NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F041922

Metagenome / Metatranscriptome Family F041922

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F041922
Family Type Metagenome / Metatranscriptome
Number of Sequences 159
Average Sequence Length 48 residues
Representative Sequence MMAPAMMTNERKIWEAALLLVRRHGAAAAEIAQREAQRLRSGDDELTCVVW
Number of Associated Samples 140
Number of Associated Scaffolds 159

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 80.89 %
% of genes near scaffold ends (potentially truncated) 98.11 %
% of genes from short scaffolds (< 2000 bps) 90.57 %
Associated GOLD sequencing projects 133
AlphaFold2 3D model prediction Yes
3D model pTM-score0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (76.101 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(28.302 % of family members)
Environment Ontology (ENVO) Unclassified
(26.415 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(42.138 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 40.51%    β-sheet: 0.00%    Coil/Unstructured: 59.49%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.52
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 159 Family Scaffolds
PF02518HATPase_c 77.99
PF00313CSD 1.89
PF06736TMEM175 0.63
PF00271Helicase_C 0.63
PF01641SelR 0.63
PF01176eIF-1a 0.63

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 159 Family Scaffolds
COG0229Peptide methionine sulfoxide reductase MsrBPosttranslational modification, protein turnover, chaperones [O] 0.63
COG0361Translation initiation factor IF-1Translation, ribosomal structure and biogenesis [J] 0.63
COG3548Uncharacterized membrane proteinFunction unknown [S] 0.63


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A76.10 %
All OrganismsrootAll Organisms23.90 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000574|JGI1357J11328_10010277All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria5364Open in IMG/M
3300001334|A2165W6_1089499Not Available799Open in IMG/M
3300004082|Ga0062384_100080703All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1684Open in IMG/M
3300004092|Ga0062389_104129414Not Available546Open in IMG/M
3300004463|Ga0063356_101693981Not Available945Open in IMG/M
3300004633|Ga0066395_10398200Not Available775Open in IMG/M
3300004633|Ga0066395_10721968Not Available593Open in IMG/M
3300005171|Ga0066677_10293441All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria929Open in IMG/M
3300005175|Ga0066673_10116888Not Available1451Open in IMG/M
3300005363|Ga0008090_14987918All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria511Open in IMG/M
3300005436|Ga0070713_100178655Not Available1906Open in IMG/M
3300005446|Ga0066686_10815030Not Available620Open in IMG/M
3300005467|Ga0070706_100862672Not Available837Open in IMG/M
3300005535|Ga0070684_101411302Not Available656Open in IMG/M
3300005536|Ga0070697_101146841Not Available692Open in IMG/M
3300005538|Ga0070731_10073254All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2273Open in IMG/M
3300005541|Ga0070733_10633704All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria717Open in IMG/M
3300005542|Ga0070732_10717410Not Available609Open in IMG/M
3300005556|Ga0066707_10960610Not Available522Open in IMG/M
3300005561|Ga0066699_10406074Not Available975Open in IMG/M
3300005587|Ga0066654_10443253Not Available710Open in IMG/M
3300005764|Ga0066903_102633534Not Available975Open in IMG/M
3300006028|Ga0070717_11096933Not Available725Open in IMG/M
3300006058|Ga0075432_10394819Not Available596Open in IMG/M
3300006175|Ga0070712_100330444Not Available1242Open in IMG/M
3300006800|Ga0066660_11363102All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria555Open in IMG/M
3300006893|Ga0073928_11207675All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria509Open in IMG/M
3300006904|Ga0075424_101550507Not Available703Open in IMG/M
3300009012|Ga0066710_103914645Not Available558Open in IMG/M
3300009089|Ga0099828_11860509Not Available528Open in IMG/M
3300009177|Ga0105248_12627040Not Available574Open in IMG/M
3300010046|Ga0126384_12008116Not Available553Open in IMG/M
3300010335|Ga0134063_10764239Not Available504Open in IMG/M
3300010358|Ga0126370_12505636All Organisms → cellular organisms → Bacteria514Open in IMG/M
3300010358|Ga0126370_12558482Not Available510Open in IMG/M
3300010359|Ga0126376_12898813Not Available529Open in IMG/M
3300010360|Ga0126372_10063715All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2579Open in IMG/M
3300010361|Ga0126378_10150143All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → unclassified Xanthobacteraceae → Xanthobacteraceae bacterium2371Open in IMG/M
3300010361|Ga0126378_10232794Not Available1930Open in IMG/M
3300010366|Ga0126379_10042427All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales3675Open in IMG/M
3300010376|Ga0126381_100406766Not Available1897Open in IMG/M
3300010376|Ga0126381_101088227All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1154Open in IMG/M
3300010376|Ga0126381_105009747Not Available508Open in IMG/M
3300011106|Ga0151489_1007758Not Available595Open in IMG/M
3300011404|Ga0153951_1078628Not Available600Open in IMG/M
3300012201|Ga0137365_10645483Not Available775Open in IMG/M
3300012202|Ga0137363_10825491Not Available786Open in IMG/M
3300012203|Ga0137399_10828842Not Available779Open in IMG/M
3300012208|Ga0137376_10884317Not Available767Open in IMG/M
3300012208|Ga0137376_11561066Not Available551Open in IMG/M
3300012211|Ga0137377_11925262Not Available508Open in IMG/M
3300012357|Ga0137384_11393488Not Available549Open in IMG/M
3300012532|Ga0137373_10953522All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria625Open in IMG/M
3300012922|Ga0137394_11179595Not Available630Open in IMG/M
3300012923|Ga0137359_11556746Not Available549Open in IMG/M
3300012944|Ga0137410_11539644Not Available581Open in IMG/M
3300012944|Ga0137410_12095204Not Available504Open in IMG/M
3300014056|Ga0120125_1071194All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria785Open in IMG/M
3300014150|Ga0134081_10371815Not Available530Open in IMG/M
3300014501|Ga0182024_11850036Not Available673Open in IMG/M
3300014657|Ga0181522_10634295Not Available650Open in IMG/M
3300014969|Ga0157376_11604728All Organisms → cellular organisms → Bacteria685Open in IMG/M
3300014969|Ga0157376_12241012Not Available585Open in IMG/M
3300016357|Ga0182032_10599681All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria916Open in IMG/M
3300016422|Ga0182039_10837238Not Available818Open in IMG/M
3300016445|Ga0182038_10186679Not Available1619Open in IMG/M
3300017822|Ga0187802_10223256Not Available726Open in IMG/M
3300017943|Ga0187819_10664659Not Available588Open in IMG/M
3300017943|Ga0187819_10713295Not Available565Open in IMG/M
3300017972|Ga0187781_10810018Not Available680Open in IMG/M
3300017972|Ga0187781_11261437Not Available544Open in IMG/M
3300018006|Ga0187804_10199469Not Available854Open in IMG/M
3300018061|Ga0184619_10114818Not Available1216Open in IMG/M
3300018088|Ga0187771_11880937Not Available508Open in IMG/M
3300020579|Ga0210407_10402210Not Available1071Open in IMG/M
3300020579|Ga0210407_11166725Not Available581Open in IMG/M
3300021401|Ga0210393_11589306Not Available519Open in IMG/M
3300021402|Ga0210385_11057284All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria623Open in IMG/M
3300021403|Ga0210397_11243671Not Available579Open in IMG/M
3300021404|Ga0210389_11169859Not Available593Open in IMG/M
3300021407|Ga0210383_11358547All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales592Open in IMG/M
3300021432|Ga0210384_10822142Not Available827Open in IMG/M
3300021444|Ga0213878_10202243All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria836Open in IMG/M
3300021476|Ga0187846_10021096All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3015Open in IMG/M
3300021559|Ga0210409_10339131Not Available1352Open in IMG/M
3300021560|Ga0126371_11849545Not Available724Open in IMG/M
3300021953|Ga0213880_10229200Not Available529Open in IMG/M
3300022563|Ga0212128_10814738Not Available554Open in IMG/M
3300025664|Ga0208849_1039641Not Available1468Open in IMG/M
3300025915|Ga0207693_10985950Not Available644Open in IMG/M
3300025929|Ga0207664_10662367Not Available938Open in IMG/M
3300025941|Ga0207711_10896292Not Available825Open in IMG/M
3300025990|Ga0208527_1035590All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria610Open in IMG/M
3300026023|Ga0207677_12193312Not Available514Open in IMG/M
3300026035|Ga0207703_12246295Not Available521Open in IMG/M
3300026088|Ga0207641_11924796Not Available593Open in IMG/M
3300026340|Ga0257162_1026141Not Available711Open in IMG/M
3300026529|Ga0209806_1070398All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1576Open in IMG/M
3300027063|Ga0207762_1045943Not Available645Open in IMG/M
3300027074|Ga0208092_103610Not Available902Open in IMG/M
3300027605|Ga0209329_1056629Not Available840Open in IMG/M
3300027729|Ga0209248_10190622Not Available606Open in IMG/M
3300027842|Ga0209580_10377430Not Available707Open in IMG/M
3300027874|Ga0209465_10289496Not Available820Open in IMG/M
3300027875|Ga0209283_10809803Not Available575Open in IMG/M
3300028747|Ga0302219_10131446Not Available955Open in IMG/M
3300028906|Ga0308309_11098914All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales687Open in IMG/M
3300029993|Ga0302304_10213446Not Available715Open in IMG/M
3300031231|Ga0170824_102634538Not Available663Open in IMG/M
3300031525|Ga0302326_13141204Not Available559Open in IMG/M
3300031545|Ga0318541_10060395Not Available1968Open in IMG/M
3300031561|Ga0318528_10404261All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales733Open in IMG/M
3300031573|Ga0310915_10235339Not Available1287Open in IMG/M
3300031573|Ga0310915_10301565All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1132Open in IMG/M
3300031670|Ga0307374_10043556All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales4817Open in IMG/M
3300031680|Ga0318574_10102838Not Available1586Open in IMG/M
3300031681|Ga0318572_10232007Not Available1083Open in IMG/M
3300031681|Ga0318572_10623636Not Available642Open in IMG/M
3300031713|Ga0318496_10137040Not Available1331Open in IMG/M
3300031723|Ga0318493_10705708Not Available566Open in IMG/M
3300031724|Ga0318500_10378493Not Available702Open in IMG/M
3300031751|Ga0318494_10017527All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales3499Open in IMG/M
3300031751|Ga0318494_10813694Not Available547Open in IMG/M
3300031754|Ga0307475_10029266All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales3977Open in IMG/M
3300031764|Ga0318535_10328696Not Available684Open in IMG/M
3300031768|Ga0318509_10069937All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1839Open in IMG/M
3300031770|Ga0318521_10402505Not Available816Open in IMG/M
3300031781|Ga0318547_10359594Not Available890Open in IMG/M
3300031782|Ga0318552_10109099All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1371Open in IMG/M
3300031797|Ga0318550_10591238Not Available533Open in IMG/M
3300031799|Ga0318565_10058687Not Available1800Open in IMG/M
3300031819|Ga0318568_10205079Not Available1216Open in IMG/M
3300031890|Ga0306925_10056474All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD00884102Open in IMG/M
3300031896|Ga0318551_10122787Not Available1400Open in IMG/M
3300031910|Ga0306923_11453683Not Available719Open in IMG/M
3300031941|Ga0310912_10523915Not Available923Open in IMG/M
3300031942|Ga0310916_10032288All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales3855Open in IMG/M
3300031947|Ga0310909_10665053Not Available867Open in IMG/M
3300031954|Ga0306926_10445630Not Available1595Open in IMG/M
3300032001|Ga0306922_10600635Not Available1166Open in IMG/M
3300032001|Ga0306922_11788699Not Available605Open in IMG/M
3300032039|Ga0318559_10104488Not Available1257Open in IMG/M
3300032052|Ga0318506_10140558Not Available1053Open in IMG/M
3300032055|Ga0318575_10201708Not Available999Open in IMG/M
3300032059|Ga0318533_11122522Not Available576Open in IMG/M
3300032060|Ga0318505_10010677All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3294Open in IMG/M
3300032063|Ga0318504_10092960All Organisms → cellular organisms → Bacteria1341Open in IMG/M
3300032174|Ga0307470_11577833Not Available548Open in IMG/M
3300032892|Ga0335081_10702016All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1227Open in IMG/M
3300032892|Ga0335081_10934413Not Available1018Open in IMG/M
3300032896|Ga0335075_10604818Not Available1083Open in IMG/M
3300032954|Ga0335083_10960416Not Available675Open in IMG/M
3300033134|Ga0335073_10367320Not Available1697Open in IMG/M
3300033134|Ga0335073_12133587Not Available506Open in IMG/M
3300033289|Ga0310914_10003016All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria11541Open in IMG/M
3300033289|Ga0310914_10587862All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1004Open in IMG/M
3300033290|Ga0318519_10449945Not Available771Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil28.30%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil8.80%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil7.55%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil5.03%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.77%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil3.77%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.77%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil3.14%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment2.52%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil2.52%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil1.89%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.89%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa1.89%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.26%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost1.26%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.26%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.26%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.26%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.26%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.26%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.26%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.26%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog0.63%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater0.63%
Thermal SpringsEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs0.63%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring0.63%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.63%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.63%
Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil0.63%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil0.63%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.63%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.63%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil0.63%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost0.63%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil0.63%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.63%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.63%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil0.63%
BiofilmEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm0.63%
Exposed RockEnvironmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock0.63%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.63%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.63%
Attine Ant Fungus GardensHost-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens0.63%
Tropical Rainforest SoilEnvironmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil0.63%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000574Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 mEnvironmentalOpen in IMG/M
3300001334Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A21-65cm)- 6 month illuminaEnvironmentalOpen in IMG/M
3300004082Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004633Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBioEnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005363Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005538Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1EnvironmentalOpen in IMG/M
3300005541Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1EnvironmentalOpen in IMG/M
3300005542Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1EnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005587Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006058Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1Host-AssociatedOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006893Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaGEnvironmentalOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300011106Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011404Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ035 MetaGHost-AssociatedOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012532Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014056Permafrost microbial communities from Nunavut, Canada - A20_5cm_0MEnvironmentalOpen in IMG/M
3300014150Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014657Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaGEnvironmentalOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300016445Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108EnvironmentalOpen in IMG/M
3300017822Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2EnvironmentalOpen in IMG/M
3300017943Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4EnvironmentalOpen in IMG/M
3300017972Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300018006Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4EnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018088Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MGEnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021402Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-OEnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021404Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021444Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02EnvironmentalOpen in IMG/M
3300021476Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)EnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300021953Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R07EnvironmentalOpen in IMG/M
3300022563OV2_combined assemblyEnvironmentalOpen in IMG/M
3300025664Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 deep-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025990Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_80N_102 (SPAdes)EnvironmentalOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026340Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-AEnvironmentalOpen in IMG/M
3300026355Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-AEnvironmentalOpen in IMG/M
3300026529Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)EnvironmentalOpen in IMG/M
3300027063Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 37 (SPAdes)EnvironmentalOpen in IMG/M
3300027074Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF014 (SPAdes)EnvironmentalOpen in IMG/M
3300027605Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027729Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)EnvironmentalOpen in IMG/M
3300027842Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027874Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028747Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300029993Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_2EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031525Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3EnvironmentalOpen in IMG/M
3300031545Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26EnvironmentalOpen in IMG/M
3300031561Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26EnvironmentalOpen in IMG/M
3300031573Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111EnvironmentalOpen in IMG/M
3300031670Soil microbial communities from Risofladan, Vaasa, Finland - OX-3EnvironmentalOpen in IMG/M
3300031680Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22EnvironmentalOpen in IMG/M
3300031681Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20EnvironmentalOpen in IMG/M
3300031713Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22EnvironmentalOpen in IMG/M
3300031723Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23EnvironmentalOpen in IMG/M
3300031724Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20EnvironmentalOpen in IMG/M
3300031751Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031764Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27EnvironmentalOpen in IMG/M
3300031768Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22EnvironmentalOpen in IMG/M
3300031770Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17EnvironmentalOpen in IMG/M
3300031781Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20EnvironmentalOpen in IMG/M
3300031782Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20EnvironmentalOpen in IMG/M
3300031797Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23EnvironmentalOpen in IMG/M
3300031799Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21EnvironmentalOpen in IMG/M
3300031819Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031896Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031941Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080EnvironmentalOpen in IMG/M
3300031942Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032039Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21EnvironmentalOpen in IMG/M
3300032052Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19EnvironmentalOpen in IMG/M
3300032055Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23EnvironmentalOpen in IMG/M
3300032059Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27EnvironmentalOpen in IMG/M
3300032060Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18EnvironmentalOpen in IMG/M
3300032063Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300032896Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4EnvironmentalOpen in IMG/M
3300032954Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2EnvironmentalOpen in IMG/M
3300033134Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2EnvironmentalOpen in IMG/M
3300033289Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108EnvironmentalOpen in IMG/M
3300033290Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI1357J11328_1001027773300000574GroundwaterMMMTNERKIWEAALLLVRRHGAEAALIAEREAERLRTADDELTCVVWCWIA
A2165W6_108949913300001334PermafrostMMTNERKIWEAALLLVRRHGSDAAAIAEREAERLRDSDELTC
Ga0062384_10008070313300004082Bog Forest SoilMVGPMMMMTNERKIWEAALLLVRRHGAAAAEIAHREALRLRSGDDELTCVVWCWI
Ga0062389_10412941413300004092Bog Forest SoilMVMTMMTNERKIWEAALLLVRRHGAAAAAVAQREAQSLRASNDELTCVVWCWIARSTAE
Ga0063356_10169398123300004463Arabidopsis Thaliana RhizosphereMMTNERKIWEAALLLVRRHGDDAVAIAEREAERLKGGDDELTCV
Ga0066395_1039820013300004633Tropical Forest SoilMTPATMTNERKIWEAVLLLVRRHGSAAAEIAQREAQRLRNNDDELTCVVWCWIARSTAE
Ga0066395_1072196813300004633Tropical Forest SoilMMAPRMMTNERKIWEAALLLVRRHGAAAAEIAQAEAQRLRSGDDELTCVVWCWIAR
Ga0066677_1029344113300005171SoilMMTPAMMTNERKIWEAVLLLVRRHGAAAAEIAHREAQRLRSDDDELTCVVWCWIARST
Ga0066673_1011688813300005175SoilMMTPAMMTNERKIWEAVLLLVRRHGAAAAEIAHREAQRLRSDDDELTCVVWCWIARSTA
Ga0008090_1498791823300005363Tropical Rainforest SoilMMMTNERKIWEAALLLVRRHGAAAAEIAQAEALRFRRGDDELTCVVWCWIA
Ga0070713_10017865513300005436Corn, Switchgrass And Miscanthus RhizosphereMMTSMMTMTNERKIWEAALLLVRRHGAAAAEIAQQEAQRLRSGDDELTCVVWCWIAR
Ga0066686_1081503023300005446SoilMMAPTMMTNERKIWEAALLLVRRHGAAAAHIAQQEVQRLRSEDDELTCVVWCWIARSTA
Ga0070706_10086267213300005467Corn, Switchgrass And Miscanthus RhizosphereMMAPTMMTNERKIWEAALLLVRRHGAAAAQIAQQEVQRLRSS
Ga0070684_10141130223300005535Corn RhizosphereMMMTNERKIWEAALLLVRRHGSDAVAIAEREAERLKGGDDELTCVVWCWIARST
Ga0070697_10114684113300005536Corn, Switchgrass And Miscanthus RhizosphereMMTPAMMTNERKIWEAALLLVRRHGAAAAEIAQREAQRLRSSDDELTCVVWCWIAR
Ga0070731_1007325413300005538Surface SoilMMMTNERKIWEAAMLLVRRHGSDAVAVAEGEVERLRGDDVLTCVVW
Ga0070733_1063370413300005541Surface SoilMMRDTTMMTNERKIWEAALLLVRQHGAEAAEVARREAQRLRGEDDELTRVVWCWIARSTA
Ga0070732_1071741023300005542Surface SoilMMMTSTMTNERKIWEAALLLVRRHGNEAVAVAEREAERLKRDDDELTCVVWCWIAR
Ga0066707_1096061023300005556SoilMMMTNERKIWEAALLLVRRHGADAVSIAEREAERLRSGDDELTCVVWCWIARST
Ga0066699_1040607413300005561SoilMMMTNERKIWEAALLLVRRHGSEAVGIAEREAERFRGGDDELTCVVWCWIAR
Ga0066654_1044325313300005587SoilMMMTNERKIWEAALLLVRRHGNEAAVIAEREAERLKSSDDELTCVVWCWIAR
Ga0066903_10263353413300005764Tropical Forest SoilMMTPAMMTNERKIWEAALLLVRRHGAAAVEIAHREAQRLRTGDDELTCVVWCWIARS
Ga0070717_1109693323300006028Corn, Switchgrass And Miscanthus RhizosphereMMMTNERKIWEAALLLVRRHGAEAATIAEREAERLKSGDDELTCVVWCWIARSTAE
Ga0075432_1039481923300006058Populus RhizosphereMMTNERKIWEAALLLVRRHGNEAVVIAEQEAERLRGEDDELTCVVWCW
Ga0070712_10033044413300006175Corn, Switchgrass And Miscanthus RhizosphereMMMTNERKIWEAALLLVRRHGSEAVGIAEREAERFRGGDDE
Ga0066660_1136310213300006800SoilMMMTNERKIWEAALLLVRRHGSDAVSIAEREAERLKGGDDE
Ga0073928_1120767513300006893Iron-Sulfur Acid SpringMMTSNQMTNERKIWEAALMLVRRHGSDALQVAEREAERLRTGNDELSCIVWCWI
Ga0075424_10155050713300006904Populus RhizosphereMMIPAMMTNERKIWEAALLLVRRHGAAAAEIAHREAQRLRSGDDELTCVVWCWIA
Ga0066710_10391464523300009012Grasslands SoilMMTTMMTNERKIWEAALLLVRRHGSDAVAIAEREAER
Ga0099828_1186050913300009089Vadose Zone SoilMMMMMTNERKIWEAALLLVRRHGAEAVSIAEREAERLRRGDDE
Ga0105248_1262704013300009177Switchgrass RhizosphereMMMTNERKIWEAALLLVRRHGGDAVAIAEREAERLKG
Ga0126384_1200811613300010046Tropical Forest SoilMMAPAMMTNERKIWEAALLLVRRHGAAAAEIAQREAQRLRSGDDELTCVVW
Ga0134063_1076423923300010335Grasslands SoilMMMTNERKIWEAALLLVRRHGSEAVGIAEREAERFRGGDD
Ga0126370_1250563623300010358Tropical Forest SoilMMTPMMMTNERKIWEAALLLVRRHGAAAAEIAQKEAQRLRSSDDELTCVVWCWIARS
Ga0126370_1255848223300010358Tropical Forest SoilMMTNERKIWEAALLLVRRHGAAAAEIAQAEAQRLRSGDDEL
Ga0126376_1289881313300010359Tropical Forest SoilMMDAMMMTNERKIWEAALLLVRRHGAAAAQIAQQEVQRL
Ga0126372_1006371513300010360Tropical Forest SoilMITSTMMMTNERKIWEAALLLVRRHGAAAAEIAQREAQRLRTADDE
Ga0126378_1015014323300010361Tropical Forest SoilMMSRMMMMTNERKIWEAALLLVRRHGAAAAEIAHREAQR
Ga0126378_1023279423300010361Tropical Forest SoilMTPAMMTNERKIWEAVLLLVRRHGAAAVEIAHREAQRLRTGDDELTCVVW
Ga0126379_1004242753300010366Tropical Forest SoilMTNERKIWEAVLLLVRRHGAAAAEIAQREAQRLRNNDDELTCVVWCWIARSTAEL
Ga0126381_10040676613300010376Tropical Forest SoilMITPIMMTNERKIWEAALLLVRRHGAAAAEIAQREAQRLRSSDDELTCVVWCWIAR
Ga0126381_10108822713300010376Tropical Forest SoilMMMTNDRKIWEAALLLVRRHGNEAAAIAEREAERLRAGDDELTCVV
Ga0126381_10500974723300010376Tropical Forest SoilMMTAAMMTNERKIWEAVLLLVRRHGAAAAEIAHREAQRLRSGDDELTCVVWCW
Ga0151489_100775823300011106SoilMMMTNERKIWEAALLLVRRHGSDAAAIAEREAERLRGND
Ga0153951_107862813300011404Attine Ant Fungus GardensMMMTNERKIWEAALMLVRRHGSDALHVAEREAERLRTDNDELSCIVWCW
Ga0137365_1064548323300012201Vadose Zone SoilMMTPAMMTNERKIWEAALLLVRRHGAAAAEIAHREAQRLRSGDDELTCVVWCWI
Ga0137363_1082549113300012202Vadose Zone SoilMMAPTMMTNERKIWEAALLLVRRHGAAAAQIAQQEVQRLRSGDDELTCV
Ga0137399_1082884213300012203Vadose Zone SoilMMAPMMMTNERKIWEAALLLVRRHGAAAAAIAQQEVQRWRSSDDELTCVVWCWIARSTAE
Ga0137376_1088431713300012208Vadose Zone SoilMMMMTNERKIWEAALLLVRRHGAEAVSIAEREAERLRSGDDEL
Ga0137376_1156106613300012208Vadose Zone SoilMMAPMMMTNERKIWEAALLLVRRHGAEAAEIARQEVQRLQSGDDELTC
Ga0137377_1192526223300012211Vadose Zone SoilMMTPAMMTNERKIWEAALLLVRRHGAAAAEIAHREAQRLRSGDDELTCVVW
Ga0137384_1139348813300012357Vadose Zone SoilMMMTNERKIWEAAMLLVRRHGSEAVAVAEHEAERLRGDGDDALTCV
Ga0137373_1095352213300012532Vadose Zone SoilMMMTNERKIWEAAMLLVRRHGSDAVAVAENEAERLRGDDA
Ga0137394_1117959523300012922Vadose Zone SoilMMAPMMMTNERKIWEAALLLVRRHGAAAAAIAQQEVQRWR
Ga0137359_1155674623300012923Vadose Zone SoilMMAPTMMTNERKIWEAALLLVRRHGAAAAQIAQQEVQRLRSGDDELTCVVWCWIARS
Ga0137410_1153964413300012944Vadose Zone SoilMMTDGQMTNERKIWEAALMLVRRHGSDALQVAEREAERLRTGDDELSCIVWC
Ga0137410_1209520413300012944Vadose Zone SoilMMTNERKIWEAALLLVRRHGNQAVLIAEQEAERLRGEDDELTCVVW
Ga0120125_107119423300014056PermafrostMMMTNDRKIWEAAMLLVRRHGSDAVAVAENEAERLRDDDALT
Ga0134081_1037181523300014150Grasslands SoilMMMTNERKIWEAALLLVRRHGAEAVTVAEREAERLRGGDDELTCVVWCWIAR
Ga0182024_1185003613300014501PermafrostMMTNERKIWEAALMLVRRHGSEALRVAEREAERLRTGDDELSCIVWCWIARSTA
Ga0181522_1063429523300014657BogMMTNERKIWEAALLLVRRHGSEALHVAEREAERLRTGD
Ga0157376_1160472813300014969Miscanthus RhizosphereMMMTNERKIWEAALLLVRRHGAEAVTIAEREAERLKGGD
Ga0157376_1224101213300014969Miscanthus RhizosphereMMTPSMMTNERKIWEAVLLLIRRHGAAAAEIAHREAQRLRSGEDELTCVVWCW
Ga0182032_1059968123300016357SoilMMSRMMMMTNERKIWEAALLLVRRHGAAAAEIAQREAQRLRRSDDEL
Ga0182039_1083723813300016422SoilMMSRMMMMTNERKIWEAALLLVRRHGAAAAEIAQREAQRLRRSD
Ga0182038_1018667923300016445SoilMMSRMMMMTNERKIWEAALLLVRRHGAAAAEIAQREALRLRRSDDELTCVVWCWIARST
Ga0187802_1022325623300017822Freshwater SedimentMMTNERKIWEAALMLVRRHGSEALQVAEREAERLRSGDDELSCIVWCWIAR
Ga0187819_1066465913300017943Freshwater SedimentMMTNERKIWEAALMLVRRHGSEALNVAEKEAERLRTGNDELSCIVWCWIARSTAELLRP
Ga0187819_1071329523300017943Freshwater SedimentMMTDGQMTNERKIWEAALMLVRRHGSEALQVAEREAERLR
Ga0187781_1081001823300017972Tropical PeatlandMMTNERKIWEAALMLVRRHGAEAPVIAEREARRLRSGGDELTCVVWCWI
Ga0187781_1126143723300017972Tropical PeatlandMMTSGQMTNERKIWEAALLLVRRHGSKALKVAEEEAERLRTGDDELSCIVWCWIARS
Ga0187804_1019946923300018006Freshwater SedimentMMTPMMMTNERKIWEAALLLVRRHGAAAAEIAQREALRLRSGDDELTCVVWCWIARS
Ga0184619_1011481813300018061Groundwater SedimentMMMTNERKIWEAALLLVRRHGAEAVGIAEREAERFRGGD
Ga0187771_1188093713300018088Tropical PeatlandMMTNERKIWEAALMLVRRHGSEALKVAEKEAERLRSGNDELSCIVWCWIA
Ga0210407_1040221013300020579SoilMMSRMMTMTNERKIWEAALLLVRRHGAAAAEVAQREAQRLRGNDDELTCVVWCWIARSTA
Ga0210407_1116672523300020579SoilMMTNERKIWEAALMLVRRHGSDALQVAEREAERLRTGD
Ga0210393_1158930613300021401SoilMTNERKIWEAALLLVRRHGAAAAEIAQREAQRLRGNDDELTC
Ga0210385_1105728413300021402SoilMMTDGQMTNERKIWEAALMLVRRHGSEALQVAEREAERLRTGDD
Ga0210397_1124367113300021403SoilMMIPATMTNERKIWEAALLLVRRHGAAAAEIAHREAQRLRRGDDELTCVVWCWIA
Ga0210389_1116985913300021404SoilMMTNERKIWEAALMLVRRHGSDALQVAEREAERLRTGDDELS
Ga0210383_1135854713300021407SoilMMTNGQMTNERKIWEAALMLVRRHGSEALQVAEREAERL
Ga0210384_1082214223300021432SoilMMTNERKIWEAALLLVRRHGAAAADIAQREAQRLRRGDDELTC
Ga0213878_1020224313300021444Bulk SoilMMMTNERKIWEAALLLVRRHGAAAAEIAQREAQRLRTSEDE
Ga0187846_1002109643300021476BiofilmMMMTNERKIWEAALLLVRRHGAAAAKIAQAEALRFRRGDDELTCVVWCWIARSTAE
Ga0210409_1033913113300021559SoilMMTNERKIWEAALMLVRRHGSEALQVAEREAERLRTGDDELS
Ga0126371_1184954513300021560Tropical Forest SoilMMSRMMMMTNERKIWEAALLLVRRHGAAAAEIAQQ
Ga0213880_1022920013300021953Exposed RockMMTNERKIWEAALMLVRRHGSDALQVAEREAERLRTGDDELSCIVWCWIARSTAE
Ga0212128_1081473823300022563Thermal SpringsMLYTDAMTNERKIWEAALLLVRRHGSKAVEIAEGEAERLRRSDDELTCVVWCWIARSTAE
Ga0208849_103964113300025664Arctic Peat SoilMMTNERKIWEAALMLVRRHGSEALRVAEREAERLRTDDDELSCIV
Ga0207693_1098595013300025915Corn, Switchgrass And Miscanthus RhizosphereMMMTNERKIWEAALLLVRRHGSEAVGIAEREAERFRGGDDELT
Ga0207664_1066236723300025929Agricultural SoilMMMTNERKIWEAALLLVRRHGAEAATIAEREAERLKSGDDE
Ga0207711_1089629223300025941Switchgrass RhizosphereMMMTNERKIWEAALLLVRRHGGDAVAIAEREAERLK
Ga0208527_103559013300025990Rice Paddy SoilMMTNERKIWEATLLLVRRHGVEALEIAQREAQRLRSGDDELTCVVWCWIAR
Ga0207677_1219331213300026023Miscanthus RhizosphereMMMTNERKIWEAALLLVRRHGGDAVAIAEREAERL
Ga0207703_1224629513300026035Switchgrass RhizosphereMMMTNERKIWEAALLLVRRHGGDAVAIAEREAERLKGG
Ga0207641_1192479623300026088Switchgrass RhizosphereMMMTNERKIWEAALLLVRRHGAEAVTVAEREAERL
Ga0257162_102614113300026340SoilMTPAMMTNERKIWEAALLLVRRHGAAAAEIAHREAQRLRSSDDELTCV
Ga0257149_104767323300026355SoilMMAPTMMTNERKIWEAALLLVRRHGAAAAEIAHRE
Ga0209806_107039823300026529SoilMMMTNERKIWEAALLLVRRHGAEAVTVAEREAERLRGGDDEL
Ga0207762_104594313300027063Tropical Forest SoilMTQMMMTNERKIWEAALLLVRRHGAAAAEVAQREAQRLRSGDDELTCVVWCWIARST
Ga0208092_10361013300027074Forest SoilMMTPAMTNERKIWEAVLLLVRRHGAAAAEIAHREAQRLRSDDDELTCVVWCW
Ga0209329_105662923300027605Forest SoilMMMTNERKIWEAALLLVRRHGSEAVGIAEREAERFRGGDDELTCVV
Ga0209248_1019062223300027729Bog Forest SoilMVVMTTMTNERKIWEAALLLVRRHGAAAAEVAQREAQRLRNGDDALTCV
Ga0209580_1037743013300027842Surface SoilMMMTSTMTNERKIWEAALLLVRRHGNEAVAVAEREAERLKRDDDELTCVVWCWIARST
Ga0209465_1028949623300027874Tropical Forest SoilMMSSTMMMTNERKIWEAALLLVRRHGAAAAEIAHREAQRLRTEDDELTCVVWC
Ga0209283_1080980313300027875Vadose Zone SoilMQMMTNERKIWEAALLLVRRHGDDAVAIAEREAERLRDDDDELTCV
Ga0302219_1013144613300028747PalsaMMTNERKIWEAALMLVRRHGSDALHVAEREAERLRTGNDELSCIVWCWIARS
Ga0308309_1109891413300028906SoilMMTNERKIWEAALMLVRRHGSEALRVAEREAERLRVDDDELSCIVWCWIARSTAE
Ga0302304_1021344623300029993PalsaMMTNERKIWEAALMLVRRHGSDALHVAEREAERLRTGNDELSCIVWCWI
Ga0170824_10263453813300031231Forest SoilMMTNERKIWEAAMLLVRRHGSDAVAVAENEAERLRD
Ga0302326_1314120413300031525PalsaMMTNERKIWEAALMLVRRHGSDALHVAEREAERLRTDK
Ga0318541_1006039523300031545SoilMMSRMMMMTNERKIWEAALLLVRRHGAAAAEIAQREAQRLRRSDDELTCVVW
Ga0318528_1040426113300031561SoilMMSRMVTMTNERKIWEAALLLVRRHGAAAAEIAQREAQRLRRSDDELTCVVWCW
Ga0310915_1023533913300031573SoilMMMTNERKIWEAALLLVRRHGAAAAEIAQAEALRFRRGDDELTCVVWCWIARSTA
Ga0310915_1030156513300031573SoilMMSRMMMMTNERKIWEAALLLVRRHGAAAAEIAQREAQRLRRSDDE
Ga0307374_1004355663300031670SoilMMTEQLMTNERKIWEAALLLVRRHGADAVSIAEREAERLRGGDDDLTCVVWCWIARSTA
Ga0318574_1010283823300031680SoilMMTLAMMTNERKIWEAALLLVRRHGAAAAEIAHREAQRLRSGDDELTCVVWCW
Ga0318572_1023200723300031681SoilMMSPMMMTNERKIWEAALLLVRRHGAAAAEIAQAEAQRFRRGDDELTCVVWCW
Ga0318572_1062363613300031681SoilMMSRMMMMTNERKIWEAALLLVRRHGAAAAEIAQREAQRLRRSDDELTCVVWCW
Ga0318496_1013704013300031713SoilMMSRMMMMTNERKIWEAALLLVRRHGAAAAEIAQREAQRLRRSDDELTCVV
Ga0318493_1070570823300031723SoilMVMAMMTNERKIWEAALLLVRRHGAAAAVVAQREAQRLRKSDDELTCVVWCW
Ga0318500_1037849323300031724SoilMMSPMMMTNERKIWEAALLLVRRHGAAAAEIAQAEAQRFRRGDDELTC
Ga0318494_1001752753300031751SoilMMAPTMMTNERKIWEAALLLVRRHGAAAAEIAQREAQRLRSGDDELTCVVWC
Ga0318494_1081369413300031751SoilMMMTNERKIWEAALLLVRRHGAAAAEIAHAEALRFRRGDDELTCVVWCW
Ga0307475_1002926653300031754Hardwood Forest SoilMMTNERKIWEAALLLVRRHGAAAAEVAHREAQRLRRNDDELT
Ga0318535_1032869613300031764SoilMMSRMMMMTNERKIWEAALLLVRRHGAAAAEIAQREALRLRRSDDELTCVVWCW
Ga0318509_1006993723300031768SoilMMSRMMTMTNERKIWEAALLLVRRHGAAAAEIAQREAQRFRRSDDELTCVVWCW
Ga0318521_1040250513300031770SoilMTPMMMTNERKIWEAALLLVRRHGAAAAEIAQREAQRLRSGDD
Ga0318547_1035959423300031781SoilMMSRMMMMTNERKIWEAALLLVRRHGAAAAEIAQREAQ
Ga0318552_1010909923300031782SoilMMSRMMTMTNERKIWEAALLLVRRHGAAAAEIAQREAQRFRRSDDELTCVV
Ga0318550_1059123823300031797SoilMMSRMMMMTNERKIWEAALLLVRRHGAAAAEIAQREAQRFRRSD
Ga0318565_1005868723300031799SoilMMAPTMMTNERKIWEAALLLVRRHGAAAAEIAQREAQRLRSGDDELTCVVWCW
Ga0318568_1020507923300031819SoilMMSRMMMMTNERKIWEAALLLVRRHGAAAAEIAQREALRLR
Ga0306925_1005647413300031890SoilMMMTNERKIWEAALLLVRRHGAAAAEIAQAEALRFRRGD
Ga0318551_1012278713300031896SoilMMSRMMMMTNERKIWEAALLLVRRHGAAAAEIAQREAQRLRRSDD
Ga0306923_1145368313300031910SoilMMMTNERKIWEAALLLVRRHGAAAAEIAQAEALRFRRGDDEL
Ga0310912_1052391513300031941SoilMMSRMMMMTNERKIWEAALLLVRRHGAAAAEIAQREAQR
Ga0310916_1003228853300031942SoilMMSRMMMMTNERKIWEAALLLVRRHGAAAAEIAQREA
Ga0310909_1051779323300031947SoilMMPRMMTMTNERKIWEAALLLVRRHGAAAAEIAQREAQRLRGND
Ga0310909_1066505313300031947SoilMMSRMMMMTNERKIWEAALLLVRRHGAAAAEIAQREAQRLRRSDDELTCVVWCWIARSTA
Ga0306926_1044563013300031954SoilMMSRMMMMTNERKIWEAALLLVRRHGAAAAEIAQREAQRLRRSDDELTCV
Ga0306922_1060063513300032001SoilMITSMMTNERKIWEAALLLVRRHGVAAAEIAHREAQRLRSSDDELTCV
Ga0306922_1178869913300032001SoilMMSRMMTMTNERKIWEAALLLVRRHGAAAAEIAQREAQRLRGNDDELTCV
Ga0318559_1010448823300032039SoilMMTQMMMTNERKIWEAALLLVRRHGAAAAEVAQREAQRLRSGDDELTCVVWCW
Ga0318506_1014055813300032052SoilMMSRMMMMTNERKIWEAALLLVRRHGAAAAEIAQREALRLRRS
Ga0318575_1020170823300032055SoilMMSRMMMMTNERKIWEAALLLVRRHGAAAAEIAQREAQRLRRSDDELTCVVWCWIA
Ga0318533_1112252223300032059SoilMMSRMMMMMTNERKIWEAALLLVRRHGAAAAEIAQREAQR
Ga0318505_1001067713300032060SoilMMTQTMMTNERKIWEAALLLVRRHGAAAAEVAQREAQRLRSGDDELTCVVWCW
Ga0318504_1009296033300032063SoilMMSRMMMMTNERKIWEAALLLVRRHGAAAAEIAQREAQRLRRSDDELTCVVCCTPTSGEG
Ga0307470_1157783323300032174Hardwood Forest SoilMMMTNERKIWEAALLLVRRHGADAVAIAEREAERLKSGDDELTCVVWCWIAR
Ga0335081_1070201613300032892SoilMMTNERKIWEAAVLLVRRHGAEAAEVAEREAERLRREEDDLTCAVWCWI
Ga0335081_1093441313300032892SoilMMTSGQMTNERKIWEAALLLVRRHGSEALHVAEREAERLRTGDDELSCIVWCWIARS
Ga0335075_1060481813300032896SoilMTNERKIWEAALLLVRRHGSAAVAVAEREAERLKRGDDELTC
Ga0335083_1096041623300032954SoilMMTNERKIWEAALMLVRRHGSEALQVAEREAERLRSGDDELSCIV
Ga0335073_1036732013300033134SoilMMTNERKIWEAALMLVRRHGNDALQVAERVAERLRT
Ga0335073_1213358723300033134SoilMMTNERKIWEAALMLVRRHGGDALQVAEREAERLRS
Ga0310914_10003016163300033289SoilMMSRMMTMTNERKIWEAALLLVRRHGAAAAEIAQREAQRFRRSDDELT
Ga0310914_1058786213300033289SoilMMSRMMMMTNERKIWEAALLLVRRHGAAAAEIAQREAQRLRRSDDELTC
Ga0318519_1044994513300033290SoilMMAPTMMTNERKIWEAALLLVRRHGAAAAEIAQREAQRLRSGDDELTCVVWCWIA


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.