Metagenome / Metatranscriptome Family F041949

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F041949
Family Type	Metagenome / Metatranscriptome
Number of Sequences	159
Average Sequence Length	43 residues
Representative Sequence	AADSPLLAEFSRLHRISVSLESGVLLAGLAAMYLMVRELGAGR
Number of Associated Samples	129
Number of Associated Scaffolds	159

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	90.57 %
Associated GOLD sequencing projects	122
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.61

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (88.679 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (34.591 % of family members)
Environment Ontology (ENVO)	Unclassified (32.704 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.057 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.11% β-sheet: 0.00% Coil/Unstructured: 47.89%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.61
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.61
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 159 Family Scaffolds
PF00730	HhH-GPD	20.13
PF03965	Penicillinase_R	2.52
PF01926	MMR_HSR1	2.52
PF01794	Ferric_reduct	1.89
PF02371	Transposase_20	1.26
PF02687	FtsX	0.63
PF12697	Abhydrolase_6	0.63
PF02535	Zip	0.63
PF02518	HATPase_c	0.63
PF02381	MraZ	0.63
PF05598	DUF772	0.63
PF00578	AhpC-TSA	0.63
PF00440	TetR_N	0.63
PF01850	PIN	0.63
PF12840	HTH_20	0.63
PF01933	CofD	0.63

COG ID	Name	Functional Category	% Frequency in 159 Family Scaffolds
COG0122	3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	20.13
COG0177	Endonuclease III	Replication, recombination and repair [L]	20.13
COG1059	Thermostable 8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	20.13
COG1194	Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairs	Replication, recombination and repair [L]	20.13
COG2231	3-Methyladenine DNA glycosylase, HhH-GPD/Endo3 superfamily	Replication, recombination and repair [L]	20.13
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	2.52
COG3682	Transcriptional regulator, CopY/TcrY family	Transcription [K]	2.52
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.26
COG0391	Archaeal 2-phospho-L-lactate transferase/Bacterial gluconeogenesis factor, CofD/UPF0052 family	Carbohydrate transport and metabolism [G]	0.63
COG0428	Zinc transporter ZupT	Inorganic ion transport and metabolism [P]	0.63
COG2001	MraZ, DNA-binding transcriptional regulator and inhibitor of RsmH methyltransferase activity	Translation, ribosomal structure and biogenesis [J]	0.63

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.68 %
Unclassified	root	N/A	11.32 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.68 %
Unclassified	root	N/A	11.32 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.68 %
Unclassified	root	N/A	11.32 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	36.48 %
Unclassified	root	N/A	11.32 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.26 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.63 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.63 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	20.13 %
Unclassified	root	N/A	11.32 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.26 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.63 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.63 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	20.13 %
Unclassified	root	N/A	11.32 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.63 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.63 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.63 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.63 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	20.13 %
Unclassified	root	N/A	11.32 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.63 %
Bacteroidetes Order II. Incertae sedis	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidetes Order II. Incertae sedis	0.63 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.63 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.63 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	20.13 %
Unclassified	root	N/A	11.32 %
Rhodothermaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidetes Order II. Incertae sedis → Rhodothermaceae	0.63 %
Acidiphilium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	0.63 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.63 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.63 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	20.13 %
Unclassified	root	N/A	11.32 %
Salinibacter	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidetes Order II. Incertae sedis → Rhodothermaceae → Salinibacter	0.63 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.63 %
Acidiphilium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	0.63 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.63 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	20.13 %
Unclassified	root	N/A	11.32 %
Salinibacter ruber	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidetes Order II. Incertae sedis → Rhodothermaceae → Salinibacter → Salinibacter ruber	0.63 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.63 %
Acidiphilium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	0.63 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.63 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001167\|JGI12673J13574_1002671	Not Available	1006	Open in IMG/M
3300002914\|JGI25617J43924_10141203	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	835	Open in IMG/M
3300005167\|Ga0066672_10450960	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300005178\|Ga0066688_10923657	All Organisms → cellular organisms → Bacteria → Acidobacteria	536	Open in IMG/M
3300005179\|Ga0066684_10203533	All Organisms → cellular organisms → Bacteria	1281	Open in IMG/M
3300005180\|Ga0066685_10798153	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300005181\|Ga0066678_10505182	Not Available	804	Open in IMG/M
3300005447\|Ga0066689_10083555	All Organisms → cellular organisms → Bacteria	1798	Open in IMG/M
3300005540\|Ga0066697_10599068	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300005542\|Ga0070732_10934856	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300005554\|Ga0066661_10403111	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300005559\|Ga0066700_11136208	All Organisms → cellular organisms → Bacteria → Acidobacteria	510	Open in IMG/M
3300005560\|Ga0066670_10363948	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300005576\|Ga0066708_10461767	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300005576\|Ga0066708_10679176	All Organisms → cellular organisms → Bacteria → Acidobacteria	654	Open in IMG/M
3300005587\|Ga0066654_10588105	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300005921\|Ga0070766_10597699	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300006046\|Ga0066652_100185522	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1778	Open in IMG/M
3300006162\|Ga0075030_100430746	All Organisms → cellular organisms → Bacteria	1051	Open in IMG/M
3300006173\|Ga0070716_101288175	All Organisms → cellular organisms → Bacteria → Acidobacteria	590	Open in IMG/M
3300006797\|Ga0066659_10054316	All Organisms → cellular organisms → Bacteria	2544	Open in IMG/M
3300006800\|Ga0066660_10019640	All Organisms → cellular organisms → Bacteria	3922	Open in IMG/M
3300006804\|Ga0079221_10721671	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300006806\|Ga0079220_10628874	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300006871\|Ga0075434_100555314	All Organisms → cellular organisms → Bacteria	1168	Open in IMG/M
3300007258\|Ga0099793_10005032	All Organisms → cellular organisms → Bacteria	4745	Open in IMG/M
3300007258\|Ga0099793_10013988	All Organisms → cellular organisms → Bacteria → Acidobacteria	3181	Open in IMG/M
3300007258\|Ga0099793_10158335	All Organisms → cellular organisms → Bacteria → Acidobacteria	1075	Open in IMG/M
3300007258\|Ga0099793_10232379	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300007258\|Ga0099793_10513489	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300007265\|Ga0099794_10036306	All Organisms → cellular organisms → Bacteria	2329	Open in IMG/M
3300009038\|Ga0099829_10887587	All Organisms → cellular organisms → Bacteria → Acidobacteria	740	Open in IMG/M
3300009038\|Ga0099829_11099549	Not Available	659	Open in IMG/M
3300009088\|Ga0099830_10308924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	1264	Open in IMG/M
3300009088\|Ga0099830_11117490	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300009088\|Ga0099830_11399061	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300009088\|Ga0099830_11424539	All Organisms → cellular organisms → Bacteria → Acidobacteria	577	Open in IMG/M
3300009162\|Ga0075423_12223993	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300009176\|Ga0105242_11718558	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300009545\|Ga0105237_12013606	All Organisms → cellular organisms → Bacteria → Acidobacteria	586	Open in IMG/M
3300010321\|Ga0134067_10059528	All Organisms → cellular organisms → Bacteria	1246	Open in IMG/M
3300010329\|Ga0134111_10241272	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300010343\|Ga0074044_10577627	Not Available	734	Open in IMG/M
3300010359\|Ga0126376_11762618	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300010359\|Ga0126376_12722255	Not Available	544	Open in IMG/M
3300010359\|Ga0126376_12834510	Not Available	534	Open in IMG/M
3300010364\|Ga0134066_10007385	All Organisms → cellular organisms → Bacteria → Acidobacteria	2109	Open in IMG/M
3300010376\|Ga0126381_102376082	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	761	Open in IMG/M
3300010396\|Ga0134126_12964263	Not Available	513	Open in IMG/M
3300010880\|Ga0126350_10856667	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300011269\|Ga0137392_11481687	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300011270\|Ga0137391_10646362	All Organisms → cellular organisms → Bacteria	883	Open in IMG/M
3300011271\|Ga0137393_10798123	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300012096\|Ga0137389_10408561	All Organisms → cellular organisms → Bacteria	1159	Open in IMG/M
3300012189\|Ga0137388_10938002	All Organisms → cellular organisms → Bacteria → Acidobacteria	800	Open in IMG/M
3300012199\|Ga0137383_11297162	All Organisms → cellular organisms → Bacteria → Acidobacteria	519	Open in IMG/M
3300012202\|Ga0137363_10313602	All Organisms → cellular organisms → Bacteria	1290	Open in IMG/M
3300012202\|Ga0137363_10320932	All Organisms → cellular organisms → Bacteria	1276	Open in IMG/M
3300012202\|Ga0137363_10909074	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	747	Open in IMG/M
3300012202\|Ga0137363_11094316	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	677	Open in IMG/M
3300012203\|Ga0137399_11181308	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	644	Open in IMG/M
3300012205\|Ga0137362_10705722	All Organisms → cellular organisms → Bacteria → Acidobacteria	867	Open in IMG/M
3300012205\|Ga0137362_10895588	Not Available	758	Open in IMG/M
3300012208\|Ga0137376_11771450	All Organisms → cellular organisms → Bacteria → Acidobacteria	508	Open in IMG/M
3300012210\|Ga0137378_10846398	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300012357\|Ga0137384_10249949	All Organisms → cellular organisms → Bacteria	1479	Open in IMG/M
3300012357\|Ga0137384_11572532	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300012361\|Ga0137360_10797548	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300012361\|Ga0137360_11791799	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300012363\|Ga0137390_10901148	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300012363\|Ga0137390_11183972	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	712	Open in IMG/M
3300012582\|Ga0137358_10397327	All Organisms → cellular organisms → Bacteria	932	Open in IMG/M
3300012683\|Ga0137398_10847358	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300012917\|Ga0137395_10453461	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	921	Open in IMG/M
3300012918\|Ga0137396_10350886	All Organisms → cellular organisms → Bacteria	1092	Open in IMG/M
3300012922\|Ga0137394_11278361	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300012924\|Ga0137413_11797074	All Organisms → cellular organisms → Bacteria → Acidobacteria	506	Open in IMG/M
3300012925\|Ga0137419_11045770	Not Available	678	Open in IMG/M
3300012925\|Ga0137419_11049234	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	677	Open in IMG/M
3300012929\|Ga0137404_12019606	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300012930\|Ga0137407_11704664	Not Available	600	Open in IMG/M
3300012960\|Ga0164301_11343633	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300012971\|Ga0126369_10768419	All Organisms → cellular organisms → Bacteria	1044	Open in IMG/M
3300012971\|Ga0126369_13152507	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300012976\|Ga0134076_10497524	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300012977\|Ga0134087_10691376	Not Available	540	Open in IMG/M
3300013306\|Ga0163162_11791544	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300014166\|Ga0134079_10663926	Not Available	527	Open in IMG/M
3300015052\|Ga0137411_1073654	All Organisms → cellular organisms → Bacteria	1003	Open in IMG/M
3300015053\|Ga0137405_1097603	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300015053\|Ga0137405_1119390	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300015241\|Ga0137418_10592992	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300015264\|Ga0137403_10699855	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidetes Order II. Incertae sedis → Rhodothermaceae → Salinibacter → Salinibacter ruber	873	Open in IMG/M
3300017823\|Ga0187818_10045643	All Organisms → cellular organisms → Bacteria	1881	Open in IMG/M
3300017930\|Ga0187825_10309650	All Organisms → cellular organisms → Bacteria → Acidobacteria	590	Open in IMG/M
3300019789\|Ga0137408_1475357	All Organisms → cellular organisms → Bacteria	1383	Open in IMG/M
3300020580\|Ga0210403_10391477	All Organisms → cellular organisms → Bacteria	1135	Open in IMG/M
3300020580\|Ga0210403_10901678	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	697	Open in IMG/M
3300020581\|Ga0210399_11569273	All Organisms → cellular organisms → Bacteria → Acidobacteria	508	Open in IMG/M
3300020582\|Ga0210395_11183980	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300021086\|Ga0179596_10474769	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	634	Open in IMG/M
3300021088\|Ga0210404_10010485	All Organisms → cellular organisms → Bacteria	3790	Open in IMG/M
3300021168\|Ga0210406_10981419	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300021170\|Ga0210400_10998758	All Organisms → cellular organisms → Bacteria → Acidobacteria	680	Open in IMG/M
3300021170\|Ga0210400_11240666	All Organisms → cellular organisms → Bacteria → Acidobacteria	599	Open in IMG/M
3300021171\|Ga0210405_10057304	All Organisms → cellular organisms → Bacteria	3078	Open in IMG/M
3300021178\|Ga0210408_10807699	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300021401\|Ga0210393_10101559	All Organisms → cellular organisms → Bacteria → Acidobacteria	2290	Open in IMG/M
3300021407\|Ga0210383_10158168	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1928	Open in IMG/M
3300021420\|Ga0210394_10011899	All Organisms → cellular organisms → Bacteria	8501	Open in IMG/M
3300021432\|Ga0210384_10899701	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	785	Open in IMG/M
3300021474\|Ga0210390_10382902	All Organisms → cellular organisms → Bacteria	1189	Open in IMG/M
3300021474\|Ga0210390_11498206	All Organisms → cellular organisms → Bacteria → Acidobacteria	534	Open in IMG/M
3300021559\|Ga0210409_10612621	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	958	Open in IMG/M
3300021560\|Ga0126371_11778384	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300022840\|Ga0224549_1017132	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1014	Open in IMG/M
3300024179\|Ga0247695_1019574	All Organisms → cellular organisms → Bacteria	951	Open in IMG/M
3300024287\|Ga0247690_1045855	Not Available	518	Open in IMG/M
3300025320\|Ga0209171_10345581	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300025941\|Ga0207711_10861091	All Organisms → cellular organisms → Bacteria	843	Open in IMG/M
3300026301\|Ga0209238_1157722	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300026307\|Ga0209469_1144832	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300026312\|Ga0209153_1164481	All Organisms → cellular organisms → Bacteria	812	Open in IMG/M
3300026548\|Ga0209161_10275412	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300026551\|Ga0209648_10592327	Not Available	612	Open in IMG/M
3300027095\|Ga0208606_107579	All Organisms → cellular organisms → Bacteria → Acidobacteria	514	Open in IMG/M
3300027109\|Ga0208603_1067557	Not Available	533	Open in IMG/M
3300027603\|Ga0209331_1084614	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300027655\|Ga0209388_1153028	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	651	Open in IMG/M
3300027655\|Ga0209388_1209943	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300027671\|Ga0209588_1191543	All Organisms → cellular organisms → Bacteria → Acidobacteria	639	Open in IMG/M
3300027674\|Ga0209118_1135105	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300027674\|Ga0209118_1149431	All Organisms → cellular organisms → Bacteria → Acidobacteria	645	Open in IMG/M
3300027765\|Ga0209073_10267821	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300027767\|Ga0209655_10245358	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	585	Open in IMG/M
3300027773\|Ga0209810_1039088	All Organisms → cellular organisms → Bacteria → Acidobacteria	2655	Open in IMG/M
3300027795\|Ga0209139_10026519	All Organisms → cellular organisms → Bacteria	2068	Open in IMG/M
3300027875\|Ga0209283_10031940	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3290	Open in IMG/M
3300027875\|Ga0209283_10891575	All Organisms → cellular organisms → Bacteria → Acidobacteria	539	Open in IMG/M
3300027898\|Ga0209067_10626310	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300028138\|Ga0247684_1023943	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	965	Open in IMG/M
3300028138\|Ga0247684_1050414	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300028906\|Ga0308309_11454244	Not Available	586	Open in IMG/M
3300030013\|Ga0302178_10143979	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1187	Open in IMG/M
3300030580\|Ga0311355_10898545	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	804	Open in IMG/M
3300030813\|Ga0265750_1000425	All Organisms → cellular organisms → Bacteria	3435	Open in IMG/M
3300030991\|Ga0073994_10047988	All Organisms → cellular organisms → Bacteria	930	Open in IMG/M
3300031057\|Ga0170834_100586202	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300031090\|Ga0265760_10336621	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300031753\|Ga0307477_10152466	All Organisms → cellular organisms → Bacteria	1612	Open in IMG/M
3300031754\|Ga0307475_11168285	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300031820\|Ga0307473_10706593	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	709	Open in IMG/M
3300031945\|Ga0310913_10971268	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300031962\|Ga0307479_11804379	Not Available	563	Open in IMG/M
3300032076\|Ga0306924_11154165	All Organisms → cellular organisms → Bacteria	841	Open in IMG/M
3300032180\|Ga0307471_100001776	All Organisms → cellular organisms → Bacteria	12072	Open in IMG/M
3300032180\|Ga0307471_101336079	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300032180\|Ga0307471_102663525	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	634	Open in IMG/M
3300032892\|Ga0335081_10423012	Not Available	1704	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.23%
Host-Associated	Host-Associated	3.77%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.82%
Aquatic	Environmental → Aquatic	4.40%
Plants	Host-Associated → Plants	3.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.14%
Freshwater	Environmental → Aquatic → Freshwater	2.52%
Peat	Environmental → Terrestrial → Peat	1.89%
Sediment	Environmental → Aquatic → Sediment	1.26%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.63%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	83.02%
Loam	Environmental → Terrestrial → Soil → Loam	5.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.14%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.52%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.89%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.26%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.26%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.63%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	47.17%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	20.13%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	13.84%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.14%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.89%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.89%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.26%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.26%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.26%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	34.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	11.95%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.40%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.40%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.89%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.26%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.26%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.26%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.26%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.26%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.26%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.26%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.63%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.63%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.63%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.63%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.63%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.63%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.63%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.63%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001167	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022840	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 1-5	Environmental	Open in IMG/M
3300024179	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK36	Environmental	Open in IMG/M
3300024287	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK31	Environmental	Open in IMG/M
3300025320	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027095	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF020 (SPAdes)	Environmental	Open in IMG/M
3300027109	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF008 (SPAdes)	Environmental	Open in IMG/M
3300027603	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027773	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300028138	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK25	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030013	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_3	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030813	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12673J13574_10026712	3300001167	Forest Soil	QATNADNPLLSEFSRLHSISVSLESVVLLAGVAAMFSLVREAA*
JGI25617J43924_101412031	3300002914	Grasslands Soil	QAAAADSPLLAEFGRLHRISVSLESGVLLAGLAAIYLMVKDLSAVGK*
Ga0066672_104509602	3300005167	Soil	NPLLSEFSKLHRVSVMLESGVLLAGLAATYLLVRESALAR*
Ga0066688_109236571	3300005178	Soil	PLLVEFGKLHRISVSLESGVLLAGLAGMYLMVKELTVAGH*
Ga0066684_102035331	3300005179	Soil	GSIQATAADSPLLAAFARLHAISVSMESAVLLAGLAAIYLLVRELALKIS*
Ga0066685_107981532	3300005180	Soil	DNPLLVEFGKLHRISVSLESGVLLAGFACIYLMVKELVTVG*
Ga0066678_105051822	3300005181	Soil	LLAEFGRLHQISVSLESGVLLAGMACMFLMVRESFRAGN*
Ga0066689_100835552	3300005447	Soil	DSPLLAEFSRLHRISVSLESGVLLAGMAAMYLMVKDLVAIGK*
Ga0066697_105990681	3300005540	Soil	MLAEFSRLHRISVSLESGVLLAGIAAMYLMARELTTWT*
Ga0070732_109348561	3300005542	Surface Soil	LLAEFNRLHRMSVMLESGVLLAGFAAMFLMVKELGTGH*
Ga0066661_104031112	3300005554	Soil	ATAADSPLLVEFGKLHRISVSLESGVLLAGLAGMYLMVKELTVAGH*
Ga0066700_111362081	3300005559	Soil	PLLVEFGKLHRISVSLESGVLLAGLACIYLMVKELVTVG*
Ga0066670_103639481	3300005560	Soil	AADSPMLLEFGRLHRISVSLESGVLLAGIAAMYLMVRELAFRSS*
Ga0066708_104617671	3300005576	Soil	LLAEFSRLHRASVSLESGVLLAGLAAMYLMAKDLGAGH*
Ga0066708_106791762	3300005576	Soil	EFSKLHRISVSLESGVLLAGLAGMYLVVKELVSVGSKF*
Ga0066654_105881052	3300005587	Soil	TAADSSLLAEFSRLHGISVSLESGVLLAGIAAMYLMVRELALKPS*
Ga0070766_105976991	3300005921	Soil	ADSPLLAEFSRLHRISVSLESGVLLAGIAAMFLMVKELPAVR*
Ga0066652_1001855222	3300006046	Soil	GKLHRISVSLESGVLLAGFACIYLMVKELVSMGQ*
Ga0075030_1004307461	3300006162	Watersheds	EFSRLHRISVSLESGVLLAGMAAMFLMVRELALRP*
Ga0070716_1012881752	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	IEATAEANPLLAEFARLHRLSVSLESGVLLAGLLGMYFMVSELGESR*
Ga0066659_100543161	3300006797	Soil	DSPLLAEFSRLHRISVSLESGVLLAGLAAMYLMVKDLGAIGK*
Ga0066660_100196401	3300006800	Soil	IQATAADSPLLAAFARLHAISVSMESAVLLAGLAAIYLLVRELALKIS*
Ga0079221_107216712	3300006804	Agricultural Soil	PLLAEFGKLHRVSVSLESGVLLAGIAAVYFLVREITAG*
Ga0079220_106288742	3300006806	Agricultural Soil	EFTRLHAISVSLESGVLLAGIAAIYLMARELAIRPS*
Ga0075434_1005553141	3300006871	Populus Rhizosphere	SAADSPYLAEFSRLHHFSVALETGVLLAGLAALYLLVRETCLKA*
Ga0099793_100050321	3300007258	Vadose Zone Soil	ARVADSPLLAEFGRLHRISVSLESGVLLAGLVVLYLMVKE*
Ga0099793_100139881	3300007258	Vadose Zone Soil	LQAAAADSPLLAEFSRLHRISVSLESGVLLAGLVAVYLMVRELAAGQ*
Ga0099793_101583351	3300007258	Vadose Zone Soil	ARVADSPLLAEFGRLHRISVSLESGVLLAGLVVLYLMVKESGVGS*
Ga0099793_102323792	3300007258	Vadose Zone Soil	FSRLHRASVSLESGVLLAGLAAIYLMAKDLGAGH*
Ga0099793_105134891	3300007258	Vadose Zone Soil	ATAADSPLLAEFSRFHRISVSLESGVLLAGFVAMYLMVKELGTIGK*
Ga0099794_100363061	3300007265	Vadose Zone Soil	LLAEFRRLHQISVSLESGVLVAGFAALFLLVREVGVGR*
Ga0099829_108875871	3300009038	Vadose Zone Soil	SPLLEEFRGLHRVSVTLESGVLLAGLVAMYLMVRELTSSH*
Ga0099829_110995492	3300009038	Vadose Zone Soil	PLLAEFGRLHSISVSLESGVLLAGLVVLYLMVKESGVGS*
Ga0099830_103089244	3300009088	Vadose Zone Soil	IQAFQATAADSPLLAEFSRLHRISVSLESGVLLAGMAAMYLMVKELGAIGK*
Ga0099830_111174902	3300009088	Vadose Zone Soil	ADSPLLAEFSRLHRISVSLESGVLLAGLVAIYLMMKELAAGQ*
Ga0099830_113990611	3300009088	Vadose Zone Soil	IQATAADSPLLAEFGRLHRISASLEGGVILAGLAALYLMAKDSGVGN*
Ga0099830_114245391	3300009088	Vadose Zone Soil	QATAADSPLRAEFARLHRVSVSLESGVLMAGLVAMYLMVKDLAL*
Ga0075423_122239931	3300009162	Populus Rhizosphere	EATAAASPLLAEFSRWHRFSVGLESGVLLAGLLAWYCLVRESAR*
Ga0105242_117185582	3300009176	Miscanthus Rhizosphere	TAEANPLLAEFARLHRLSVSLESGVLLAGLLGMYFMVSELGESR*
Ga0105237_120136062	3300009545	Corn Rhizosphere	EANPLLAEFARLHRLSVSLESGVLLAGLLGMYFMVSELGESR*
Ga0134067_100595283	3300010321	Grasslands Soil	LAEFSRLHRASVSLESGVLLAGLAAMYLMAKDLGAGH*
Ga0134111_102412721	3300010329	Grasslands Soil	MGSIQATAADSPMLLEFGRLHRISVSLESGVLLAGIAAMYLMVRELAFRSS*
Ga0074044_105776271	3300010343	Bog Forest Soil	IQATGADSPLLAEFGRLHTISVSLESGVLLAGFAAMYLMVRELMAGR*
Ga0126376_117626181	3300010359	Tropical Forest Soil	AADSPLLAEFGKLHQISVSLESGVLLAGIACMYLMVRELARG*
Ga0126376_127222551	3300010359	Tropical Forest Soil	KFARLHRISVSLESGVLLAGFGALYLTVKDLASQP*
Ga0126376_128345102	3300010359	Tropical Forest Soil	AEFGRLHQISVSLESGVLLAGFACIYLMVRELARG*
Ga0134066_100073851	3300010364	Grasslands Soil	SIQATVADSPLLAEFSRLHRASVSLESGVLLAGLAAMYLMAKDLGAGH*
Ga0126381_1023760821	3300010376	Tropical Forest Soil	PLLAEFSRMHRISVSLESGVLLLGFVAMYLMVRELGAAAK*
Ga0134126_129642632	3300010396	Terrestrial Soil	FGRLHRVSVFLESGVLLAGIAAFYFMVREMAGTP*
Ga0126350_108566672	3300010880	Boreal Forest Soil	SIQATAADSPLLAEFTRLHSISVSLESVVLLAGITGMFLLVREVARVA*
Ga0137392_114816871	3300011269	Vadose Zone Soil	TAADSPLLAAFSRLHRISVSLESGVLLAGLVAMYLMVKDLGAIGK*
Ga0137391_106463621	3300011270	Vadose Zone Soil	AADSPLLAEFSRLHRISVSLESGVLLAGFVTMYLMVRELASVGH*
Ga0137393_107981231	3300011271	Vadose Zone Soil	MGSIQATAAHSFLLAEFSKLHRISVSLESGVLLAGLAAMYLMVKELGALR*
Ga0137389_104085611	3300012096	Vadose Zone Soil	ATAADSPLLAEFSRLHRISVSLESGVLLAGLAAMYLMVKDLGAIGK*
Ga0137388_109380021	3300012189	Vadose Zone Soil	ATAEDSPLLAEFSRLHRISVLLESGGLLAGLAAFYFMVRETGVRY*
Ga0137383_112971621	3300012199	Vadose Zone Soil	AADSPLLAEFSRLHRISVSLESGVLLAGLVAMYLTVRDLAIAQ*
Ga0137363_103136022	3300012202	Vadose Zone Soil	EFSKLHRISVSLESGVLLAGLAAMFLMVRELSSVGR*
Ga0137363_103209321	3300012202	Vadose Zone Soil	LAEFSRLHRISVSLESGVLLAGLTAMFLMVKELGAGR*
Ga0137363_109090743	3300012202	Vadose Zone Soil	IQATAADSPLLAEFGRLHQISVSLESGVLLAGMACMFLMVRESFRAGN*
Ga0137363_110943162	3300012202	Vadose Zone Soil	SPLLAEFGKLHRVSVSLESGVLLAGLACMYLMVKELAAVH*
Ga0137399_111813081	3300012203	Vadose Zone Soil	LLAEFSRLHRISVSLESGVLLAGLAALFFMVREAGIAR*
Ga0137362_107057221	3300012205	Vadose Zone Soil	TAADSPLLAEFGRLHRISASLEGGVILAGLAALYLMVKDSGVGN*
Ga0137362_108955882	3300012205	Vadose Zone Soil	LAEFSRLHRISASLEGGVILAGLAALYLMAKDSGVGS*
Ga0137376_117714501	3300012208	Vadose Zone Soil	AADSPLLAEFSRLHRISVSLESGVLLAGLVAMYLTVRDLAISQ*
Ga0137378_108463983	3300012210	Vadose Zone Soil	LLAEFGKLHRISVSLESGVLLAGFAAMYLMVRELASAR*
Ga0137384_102499491	3300012357	Vadose Zone Soil	PLLAEFGRLHRMSVTLESGVLLAGLAAMYFMVKDLAS*
Ga0137384_115725321	3300012357	Vadose Zone Soil	MGSIQATAADSPLLAEFGKLHRISVSLESGVLLAGFAAMYLMVRELASTR*
Ga0137360_107975482	3300012361	Vadose Zone Soil	TAEDSPLLAEFGRLHRVSASLEGAVLLAGFAALYLMVREFAAGK*
Ga0137360_117917992	3300012361	Vadose Zone Soil	GSIQAFQATAADSPLLAEFSRLHRISVSLESGVLLAGLAAMYLMAKDLGAIGK*
Ga0137390_109011482	3300012363	Vadose Zone Soil	FAEFRRLHQISVSLESGVLLAGFAALFLLVREVGVGR*
Ga0137390_111839722	3300012363	Vadose Zone Soil	AGNDPLLEEFSRLHRVSVTLESGVLLAGFAAMYFMVKELTSSR*
Ga0137358_103973272	3300012582	Vadose Zone Soil	VQATAADSPLLAEFGRLHRVSASLEGAVLLAGFAALYLMVKELAAGK*
Ga0137398_108473582	3300012683	Vadose Zone Soil	ADSPLLAEFSRLHRASVSLESAVLLAGLAAMYLMAKDLGAGH*
Ga0137395_104534612	3300012917	Vadose Zone Soil	QRTAADSPLLAEFGRLHRISASLEGGVILAGLAALYLMVKDSGVGN*
Ga0137396_103508861	3300012918	Vadose Zone Soil	TAADSPLLAEFSRLHRISVSLESGVLLAGFTAMYLTVRELGVGR*
Ga0137394_112783611	3300012922	Vadose Zone Soil	TAADSPSLAEFSKLHRISVSLESGVLLAGFVTMYLMVRELGAGR*
Ga0137413_117970741	3300012924	Vadose Zone Soil	SIQATAADSPLLAEFGRLHQISVSLESGVLLAGMACMFLMVRESVSAGS*
Ga0137419_110457702	3300012925	Vadose Zone Soil	PLLAEFGKLHRISVSLESGVLLAGFAAMFLMVRELSSVGR*
Ga0137419_110492341	3300012925	Vadose Zone Soil	IQATAADSPLLAEFGRLHRISVSLESGVLLAGLVALYLMVKELASGRG*
Ga0137404_120196061	3300012929	Vadose Zone Soil	IQATAADSPLLAEFGKLHRISVSLESGVLLAGLAAMYLMVKDLGVGQ*
Ga0137407_117046642	3300012930	Vadose Zone Soil	LLAEFGRLHQISVSLESGVLLAGMACMFLMVRESFRARN*
Ga0164301_113436332	3300012960	Soil	LAEFSKLHRISVSLESGVLLAGLAAMYLMVKELGAGR*
Ga0126369_107684191	3300012971	Tropical Forest Soil	NPLLVEFSRLHRISVSLESGVLLAGLAAMYLMAREL*
Ga0126369_131525071	3300012971	Tropical Forest Soil	AADSPHLGEFSRLHRVSVALESGVLIAGFAALYLLVRETLLNA*
Ga0134076_104975241	3300012976	Grasslands Soil	IQATAADSPLLAEFSRLHRISVTLESGVLLAGFAAMYLMVRELASTR*
Ga0134087_106913761	3300012977	Grasslands Soil	LLVEFGKLHRISVSLESGVLLAGLACIYLMVKELVTVG*
Ga0163162_117915442	3300013306	Switchgrass Rhizosphere	EATAEANPLLAEFARLHRLSVSLESGVLLAGLLGMYFMVSELGESR*
Ga0134079_106639263	3300014166	Grasslands Soil	SIQATAADSPLLAEFAKLHQVSVTLESGVLLAGIACMFLMVRELASK*
Ga0137411_10736541	3300015052	Vadose Zone Soil	DGADIQATAEDSPLLAEFGRLHRVSASLEGAVLLAGFAALYLMVREFAAGK*
Ga0137405_10976032	3300015053	Vadose Zone Soil	IQATAADSPLLAEFGKLHQISVTLESGVLLAGIACIFLMVRELATK*
Ga0137405_11193902	3300015053	Vadose Zone Soil	ATAADSPLLAEFGKLHQISVTLESGVLLAGIACIFLMVRELATK*
Ga0137418_105929922	3300015241	Vadose Zone Soil	AADSPLLAEFAKLHTVSVTLESGVLLAGIACVFLMVSESFGSGS*
Ga0137403_106998551	3300015264	Vadose Zone Soil	DSPLLAQFSRLHQISVSLESGVLLAGFAAMYLMVKELGAMGK*
Ga0187818_100456431	3300017823	Freshwater Sediment	ADSPLLAEFSRLHRISVVLESGVLLAGLAAMYLMVRELATRQ
Ga0187825_103096501	3300017930	Freshwater Sediment	QATAADNPLRVEFDRLHRRSVMLESGVLLAGFAAMFLLVKELGSIR
Ga0137408_14753571	3300019789	Vadose Zone Soil	DSPLLAEFGRLHQISVSLESGVLLAGMACMFLMVRESFRARN
Ga0210403_103914772	3300020580	Soil	EFSRLHTISVSLESGVLLAGIAAMYLMVRELTAGR
Ga0210403_109016781	3300020580	Soil	PLLAEFSRLHRISVLLESGVLLAGFAAMYLMVRELTVAGN
Ga0210399_115692732	3300020581	Soil	EFSRLHRISVSLESGVLLAGLAALYLMVRESAMAN
Ga0210395_111839801	3300020582	Soil	AAAADSPLLAGFSRLHTISVSLESGVLLAGFAAMYLMVRELAAGSR
Ga0179596_104747691	3300021086	Vadose Zone Soil	RAADSPLLAEFSRLHRISVSLESGVLLAGFVAMYLMVRELASLGH
Ga0210404_100104855	3300021088	Soil	AEFGRLHRISVSLESGVLLAGLAAMFLMVKELGTVQ
Ga0210406_109814192	3300021168	Soil	TAADSPLLAEFGRLHRISVSLESAVLLAGFLAMYGMVKEFGSAN
Ga0210400_109987581	3300021170	Soil	DSPLLAEFGRLHRISVSLESGVLLAGFAAVFLLVREVGLGR
Ga0210400_112406661	3300021170	Soil	SIQATAADNPLLVEFSRLHRISVSLESGVLLAGLVALYLMVRDVATARG
Ga0210405_100573045	3300021171	Soil	ADSPLLAEFGRLHRISVSLESGVLLAGLLALFLMVRELVAVH
Ga0210408_108076991	3300021178	Soil	LLAEFSRLHRISVSLESGVLLAGIAAMYLMVRELGAGS
Ga0210393_101015591	3300021401	Soil	GSIQATAAESPLLAEFSRLHSISVSLESGVLLAGITAMYFMVREFTAGR
Ga0210383_101581684	3300021407	Soil	PLLAEFGRLHGISVTLESGVLLAGIAAMYLMVRELMAGR
Ga0210394_1001189911	3300021420	Soil	GSIQATGADSPLLAEFSRLHTISVSLESGVLLAGIAAMCLMVRELTAGR
Ga0210384_108997011	3300021432	Soil	EFSRLHGISVSLESGVLLAGITAMYFMVREFTAGR
Ga0210390_103829021	3300021474	Soil	MGSIQATAADSPLLLEFSRWHRVSVSLESGVLLAGFLALYFMVREFGA
Ga0210390_114982061	3300021474	Soil	TAGDSPLLAEFGRLHGISVALESGVLLAGIGAMYLMVRELVAGR
Ga0210409_106126211	3300021559	Soil	QATGADSPLLAEFSRLHTVSVSLESGVLLAGFAAMYLMVRELVAGR
Ga0126371_117783842	3300021560	Tropical Forest Soil	AEFTRLHAISVSLESGVLLAALASMYLMVRELAAQA
Ga0224549_10171321	3300022840	Soil	GSIQATAADSPLLAEFSRLHRVSVSLESCVLLLGIAAMYLMVRELNARG
Ga0247695_10195742	3300024179	Soil	TAAGSPLLAEFGRMHRVSVGLESGVLLAGMAALFWMVKEAARQ
Ga0247690_10458551	3300024287	Soil	TAGDSPLLAEFNKLHSISVSLESGVLLAGFAAMYFMVRELAATH
Ga0209171_103455811	3300025320	Iron-Sulfur Acid Spring	PLLAEFSRLHSVSVSLESGVLLAGFAAMYLMVRELR
Ga0207711_108610912	3300025941	Switchgrass Rhizosphere	EFARLHRLSVSLESGVLLAGLLGMYFMVSELGESR
Ga0209238_11577222	3300026301	Grasslands Soil	GSIQATVADSPLLVEFSRLHRASVSLESGVLLAGLAAMYLMAKDLGAGH
Ga0209469_11448322	3300026307	Soil	LEFGRLHRISVSLESGVLLAGIAAMYLMVRELAFRSS
Ga0209153_11644811	3300026312	Soil	SPLLGEFSRLHRISVSLESGVLLAGIAAIYLMAKELTLIAS
Ga0209161_102754121	3300026548	Soil	ADSPMLFEFGRLHRISVSLESGVLLAGIAAMYLMVRELAFRSS
Ga0209648_105923271	3300026551	Grasslands Soil	TEKDSPLLAEFRRLHQISVSLESGVLLAGFAALFLLVREVGVGR
Ga0208606_1075791	3300027095	Forest Soil	ATAAESPLLTEFSRLHTISVSLESGVLLAGIAAMYFMVREFTAGP
Ga0208603_10675571	3300027109	Forest Soil	IQATAADSPLLAEFSRLHAISVSLESGVLLAGIAATYSIVRELAASQGFSR
Ga0209331_10846141	3300027603	Forest Soil	IQATAADSPLLAEFTRLHSISVSLESVVLLAGIAAMFLLVREVARLP
Ga0209388_11530282	3300027655	Vadose Zone Soil	SPLLAEFSKLHRISVSLESGVLLAGLAAMYLMVKELGAGR
Ga0209388_12099431	3300027655	Vadose Zone Soil	IQATAADSPLLAEFGRLHRISVSLESGVLLAGFAAMYLMVGELAARR
Ga0209588_11915431	3300027671	Vadose Zone Soil	DSPLLVEFSRLHRISVLLESGVLLAGFAAMYLMVRELTVAGN
Ga0209118_11351051	3300027674	Forest Soil	AQDSPLLAEFGRLHRISVLLESGVLLAGLGAMLFMVRELSQH
Ga0209118_11494312	3300027674	Forest Soil	MGSIQATAQDSPLLAEFARLHRISVSLESGVLLAGFAAIYLMIRELTVAGN
Ga0209073_102678212	3300027765	Agricultural Soil	EFTRLHAISVSLESGVLLAGIAAIYLMARELAIRPS
Ga0209655_102453582	3300027767	Bog Forest Soil	IQATAADSPLLAEFSRWHRVSVSLESGVLLAGFLALYFMVREFGA
Ga0209810_10390884	3300027773	Surface Soil	ATAADSPLLAQFGRLHGVSVTLESGVLLAGLAAMYLMVKELASGR
Ga0209139_100265191	3300027795	Bog Forest Soil	AATDSPLLAEFSRLHQISVSLESGVLLAGFAAMYLMVRELAAGR
Ga0209283_100319401	3300027875	Vadose Zone Soil	AAADSPLLAEFSRLHRVSVSLESGVLLAGIAAMYLMVKELKSGQ
Ga0209283_108915751	3300027875	Vadose Zone Soil	ATAEGSPLLAEFGRLHRISVSLESGVLLAGFAAMFLLVRELGIGR
Ga0209067_106263102	3300027898	Watersheds	PLLAEFSKLHKISISLESGVLLAGIAAMVLMVRELERMK
Ga0247684_10239433	3300028138	Soil	VSIQATAADSPLLAEFSKLHTISVSLESGVLLAGFLAVYLMVRELLVTR
Ga0247684_10504141	3300028138	Soil	TAVESPLLAEFSRLHTISVSLESGVLLAGIAAIYFLVGEIAAS
Ga0308309_114542441	3300028906	Soil	AAESPLLNEFSRLHSVSVSLESGVLLAGIAAVYLMVRELAVGR
Ga0302178_101439791	3300030013	Palsa	SIQATASGSPLLAEFTRLHGISVALESAVLLAGFAALYLLVREVSTPN
Ga0311355_108985452	3300030580	Palsa	MGSIQATAADSPLLAEFSRLHRVSVSLESCVLLLGIAAMYLMVRELNARG
Ga0265750_10004255	3300030813	Soil	ADNPLLAEFSRLHRISVSLESGVLLAGFAAMYLMVRELAAGSR
Ga0073994_100479882	3300030991	Soil	GEFGRLHRISVFLESGVLLAGFGAFYFMVRELSVGT
Ga0170834_1005862021	3300031057	Forest Soil	LAEFSRLHKISVSLESGVLLAGLAALFLFVRETTAGQ
Ga0265760_103366211	3300031090	Soil	SIQATAMDSPLMAEFSRLHGISVSLESGVLLAGFAAMYLMVRELAAGCR
Ga0307477_101524661	3300031753	Hardwood Forest Soil	PLLAEFGRLHRVSVLLESGVLLAGLAAIYFMVREFAAARN
Ga0307475_111682851	3300031754	Hardwood Forest Soil	DSPLLAEFNRWHRVSVRLEGGVLLAGLAAMYFLVKELGSAARA
Ga0307473_107065931	3300031820	Hardwood Forest Soil	AADSPLLAEFSRLHRISVSLESGVLLAGLAAMYLMVRELGAGR
Ga0310913_109712682	3300031945	Soil	STATDSPLLAEFARLHQISVSLESGVLLAGIACMYLMERELART
Ga0307479_118043792	3300031962	Hardwood Forest Soil	EFRRFHSISVSLESGVLLAGLAGIYLMVRELTTAVN
Ga0306924_111541651	3300032076	Soil	LAEFTRLHAISVSLESGVLLAGLAGIYSMTHELTAKI
Ga0307471_1000017761	3300032180	Hardwood Forest Soil	LVEFGKLHRVSVSLESGVLLAGFTAMFLMVRELSRVGR
Ga0307471_1013360792	3300032180	Hardwood Forest Soil	TAANSPLLAEFSRLHRLSVSLESGVLLAGLAALYLMVRELSLASK
Ga0307471_1026635252	3300032180	Hardwood Forest Soil	IQAFQEKAADSPLLAEFSKLHRISVSLESGVLLVGLAAMYFMIKDLAS
Ga0335081_104230121	3300032892	Soil	TDNPLLVAFMRLHQVSVLLESGVLLCGFAALYLMVRELALRG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F041949

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences