Metagenome Family F041858

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F041858
Family Type	Metagenome
Number of Sequences	159
Average Sequence Length	59 residues
Representative Sequence	MAETFKCPHCGAVYEIRYDKAVSEDNRLAHCEVCGKQMDARNGSDIRHYELVKMPDGTNV
Number of Associated Samples	104
Number of Associated Scaffolds	159

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	67.92 %
% of genes near scaffold ends (potentially truncated)	40.88 %
% of genes from short scaffolds (< 2000 bps)	89.94 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (66.038 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (15.094 % of family members)
Environment Ontology (ENVO)	Unclassified (30.189 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.491 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 25.00% Coil/Unstructured: 75.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 159 Family Scaffolds
PF03401	TctC	5.03
PF13719	zinc_ribbon_5	1.89
PF08530	PepX_C	1.89
PF13365	Trypsin_2	1.26
PF08352	oligo_HPY	1.26
PF12681	Glyoxalase_2	1.26
PF08857	ParBc_2	1.26
PF14255	Cys_rich_CPXG	1.26
PF04392	ABC_sub_bind	1.26
PF13458	Peripla_BP_6	1.26
PF00216	Bac_DNA_binding	0.63
PF00857	Isochorismatase	0.63
PF07883	Cupin_2	0.63
PF13751	DDE_Tnp_1_6	0.63
PF05129	Elf1	0.63
PF00239	Resolvase	0.63
PF01936	NYN	0.63
PF11319	VasI	0.63
PF02615	Ldh_2	0.63
PF02922	CBM_48	0.63
PF00903	Glyoxalase	0.63
PF00534	Glycos_transf_1	0.63
PF06055	ExoD	0.63
PF13717	zinc_ribbon_4	0.63
PF00891	Methyltransf_2	0.63
PF08238	Sel1	0.63

COG ID	Name	Functional Category	% Frequency in 159 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	5.03
COG2936	Predicted acyl esterase	General function prediction only [R]	1.89
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.26
COG4318	Uncharacterized conserved protein	Function unknown [S]	1.26
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	0.63
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.63
COG1432	NYN domain, predicted PIN-related RNAse, tRNA/rRNA maturation	General function prediction only [R]	0.63
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.63
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.63
COG2055	Malate/lactate/ureidoglycolate dehydrogenase, LDH2 family	Energy production and conversion [C]	0.63
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.63
COG3932	Exopolysaccharide synthesis protein ExoD	Cell wall/membrane/envelope biogenesis [M]	0.63
COG4888	Transcription elongation factor Elf1, contains Zn-ribbon domain	Transcription [K]	0.63

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.04 %
Unclassified	root	N/A	33.96 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.04 %
Unclassified	root	N/A	33.96 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.04 %
Unclassified	root	N/A	33.96 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	55.35 %
Unclassified	root	N/A	33.96 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.89 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	46.54 %
Unclassified	root	N/A	33.96 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.89 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.96 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	20.13 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	13.84 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.89 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.63 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.96 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	13.21 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.89 %
Yersiniaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Yersiniaceae	0.63 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.63 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.63 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.96 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	13.21 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.52 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.89 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.63 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.63 %
Serratia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Yersiniaceae → Serratia	0.63 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.63 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.96 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	13.21 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.89 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.63 %
unclassified Microvirga	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → unclassified Microvirga	0.63 %
Serratia nematodiphila	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Yersiniaceae → Serratia → Serratia nematodiphila	0.63 %
Afipia carboxidovorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia carboxidovorans	0.63 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.63 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.96 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	13.21 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.89 %
Microvirga sp. VF16	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → unclassified Microvirga → Microvirga sp. VF16	0.63 %
Serratia nematodiphila DZ0503SBS1	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Yersiniaceae → Serratia → Serratia nematodiphila → Serratia nematodiphila DZ0503SBS1	0.63 %
Bradyrhizobium sp. th.b2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. th.b2	0.63 %
Afipia carboxidovorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia carboxidovorans	0.63 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.63 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.63 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000156\|NODE_c0363132	Not Available	691	Open in IMG/M
3300000156\|NODE_c0524941	All Organisms → cellular organisms → Bacteria → Proteobacteria	1127	Open in IMG/M
3300000579\|AP72_2010_repI_A01DRAFT_1047130	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	626	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10045842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1146	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10089148	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	767	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10106362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	689	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10110342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	675	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1022119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1194	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1029690	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1011	Open in IMG/M
3300000787\|JGI11643J11755_11791005	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10091540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	644	Open in IMG/M
3300000956\|JGI10216J12902_100873672	All Organisms → cellular organisms → Bacteria	1124	Open in IMG/M
3300000956\|JGI10216J12902_103318567	Not Available	1842	Open in IMG/M
3300000956\|JGI10216J12902_105342358	All Organisms → cellular organisms → Bacteria → Proteobacteria	1171	Open in IMG/M
3300001661\|JGI12053J15887_10184170	All Organisms → cellular organisms → Bacteria → Proteobacteria	1073	Open in IMG/M
3300002911\|JGI25390J43892_10161608	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	524	Open in IMG/M
3300004281\|Ga0066397_10138989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	546	Open in IMG/M
3300004479\|Ga0062595_101034433	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300005167\|Ga0066672_10526632	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300005295\|Ga0065707_10273041	Not Available	1066	Open in IMG/M
3300005332\|Ga0066388_100440618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1945	Open in IMG/M
3300005332\|Ga0066388_101632897	All Organisms → cellular organisms → Bacteria → Proteobacteria	1136	Open in IMG/M
3300005332\|Ga0066388_102640344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	915	Open in IMG/M
3300005332\|Ga0066388_106950513	Not Available	569	Open in IMG/M
3300005467\|Ga0070706_101305147	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	665	Open in IMG/M
3300005553\|Ga0066695_10676569	All Organisms → cellular organisms → Bacteria → Proteobacteria	608	Open in IMG/M
3300005560\|Ga0066670_10279578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1014	Open in IMG/M
3300005713\|Ga0066905_100858263	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	791	Open in IMG/M
3300005764\|Ga0066903_100629864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1868	Open in IMG/M
3300005764\|Ga0066903_100829361	All Organisms → cellular organisms → Bacteria	1659	Open in IMG/M
3300005764\|Ga0066903_101517187	All Organisms → cellular organisms → Bacteria → Proteobacteria	1266	Open in IMG/M
3300005764\|Ga0066903_102593696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	982	Open in IMG/M
3300005764\|Ga0066903_102799195	All Organisms → cellular organisms → Bacteria → Proteobacteria	946	Open in IMG/M
3300005764\|Ga0066903_103179165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	888	Open in IMG/M
3300005764\|Ga0066903_105245590	Not Available	685	Open in IMG/M
3300005764\|Ga0066903_105950681	Not Available	639	Open in IMG/M
3300005764\|Ga0066903_107724057	Not Available	553	Open in IMG/M
3300005937\|Ga0081455_10000151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	83439	Open in IMG/M
3300005937\|Ga0081455_10538887	Not Available	775	Open in IMG/M
3300006049\|Ga0075417_10142833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1110	Open in IMG/M
3300006194\|Ga0075427_10074933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	606	Open in IMG/M
3300006791\|Ga0066653_10090052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1374	Open in IMG/M
3300006804\|Ga0079221_10878756	Not Available	655	Open in IMG/M
3300006844\|Ga0075428_100619796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1155	Open in IMG/M
3300006844\|Ga0075428_101009904	Not Available	880	Open in IMG/M
3300006845\|Ga0075421_102738912	Not Available	509	Open in IMG/M
3300006853\|Ga0075420_100297464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1400	Open in IMG/M
3300006854\|Ga0075425_101524079	Not Available	755	Open in IMG/M
3300006904\|Ga0075424_100134460	All Organisms → cellular organisms → Bacteria → Proteobacteria	2616	Open in IMG/M
3300007076\|Ga0075435_100150930	All Organisms → cellular organisms → Bacteria	1953	Open in IMG/M
3300009012\|Ga0066710_100205983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2805	Open in IMG/M
3300009147\|Ga0114129_10531142	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1532	Open in IMG/M
3300009147\|Ga0114129_11173096	Not Available	958	Open in IMG/M
3300009792\|Ga0126374_10128616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Yersiniaceae → Serratia → Serratia nematodiphila → Serratia nematodiphila DZ0503SBS1	1496	Open in IMG/M
3300010043\|Ga0126380_10073859	All Organisms → cellular organisms → Bacteria	1946	Open in IMG/M
3300010043\|Ga0126380_10760840	Not Available	787	Open in IMG/M
3300010046\|Ga0126384_10311699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1298	Open in IMG/M
3300010046\|Ga0126384_11120319	Not Available	722	Open in IMG/M
3300010046\|Ga0126384_11196943	Not Available	701	Open in IMG/M
3300010047\|Ga0126382_11517841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	617	Open in IMG/M
3300010048\|Ga0126373_13064943	Not Available	521	Open in IMG/M
3300010358\|Ga0126370_10344376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1202	Open in IMG/M
3300010358\|Ga0126370_10844745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	821	Open in IMG/M
3300010358\|Ga0126370_11864237	Not Available	584	Open in IMG/M
3300010361\|Ga0126378_11263382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	834	Open in IMG/M
3300010366\|Ga0126379_11116806	Not Available	894	Open in IMG/M
3300010366\|Ga0126379_11776790	Not Available	721	Open in IMG/M
3300010398\|Ga0126383_10154076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2148	Open in IMG/M
3300010398\|Ga0126383_11025071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	914	Open in IMG/M
3300010398\|Ga0126383_12931921	Not Available	557	Open in IMG/M
3300012022\|Ga0120191_10002785	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1682	Open in IMG/M
3300012199\|Ga0137383_10072256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	2486	Open in IMG/M
3300012201\|Ga0137365_10115251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2021	Open in IMG/M
3300012201\|Ga0137365_10674268	Not Available	756	Open in IMG/M
3300012204\|Ga0137374_10030677	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5884	Open in IMG/M
3300012204\|Ga0137374_11287309	Not Available	505	Open in IMG/M
3300012205\|Ga0137362_10112058	Not Available	2307	Open in IMG/M
3300012205\|Ga0137362_10397821	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1193	Open in IMG/M
3300012207\|Ga0137381_10281615	All Organisms → cellular organisms → Bacteria	1447	Open in IMG/M
3300012208\|Ga0137376_10750052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	841	Open in IMG/M
3300012210\|Ga0137378_10010830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. th.b2	7912	Open in IMG/M
3300012285\|Ga0137370_10867488	Not Available	559	Open in IMG/M
3300012350\|Ga0137372_10970471	Not Available	596	Open in IMG/M
3300012354\|Ga0137366_10737658	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300012356\|Ga0137371_10267965	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1332	Open in IMG/M
3300012358\|Ga0137368_10387568	Not Available	920	Open in IMG/M
3300012362\|Ga0137361_11732560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	544	Open in IMG/M
3300012582\|Ga0137358_10332712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1029	Open in IMG/M
3300012917\|Ga0137395_10801778	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	682	Open in IMG/M
3300012948\|Ga0126375_10207740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1291	Open in IMG/M
3300012971\|Ga0126369_10691764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1096	Open in IMG/M
3300012971\|Ga0126369_11013512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	918	Open in IMG/M
3300012971\|Ga0126369_12593765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	592	Open in IMG/M
3300012971\|Ga0126369_13449225	Not Available	518	Open in IMG/M
3300016319\|Ga0182033_10570703	Not Available	980	Open in IMG/M
3300016341\|Ga0182035_10170071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia carboxidovorans	1695	Open in IMG/M
3300016341\|Ga0182035_11753541	Not Available	562	Open in IMG/M
3300016357\|Ga0182032_11664837	Not Available	556	Open in IMG/M
3300016387\|Ga0182040_11594346	Not Available	556	Open in IMG/M
3300016387\|Ga0182040_11963669	All Organisms → cellular organisms → Bacteria → Proteobacteria	502	Open in IMG/M
3300016404\|Ga0182037_11357979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	628	Open in IMG/M
3300016422\|Ga0182039_10820362	Not Available	827	Open in IMG/M
3300016422\|Ga0182039_12214547	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	507	Open in IMG/M
3300016445\|Ga0182038_10394899	Not Available	1158	Open in IMG/M
3300016445\|Ga0182038_11796581	Not Available	553	Open in IMG/M
3300018433\|Ga0066667_10391198	All Organisms → cellular organisms → Bacteria → Proteobacteria	1120	Open in IMG/M
3300018468\|Ga0066662_11506818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	700	Open in IMG/M
3300018482\|Ga0066669_10430992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1126	Open in IMG/M
3300021560\|Ga0126371_10768670	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1110	Open in IMG/M
3300021560\|Ga0126371_10925727	Not Available	1015	Open in IMG/M
3300025922\|Ga0207646_10672815	Not Available	927	Open in IMG/M
3300026277\|Ga0209350_1117801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	605	Open in IMG/M
3300026317\|Ga0209154_1261982	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300027646\|Ga0209466_1049279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	852	Open in IMG/M
3300027873\|Ga0209814_10011113	All Organisms → cellular organisms → Bacteria	3542	Open in IMG/M
3300027873\|Ga0209814_10094363	Not Available	1267	Open in IMG/M
3300027873\|Ga0209814_10307507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	691	Open in IMG/M
3300027873\|Ga0209814_10561857	Not Available	508	Open in IMG/M
3300027907\|Ga0207428_10984378	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300027909\|Ga0209382_10014391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9717	Open in IMG/M
3300028720\|Ga0307317_10194694	All Organisms → cellular organisms → Bacteria → Proteobacteria	684	Open in IMG/M
3300028791\|Ga0307290_10317985	Not Available	570	Open in IMG/M
3300028878\|Ga0307278_10508106	Not Available	526	Open in IMG/M
3300031543\|Ga0318516_10680691	Not Available	584	Open in IMG/M
3300031545\|Ga0318541_10186962	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1144	Open in IMG/M
3300031564\|Ga0318573_10386958	Not Available	751	Open in IMG/M
3300031572\|Ga0318515_10262529	All Organisms → cellular organisms → Bacteria	926	Open in IMG/M
3300031679\|Ga0318561_10318163	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	852	Open in IMG/M
3300031679\|Ga0318561_10330067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	835	Open in IMG/M
3300031680\|Ga0318574_10018875	Not Available	3323	Open in IMG/M
3300031681\|Ga0318572_10206226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1149	Open in IMG/M
3300031681\|Ga0318572_10808008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	557	Open in IMG/M
3300031724\|Ga0318500_10602244	Not Available	557	Open in IMG/M
3300031736\|Ga0318501_10181920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1094	Open in IMG/M
3300031771\|Ga0318546_10338741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1045	Open in IMG/M
3300031781\|Ga0318547_10324365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	938	Open in IMG/M
3300031890\|Ga0306925_10714592	Not Available	1047	Open in IMG/M
3300031890\|Ga0306925_11200181	Not Available	760	Open in IMG/M
3300031912\|Ga0306921_11707707	Not Available	680	Open in IMG/M
3300031912\|Ga0306921_11794535	Not Available	660	Open in IMG/M
3300031942\|Ga0310916_10200190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1671	Open in IMG/M
3300031942\|Ga0310916_10544787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	987	Open in IMG/M
3300031942\|Ga0310916_11633666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → unclassified Microvirga → Microvirga sp. VF16	522	Open in IMG/M
3300031945\|Ga0310913_10574022	Not Available	800	Open in IMG/M
3300031946\|Ga0310910_11177586	All Organisms → cellular organisms → Bacteria → Proteobacteria	595	Open in IMG/M
3300031947\|Ga0310909_10547780	Not Available	968	Open in IMG/M
3300031947\|Ga0310909_10737264	Not Available	817	Open in IMG/M
3300031947\|Ga0310909_11332510	Not Available	576	Open in IMG/M
3300031954\|Ga0306926_10145433	All Organisms → cellular organisms → Bacteria	2933	Open in IMG/M
3300031954\|Ga0306926_11184837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	898	Open in IMG/M
3300032001\|Ga0306922_10080674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3415	Open in IMG/M
3300032001\|Ga0306922_10545127	All Organisms → cellular organisms → Bacteria → Proteobacteria	1233	Open in IMG/M
3300032035\|Ga0310911_10346561	Not Available	857	Open in IMG/M
3300032041\|Ga0318549_10118283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1166	Open in IMG/M
3300032076\|Ga0306924_10729605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1110	Open in IMG/M
3300032076\|Ga0306924_11104468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	864	Open in IMG/M
3300032261\|Ga0306920_100078818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4842	Open in IMG/M
3300032261\|Ga0306920_100230701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2762	Open in IMG/M
3300033289\|Ga0310914_11157073	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	675	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.79%
Host-Associated	Host-Associated	11.95%
Engineered	Engineered	1.26%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.79%
Plants	Host-Associated → Plants	11.95%
Solid Waste	Engineered → Solid Waste	1.26%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	86.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.69%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.26%
Grass	Engineered → Solid Waste → Grass	1.26%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	74.84%
Loam	Environmental → Terrestrial → Soil → Loam	11.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.69%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.26%
Composting	Engineered → Solid Waste → Grass → Composting	1.26%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	34.59%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.69%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.43%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.26%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.26%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	1.26%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	15.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.47%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.32%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.69%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	10.06%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.66%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	5.03%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.26%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.26%
Sugar Cane Bagasse Incubating Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor	1.26%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.63%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.63%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.63%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000156	Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobic	Engineered	Open in IMG/M
3300000579	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A01	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006194	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1	Host-Associated	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012022	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C6	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
NODE_03631322	3300000156	Sugar Cane Bagasse Incubating Bioreactor	MAETFKCPHCGAVYEIRYEKAVSEDNRLAHCEVCGKQMDARNGSDIRHYELVKMPDGTNV
NODE_05249413	3300000156	Sugar Cane Bagasse Incubating Bioreactor	MPALWRSLYEVTYEKTISGDKGMANCQVCGKQMESRNGESIPHYELVKMPDGTNI*
AP72_2010_repI_A01DRAFT_10471303	3300000579	Forest Soil	IFEMAETFKCPHCGAVYEIRHDKAVSEDNRLAHCEVCGKQMDARTGSDIRHYELVKMPDGTNV*
AF_2010_repII_A1DRAFT_100458422	3300000597	Forest Soil	MAETFKCPRCGAVYQVTYDKAMSKDNRLAHCEVCGKQMDARNGSTIRHYELVKMPDGTNV
AF_2010_repII_A1DRAFT_100891481	3300000597	Forest Soil	ALYEITYEKIASDDKHSADCQVCGKQMDSTNGSRIPSYELVKMPDGTNV*
AF_2010_repII_A1DRAFT_101063623	3300000597	Forest Soil	LYEITYEKTDADDNHAADCQVCGKRMDSSNSSNIPCYELVKMPDGTSV*
AF_2010_repII_A1DRAFT_101103422	3300000597	Forest Soil	MAETFRCPHCRALYEIRYDKGVTDDNHLAHCQVCGKQMDARNGSSIRHYELVKMPDGTNV
AF_2010_repII_A100DRAFT_10221192	3300000655	Forest Soil	MAETFKCPHCGAGYEIGYDKAVSEDNRLAHCEVCGKQMDARNGSDIRHYELVKMPDGTNV
AF_2010_repII_A100DRAFT_10296903	3300000655	Forest Soil	LYEITYEKIASDDKHSADCQVCGKQMDSTNGSSIPCYELVKMPDGTNV*
JGI11643J11755_117910052	3300000787	Soil	MAKTFKCPHCGALYEIITDEKTVSEDKDAADCRVCGKRMDVTKGSSILRYELVKMPDGTNV*
AF_2010_repII_A001DRAFT_100915402	3300000793	Forest Soil	MAETFRCPHCRALYEIRYDKGVTDDNRLAHCQVCGKQMDARNGSSIRHYELVKMPDGTNV
JGI10216J12902_1008736723	3300000956	Soil	MSKTFKCPHCGALYEIITDEKTVSEDKDAADCRVCGKRMDVTKGSSILRYELVKMPDGTNV*
JGI10216J12902_1033185674	3300000956	Soil	MAETFKCPHCGALYEIIADEKTVSNDKDAADCRVCGKQMDVSKGSSILRYELVKMPDGTNV*
JGI10216J12902_1053423583	3300000956	Soil	MAETFKCPQCGAAYQVTYDKAMFKDNRPAHCEVCGKQMDARKSSTLRHYELVKMPDGTNV
JGI12053J15887_101841702	3300001661	Forest Soil	MMVPRFANTRRRCRLEAETYPAYICRMPETFKCPDCGALYKIIVEKTISRDKNAADCLVCGKQMDSGNGSIIPHYELVKMPDGTDV*
JGI25390J43892_101616082	3300002911	Grasslands Soil	MAETFKCPHCGALYEIIAHERTVSDDKDVADCQVCGKRINATSGSRILRYELVRM
Ga0066397_101389892	3300004281	Tropical Forest Soil	TFRCPHCRALYEISYDKGVTDDNRLAHCQVCGKQMDARNGSSIRHYELVKMPDGTNV*
Ga0062595_1010344331	3300004479	Soil	TWSGYVHAMAKTFKCPHCGALYEIITDEKTVSEDKDAADCRVCGKRMDVTKGSSILRYELVKMPDGTNV*
Ga0066672_105266323	3300005167	Soil	MAETFKCPHCGALYEIIAHERTVSDDKDVADCQVCGKRINATSGSRILRYELVRMPDGTNV*
Ga0065707_102730411	3300005295	Switchgrass Rhizosphere	MAETFKCPHCGALYEIISDEKIVSEYTGAADCRLCGKQMDVTKGSNLRYELVQMPDGTNV
Ga0066388_1004406181	3300005332	Tropical Forest Soil	PHCRALYEIRYDKGVTDDNRLAHCQVCGKQMDARNGSSIRYYELVKMPDGTNV*
Ga0066388_1016328973	3300005332	Tropical Forest Soil	MYIFQMTETFKCPQCGALYEIRHDKAVSDDNPPGDCQICGKQMDARNGSSIWCYELIRMPDGTNV*
Ga0066388_1026403443	3300005332	Tropical Forest Soil	AVYEIRYDKAVSEDNRLAHCEVCGKQMDARTGSDIRHYELVKMPDGTNV*
Ga0066388_1069505131	3300005332	Tropical Forest Soil	MAETFRCPHCRALYEIGYDKGVTDDNRLAYCQVCGKQMDARNGSSIRHYELVKMPDS
Ga0070706_1013051471	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MAETFKCPHCGAVYEIRYDKAVSEDNRLAHCEVCGKQMDARNGSDIRHYELVKMPDGTNV
Ga0066695_106765691	3300005553	Soil	MAETFKCPHCGALYEITCEKTVSHDKGSPHCQVCGKQMNSRNGSIIRRYELVKMPDGTNV
Ga0066670_102795781	3300005560	Soil	MSETFKCPCGALYEVTHEKTISRDKQAAACQVCGKQMDSRNGLSIPHYELVKMPDGTNV*
Ga0066905_1008582632	3300005713	Tropical Forest Soil	MAEPFKCPHCGALYEIIRYEKAVPHDKDAADCQVCGKQMDLTNGSSIPHYELVKMPDGTNV*
Ga0066903_1006298644	3300005764	Tropical Forest Soil	MAETFKCPHCGAVYEIRHDKAVSEDNRLAHCEVCGKQMDARTRSDIRHYELVRMPDGTNV
Ga0066903_1008293612	3300005764	Tropical Forest Soil	MYIFQMTETFKCPQCGALYEIRHDKAVSDDNPPADCQICGKQMDARNGSSIRCHELIKMPDGTNV*
Ga0066903_1015171873	3300005764	Tropical Forest Soil	MAETFKCSRCGAVYQVTYDKAMSKDNRLAHCEVCGKQMDARNGSTIQHYELVKMPDGTNV
Ga0066903_1025936961	3300005764	Tropical Forest Soil	MAETFKCPRCGAVYQVTYDKVMSKDNRLAHCEVCGKQMDARNGSTIRHYELVKMPDG
Ga0066903_1027991952	3300005764	Tropical Forest Soil	MAETFKCPHCRAVYEIRHHKAVSEDNRLAHCEVCGKQMDARNGSDIRYYELVKMPDGTNV
Ga0066903_1031791652	3300005764	Tropical Forest Soil	MAETLKCPHCGALYEIIRYEKAVPHDKDAADCQVCGKLMDLTNGSSIPHYELVKMPDGTNV*
Ga0066903_1052455902	3300005764	Tropical Forest Soil	MAETFKCPHCGAVYEIRHDQAVSEDNRLAHCEVCGKHMDARTGSDIRHYELVKMPDGTNV
Ga0066903_1059506812	3300005764	Tropical Forest Soil	VIHARRANVIFEMGETCRCPHCRALYEIRYDKGVTDDNRLAHFQVCGKQMDARNGSSIRYYEPVKMPDGTNV
Ga0066903_1077240571	3300005764	Tropical Forest Soil	MAETFKCPHCGAVYEIRHDKAVSEDNRLAHCEVCGKQMDARNGSDIRHYELVKMPDGT
Ga0081455_1000015171	3300005937	Tabebuia Heterophylla Rhizosphere	MADTFKCPHCGALYEVIAHERTVSDDKDVADCQVCGKRMHATEGSRILHYELVRMPDGTNV*
Ga0081455_105388872	3300005937	Tabebuia Heterophylla Rhizosphere	SLEAETWSRYIYPMAETFKCPHCGALYEIITDDKTVSEDKDAADCRVCGKQMDVTKGSSILRYELVKMPDGTNV*
Ga0075417_101428333	3300006049	Populus Rhizosphere	MTETFKCPHCGALYEIIAHEKTVSDDKNAAECKVCGKRMSMTNGSRILNYELVRMPDGTNV*
Ga0075427_100749333	3300006194	Populus Rhizosphere	MTETFKCPHCGALYEIIAHEKTVSDDKNAAECKVCGKRMSVTNGSRILNYELVRMPDGTNV*
Ga0066653_100900521	3300006791	Soil	MAETFKCPHCGALYEIIAHERTVSDDKDAADCQVCGKRMDATNGSRILRYELVRMPDGTNV*
Ga0079221_108787562	3300006804	Agricultural Soil	MAETFKCPHCGAVYEIRYDKAVSEGNRLAYCEVCGKQMDSSNGSGIPHYELVKMPDGTNV
Ga0075428_1006197963	3300006844	Populus Rhizosphere	MTETFKCPHCGALYEIIAHEKTVSDDKNAAECKVCGKRMSVTNGPRILNYELVRMPDGTNV*
Ga0075428_1010099042	3300006844	Populus Rhizosphere	MAETFKCPHCGALYEIISDEKIVSEDTGAAYCRLCGKQMDVTKGSNLRYELVQMPDGTNV
Ga0075421_1027389122	3300006845	Populus Rhizosphere	MAKTFKCPHCGALYEIITDEKTVSEDKDAADCRVCGKQMDVTKGSSILSYELVKMPDGTNV*
Ga0075420_1002974643	3300006853	Populus Rhizosphere	MTETFKCPHCGALYEIIAHEKTVSDDKNAAECKVCGKRMSMTNGSRILNYELVRMPDGTN
Ga0075425_1015240791	3300006854	Populus Rhizosphere	HPMAETFKCPHCGALYEIITDEKTVSEDKDAADCRVCGKQMDVTKGSSILSYELVKMPDGTNV*
Ga0075424_1001344602	3300006904	Populus Rhizosphere	MAETFKCPHCGALYEIITDEKTVSEDKDAADCRVCGKQMDVTKGSSILSYELVKMPDGTNV*
Ga0075435_1001509304	3300007076	Populus Rhizosphere	MAETFKCPHCGALYEIITDEKTVSEDKDAADCRVCGKRMDVTKGSSILRYELVKMPDGTNV*
Ga0066710_1002059832	3300009012	Grasslands Soil	MAETFKCPHCGALYEIIAHERTVSDDKDVADCQVCGKRINATSGSRILRYELVRMPDGTN
Ga0114129_105311422	3300009147	Populus Rhizosphere	MAETFKCPHCGALYEIVTYERTVSDNKDAANCQVCGKRMGSADGSSIRHYELVKMPDGTNV*
Ga0114129_111730962	3300009147	Populus Rhizosphere	MAESFKCPHCGALYEIIADEKTVSNDKDAADCRVCGKQMDVSKGSSILRYELVKMPDGTNV*
Ga0126374_101286162	3300009792	Tropical Forest Soil	MDETFKCPYCGALYEITYEKIASDDTHSADRQVCGKQMDSTNGSRIPCYELVKMPDGTNV
Ga0126380_100738594	3300010043	Tropical Forest Soil	MAETFKCPHCGAVYEIRHDKVVSEDNRLAHCEVCGKQMDARNGSDIRHYELVKMPDGTNV
Ga0126380_107608401	3300010043	Tropical Forest Soil	MAQTFQCPRCGAVYQVTYDKAMSKDNRLAHCEVCGKQMDARNGSTIRHYELVKMPDGTNV
Ga0126384_103116994	3300010046	Tropical Forest Soil	PHCGAVYEIRHDKAVSEDNRLAHCEVCGKQMDARTGSDIRHYELVKMPDGTNV*
Ga0126384_111203191	3300010046	Tropical Forest Soil	MYIFQMTETFKCPQCGALYEIRHDKAVSDDNLSADCQICGEQMDARNGSSIRCYELIKMPDGTNV*
Ga0126384_111969432	3300010046	Tropical Forest Soil	MAETFKCPHCGALYEIITDEKTASDDKDAADCRVCGKQMDVAKGWSILRYELVKMPGGTNV*
Ga0126382_115178412	3300010047	Tropical Forest Soil	EMAETFRCPHCRALYEIRYDKGVTDDNRLAHCQVCGKQMDARNGSSIRHYELVKMPDGTNV*
Ga0126373_130649432	3300010048	Tropical Forest Soil	MAEIFKCPHCGAGYEIRYDKAVSEDNRLAHCEVCGKQMDARNGSDIRHYELVKMPDGTNV
Ga0126370_103443762	3300010358	Tropical Forest Soil	MYIFQMTETFKCPQCGALYEIRHDKAVSDDNPPADCQICGKQMDARNGSSIRCYELIKMPDGTNV*
Ga0126370_108447452	3300010358	Tropical Forest Soil	MAETFKCPHCGAVYEIRHDKAVSEDNRLAHCEVCGKQMDARTGWDIRHYELVKMPDGTNV
Ga0126370_118642372	3300010358	Tropical Forest Soil	MAETLKCPHCGALYEIIRYEKAVPHDKDAADCQVCGKQMDLTNGSSIPHYELVKMPDGTNV*
Ga0126378_112633822	3300010361	Tropical Forest Soil	MAETFKCPHCGALYEIIRYEKAVPHDKDAADCQVCGKQMDLTNGSSIPHYELVKMPDGTNV*
Ga0126379_111168061	3300010366	Tropical Forest Soil	MYIFQMTETFKCPQCGALYEIRHDKAVSDDNPPADCQICGKQMDARNDSSIRCYELIKMPDGTNV*
Ga0126379_117767901	3300010366	Tropical Forest Soil	MAETFKCPHCGAGYEIRYDKAVSEDNRLAHCEVCGKQMDARNGSDIRHYELVKMPDGTNV
Ga0126383_101540763	3300010398	Tropical Forest Soil	MAETFKCPHCGAVYEIRHDKVVSEDNRLAHCEVCGKQMDARNGSDIRYYYKLVKMPDGTNV*
Ga0126383_110250712	3300010398	Tropical Forest Soil	MAETFKCPHCGAVYEIRYDKAVYEDNRLAHREVCGKRMDARNGSDIRHYELVKMPDGTNV
Ga0126383_129319211	3300010398	Tropical Forest Soil	MAETFKCPHCGAVYEIRHDKAVSEDNRLAHCEVCGKQMDARTGSDIRHYELVKM
Ga0120191_100027852	3300012022	Terrestrial	MTETFKCPHCGALYEIIAHEKTVSDDKNTAECKVCGKRMSVTNGSRILNYELVRMPDGTNV*
Ga0137383_100722563	3300012199	Vadose Zone Soil	MAETFKCPHCGALYEIIRYEKAVPHDKDAADCQVCGKQMDMTNGSSIPHYELVKMPDGTNV*
Ga0137365_101152513	3300012201	Vadose Zone Soil	MAETFKCPHCGALYEIIAHERTVSDDKDVADCQVCGKRINATNGSRILRYELVRMPDGTNV*
Ga0137365_106742681	3300012201	Vadose Zone Soil	MAETFKCPHCGALYEIIRYEKAVPHDKDAADCQVCGKQMDMTSGSSIPHYELVKMPDGTNV*
Ga0137374_100306772	3300012204	Vadose Zone Soil	MAETFKCPHCGALYEIIAHERTVSDDKDVADCQVCGRRMDATNGSRILRYELVRMPDGTNV*
Ga0137374_112873091	3300012204	Vadose Zone Soil	MTETFKCPHCGALYEIIAHEKTVSDDKNAAQCKVCGKRMSVPNGSRILNYELVRMPDGTNV*
Ga0137362_101120581	3300012205	Vadose Zone Soil	CGAVYEIRYDKAVSEDNRLAYCEVCGKQMDARNGSDIRHYELVKMPDGTNV*
Ga0137362_103978212	3300012205	Vadose Zone Soil	MPQTHNARIVGALYEVVYEKTISGDKRTANCQVCGKQMNSRNGSGIPHYELVKMPDGTNV
Ga0137381_102816153	3300012207	Vadose Zone Soil	MAETFKCPHCGALYEIIRYEKAVPHDKDAAECQVCGKQMDMTNGSSIPHYELVKMPDGTNV*
Ga0137376_107500522	3300012208	Vadose Zone Soil	MAETFKCPHCGAVYEIRYDKAVYEGNRLAYCEVCGKQMDARNGSDIRHYELVKMPDGTNV
Ga0137378_100108307	3300012210	Vadose Zone Soil	MAETFKCPHCGALYEIIRYEKAVPHDKDAADCQVCGKQMDTTNGSSIPHYELVKMPDGTNV*
Ga0137370_108674882	3300012285	Vadose Zone Soil	MAEPFKCPHCGALYDIIADEKTVSDDKDAAECQVCGKQMDVTTGSSILRYELVKTPDGTNV*
Ga0137372_109704711	3300012350	Vadose Zone Soil	MAETFKCPHCGALYEIIRYEKAVPHDKDAADCQVCGKQMDMTNGSSIPDYELVKMPDGTNV*
Ga0137366_107376582	3300012354	Vadose Zone Soil	MAETFKCPHCGALYEIIAHERTVSDDKDVADCQVCGRRMDATSGSRILRYELVRMPDGTNV*
Ga0137371_102679652	3300012356	Vadose Zone Soil	MPQTHKCPHCGALYEVVYEKTISGDKRTANCQVCGKQMDSRNGSGPHYELVKMPDGTNV*
Ga0137368_103875682	3300012358	Vadose Zone Soil	MTETFKCPHCGALYEIIAHEKTVSDDKNAAQCKVCGKRMSVTNGSRILNYELVRMPDGTNV*
Ga0137361_117325601	3300012362	Vadose Zone Soil	MAETFKCPHCGAVYEIRYDKAVSEDNRLAYCEVCGKQMDARNGSDIRHYELVKMPDGTNV
Ga0137358_103327122	3300012582	Vadose Zone Soil	MAETFKCPHCGAVYEIRYDKAVSEGNRLAYCEVCGKQTDARNGSDIRHYELVKMPDGTNV
Ga0137395_108017782	3300012917	Vadose Zone Soil	MPQTHKCPHCGALYEVVYEKTISGDKRTANFQVCGKQMDSRTGSGIPHYELVKMPDGTNV
Ga0126375_102077401	3300012948	Tropical Forest Soil	EYIFEMAETFKCPHCGAVYEIRYDKAVSEDNRLAHCEVCGKRMDARNGSDIRHYELVKMPDGTNV*
Ga0126369_106917643	3300012971	Tropical Forest Soil	MAETFKCPHCGAVYEIRYDKAVSEGNLAYCEVCGKQMDARNGSDIRHYELVKMPDGTNV*
Ga0126369_110135122	3300012971	Tropical Forest Soil	MAEIFKCPHCGAGYEIRYDKAVSEDNRLAHCEVCGKQMDARNGSDIRHYELVKMPDGTQV
Ga0126369_125937651	3300012971	Tropical Forest Soil	MYIFQMTETFKCPQCGALYEIRHDKAVSDDNPPADCQICGKQMDARNGSSIRCYELIK
Ga0126369_134492251	3300012971	Tropical Forest Soil	MAETFKCPHCGAVYEIRHDKAVSEDNRLANCEVCGKQMDARNGSDIRHYELVKMPDG
Ga0182033_105707032	3300016319	Soil	YEVTYEKTISGDKGMANCQVCEQMESSRNGESIPHYELVKMPDGTNV
Ga0182035_101700711	3300016341	Soil	MAETFKCPHCGAVYEIRHDKAVSEDNRLAYCEVCGKQMDARNGSDIRH
Ga0182035_117535412	3300016341	Soil	VYEIRHDKAVSEDNRLAHCEVCGKQMDARNGSSIRHYELVKMPDGTNV
Ga0182032_116648371	3300016357	Soil	MAETFRCPHCRALYEIRYDKGVTDANRLAHCQVCGKQMDARNGSSIRYYELVK
Ga0182040_115943461	3300016387	Soil	MAETFKCPHCGAVYEIRYDKAVSEDNRLAHCEVCGKRMDANGSDIRHYELVKMPDGTSV
Ga0182040_119636692	3300016387	Soil	GALYEIRYEKTAFHDKSAADCQVCGKHMASTEGSIVPQYELIRLPDGTNV
Ga0182037_113579791	3300016404	Soil	TFKCPHCGAVYEIRHDKAVSEDNRLAHCEVCGKQMDARTGSDIRHYELVKMPDGTNV
Ga0182039_108203622	3300016422	Soil	MAETFKCPHCGVVYEIRYDKAVSEDNRLAHCEVCGKQMDARTGSDIRHYE
Ga0182039_122145471	3300016422	Soil	PHCGAVYEIRYDKAVSEDNRLAHCEVCGKQMDTRNGSDIRHYELVKMPDGTNV
Ga0182038_103948991	3300016445	Soil	KCPHCGAVYEIRHDKAVSEDNRLVHCEVCGKQMDARNGSDTRHYELVKMPDGTNV
Ga0182038_117965811	3300016445	Soil	MAETFKCPHCGAVYEIRYDKAVSEDNRLAHCEVCGKQMDARNGSDIRHYELVKMPD
Ga0066667_103911981	3300018433	Grasslands Soil	MAETFKCPHCGALYEIIAHERTVSDDKDVADCQVCGKRINATSGSRILRYELVRMPDGPN
Ga0066662_115068181	3300018468	Grasslands Soil	MAETFKCPHCGAVYEIRYDKAVSEGNRLAYCEVCGKQMDARNGSDIRHYELVKMPDGTNV
Ga0066669_104309922	3300018482	Grasslands Soil	MAETFKCPHCGALYEIIAHERTVSDDKDVADCQVCGKRINATNGSRILRYELVRMPDGTN
Ga0126371_107686701	3300021560	Tropical Forest Soil	LYEITYEKTDADDNHAADCQVCGKRMDSSNSSNIPCYELVKMPDGTRV
Ga0126371_109257271	3300021560	Tropical Forest Soil	MYIFQMTETFKCPQCGALYEIRHDKAVSDDNPPADCQICGKQMDARNGSSIRCYELIKMPDGTNV
Ga0207646_106728151	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MAETFKCPHCGALYEIIRYEKAVPHDKDAADCQVCGKQMDMTNGSSIPHYELVKMPDGTN
Ga0209350_11178012	3300026277	Grasslands Soil	MAETFKCPHCGALYEIIAHERTVSDDKDVADCQVCGKQMDSTKGSSIPCYELVKMPDSTN
Ga0209154_12619822	3300026317	Soil	AETFKCPHCGALYEIIAHERTVSDDKDVADCQVCGKRINATSGSRILRYELVRMPDGTNV
Ga0209466_10492791	3300027646	Tropical Forest Soil	TFKCPHCGAVYEIRYDKAVSEDNRLAHCEVCGKQMDARNGSDIRHYELVKMPDGTNV
Ga0209814_100111136	3300027873	Populus Rhizosphere	MAKTFKCPHCGALYEIITDEKTVSEDKDAADCRVCGKRMDVTKGSSILRYELVKMPDGTN
Ga0209814_100943632	3300027873	Populus Rhizosphere	MAETFKCPHCGALYEIISDEKIVSEDTGAADCRLCGKQMDVTKGSNLRYELVQMPDGTNV
Ga0209814_103075071	3300027873	Populus Rhizosphere	MTETFKCPHCGALYEIIAHEKTVSDDKNAAECKVCGKRMSVTNGSRILRY
Ga0209814_105618571	3300027873	Populus Rhizosphere	MAETFKCPHCGALYEIITDEKTVSEDKDAADCRVCGKQMDVTKGSSILSYELVKMPDGTN
Ga0207428_109843781	3300027907	Populus Rhizosphere	TSLDADTWSGYVHAMAKTFKCPHCGALYEIITDEKTVSEDKDAADCRVCGKRIDVTKGSSILRYELVKMPDGTNV
Ga0209382_100143913	3300027909	Populus Rhizosphere	MTETFKCPHCGALYEIIAHEKTVSDDKNAAECKVCGKRMSVTNGPRILNYELVRMPDGTN
Ga0307317_101946941	3300028720	Soil	MAEPFKCPHCGALYDIIADEKTVSDDKDAAECQVCGKQMDVTTGSSILRYELVKMPDGTN
Ga0307290_103179851	3300028791	Soil	QTWSRYIHPMAEPFKCPHCGALYDIIADEKTVSDDKDAAECQVCGKQMDVTTGSGILRYELVKMPDGTNV
Ga0307278_105081062	3300028878	Soil	IFVSMTETFKCPHCGALYEIIAHEKTVSDDKNAAQCKVCGKRMSVTNGSRILNYELVRMPDGTNV
Ga0318516_106806912	3300031543	Soil	MAETFKCPHCGALYEIIRYEKAVPHDKDAADCQVCGKQMDLTNGSSIPHYELVKMPDGTN
Ga0318541_101869622	3300031545	Soil	MAETFKCPHCGALYEIVRYEKAVPHDKDAADCQVCGKQMDLTNGSSIPHYELVKMPDGTN
Ga0318573_103869582	3300031564	Soil	MAETFKCPHCGAVYEIKYDKVVSEDNRLAHCEVCGKQMDARNGSDIRHYELVKMPDGTNV
Ga0318515_102625291	3300031572	Soil	MAETFKCPHCGAVYEIRHDKAVSEDNRLAHCEVCGKQMDARTGSDIRHYELVKMP
Ga0318561_103181631	3300031679	Soil	MAETFKCPHCGAVYEIRHDKAVSEDNRLAHCEVCGKQMDARTGSDIRHYE
Ga0318561_103300672	3300031679	Soil	FKCPHCGAVYEIRHDKAVSEDNRLAHCEVCGKQMDARTGSDIRHYELVKMPDGTNV
Ga0318574_100188755	3300031680	Soil	MAETFKCPHCGALYEIIRYEKAVPHDKDAADCRVCGKQMDLTNGSSIPHYELVKMPDGTN
Ga0318572_102062262	3300031681	Soil	MAETFKCPHCGAVYEIRHDKAVSEDNRLAHCEVCGKQMGARNGSDIRHYELVKMPDGTNV
Ga0318572_108080082	3300031681	Soil	SQGTLYEIIRYEKAVPHDKDAADCQVCGKQMDLTNGSSIPHYELVKMPDGTNV
Ga0318500_106022441	3300031724	Soil	YIFEMAETFKCPHCGAVYEIRYDKAVSEDNRLAHCEVCGKRMDANGSDIRHYELVKMPDGTSV
Ga0318501_101819203	3300031736	Soil	MAETVKCPHCGALYEIRYEKTAFHDKSAADCQVCGKHMASTEGSIVPHYELVT
Ga0318546_103387413	3300031771	Soil	MAETFRCPHCRALYEIRYDKGVTDDNRLAHCQVCGKQMDARNGSSIRYYELVKMTDG
Ga0318547_103243653	3300031781	Soil	VYEIRYDKAVSEDNRLAHCEVCGKQMDTRNGSDIRHYELVKMPDGTNV
Ga0306925_107145923	3300031890	Soil	CGALYEIKYEKTAFHDKSAADCQVCGKHMASTEGSIVPHYELIRMLDGTNV
Ga0306925_112001812	3300031890	Soil	EMAETFKCPHCGAVYEIKYDKVVSEDNRLAHCEVCGKQMDARNGSDIRHYELVKMPDGTN
Ga0306921_117077072	3300031912	Soil	MAETFKCPHCGAVYEIRHDKAVSEDNRLAHCEVCGKQMDARNGSDIRYYELVKMPDGTNV
Ga0306921_117945351	3300031912	Soil	MAETFKCPHCGAVYEIKYDKVVSEDNRLAHCEVCGKQMDARNGSDIRHYELVK
Ga0310916_102001902	3300031942	Soil	MAETVKCPHCGALYEIKYEKTAFHDKSAADCQVCGKHMASTEGSIVPHYELIRMLDGTNV
Ga0310916_105447872	3300031942	Soil	MAETSKCPHCGAVYEIRHDKAVSEDNRLAHCEVCGKQMDARTGSDIRHYELVKMPDGTNV
Ga0310916_116336662	3300031942	Soil	PHCGALYEIIRYEKAVPHDKDAADCQVCGKQMDLTNGSSIPHYELVKMPDGTNV
Ga0310913_105740222	3300031945	Soil	MAETFQCPHCGAVYEIRYDKAVSEDNRLAYCEVCGKQMDARNGSDIRHYELVKMPDDTNV
Ga0310910_111775861	3300031946	Soil	KCPHCGALYEITYRNVSHDKDEAHCQVCGKQMVSTTGSSIASYELVSMPDGTNV
Ga0310909_105477803	3300031947	Soil	HCGAVYEIRHDKAVSEDNRLAHCEVCGKQMDARNGSDIRYYELVKMPDGTNV
Ga0310909_107372642	3300031947	Soil	MAETFKCPHCGAVYEIRYDKAVSEDNRLAHCEVCGKQMDTRNGSDIRHY
Ga0310909_113325102	3300031947	Soil	IFEMAETFKCPHCGAVYEIRYDKAVSEDNRLAHCEVCGKQMDARNGSDIRHYELVKMPDGTNV
Ga0306926_101454333	3300031954	Soil	MAETFKCPHCGAVYEIRHDKAVSEDNRLAHCEVCGKQMGTRNGSDIRHYELVKMPDGTNV
Ga0306926_111848373	3300031954	Soil	MAETFKCPHCGAVYEIRYDKAVSEDNRLAHCEVCGKQMDTRNGSDIRHYELVKMPDGTNV
Ga0306922_100806744	3300032001	Soil	MAETFKCPHCGAVYEIRHDKAVSEDNRLAHCEVCGKQMDARNGSDTRHYELVKMPDGTNV
Ga0306922_105451271	3300032001	Soil	YEIRYEKTAFHDKSATDCQVCGKHMASTEGSSVPHYELVRMPDDTNV
Ga0310911_103465612	3300032035	Soil	GALYEIRYEKTAFHDKSAADCQVCGKHMASTEGSIVPHYELVTMPDGTDV
Ga0318549_101182834	3300032041	Soil	EMAETFKCPHCGAVYEIRHDKAVSEDNRLAHCEVCGKQMDARTGSDIRHYELVKMPDGTN
Ga0306924_107296052	3300032076	Soil	MAETFKCPHCGAVYEIKYDKVVSEDNRLAHCEVCGKQMDARNGSDIRHYELVKMP
Ga0306924_111044681	3300032076	Soil	KCPHCGAVYEIRYDKAVSEDNRLAHCEVCGKQMDTRNGSDIRHYELVKMPDGTNV
Ga0306920_1000788189	3300032261	Soil	MAETFKCPHCGAVYEIRYDKAVSEDNRLAYCEVCGKQMDARNGSDIRHYELVKMPDDTNV
Ga0306920_1002307011	3300032261	Soil	MAETFKCPHCGAVYEIKYDKVVSEDNRLAHCEVCGKQMDARNGSDIRHYEL
Ga0310914_111570732	3300033289	Soil	GALYQVTYEKIVSPNKAAANCQVCGKQMDSANGSSIPCYELVKMPDGTNV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F041858

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences