEPTCHVAPSCNDGIQARLVEWLGFPL
Ga0137323_10340053	3300011409	Soil	MTASEKRKALKALMQQPTCHLAPSCNDGIQARLVEWLGFP
Ga0137439_11072832	3300011424	Soil	MEMTTSEKRKALKAMMQQPMCHLAPSCNDGIQARLVEWLGFPLVHISG
Ga0137423_10937051	3300011430	Soil	MTANEKRKALKAMMQQPTCHLAPSCNDGIQARLVEWQGFP
Ga0137464_10251451	3300011434	Soil	MAMTANEKRKALKAMMQQPTCHLAPSCNDGIQSRLVEWLGFPLVHISGSGQHRSLG
Ga0137426_10073244	3300011435	Soil	MAMTANEKRKALKAMMQQPTCHLAPSCNDGIQSRLVEWLGFPLVHISGSGQ
Ga0137429_10488373	3300011437	Soil	MTASEKRKALKALMQQPTCHLAPSCNDGIQARLVEW
Ga0137427_103384061	3300011445	Soil	MDKTAAEKRQALRKMMQGPGCQIAPSCNDGIQARLVEWLGFPLVHISGSGQHRSLGFADAGLLT
Ga0137381_109786171	3300012207	Vadose Zone Soil	MELTAGDKRKSLRTMLNEPVCHIAPSCNDGIQARLVEWLGFPLV
Ga0137449_11408311	3300012227	Soil	MTANEKRKALKAMMQQPTCHLAPSCNDGIQARLVEWQGFPLVHISGSGQHRSLGFADAG
Ga0137384_101036921	3300012357	Vadose Zone Soil	MEATTTEKRKALRKMMQGPGCHIAPSCNDGIQARLVEWLGFPLVHISGSGQHRSLGFADAGLLTLTDMINRAREI
Ga0157331_10006221	3300012486	Soil	MESTAAEKRKALRKMLAEPTCHIAPSCNDGIQARLVEWLGFPLVHISGSGQH
Ga0157331_10177462	3300012486	Soil	MELSAAEKRQSLKKMLDEPACHTAPSCNDGIQARLVEWLGFPLVHISG
Ga0157351_10109642	3300012501	Unplanted Soil	MELSAAEKRQSLKKMLDEPACHIAPSCNDGIQARLVEWLG
Ga0157332_10936122	3300012511	Soil	MELSAAEKRQSLKKMLDEPACHIAPSCSDGIQARLVEWLGF
Ga0157330_10748582	3300012514	Soil	MESTAAEKRQALRKMLGEPTCHIAPSCNDGIQARLVEWLGFPLVHISGSGQHR
Ga0137394_103601162	3300012922	Vadose Zone Soil	MEATTTEKRKALRKMMQGPGCHIAPSCNDGIQARLVEWLGF
Ga0137394_113441122	3300012922	Vadose Zone Soil	MEATTTEKRKALRKMMQGPGCHIAPSCNDGIQARLVEWLGFPLVHISGSGQHRSLGFA
Ga0137359_100488771	3300012923	Vadose Zone Soil	MESTTTDKRKALRKMLQGPGCQIAPSCNDGIQARLVEWLGFPVVHISGSGQHRALGFADAGL
Ga0153915_134539162	3300012931	Freshwater Wetlands	LEAAATTKRKSLRTMMLEPGCHLAPSCNDGIQARLVKWLGFPLVHISGSGQHRALGFADVEAKYRY*
Ga0137410_117871232	3300012944	Vadose Zone Soil	MESTAAEKRQALRKMLTEPTCHVAPSCNDGIQARLVEWLGFPLVHISGSGQH
Ga0126375_113248982	3300012948	Tropical Forest Soil	MEATTTDKRKALRKMMQGPGCHIAPSCNDGIQARLVEWLGF
Ga0126369_100396631	3300012971	Tropical Forest Soil	MEATITEKRKSLRAMLREPGCHIAPSCNDGIQARLVEWLGFPLVHISGSG
Ga0126369_103126972	3300012971	Tropical Forest Soil	MEATIAEKRKSLRKMLQEPQCHIAPSCNDGIQARLVEWLGFP
Ga0126369_122062072	3300012971	Tropical Forest Soil	MEATTTEKRKALRKMMQGPGCHIAPSCNDGIQARLVEWLGFPLVHISGSGQHRSLGFADAGLL
Ga0164308_106183801	3300012985	Soil	MELSAAEKRQSLKKMLDEPACHIAPSCSDGIQARLVEWLGFPLVHISGSGQHRSLGFAAG
Ga0157372_101355401	3300013307	Corn Rhizosphere	MQSTTAEKRQSLKKMLDEPACHIAPSCNDGIQARLVEWLGFPLVHISGSGQHRSLGFADAGL
Ga0075327_11446042	3300014272	Natural And Restored Wetlands	MELNATEKRKALRAMMQEAVCHIAPSCNDGIQARLVEWLGFPLVHISGSGQ
Ga0075321_10153301	3300014300	Natural And Restored Wetlands	MEFTATEKRKALKKMLAEPSCHLAPSCNDGIQARLVEWLGF
Ga0075310_10024661	3300014302	Natural And Restored Wetlands	MELTAAEKRQSLRKMLSEPKCHIAPSCNDGIQARLVEWLGFPLVHISGSGQHRALGFADA
Ga0075348_10949732	3300014319	Natural And Restored Wetlands	MAMTANEKRKALKAMMQQPNCHLAPSCNDGIQARLVEWLGFPLVHISGSGQHRSLGFADAGLLTL
Ga0180062_10828791	3300014879	Soil	MDKTAAEKRQALRKMMQGPGCQIAPSCNDGIQARLVEWLGFPLVHISGSGQHRSLGFADA
Ga0180082_11663791	3300014880	Soil	MTANEKRKALKAMMQQPTCHLAPSCNDGIQARLVEWQGFPLVHISGSGQHRSLGFADA
Ga0180069_10807712	3300014882	Soil	MEATAAEKRTALRKMLEEPTCHLAPSCNDGIQARLVEWLGFPLVHISGSGQHRSLGFADA
Ga0180086_10812691	3300014883	Soil	MEATATEKRQALRKMLAEPVCHIAPSCNDGIQARLVEWLGFPLIHISGSGQHRALGFA
Ga0182037_116447932	3300016404	Soil	MEPTAAEKRQALNKMLDEPTCHIAPSCNDGIQARLIEWLGFPLVHISGSGQHRSLGFADAGLLTLT
Ga0187821_100228834	3300017936	Freshwater Sediment	MELTATEKRKTLRKMLAESACHLAPSCNDGIQARLVEWLGF
Ga0184604_100012464	3300018000	Groundwater Sediment	MESTAAEKRLALKKMLAEPSCHIAPSCNDGIQARL
Ga0184604_102441612	3300018000	Groundwater Sediment	MESTAAEKRQALRKMLAEPVCHVAPSCNDGIQARLVEWLGFPLVHISGSG
Ga0184634_104303961	3300018031	Groundwater Sediment	MEKTATEKRKVLGALIKAPVCHIARSCNDGIQARLVDWLGFPLVHISGSGQHRSLGFADAVDIP
Ga0184621_103253032	3300018054	Groundwater Sediment	MEATTTEKRKALRKMMQGLGCHIAPSCNDGIQARLVEWLGFPLVHISGSGQHRSLG
Ga0184623_103462721	3300018056	Groundwater Sediment	MELNATEKRKALRAMLQESVCHLAPSCNDGIQARLVEWLGFPLVHISGSGQHRALGFAD
Ga0184623_104093781	3300018056	Groundwater Sediment	MEATAAEKRTALRKMLEEPTCHLAPSCNDGIQARLVEWLGFPLVHISGSGQHRSLGFADAGLL
Ga0184640_101927932	3300018074	Groundwater Sediment	MEMTASEKRKALKTMMQQPTCHLAPSCNDGIQARLVEWLGFPLVHISG
Ga0184612_104769152	3300018078	Groundwater Sediment	MEKTASEKRKALGALIKEPICHIAPSCNDGIQARLVEWLGFPLVHISGSGQHRALGFADAGLL
Ga0184627_100480794	3300018079	Groundwater Sediment	MEKTASEKRKVLGALIKEPVCHIAPSCNDGIQARLVEWLGFPLVHISGSGQHRSLGFADAGLLTL
Ga0190265_121281912	3300018422	Soil	MELNATEKRKALRAMLQESVCHLAPSCNDGIQARLVEWLGFPLVHISGSGQHRALGFADAGLLTLT
Ga0066667_113633841	3300018433	Grasslands Soil	MEPTATEKRKALRVMLQGPECQLAPSCNDGIQARLV
Ga0190273_107986662	3300018920	Soil	MAMTANEKRKALKAMMQQPLCHLAPSCNDGIQSRLVEWLGFPLVHISG
Ga0190264_118577541	3300019377	Soil	MGEKRKTLRALLQAPGCSIAPSCNDGIQARLVEWLGFPLV
Ga0193707_10230244	3300019881	Soil	MESTAAEKRQALKKMLAEPSCHIAPSCNDGIQARLVEWLGFPLVHISG
Ga0206227_10216232	3300021063	Deep Subsurface Sediment	MEMTASEKRKALKAMMQQPTCHLAPSCNDGIQARLVEWLGFPLVHISGSGQHRSQGFAD
Ga0224452_11305442	3300022534	Groundwater Sediment	METTAAEKRKSLRAMLNEPVCHIAPSCNDGIQARLVEWLGFPLVHISGSGQHRSLGF
Ga0209640_101221641	3300025324	Soil	VILETAATAKRKSLRAMMLEPVCHLAPSCNDGIQARLVEWLGFPLVHISGNGQHRS
Ga0209640_113199281	3300025324	Soil	VILETAATAKRKSLRAMMLEPVSHLAPSCNDGIQARLVEWLGFPLVHISG
Ga0210115_10363101	3300025791	Natural And Restored Wetlands	MDTTATEKRKSLRKMMEGPGCHIAPSCNDGIQARLVEWLGFPL
Ga0207662_102326552	3300025918	Switchgrass Rhizosphere	MQSTTAEKRQSLKKMLDEPACHIAPSCNDGIQARLVEWLGFPLVHISGSGQHRSLGFADAGLLTL
Ga0207669_107575472	3300025937	Miscanthus Rhizosphere	MQSTTAEKRQSLKKMLDEPACHIAPSCNDGIQARLV
Ga0207665_102948451	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MEPTIAERRKSLRAMLKGPGCHIAPSCNDGIQARLVEWLGFPLVHI
Ga0209058_11455791	3300026536	Soil	MELTAGDKRKSLRTMLNEPVCHIAPSCNDGIQARLVEWLGFPLVHISGSGQHRALGFADAGLL
Ga0209996_10579761	3300027395	Arabidopsis Thaliana Rhizosphere	MESTAAEKRQALKKMLAQPVCHMAPSCNDGIQARLVEWLGFPLVHISGSGQHRSLGFADA
Ga0214468_11877082	3300027647	Soil	MEKSATEKRETLHSLLQGPGCSIAPSCNDGIQARLVEWLGFPLVHIS
Ga0209819_101273522	3300027722	Freshwater Sediment	MEATTTEKRKALRKMMQGPGCHIAPSCNDGIQARLVEWLGFPLVHISG
Ga0209514_103550721	3300027819	Groundwater	MEAAATTKRKTLRAMMLEPECHLAPSCNDGIQARLVEWLGFPL
Ga0209814_105100561	3300027873	Populus Rhizosphere	MEATAAEKRKALRSMLNEPVCHIAPSCNDGIQARLVEWLGFPLVHISG
Ga0209486_109864892	3300027886	Agricultural Soil	MELNATEKRKALRAMLQESVCHLAPSCNDGIQARLVEWLGF
Ga0207428_109559151	3300027907	Populus Rhizosphere	MESTASEKSQSLKKMLDEPICHIAPSCNDGIQARLV
Ga0209853_11190722	3300027961	Groundwater Sand	MEATTTEKRKALRKMMQGPGCHIAPSCNDGIQARLVEWLGFPLV
Ga0247663_10073611	3300028145	Soil	MEMTAGEKRKALKAMMQQSTCQLAPSCNDGIQARLVEWLGFPLVHISGSG
Ga0307503_109494911	3300028802	Soil	MESTAAEKRQALRKMLGEPTCHIAPSCNDGIQARLV
Ga0307308_106061442	3300028884	Soil	MESTAAEKRQALRKMLGEPTCHVAPSCNDGIQARLVEWLGFPLVHISG
Ga0299907_103319803	3300030006	Soil	MESTASEKRQALRNMLQESKAHIAPSCNDGIQARLVEWLGFPLVHISGSGQHRSLGFADAGLL
Ga0307497_105478682	3300031226	Soil	MESTAAEKRQALRKMLGEPTCHIAPSCNDGIQARLVEWLGFPLVHISGSGQHRSL
Ga0299914_111569751	3300031228	Soil	MDLTAAEKRKALRAILNEARCHIAPSCNDGIQARLVEWLGFPLAHISGSGQHRALG
Ga0307408_1000567551	3300031548	Rhizosphere	MEKTAEEKRRTLRALLQGPGCSIAPSCNDGIQARLVEWLGFPLVHISGSGQH
Ga0307408_1001225244	3300031548	Rhizosphere	MNMTANQKRKALKAMMQQPTCHLAPSCNDAIQARLVEWMDFPLVHISGSGQHRSLGFADAGLLTL
Ga0307408_1016988202	3300031548	Rhizosphere	MEKTTNEKRKTLRALLQGPGCSIAPSCNDGIQARLVEWLGF
Ga0310886_106446161	3300031562	Soil	MTANEKRKALKVMMQQPTCHLAPSCNDAIQARLVEWMDFPLVHISGSGQHR
Ga0307475_108147392	3300031754	Hardwood Forest Soil	MEATIAERRKSLRAMLKGPGCHIAPSCNDGIQARLVEWLGFPLVHISGSGQHRSLGFADA
Ga0307410_121281422	3300031852	Rhizosphere	MEKTTNEKRKTLRALLQGPGCSIAPSCNDGIQARLVEWLGFPLVHISGS
Ga0306925_112624282	3300031890	Soil	MESTAMDKRKALRKMLQGPGCQIAPSCNDGIQARLVEWLGFPLVHISGSGQHRALGFADA
Ga0310900_115954882	3300031908	Soil	MELNATEKRKALRAMLQESICHLAPSCNDGIQARLVEWLGFPLVHISGSGQHRSL
Ga0310884_108830171	3300031944	Soil	MAMTANEKRKALKVMMQQPTCHLAPSCNDAIQARLVEWMDFPLVHISGSGQHRSLGFA
Ga0214473_121727222	3300031949	Soil	MEATAAEKRTALRKMLEEPICHLAPSCNDGIQARLVEWLGFPLVHI
Ga0326597_112516211	3300031965	Soil	MEMTASEKRKALKALMQQPTCHLAPSCNDGIQARLVEWLGF
Ga0335070_100612411	3300032829	Soil	MESTAAEKRQALKKMLAEPSCHVAPSCNDGIQARLVEWLGFPLVHISGSGQHRSLGFAD
Ga0310914_112328721	3300033289	Soil	MESTAMDKRKALRKMLQGPGCQIAPSCNDGIQARLVEWL
Ga0214472_104673491	3300033407	Soil	MEATATEKRKTLRRLLQEPKAHIAPSCNDGIQARLVEWLGFPLVHI
Ga0214472_105004712	3300033407	Soil	VILETAATAKRKSLRAMMLEPVCHLAPSCNDGIQARLVEWLGFPLVHISGNGQHRSLGLPTPGCSP
Ga0316603_110201882	3300033413	Soil	MAMTANEKRKALKAMMQQPTCHLAPSCNDGIQSRLVEWLGFPLVHISGSGQHR
Ga0316600_104158332	3300033481	Soil	MAMTANEKRKALKAMMQQPTCHLAPSCNDGIQSRLA
Ga0364928_0040945_797_994	3300033813	Sediment	MMEAPATTKRKSLRATMLEPACHLAPSCNDGIQARLVEWLGFPLVHISGSGQHRSLGFADAGLLTL
Ga0364927_0215349_438_569	3300034148	Sediment	MDKTAAEKRQALRKMMQGPGCQIAPSCNDGIQARLVEWLGFPLV
Ga0364929_0025217_1592_1735	3300034149	Sediment	MESTAAEKRLALKKMLAEPSCHVAPSCNDGIQARLVEWLGFPLVHISG
Ga0364929_0053060_1_183	3300034149	Sediment	MAMTANEKRKALKAMMQQPTCQLAPSCNDGIQARLVEWQGFPLVHISGSGQHRSLGFADA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F041966

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences