Metagenome / Metatranscriptome Family F041894

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F041894
Family Type	Metagenome / Metatranscriptome
Number of Sequences	159
Average Sequence Length	47 residues
Representative Sequence	LLFFMHLADNRGLKWFVLIFTVAVILGMQYGWTDSFRLTNGVPWAK
Number of Associated Samples	127
Number of Associated Scaffolds	159

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	96.86 %
% of genes from short scaffolds (< 2000 bps)	93.71 %
Associated GOLD sequencing projects	119
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (18.868 % of family members)
Environment Ontology (ENVO)	Unclassified (32.075 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.943 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.35% β-sheet: 0.00% Coil/Unstructured: 48.65%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 159 Family Scaffolds
PF01040	UbiA	23.90
PF01979	Amidohydro_1	15.09
PF03583	LIP	1.89
PF01165	Ribosomal_S21	0.63
PF13231	PMT_2	0.63
PF02566	OsmC	0.63
PF00753	Lactamase_B	0.63
PF13189	Cytidylate_kin2	0.63
PF06764	DUF1223	0.63
PF07040	DUF1326	0.63
PF01547	SBP_bac_1	0.63
PF01148	CTP_transf_1	0.63
PF00069	Pkinase	0.63
PF13147	Obsolete Pfam Family	0.63

COG ID	Name	Functional Category	% Frequency in 159 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	2.52
COG0828	Ribosomal protein S21	Translation, ribosomal structure and biogenesis [J]	0.63
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	0.63
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	0.63
COG5429	Uncharacterized conserved protein, DUF1223 domain	Function unknown [S]	0.63
COG5588	Uncharacterized conserved protein, DUF1326 domain	Function unknown [S]	0.63

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	94.97 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.26 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	42.14 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	38.36 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.63 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.63 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	42.14 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	37.74 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.63 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.63 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	42.14 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	37.74 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.63 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.63 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	42.14 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	9.43 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	0.63 %
Acidicapsa	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa	0.63 %
unclassified Phyllobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → unclassified Phyllobacteriaceae	0.63 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	42.14 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	8.18 %
Phyllobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → unclassified Phyllobacteriaceae → Phyllobacteriaceae bacterium	0.63 %
Acidicapsa acidisoli	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	0.63 %
Paraburkholderia rhynchosiae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia rhynchosiae	0.63 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001180\|JGI12695J13573_1000248	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	6795	Open in IMG/M
3300001356\|JGI12269J14319_10142727	All Organisms → cellular organisms → Bacteria → Acidobacteria	1045	Open in IMG/M
3300003367\|JGI26338J50219_1020528	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	578	Open in IMG/M
3300004091\|Ga0062387_100484320	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	859	Open in IMG/M
3300004472\|Ga0068974_1084314	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300005538\|Ga0070731_10710265	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300005542\|Ga0070732_10179821	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1262	Open in IMG/M
3300005575\|Ga0066702_10726596	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300005602\|Ga0070762_10203836	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1211	Open in IMG/M
3300005602\|Ga0070762_10378128	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	908	Open in IMG/M
3300005712\|Ga0070764_10321199	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	898	Open in IMG/M
3300005712\|Ga0070764_10543119	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300005921\|Ga0070766_10072355	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1988	Open in IMG/M
3300006052\|Ga0075029_100244309	All Organisms → cellular organisms → Bacteria → Acidobacteria	1132	Open in IMG/M
3300006176\|Ga0070765_100322154	All Organisms → cellular organisms → Bacteria → Acidobacteria	1432	Open in IMG/M
3300006806\|Ga0079220_11516678	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	576	Open in IMG/M
3300007982\|Ga0102924_1145697	All Organisms → cellular organisms → Bacteria → Acidobacteria	1102	Open in IMG/M
3300007982\|Ga0102924_1180527	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	937	Open in IMG/M
3300009090\|Ga0099827_10919012	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	758	Open in IMG/M
3300009137\|Ga0066709_102907239	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	632	Open in IMG/M
3300009519\|Ga0116108_1231262	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300009522\|Ga0116218_1005305	All Organisms → cellular organisms → Bacteria	6079	Open in IMG/M
3300009617\|Ga0116123_1129095	All Organisms → cellular organisms → Bacteria → Acidobacteria	660	Open in IMG/M
3300009621\|Ga0116116_1076702	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	947	Open in IMG/M
3300009641\|Ga0116120_1081975	All Organisms → cellular organisms → Bacteria → Acidobacteria	1077	Open in IMG/M
3300009672\|Ga0116215_1015265	All Organisms → cellular organisms → Bacteria → Acidobacteria	3655	Open in IMG/M
3300009759\|Ga0116101_1138896	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	589	Open in IMG/M
3300009764\|Ga0116134_1223239	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	653	Open in IMG/M
3300010159\|Ga0099796_10561869	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300010343\|Ga0074044_10557427	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	748	Open in IMG/M
3300010343\|Ga0074044_11066399	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300010361\|Ga0126378_12409860	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300011120\|Ga0150983_16715586	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	729	Open in IMG/M
3300011271\|Ga0137393_11356966	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300012988\|Ga0164306_11053817	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	673	Open in IMG/M
3300014161\|Ga0181529_10655703	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300014162\|Ga0181538_10359209	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	782	Open in IMG/M
3300014200\|Ga0181526_10500165	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	770	Open in IMG/M
3300014201\|Ga0181537_11028640	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300017822\|Ga0187802_10291953	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300017823\|Ga0187818_10130096	All Organisms → cellular organisms → Bacteria → Acidobacteria	1093	Open in IMG/M
3300017930\|Ga0187825_10337279	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300017932\|Ga0187814_10288446	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	626	Open in IMG/M
3300017933\|Ga0187801_10145609	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	920	Open in IMG/M
3300017935\|Ga0187848_10099805	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	1323	Open in IMG/M
3300017943\|Ga0187819_10284436	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	963	Open in IMG/M
3300017943\|Ga0187819_10292956	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	947	Open in IMG/M
3300017946\|Ga0187879_10441162	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	721	Open in IMG/M
3300017946\|Ga0187879_10869737	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300017948\|Ga0187847_10877265	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300017974\|Ga0187777_10314643	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1072	Open in IMG/M
3300018005\|Ga0187878_1371454	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300018006\|Ga0187804_10199135	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	855	Open in IMG/M
3300018006\|Ga0187804_10217189	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	819	Open in IMG/M
3300018007\|Ga0187805_10371795	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	662	Open in IMG/M
3300018034\|Ga0187863_10338385	All Organisms → cellular organisms → Bacteria → Acidobacteria	837	Open in IMG/M
3300018038\|Ga0187855_10017574	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4709	Open in IMG/M
3300018038\|Ga0187855_10187488	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1224	Open in IMG/M
3300018038\|Ga0187855_10466942	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	735	Open in IMG/M
3300018038\|Ga0187855_10939307	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300018062\|Ga0187784_11555492	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300018086\|Ga0187769_10652528	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	795	Open in IMG/M
3300018086\|Ga0187769_10776713	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	724	Open in IMG/M
3300019268\|Ga0181514_1231535	All Organisms → cellular organisms → Bacteria → Acidobacteria	1594	Open in IMG/M
3300019786\|Ga0182025_1021434	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1412	Open in IMG/M
3300020579\|Ga0210407_10635601	All Organisms → cellular organisms → Bacteria → Acidobacteria	830	Open in IMG/M
3300020579\|Ga0210407_10670032	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	806	Open in IMG/M
3300020579\|Ga0210407_10892490	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	682	Open in IMG/M
3300020581\|Ga0210399_10603620	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	908	Open in IMG/M
3300020583\|Ga0210401_10910497	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	738	Open in IMG/M
3300021088\|Ga0210404_10582684	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	635	Open in IMG/M
3300021170\|Ga0210400_10900227	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	722	Open in IMG/M
3300021180\|Ga0210396_10617584	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	942	Open in IMG/M
3300021180\|Ga0210396_10619125	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	940	Open in IMG/M
3300021401\|Ga0210393_11527070	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300021404\|Ga0210389_10577033	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	884	Open in IMG/M
3300021475\|Ga0210392_11454514	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300021477\|Ga0210398_10008268	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9388	Open in IMG/M
3300021479\|Ga0210410_10165044	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1977	Open in IMG/M
3300021559\|Ga0210409_11152755	All Organisms → cellular organisms → Bacteria → Acidobacteria	650	Open in IMG/M
3300022504\|Ga0242642_1100188	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300022532\|Ga0242655_10218919	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300022533\|Ga0242662_10300611	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300022714\|Ga0242671_1037630	All Organisms → cellular organisms → Bacteria → Acidobacteria	759	Open in IMG/M
3300022714\|Ga0242671_1123368	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300022721\|Ga0242666_1210171	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300023090\|Ga0224558_1250642	All Organisms → cellular organisms → Bacteria → Acidobacteria	508	Open in IMG/M
3300024225\|Ga0224572_1012151	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1633	Open in IMG/M
3300024271\|Ga0224564_1025727	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1087	Open in IMG/M
3300025473\|Ga0208190_1000483	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	16523	Open in IMG/M
3300025500\|Ga0208686_1086869	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	678	Open in IMG/M
3300025509\|Ga0208848_1009015	All Organisms → cellular organisms → Bacteria → Acidobacteria	2067	Open in IMG/M
3300025898\|Ga0207692_10616916	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300026318\|Ga0209471_1135010	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1036	Open in IMG/M
3300027071\|Ga0209214_1012266	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1046	Open in IMG/M
3300027590\|Ga0209116_1151449	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300027767\|Ga0209655_10275866	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300027812\|Ga0209656_10091997	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1608	Open in IMG/M
3300027842\|Ga0209580_10370682	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	713	Open in IMG/M
3300027842\|Ga0209580_10565836	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	564	Open in IMG/M
3300027854\|Ga0209517_10460015	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	701	Open in IMG/M
3300027855\|Ga0209693_10114203	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1337	Open in IMG/M
3300027879\|Ga0209169_10413911	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	709	Open in IMG/M
3300027879\|Ga0209169_10757789	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300027884\|Ga0209275_10243851	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	984	Open in IMG/M
3300027884\|Ga0209275_10335730	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	845	Open in IMG/M
3300027884\|Ga0209275_10362770	All Organisms → cellular organisms → Bacteria → Acidobacteria	813	Open in IMG/M
3300027895\|Ga0209624_10763949	All Organisms → cellular organisms → Bacteria → Acidobacteria	636	Open in IMG/M
3300027905\|Ga0209415_10121919	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2748	Open in IMG/M
3300027910\|Ga0209583_10559897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → unclassified Phyllobacteriaceae → Phyllobacteriaceae bacterium	575	Open in IMG/M
3300028798\|Ga0302222_10114518	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1070	Open in IMG/M
3300028877\|Ga0302235_10481749	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300028906\|Ga0308309_10160641	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1817	Open in IMG/M
3300028906\|Ga0308309_10303127	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1351	Open in IMG/M
3300028906\|Ga0308309_10649627	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	916	Open in IMG/M
3300029944\|Ga0311352_10644615	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	842	Open in IMG/M
3300030007\|Ga0311338_10255174	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1968	Open in IMG/M
3300030054\|Ga0302182_10153606	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	995	Open in IMG/M
3300030509\|Ga0302183_10186092	All Organisms → cellular organisms → Bacteria → Acidobacteria	812	Open in IMG/M
3300030529\|Ga0210284_1268670	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	634	Open in IMG/M
3300030582\|Ga0210261_1016579	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1035	Open in IMG/M
3300030740\|Ga0265460_12830188	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300030740\|Ga0265460_13085829	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300030743\|Ga0265461_10954817	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	838	Open in IMG/M
3300030743\|Ga0265461_11066273	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	811	Open in IMG/M
3300030743\|Ga0265461_12598970	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	599	Open in IMG/M
3300030746\|Ga0302312_10082851	All Organisms → cellular organisms → Bacteria → Acidobacteria	1343	Open in IMG/M
3300030836\|Ga0265767_105925	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	751	Open in IMG/M
3300030847\|Ga0075405_10169913	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300031022\|Ga0138301_1587621	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	598	Open in IMG/M
3300031027\|Ga0302308_10716434	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300031057\|Ga0170834_104921115	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	564	Open in IMG/M
3300031057\|Ga0170834_110545656	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3108	Open in IMG/M
3300031128\|Ga0170823_16052564	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300031231\|Ga0170824_106456088	All Organisms → cellular organisms → Bacteria → Acidobacteria	862	Open in IMG/M
3300031231\|Ga0170824_125412179	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	906	Open in IMG/M
3300031236\|Ga0302324_102947308	All Organisms → cellular organisms → Bacteria → Acidobacteria	568	Open in IMG/M
3300031446\|Ga0170820_15306853	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	852	Open in IMG/M
3300031474\|Ga0170818_105527902	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300031708\|Ga0310686_103073776	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300031708\|Ga0310686_105383020	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1244	Open in IMG/M
3300031715\|Ga0307476_10088945	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2165	Open in IMG/M
3300031715\|Ga0307476_10135332	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1762	Open in IMG/M
3300031718\|Ga0307474_10365413	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1119	Open in IMG/M
3300031718\|Ga0307474_10490343	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	963	Open in IMG/M
3300031754\|Ga0307475_10931441	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	685	Open in IMG/M
3300031754\|Ga0307475_11314555	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300031820\|Ga0307473_11282744	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300031823\|Ga0307478_10703678	All Organisms → cellular organisms → Bacteria → Acidobacteria	846	Open in IMG/M
3300031962\|Ga0307479_10881552	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	868	Open in IMG/M
3300032028\|Ga0316052_102058	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1010	Open in IMG/M
3300032515\|Ga0348332_10635155	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300032515\|Ga0348332_11936428	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	593	Open in IMG/M
3300032515\|Ga0348332_12017145	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	869	Open in IMG/M
3300032783\|Ga0335079_10394968	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1492	Open in IMG/M
3300032954\|Ga0335083_10770547	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	774	Open in IMG/M
3300032955\|Ga0335076_10902973	All Organisms → cellular organisms → Bacteria → Acidobacteria	765	Open in IMG/M
3300034124\|Ga0370483_0057758	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1233	Open in IMG/M
3300034282\|Ga0370492_0195103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia rhynchosiae	826	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.37%
Host-Associated	Host-Associated	0.63%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.58%
Aquatic	Environmental → Aquatic	25.79%
Plants	Host-Associated → Plants	0.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.41%
Freshwater	Environmental → Aquatic → Freshwater	23.27%
Peat	Environmental → Terrestrial → Peat	6.29%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.89%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.26%
Sediment	Environmental → Aquatic → Sediment	1.26%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.65%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	23.27%
Loam	Environmental → Terrestrial → Soil → Loam	13.21%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.55%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	6.29%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.89%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	28.93%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.58%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.58%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	11.95%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.92%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	6.29%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	6.29%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	5.03%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.89%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.89%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.26%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.63%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.63%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.87%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	9.43%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	6.92%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	6.29%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.66%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.66%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	5.03%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.77%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.14%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.52%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.52%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.52%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.52%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.89%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.89%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	1.89%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.26%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.26%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.26%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.26%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.63%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.63%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.63%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.63%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.63%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.63%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.63%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001180	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300003367	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004472	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 71 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009617	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_100	Environmental	Open in IMG/M
3300009621	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_150	Environmental	Open in IMG/M
3300009641	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300014161	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018005	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300019268	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022504	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022714	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022721	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023090	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 20-24	Environmental	Open in IMG/M
3300024225	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5	Host-Associated	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300025473	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10 (SPAdes)	Environmental	Open in IMG/M
3300025500	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40 (SPAdes)	Environmental	Open in IMG/M
3300025509	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300027071	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027590	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O1 (SPAdes)	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300028798	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2	Environmental	Open in IMG/M
3300028877	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030054	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_1	Environmental	Open in IMG/M
3300030509	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_2	Environmental	Open in IMG/M
3300030529	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO740-VDE013SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030582	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO145-ARE022SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300030746	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_1	Environmental	Open in IMG/M
3300030836	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030847	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031022	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031027	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_3	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032028	Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSA5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M
3300034282	Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12695J13573_10002481	3300001180	Forest Soil	GLALLFFMHLADNRGLRWFVIIFTVAVLFGLQYGWTDSYRLTNGVPWAQ*
JGI12269J14319_101427271	3300001356	Peatlands Soil	GLALLFFMHLSENRGLLWFVVIFTGFVLLAMQYGWTDSFRMSGGVPWAK*
JGI26338J50219_10205281	3300003367	Bog Forest Soil	AVEAALALLFFMHLSENHGLLGFVLILTVFVLLAMQYGWTDSFRELLGAPWSSYSKY*
Ga0062387_1004843201	3300004091	Bog Forest Soil	AENRGLRWFVLIFMVAVALGLQYGWTDAFRISEGVKWAK*
Ga0068974_10843141	3300004472	Peatlands Soil	FFMHLWMENRGLLWFVVISTVFVLLAMQYGWTDSFRLSGGVPWAS*
Ga0070731_107102652	3300005538	Surface Soil	LFFMHLTDNRGLMWFVVIFIVAVLLGMQYGWTDSFRLINGAPWAK*
Ga0070732_101798213	3300005542	Surface Soil	ESRGLLWFVAIFTVFVLLAMQYGWTDSFRLSAGAPWSK*
Ga0066702_107265963	3300005575	Soil	LADNRGLLWFVVIFNVFVLLGMQFGWTDSFRLSGGVPWAK*
Ga0070762_102038363	3300005602	Soil	ALLFFMHLWENRGLKWFVLIFTVAVILGMQYGWTDSYRILDGVPWAK*
Ga0070762_103781283	3300005602	Soil	LLFFMHLSENRGLMWFVVIFTVAVILGMQYGWTDSYRLLDGVRWAQ*
Ga0070764_103211991	3300005712	Soil	MHLADNSGLKWFVVIFTVAVILGMQYGWTDSFRLIDGAPWAK*
Ga0070764_105431193	3300005712	Soil	LRENRGLRWFVLIFAIGVLLGLQYGWTDSFRLLDGVRWAQ*
Ga0070766_100723553	3300005921	Soil	HLSDNRGLRWFVLIFTVAVIFGMQYGWPDSSRLINGVPWAR*
Ga0075029_1002443091	3300006052	Watersheds	LFFMHLSENRGLKWFVLIFTIAVILGMQYGWTDSFRLTDGVPWAK*
Ga0070765_1003221543	3300006176	Soil	VEAGLALLFFMHLSENRGLRWFVLIFTVAVILGMQYGWTDSFRLSNGVPWAK*
Ga0079220_115166783	3300006806	Agricultural Soil	LFFMHLWAENRGLLWFVVIFTVFVLLAMQYGWTDSFRLSGGVPWAK*
Ga0102924_11456973	3300007982	Iron-Sulfur Acid Spring	WENRGLKWFVLIFTVAVILGMQYGWTDSFRILDGAPWAK*
Ga0102924_11805271	3300007982	Iron-Sulfur Acid Spring	LLFFMDLSENRGLMWFVLIFIVAVILGMQYGWTDSFRLIDGVPWAK*
Ga0099827_109190123	3300009090	Vadose Zone Soil	FMHLAENRGLLLFVVVFTVSVLLTMQYGWTDAFRLSAGAPWAK*
Ga0066709_1029072393	3300009137	Grasslands Soil	HLWAENRGLLWFVVVFTVFVLLAMQYGWTDSFRLSGGVPWAK*
Ga0116108_12312621	3300009519	Peatland	MLTRMLILACIEGAIALLFFMHLADNKGLRWLVLIFTVAVILGMQYGWTDSNRLANGVQ
Ga0116218_10053058	3300009522	Peatlands Soil	ALALLFFMHLWENRGLKWFVLIFTVAVILGMQYGWTDSFRISEGVQWAK*
Ga0116123_11290953	3300009617	Peatland	LFFMHLSENRGLMWFVVIFTVAVLLGMQYGWTDSYRLIDGVPWSH*
Ga0116116_10767023	3300009621	Peatland	LFFMHLSENRGLMWFVFIFTVAVLLMLQYGWTDSFRLVNGVPWAK*
Ga0116120_10819751	3300009641	Peatland	MLTRMLILACIEGAIALLFFMHLADNKGLRWLVLIFTVAVILGMQYGWTDSNRLANGVQWSK*
Ga0116215_10152656	3300009672	Peatlands Soil	LWMENRGLLWFVVISTVFVLLAMQYGWTDSFRLSGGVPWAS*
Ga0116101_11388961	3300009759	Peatland	LFFMHLWENRGLKWFVLIFTVAVILGMQYGWTDSYRLLDGVPWAK*
Ga0116134_12232393	3300009764	Peatland	MHLWENRGLKWFVLIFTVVVILVIKNGWTDSYRLIDGVPWAK*
Ga0099796_105618691	3300010159	Vadose Zone Soil	MHLADNRGLRWFVIIFSVAIILGMQDGWTDSFRLTNGVPWAR*
Ga0074044_105574271	3300010343	Bog Forest Soil	LLFFMHLSENRGLLWFVVIFAVFALLAMQYGWTDSFRIANGAPWTK*
Ga0074044_110663992	3300010343	Bog Forest Soil	EAGLALLFFMHLSENRGLTWFVIIFTVAVILGMQYGWTDSFRIVDGVKWAK*
Ga0126378_124098602	3300010361	Tropical Forest Soil	FMHLWMENRGLQWFVGVITIFVLLAMQYGWTDSFRLMNGVPWAK*
Ga0150983_167155862	3300011120	Forest Soil	ALLFFMHLSENRGLRWFVLIFTVAVILGMQYGWSDSSRLLNGVQWAR*
Ga0137393_113569661	3300011271	Vadose Zone Soil	MHLADNRGLRWFVIIFTVAVILGMQYGWTDSFRLTNGVPWAK*
Ga0164306_110538171	3300012988	Soil	IEASLALLFFMHLADNRGLLWFVVIFNGFVLFAMQYSWTDSFRISNGVPWAK*
Ga0181529_106557032	3300014161	Bog	GLALLFFMHLSKNRGLMWFVVIFTVAVLLGMQYGWTDSFRLLDGVRWSH*
Ga0181538_103592092	3300014162	Bog	MLTRMLILACIEGAIALLFFMHLADNKGLRWFVLIFTVAVILGMQYGWTDSNRLANGVQWSK*
Ga0181526_105001652	3300014200	Bog	NKGLRWFVLIFTVAVILGMQYGWTDSNRLANGVQWSK*
Ga0181537_110286402	3300014201	Bog	LLFFMHLSENRGLKWFVLIFTVAVVIGMQYGWTDSFRLLDGVPWAH*
Ga0187802_102919531	3300017822	Freshwater Sediment	MHLLENRGLLWFVAIFTVFVLLAMQYGWTDSFRLVDGAPWAK
Ga0187818_101300961	3300017823	Freshwater Sediment	FALLFFMHLADNRGLRWFVVIFTVAVILGMQYGWTDSYRLLDGVQWAK
Ga0187825_103372791	3300017930	Freshwater Sediment	LKDSRGLLWFFLIFAGFVLLAMQYGWTDSFRLVDGVPWAK
Ga0187814_102884461	3300017932	Freshwater Sediment	VAVVEAALALLFFMHLADNRGLLWFVVIFTVFVLLALQYGWTDSFRITSGVPWSKIG
Ga0187801_101456093	3300017933	Freshwater Sediment	FFMHLSENRGLLWFVVIFTGFVLLAMQYGWTDSFRMSGGVPWAK
Ga0187848_100998053	3300017935	Peatland	SQMLTRMLILACIEGAIALLFFMHLADNKGLRWFVLIFTVAVILGMQYGWTDSNRLANGVQWSK
Ga0187819_102844363	3300017943	Freshwater Sediment	GLLWFVVIFTVFVLLTLQYGWTDSFRLSGGVPWAK
Ga0187819_102929561	3300017943	Freshwater Sediment	VEGGIALLFFMHLADNRGLRWFVVIFTVAVILGMQYGWTDSYRLLDGVRWAK
Ga0187879_104411621	3300017946	Peatland	LALLFFMHLSENHGLLWFVLIFTGFVLLAMQYSWTDSFRELLGAPWSNYTKY
Ga0187879_108697371	3300017946	Peatland	MLTRMLILACIEGAIALLFFMHLADNKGLRWFVLIFTVAVILGMQYGWTDSNRLANGVQWSK
Ga0187847_108772651	3300017948	Peatland	NRGLKWFVIIFTVAVILGMQYGWTDSFRLSNGVPWAK
Ga0187777_103146433	3300017974	Tropical Peatland	EAALALLFFMHLSENRGLMWFVIIFTVSVLLGMQYGWTDSFRLLHGVPWAN
Ga0187878_13714541	3300018005	Peatland	GLMWFVVIFTVAVLLGMQYGWTDSYRLIDGVPWSH
Ga0187804_101991353	3300018006	Freshwater Sediment	EASLALLFFMHLKDNPGLKWFVLIFTVAVILGMQYGWTDSFRLLDGVPWAK
Ga0187804_102171891	3300018006	Freshwater Sediment	AIVEAGIALLFFMDLSENRGLMWFVVIFSVAVLLGMQYGWTDSFRLAEGVRWAK
Ga0187805_103717953	3300018007	Freshwater Sediment	LAMLFFMHLSDNRGLMWFVVIFTVAVILGMQYGWTDSFRLLDGVQWAK
Ga0187863_103383853	3300018034	Peatland	MHLWENRGLKWFVIIFTVAVILGMQYGWTDSFRLSNGVPWAK
Ga0187855_100175746	3300018038	Peatland	GGLALLFFMHLSENRGLLWFVGIFTVAVILGMQYGWTDSYRLIDGVPWAR
Ga0187855_101874883	3300018038	Peatland	NENRGLRWFVVIFTVAVLLFLQYGWSDAHRLANGVPWAK
Ga0187855_104669423	3300018038	Peatland	MHLWENRGLKWFVLIFTVAVILGMQYGWTDSFRLAHGVPWAK
Ga0187855_109393071	3300018038	Peatland	LALLFFMHLAENRGLMWFVVIFAVFVLLAMQYGWTDSFRLTDGVPWAK
Ga0187784_115554921	3300018062	Tropical Peatland	KLLWMLIVAFIEGALALLFFMNLAVNRGLRWFVLIFTIAVILGLQYGWTDSFRELRGVPWSH
Ga0187769_106525283	3300018086	Tropical Peatland	GLRWFVLIFTVAVILMLQYGWTDSFRVTEGVPWAH
Ga0187769_107767133	3300018086	Tropical Peatland	LFFMHLSENRGLLWFVVIFAVFALLAMQYGWTDSFRLANGVPWAK
Ga0181514_12315351	3300019268	Peatland	ENRGLKWFVLIFTVAVIVGLQYGWTDSFRLLDGAPWAK
Ga0182025_10214341	3300019786	Permafrost	RRRACIIEGGLALLFFMHLSENRGLMWFVLIFAVTAILGMQYGWTDSFRLVNGVPWAK
Ga0210407_106356013	3300020579	Soil	VAMVEAGVALLFFMHLWENRGLKWFVIIFTVAVILGMQYGWTDSFRLSNGVPWAK
Ga0210407_106700323	3300020579	Soil	VEAGVALLFFMHLSENRGLRWFVLVFTVAVILGMQYGWSDSSRLLNGVQWAH
Ga0210407_108924903	3300020579	Soil	LFFMHLSDNRGLRWFVVIFTVSVLLGMQYGWTDSFRLLGGAPWAK
Ga0210399_106036203	3300020581	Soil	GLKWFVLIFTVAVILGMQYGWTDSFRILEGAPWAR
Ga0210401_109104972	3300020583	Soil	LFFMHLSENRGLMWFVVIFTVAVILGMQYGWTDSFRLIDGVPWAR
Ga0210404_105826841	3300021088	Soil	VAVIEAALALLFFMHLAQNRGLLWFVGIFTVFVLLAMQYGWTDSFRLTSGVPWAK
Ga0210400_109002271	3300021170	Soil	IVAIIEGGLALLFFMHLADNRGLRWFVIIFTVAVILGMQYGWTDSSRINNGVPWGRVNVSTQ
Ga0210396_106175841	3300021180	Soil	SVAIIEATLALLFFMDLSENRGLKWFFGIFIVFVLLAMQYGWTDSFRLTDGVPWAK
Ga0210396_106191253	3300021180	Soil	ALLFFMHLSQNRGLKWFVLIFTVAVILGMQYGWTDSFRLTNGVPWAK
Ga0210393_115270702	3300021401	Soil	EGGIALLFFMHLSENKGLRWFVLIFTVAVILGLQYGWPDAFRIHNGAPWSSLRP
Ga0210389_105770331	3300021404	Soil	SVAVIEAALALLFFMHLSENRGLKWFFIIFTVFVLLAMQYGWTDSFRLTDGVPWAK
Ga0210392_114545141	3300021475	Soil	SENRGLMWFVLIFTVAVILGMQYGWTDSFRLIDGVQWAK
Ga0210398_100082681	3300021477	Soil	RGLKWFVLVFTVAVILGMQYGWTDSFRILDGAPWAK
Ga0210410_101650441	3300021479	Soil	VAIVEGGLALLFFMHLSDNRGLRWFVLIFTVAVIFGMQYGWPDSSRLINGVPWAR
Ga0210409_111527551	3300021559	Soil	ALLFFMHLSDNHGLLWFVVVFTVFVLLAMQYGWTDSFRELLGAPWSSYSTS
Ga0242642_11001882	3300022504	Soil	FFMHLSQNRGLKWFVLIFTVAVILGMQYGWTDSFRLTNGVPWAK
Ga0242655_102189192	3300022532	Soil	LCVAIIEAGVALLFFMDLSENRGLRWFVIVFIVAVIFGMQYGWSDSTRLLNGVPWSH
Ga0242662_103006111	3300022533	Soil	DSRGLLWFVAVFTIFVLLAMQYGWTDSYRLLNGVPWAK
Ga0242671_10376301	3300022714	Soil	RGLKWFVLIFTVAVILGMQYGWTDSFRLTNGVPWAK
Ga0242671_11233681	3300022714	Soil	AVIEAALALLFFMHLAQNRGLLWFVGIFTVFVLLAMQYGWTDSFRLTSGVPWAK
Ga0242666_12101711	3300022721	Soil	VEAGLALLFSMHLADNRGLKWFVLIFTVAVILGMQYGWTDSFRLTNGVPWAK
Ga0224558_12506422	3300023090	Soil	ITASQMIERMLIVACVEGGMALLFFMHLADNRGLRWFVLVFTVAVILGLQYSWSDAFRLTSGVPWAR
Ga0224572_10121511	3300024225	Rhizosphere	EAALALLFFMHLSENHGLLWFVLIFTVFVLLAMQYSWTDSFRVLLGAPWSNYTKY
Ga0224564_10257271	3300024271	Soil	SVAIIEGGLALLFFMHLSENRGLMWFVLIFTVAVLLGMQYGWTDSYRLLDGVRWAR
Ga0208190_10004837	3300025473	Peatland	MLTRMLILACIEGAIALLFFMHLADNKGLRWLVLIFTVAVILGMQYGWTDSNRLANGVQWSK
Ga0208686_10868693	3300025500	Peatland	SENRGLMWFVVIFTVAVLLGMQYGWTDSYRLIDGVPWSH
Ga0208848_10090151	3300025509	Arctic Peat Soil	NRGLKWFVVIFTVAVILGMQYGWTDSFRLIDGAPWAK
Ga0207692_106169161	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	HLWEEKRGLLWFVVIFTLSVLAGMQYSWSDSFRLERGVPYANFGK
Ga0209471_11350103	3300026318	Soil	IVESGLALLFFMHLADNRGLRWFVIIFTVAVILGMQYGWTDSFRLTNGVPWAK
Ga0209214_10122663	3300027071	Forest Soil	RGLLWFVAIFTVFVLLAMQYGWTDSFRLSAGAPWSK
Ga0209116_11514491	3300027590	Forest Soil	LFFMHLWENRGLKWFVLIFTVSVILGMQYGWTDSYRILDGVPWAK
Ga0209655_102758662	3300027767	Bog Forest Soil	ENRGLKWFVLIFTVAVILGMQYGWTDSFRLADGVKWAH
Ga0209656_100919971	3300027812	Bog Forest Soil	ALLFFMHLAENRGLLWFVVIFTVFVLLAMQYGWTDSFRLTDGVPWAK
Ga0209580_103706821	3300027842	Surface Soil	LALLFFMHLLESRGLLWFVAIFTVFVLLAMQYGWTDSFRLSAGAPWSK
Ga0209580_105658361	3300027842	Surface Soil	SRGLLWFVAVFTIFVLLAMQYGWTDSYRLLDGVPWAK
Ga0209517_104600153	3300027854	Peatlands Soil	NRGLKWFVLIFTVAVILGMQYGWTDSFRISEGVQWAK
Ga0209693_101142031	3300027855	Soil	NRGLMWFVLIFTVAVILGMQYGWTDSFRLIDGVPWAK
Ga0209169_104139111	3300027879	Soil	VIEGGLALLFFMHLSENRGLMWFVVIFTVAVILGMQYGWTDSYRLINGVPWSK
Ga0209169_107577892	3300027879	Soil	NRGLRWFVLIFAVAAILGMQYGWTDSFRLLDGVRWAK
Ga0209275_102438511	3300027884	Soil	AILEGGLALLFFMHLSENRGLMWFVVIFTVAVILGMQYGWTDSYRLLDGVRWAQ
Ga0209275_103357303	3300027884	Soil	IEAALALLFFMHLAENRGLLWFVGIFTVFVLLAMQYGWTDSFRIVDGVKWAK
Ga0209275_103627701	3300027884	Soil	IVAMVEAGVALLFFMHLWENRGLKWFVIIFTVAVILGMQYGWTDSFRLSNGVPWAK
Ga0209624_107639491	3300027895	Forest Soil	ENRGLKWFVLIFTVAVVLGLQYGWTDSFRLADGVPWAK
Ga0209415_101219191	3300027905	Peatlands Soil	EAALALLFFMHLSENRGLKWFVVIFTVAVVLGMQYGWTDSFRLLDGAPWAK
Ga0209583_105598972	3300027910	Watersheds	LLFFMHLSDNHQLLWFVVIFTVFVLLAMQYGWTDSFRELLGAPWSSYSK
Ga0302222_101145183	3300028798	Palsa	MHLWMENRGLLWFVVILTGFVIFAMQYSWTDSFRLLNGVPWAK
Ga0302235_104817492	3300028877	Palsa	FMHLNENRGLRWFVLIFTVAVILGMQYGWTDSFRLVTGAPWAK
Ga0308309_101606411	3300028906	Soil	IEGGLALLFFMHLSENRGLMWFVVIFTVAVILGMQYGWTDSFRLIDGVPWAR
Ga0308309_103031273	3300028906	Soil	DLSENRGLKWFFGIFIVFVLLAMQYGWTDSFRLTDGVPWAK
Ga0308309_106496271	3300028906	Soil	MMSVAIIEAALALLFFMDLSENRGLKWFFGIFIVFVLLAMQYGWTDSFRLTDGVPWAK
Ga0311352_106446151	3300029944	Palsa	IVAIVEAALALLFLMHLSENRGLRWFVLIFTVAVILGMQYGWTDSFRVSNGVPWAH
Ga0311338_102551741	3300030007	Palsa	IVAIVEAALALLFFMHLWDNRGLKWFVLIFTVAVILGMQYGWTDSFRQVNGVPWAK
Ga0302182_101536061	3300030054	Palsa	WENRGLKWFVLVFTVSVILGMQYGWTDSFRILDGAPWAK
Ga0302183_101860921	3300030509	Palsa	ENRGLKWFVMIFTVAVILGMQYGWTDSFRLSNGVPWAK
Ga0210284_12686701	3300030529	Soil	ENRGLKWFVLIFTVAVILGMQYGWTDSFRLSDGVRWAK
Ga0210261_10165793	3300030582	Soil	AMVEAALALLFFMHLWDNRGLKWFVLIFTVAVILGMQYGWTDSFRLSNGVPWAK
Ga0265460_128301881	3300030740	Soil	ENRGLKWFVLIFTIAVILGMQYGWTDSFRLIDGVQWAK
Ga0265460_130858291	3300030740	Soil	MHLSENRGLKWFVLIFTVVVILGMQYGWTDSFRLSDGVRWAK
Ga0265461_109548173	3300030743	Soil	LFFMHLWENRGLKWFVIIFTVAVILGLQYGWSDSFRLSNGVPWAK
Ga0265461_110662731	3300030743	Soil	ENRGLKWFVLIFTVAVILGMQYGWTDSYRILEGAPWAK
Ga0265461_125989701	3300030743	Soil	RMMIVACIEAGVALLFFMHLSENRGLRWFVLIFTVAVIMGLQYGWTDAFRVSNGVPWAR
Ga0302312_100828513	3300030746	Palsa	ALLFFMHLSENRGLKWFVLIFTVAVVFGMQYGWSDSFRLLDGVPWAH
Ga0265767_1059253	3300030836	Soil	ENRGLRWFVLIFTVAVILGLQYGWTDSFRLSNGVPWAK
Ga0075405_101699132	3300030847	Soil	FFMRLADNRGLRWFVIVFTVAVLFGMQYGWTDSFRLTNGVPWAK
Ga0138301_15876212	3300031022	Soil	VIVEAGVALLFFMHLSENRGLRWFVIIFTVAVTLGLQYGWTDSFRLTNGVPWAK
Ga0302308_107164341	3300031027	Palsa	ALLFFMHLNENRGLRWFVLIFTVAVILGMQYGWTDSFRLVTGAPWAK
Ga0170834_1049211151	3300031057	Forest Soil	LLFFMHLSDNHGLLWFVVVFTVFVLLAMQYGWTDSFRELLGAPWSSYSKS
Ga0170834_1105456561	3300031057	Forest Soil	AIVEGGLALLFFMHLWENRGLRWFVIVFTVAVILGMQYGWTDSFRISSGVPWAK
Ga0170823_160525643	3300031128	Forest Soil	LLFFMHLADNRGLKWFVLIFTVAVILGMQYGWTDSFRLTNGVPWAK
Ga0170824_1064560883	3300031231	Forest Soil	LADNRGLKWFVLIFTVAVILGMQYGWTDSFRLTNGVPWAK
Ga0170824_1254121791	3300031231	Forest Soil	VFLFFMRLADNRGLRWFVIVFTVAVLFGMQYGWTDSFRLTNGVPWAK
Ga0302324_1029473081	3300031236	Palsa	EAGLALLFFMHLSENRGLRWFVLIFTVAVLLGMQYGWTDSFRLIDGVPWAK
Ga0170820_153068531	3300031446	Forest Soil	ENRGLLWFFVVGTVFVLLAMQYGWTDSFRILGGAPWSKIG
Ga0170818_1055279022	3300031474	Forest Soil	VFLFFMRLADNRGLRWFVIVFTVAVLFGMQYGWTDSFRLTNGVPWEK
Ga0310686_1030737762	3300031708	Soil	LLFFMHLSDNRGLRWFVLIFTIAVLLGMQYGWTDSFRLVDGVRWAR
Ga0310686_1053830203	3300031708	Soil	GLKWFVLIFTVAVILGMQYGWTDSYRILEGAPWAK
Ga0307476_100889451	3300031715	Hardwood Forest Soil	FFMHLSENRGLRWFVLIFTVSVLLGMQYGWTDSFRLMNGVPWAH
Ga0307476_101353321	3300031715	Hardwood Forest Soil	AGLALLFFMHLSENRGLRWFVLIFTVAVILGMQYGWSDSYRLTNGVPWAH
Ga0307474_103654133	3300031718	Hardwood Forest Soil	IEAGLALLFFMDLSDNRGLKWFFIIFIVFVLLAMQYGWTDSFRLTDGVPWAK
Ga0307474_104903433	3300031718	Hardwood Forest Soil	VAIIEAGLALLFFMDLSENRGLKWFFIIFIVFVLLAMQYGWTDSFRLTDGVPWAK
Ga0307475_109314413	3300031754	Hardwood Forest Soil	FFMDLSENRGLKWFFIIFTVFVLLAMQYGWTDSFRLTDGVPWAK
Ga0307475_113145552	3300031754	Hardwood Forest Soil	GLALLFFMHLSENRGLMWFVVIFTVAVILGMQYGWTDSFRLIDGVPWAR
Ga0307473_112827443	3300031820	Hardwood Forest Soil	MHLTDNHGLLWFVVIFTVFVLLAMQYGWTDSFRLSDGVQWAT
Ga0307478_107036783	3300031823	Hardwood Forest Soil	VEAALALLFFMHLSDNHGLLWFVVVFTVFVLLAMQYGWTDSFRELLGAPWAKVGS
Ga0307479_108815521	3300031962	Hardwood Forest Soil	ALALLFFMHLSENRGLLWFFAIFTVFVLLALQYGWTDSFRLTDGVPWAK
Ga0316052_1020583	3300032028	Soil	GLKWFVIIFTVAVILGMQYGWTDSFRLSNGVPWAK
Ga0348332_106351551	3300032515	Plant Litter	IEAALALLFFMHLADNRGLRWFVVVFTVAVILGMQYGWTDSFRMLVGYAPFSK
Ga0348332_119364281	3300032515	Plant Litter	VAMVEAGLALLFFMHLAENRGLKWFVLIFTIAVILGMQYGWTDSFRLIDGVQWAR
Ga0348332_120171453	3300032515	Plant Litter	SVAVIEAALALLFFMDLAENRGLLWFFVIFIVFVLLAMQYGWTDSFRMLVGAAPYSR
Ga0335079_103949681	3300032783	Soil	LLVAVVEAALALLFFMHLSDNHGLLSFVAIFTVFVLLAMQYGWTDSFRELLGVPWAK
Ga0335083_107705471	3300032954	Soil	DNRGLLWFVVIFNVFVLLALQYGWTDSFRMLGGVQWAK
Ga0335076_109029732	3300032955	Soil	HLWDNRGLRWFVLIFTVAVTLGLQYGWADSYRLINGVPWAK
Ga0370483_0057758_2_169	3300034124	Untreated Peat Soil	VAIIEGGIALLFFMHLSENRGLMWFVLIFTVAVILGMQYGWTDSFRILDGVRWAK
Ga0370492_0195103_54_176	3300034282	Untreated Peat Soil	MNENRGLRWFVVISIVAVLLFMQYGWTDAHRLANGVPWAK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F041894

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences